Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,467,322 |
A→G |
C57R (TGC→CGC) |
yheB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,467,322 | 0 | A | G | 100.0%
| 639.7
/ NA
| 184 | C57R (TGC→CGC) | yheB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (52/132); total (52/132) |
Only 100 of 190 total aligned reads displayed.
TATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCAATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATG > NC_000913/3467232‑3467411
|
tATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAt > 1:1082326/1‑93 (MQ=255)
tATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAt < 2:698170/93‑1 (MQ=255)
aTTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAtt > 2:3072854/1‑93 (MQ=255)
ttGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAttt > 2:5607803/1‑93 (MQ=255)
tGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTg > 1:2124830/1‑93 (MQ=255)
gCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGt > 2:495011/1‑93 (MQ=255)
ccAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTa < 2:5161838/93‑1 (MQ=255)
cAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTag > 1:6030641/1‑93 (MQ=255)
aaCTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTagaa < 2:880608/93‑1 (MQ=255)
aaCTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTagaa < 1:6288136/93‑1 (MQ=255)
gACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGaaa < 2:853053/93‑1 (MQ=255)
gACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGaaa > 1:3011437/1‑93 (MQ=255)
gACTAATTTCAGCAGCTGTTGCGGGACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGaaa > 2:2201694/1‑93 (MQ=255)
aCTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAAc > 1:6130274/1‑93 (MQ=255)
aCTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAAc > 1:5486904/1‑93 (MQ=255)
cTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACAGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAAcc < 2:5062578/93‑1 (MQ=255)
tAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGATGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAAccc < 2:4895083/93‑1 (MQ=255)
aTTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACccac < 2:782433/93‑1 (MQ=255)
aTTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACccac < 1:2464380/93‑1 (MQ=255)
tttCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACccacc > 1:6403339/1‑93 (MQ=255)
tttCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACccacc < 1:2128905/93‑1 (MQ=255)
tttCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACccacc > 1:4879878/1‑93 (MQ=255)
ttCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACccacca < 2:2103621/93‑1 (MQ=255)
tCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAg < 1:906236/93‑1 (MQ=255)
tCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAg < 2:5877804/93‑1 (MQ=255)
tCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAg < 2:4670144/93‑1 (MQ=255)
cagcagCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAgg < 1:2032527/93‑1 (MQ=255)
cagcagCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAgg < 2:1898254/93‑1 (MQ=255)
agcagcTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGc > 1:4835753/1‑93 (MQ=255)
agcTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCAtt > 1:1680122/1‑93 (MQ=255)
cTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCAtttt > 2:1188789/1‑93 (MQ=255)
tGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTc > 2:6117005/1‑93 (MQ=255)
tGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATa > 2:2612932/1‑93 (MQ=255)
gCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATaa < 2:3842375/93‑1 (MQ=255)
gCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATaa < 1:3999267/93‑1 (MQ=255)
cGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATaaa < 2:689928/93‑1 (MQ=255)
cGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATaaa > 1:1861040/1‑93 (MQ=255)
ggTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAt < 2:5231135/93‑1 (MQ=255)
ggTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAt < 1:4282868/93‑1 (MQ=255)
gTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCTCGGGCGATTTGTAGAAGAAACCCACCATGCATTTTCATAAAtt > 2:2713236/1‑93 (MQ=255)
gTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAtt > 1:6242761/1‑93 (MQ=255)
gTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAtt > 2:2278257/1‑93 (MQ=255)
gTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAtt > 1:756628/1‑93 (MQ=255)
gTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAtt < 1:5858993/93‑1 (MQ=255)
gTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAtt < 2:1499392/93‑1 (MQ=255)
aCGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAAtttt < 2:1987810/93‑1 (MQ=255)
cGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTg < 2:3838428/93‑1 (MQ=255)
tttAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCa < 1:2290586/93‑1 (MQ=255)
aCGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGaa > 2:1686271/1‑93 (MQ=255)
cGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGaaa < 2:2534818/93‑1 (MQ=255)
cGCCACGGATTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGaaa > 2:6321309/1‑93 (MQ=255)
gCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGaaaa < 1:2564591/93‑1 (MQ=255)
ccACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAAt > 2:5630917/1‑93 (MQ=255)
cACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATa > 2:2447867/1‑93 (MQ=255)
ggTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCt < 2:4819102/93‑1 (MQ=255)
gTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTg < 2:6389133/93‑1 (MQ=255)
ttAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGa < 2:4004867/93‑1 (MQ=255)
ttAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGa < 2:5210824/93‑1 (MQ=255)
ttAGTTGCATCATTTGCTTTCGCTTTCCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGa < 1:5094861/93‑1 (MQ=255)
tAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGat < 2:1545858/93‑1 (MQ=255)
tAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGat < 1:1723894/93‑1 (MQ=255)
aGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGata < 2:6055957/93‑1 (MQ=255)
aGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGata < 1:3349408/93‑1 (MQ=255)
gTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAATCCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGatat < 2:2240476/93‑1 (MQ=255)
ttGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAtatt < 1:253504/93‑1 (MQ=255)
gCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAGCCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAtattta < 2:331076/93‑1 (MQ=255)
atcatTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAtatttatt < 1:2813850/93‑1 (MQ=255)
atcatTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAtatttatt < 1:3992025/93‑1 (MQ=255)
tcatTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATttatta < 2:1434603/93‑1 (MQ=255)
tcatTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATttatta < 1:2273079/93‑1 (MQ=255)
tcatTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATttatta < 2:4457074/93‑1 (MQ=255)
tcatTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATttatta > 2:3648483/1‑93 (MQ=255)
catTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTac < 1:5712278/93‑1 (MQ=255)
catTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTac > 1:4608284/1‑93 (MQ=255)
tttGCTTTCGCTTTTCCCGGGCGATGTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTacca < 1:842818/93‑1 (MQ=255)
cTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCtt > 2:1078309/1‑93 (MQ=255)
cTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCtt > 1:4381766/1‑93 (MQ=255)
cTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCtt < 2:3276721/93‑1 (MQ=255)
tttCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCttt > 2:2520795/1‑92 (MQ=255)
tttCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCttg > 2:6173165/1‑93 (MQ=255)
ttCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCttgt < 1:3980224/93‑1 (MQ=255)
ttCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCttgt < 1:605798/93‑1 (MQ=255)
ttCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCttgt < 2:3423369/93‑1 (MQ=255)
ttCGCTTTTCCCGGGCGATTTGTAGAAGAAACCAACCAGGCATTTTCATAAATTGTGCCATCGAAAATAACCTGATATTTATTACCACCttgt < 1:4665464/93‑1 (MQ=255)
tCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCttgtt < 2:2851737/93‑1 (MQ=255)
tCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCttgtt < 2:1014597/93‑1 (MQ=255)
cGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCttgttg < 2:4074633/93‑1 (MQ=255)
gCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTgg < 1:1464745/93‑1 (MQ=255)
cTTTTCCCGGGCGAGGTGTAGAAGAACCCCACCAGGCATTTTCATAAATGTTGCCATGGAAAATAACCTGATATTTATGACCCCCTTGTTGGt < 2:5158177/93‑1 (MQ=255)
ttCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTAt < 1:1049746/93‑1 (MQ=255)
cccGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTc < 1:6324655/93‑1 (MQ=255)
cccGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTc < 1:1183153/93‑1 (MQ=255)
ccGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTcc < 2:5998875/93‑1 (MQ=255)
cGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCa < 1:3823646/93‑1 (MQ=255)
cGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCa < 1:4698524/93‑1 (MQ=255)
cGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCa < 2:1546611/93‑1 (MQ=255)
gggCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAt < 1:3384439/93‑1 (MQ=255)
gggCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAt < 2:5739047/93‑1 (MQ=255)
gggCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAt < 2:907358/93‑1 (MQ=255)
ggCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATg < 1:5370009/93‑1 (MQ=255)
|
TATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCAATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATG > NC_000913/3467232‑3467411
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCAATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCTT > NC_000913/3467229‑3467414
|
GTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCG < SRR4302537.796634/94‑1 (MQ=60)
GTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAT > SRR4302537.1089797/1‑94 (MQ=60)
GTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGAT > SRR4302537.2482978/1‑94 (MQ=60)
TTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTG > SRR4302537.2139778/1‑94 (MQ=60)
CCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAG > SRR4302537.6072076/1‑94 (MQ=60)
CAAACTGACTAATTTCAGCAGCTTTTGCGTTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGA < SRR4302537.4722642/94‑1 (MQ=60)
CAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGA < SRR4302537.6299875/94‑1 (MQ=60)
AAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAA > SRR4302537.5785166/1‑94 (MQ=60)
AACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAG < SRR4302537.6331238/94‑1 (MQ=60)
TGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAA > SRR4302537.3032437/1‑94 (MQ=60)
GACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAAC > SRR4302537.6172412/1‑94 (MQ=60)
GACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAAC > SRR4302537.5524359/1‑94 (MQ=60)
AATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCAC > SRR4302537.779766/1‑94 (MQ=60)
ATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACC > SRR4302537.4913587/1‑94 (MQ=60)
ATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACC > SRR4302537.6446924/1‑94 (MQ=60)
ATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACC < SRR4302537.2481706/94‑1 (MQ=60)
TTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCA < SRR4302537.2143879/94‑1 (MQ=60)
TCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGG < SRR4302537.912496/94‑1 (MQ=60)
TCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGG < SRR4302537.1778393/94‑1 (MQ=60)
CAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGC > SRR4302537.4869144/1‑94 (MQ=60)
CAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGC < SRR4302537.210522/94‑1 (MQ=60)
CAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGC < SRR4302537.2046694/94‑1 (MQ=60)
CAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATT > SRR4302537.1691877/1‑94 (MQ=60)
AGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTT < SRR4302537.3357831/94‑1 (MQ=60)
GCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTT > SRR4302537.5427951/1‑94 (MQ=60)
CTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTC < SRR4302537.2029156/94‑1 (MQ=60)
GTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCAT < SRR4302537.2769013/94‑1 (MQ=60)
TTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATA < SRR4302537.3942861/94‑1 (MQ=60)
GCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAA < SRR4302537.4027267/94‑1 (MQ=60)
GCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAA > SRR4302537.1874000/1‑94 (MQ=60)
GGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATT < SRR4302537.4312640/94‑1 (MQ=60)
GGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATT > SRR4302537.761791/1‑94 (MQ=60)
GGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATT > SRR4302537.6285670/1‑94 (MQ=60)
GTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTT < SRR4302537.5899176/94‑1 (MQ=60)
TACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTT < SRR4302537.2554608/94‑1 (MQ=60)
CGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGC > SRR4302537.2350552/1‑94 (MQ=60)
TTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCAT < SRR4302537.2306760/94‑1 (MQ=60)
TAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCG < SRR4302537.5563568/94‑1 (MQ=60)
GCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAAT < SRR4302537.2582561/94‑1 (MQ=60)
ACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAAC < SRR4302537.6166816/94‑1 (MQ=60)
ACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAAC < SRR4302537.4025516/94‑1 (MQ=60)
GGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTG > SRR4302537.6097558/1‑94 (MQ=60)
GGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTG < SRR4302537.477558/94‑1 (MQ=60)
TTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAT > SRR4302537.4672341/1‑94 (MQ=60)
TTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAT < SRR4302537.4887230/94‑1 (MQ=60)
TTAGTTGCATCATTTGCTTTCGCTTTCCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGAT < SRR4302537.5129946/94‑1 (MQ=60)
TAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATA < SRR4302537.1735940/94‑1 (MQ=60)
AGTTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATAT < SRR4302537.3373121/94‑1 (MQ=60)
TTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTT < SRR4302537.5922358/94‑1 (MQ=60)
TTGCATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTT < SRR4302537.255305/94‑1 (MQ=60)
ATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTA < SRR4302537.4019976/94‑1 (MQ=60)
ATCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTA < SRR4302537.2833527/94‑1 (MQ=60)
TCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTAC > SRR4302537.4640193/1‑94 (MQ=60)
TCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTAC < SRR4302537.214219/94‑1 (MQ=60)
TCATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTAC < SRR4302537.2289130/94‑1 (MQ=60)
CATTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACC < SRR4302537.5751377/94‑1 (MQ=60)
TTTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCAC < SRR4302537.2221128/94‑1 (MQ=60)
TTTGCTTTCGCTTTTCCCGGGCGATGTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCAC < SRR4302537.848593/94‑1 (MQ=60)
TTGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACC < SRR4302537.633354/94‑1 (MQ=60)
TGCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCT < SRR4302537.4156821/94‑1 (MQ=60)
TCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTT < SRR4302537.1708743/94‑1 (MQ=60)
GCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTT < SRR4302537.708107/94‑1 (MQ=60)
GCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTT < SRR4302537.1336414/94‑1 (MQ=60)
GCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTT > SRR4302537.4412007/1‑94 (MQ=60)
GCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTT < SRR4302537.1180552/94‑1 (MQ=60)
GCTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTT > SRR4302537.857105/1‑94 (MQ=60)
CTTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTG > SRR4302537.3400391/1‑94 (MQ=60)
TTTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGT < SRR4302537.4946635/94‑1 (MQ=60)
TTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTT < SRR4302537.4008082/94‑1 (MQ=60)
TTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTT < SRR4302537.609938/94‑1 (MQ=60)
TTCGCTTTTCCCGGGCGATTTGTAGAAGAAACCAACCAGGCATTTTCATAAATTGTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTT < SRR4302537.4697743/94‑1 (MQ=60)
CGCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGG < SRR4302537.2967278/94‑1 (MQ=60)
GCTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGT < SRR4302537.1474936/94‑1 (MQ=60)
CTTTTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTT > SRR4302537.3620090/1‑94 (MQ=60)
TTCCCGGGCGATTTGTAGAAGAAGCCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATT < SRR4302537.6278217/94‑1 (MQ=60)
TTCCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATT < SRR4302537.1056983/94‑1 (MQ=60)
CCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCC < SRR4302537.1483669/94‑1 (MQ=60)
CCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCC < SRR4302537.6367921/94‑1 (MQ=60)
CCCGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCC < SRR4302537.1191381/94‑1 (MQ=60)
CGGGCTATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTCCCACCTTGTTGGTTATTCCAT < SRR4302537.4511959/94‑1 (MQ=60)
CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT < SRR4302537.4731030/94‑1 (MQ=60)
CGGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCAT < SRR4302537.3850453/94‑1 (MQ=60)
GGGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATG < SRR4302537.3408417/94‑1 (MQ=60)
GGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGC > SRR4302537.166293/1‑94 (MQ=60)
GGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGC < SRR4302537.5406746/94‑1 (MQ=60)
GGCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGC < SRR4302537.4344018/94‑1 (MQ=60)
GCGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCT < SRR4302537.6111157/94‑1 (MQ=60)
CGATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCTT > SRR4302537.2354557/1‑94 (MQ=60)
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GTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACGCCACGGGTTAGTTGCATCATTTGCTTTCGCTTTTCCCGGGCAATTTGTAGAAGAAACCCACCAGGCATTTTCATAAATTTTGCCATCGAAAATAACCTGATATTTATTACCACCTTGTTGGTTATTCCATGCTT > NC_000913/3467229‑3467414
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
