Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,493,873 |
T→G |
R742R (CGT→CGG) |
nirB → |
nitrite reductase (NAD(P)H) subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,493,873 | 0 | T | G | 99.6%
| 833.4
/ ‑5.2
| 239 | R742R (CGT→CGG) | nirB | nitrite reductase (NAD(P)H) subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (124/114); total (125/114) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 |
Only 100 of 245 total aligned reads displayed.
GAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAA > NC_000913/3493783‑3493962
|
aCCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGc > 2:43464/1‑93 (MQ=255)
gcgTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCgc > 2:5955300/1‑92 (MQ=255)
gcgTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGa < 2:1288544/93‑1 (MQ=255)
tCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACaa < 1:4907931/93‑1 (MQ=255)
tCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACaa > 2:3419998/1‑93 (MQ=255)
cATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACaaa < 1:320525/93‑1 (MQ=255)
aTGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAAc < 2:3161666/93‑1 (MQ=255)
ggATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAc > 2:6195958/1‑93 (MQ=255)
ggATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAc < 2:4672970/93‑1 (MQ=255)
gATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCCACATCCGGACTGCCGACAAACTGAcg > 1:6240448/1‑93 (MQ=255)
aTCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAcgc < 1:3487830/93‑1 (MQ=255)
tgctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTa < 2:6064781/93‑1 (MQ=255)
gctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTAc < 1:5259232/93‑1 (MQ=255)
ctgGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTAcc < 1:1624673/93‑1 (MQ=255)
cggcggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCAc < 2:5622416/93‑1 (MQ=255)
gcggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCg > 2:504763/1‑93 (MQ=255)
cggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGt < 1:16695/93‑1 (MQ=255)
ggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTg > 1:2491633/1‑93 (MQ=255)
ggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTg < 2:5446804/93‑1 (MQ=255)
ggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTg > 1:2711077/1‑93 (MQ=255)
ggATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTg < 2:2593340/93‑1 (MQ=255)
gATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTgg < 1:1328951/93‑1 (MQ=255)
atatCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGt < 1:1373337/93‑1 (MQ=255)
tatCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGtt > 2:6005519/1‑93 (MQ=255)
atcgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTa > 2:2327134/1‑93 (MQ=255)
atcgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTa < 2:2939495/93‑1 (MQ=255)
atcgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTa < 2:5680888/93‑1 (MQ=255)
tcgatcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAg < 2:5142781/93‑1 (MQ=255)
atcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACCAACTCAAGCGTACAGCACCGTGGTTAGaaa > 2:3917010/1‑93 (MQ=255)
atcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGaaa > 1:2576467/1‑93 (MQ=255)
atcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGaaa < 1:4653513/93‑1 (MQ=255)
atcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGaaa > 1:5798348/1‑93 (MQ=255)
atcgCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGaaa > 1:54454/1‑93 (MQ=255)
cgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCt < 2:68067/93‑1 (MQ=255)
cgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCt < 1:3728745/93‑1 (MQ=255)
cgAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCt < 1:5133760/93‑1 (MQ=255)
gAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTc < 1:2820888/93‑1 (MQ=255)
aaCGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGa > 1:3835817/1‑93 (MQ=255)
aCGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGaa > 2:1629652/1‑93 (MQ=255)
cTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggc > 1:1172978/1‑93 (MQ=255)
tGATCATATATCCCGACCTCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcg < 2:2564981/93‑1 (MQ=255)
tGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcg < 1:4206775/93‑1 (MQ=255)
gATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcgg > 2:2441468/1‑93 (MQ=255)
gATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcgg > 1:661462/1‑93 (MQ=255)
aTCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAggcggc < 1:6173838/93‑1 (MQ=255)
tCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCa > 1:5601263/1‑93 (MQ=255)
tCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCa < 2:1468108/93‑1 (MQ=255)
tCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCa > 1:98979/1‑93 (MQ=255)
cAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCAt > 2:2633499/1‑93 (MQ=255)
cAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCAt > 2:4410322/1‑93 (MQ=255)
cAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCAt > 1:2126924/1‑93 (MQ=255)
aaaTATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATc > 1:5398752/1‑93 (MQ=255)
aaaTATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATc < 2:2291423/93‑1 (MQ=255)
atatCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGa < 2:800637/93‑1 (MQ=255)
atatCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGa < 1:5726816/93‑1 (MQ=255)
tatCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAt < 2:3834343/93‑1 (MQ=255)
tatCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAt > 1:1032437/1‑93 (MQ=255)
tatCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAt < 2:219805/93‑1 (MQ=255)
atCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAtt > 2:3485329/1‑93 (MQ=255)
atCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAtt > 1:3142260/1‑93 (MQ=255)
tcGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTAcc < 2:3947176/93‑1 (MQ=255)
tcGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTAcc < 2:4284796/93‑1 (MQ=255)
cGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCt < 1:1908028/93‑1 (MQ=255)
aCCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGa > 1:407743/1‑93 (MQ=255)
ccGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGaa < 1:3023209/93‑1 (MQ=255)
ccGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGaa < 2:4404178/93‑1 (MQ=255)
cGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGaaa > 2:1216103/1‑93 (MQ=255)
cGCTTAATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGaaa < 2:3551242/93‑1 (MQ=255)
gCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAg > 1:6187660/1‑93 (MQ=255)
gCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAg < 2:2506009/93‑1 (MQ=255)
gCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAg < 1:2773969/93‑1 (MQ=255)
ttCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCa < 1:6169285/93‑1 (MQ=255)
cATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGt < 1:4540300/93‑1 (MQ=255)
atgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTg < 1:1662046/93‑1 (MQ=255)
atgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTg > 2:3704668/1‑93 (MQ=255)
tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGa > 2:4831915/1‑93 (MQ=255)
tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGa < 1:1562189/93‑1 (MQ=255)
tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGa < 1:2275537/93‑1 (MQ=255)
tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGa > 2:4258185/1‑93 (MQ=255)
tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGa > 2:1010168/1‑93 (MQ=255)
tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGa < 2:3625776/93‑1 (MQ=255)
tgatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGa > 2:2866218/1‑93 (MQ=255)
gatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAt < 1:1099142/93‑1 (MQ=255)
gatgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAt > 1:2623030/1‑93 (MQ=255)
atgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATc > 1:6422454/1‑93 (MQ=255)
tgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCa < 1:4333607/93‑1 (MQ=255)
tgTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCa > 1:3325629/1‑93 (MQ=255)
gTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCAt < 2:1921464/93‑1 (MQ=255)
gTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCAt > 1:5883341/1‑93 (MQ=255)
gTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCAt > 1:4406929/1‑93 (MQ=255)
tCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTg > 1:5553127/1‑93 (MQ=255)
tCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTg < 1:2244873/93‑1 (MQ=255)
cTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTga < 1:4505714/93‑1 (MQ=255)
tACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTgac > 1:748572/1‑93 (MQ=255)
tACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTgac > 2:5411358/1‑93 (MQ=255)
aCATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTgacg < 2:2255983/93‑1 (MQ=255)
aTCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTgacgac < 1:2048594/93‑1 (MQ=255)
aTCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTgacgac > 2:4772544/1‑93 (MQ=255)
tCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACa < 1:5021830/93‑1 (MQ=255)
ccGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGTCaa < 2:1973386/93‑1 (MQ=255)
|
GAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAA > NC_000913/3493783‑3493962
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTG > NC_000913/3493780‑3493966
|
CATGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGG < SRR4302537.3200988/94‑1 (MQ=60)
ATGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGA > SRR4302537.5047127/1‑94 (MQ=60)
ATGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGA > SRR4302537.5720697/1‑94 (MQ=60)
TGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGAC < SRR4302537.3368894/94‑1 (MQ=60)
AAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTG < SRR4302537.1410635/94‑1 (MQ=60)
AAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATAGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTG < SRR4302537.5065578/94‑1 (MQ=60)
CGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACA < SRR4302537.4341524/94‑1 (MQ=60)
CGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACA > SRR4302537.655497/1‑94 (MQ=60)
TCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAA < SRR4302537.4941805/94‑1 (MQ=60)
TCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAA > SRR4302537.5857109/1‑94 (MQ=60)
CATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAAC < SRR4302537.322747/94‑1 (MQ=60)
TGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTG > SRR4302537.6250128/1‑94 (MQ=60)
GCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGA > SRR4302537.5478066/1‑94 (MQ=60)
CGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGAC > SRR4302537.1657734/1‑94 (MQ=60)
GGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACG < SRR4302537.1275287/94‑1 (MQ=60)
GGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACG > SRR4302537.1167356/1‑94 (MQ=60)
GGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCCACATCCGGACTGCCGACAAACTGACG > SRR4302537.6283349/1‑94 (MQ=60)
GATCTGCTGGCGGCTGATATCGATCGCGAAGCGCTGATCAATTATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGC < SRR4302537.3225941/94‑1 (MQ=60)
GATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGC < SRR4302537.213568/94‑1 (MQ=60)
GATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACAGACGC > SRR4302537.6223197/1‑94 (MQ=60)
ATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCG > SRR4302537.1676092/1‑94 (MQ=60)
ATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCG < SRR4302537.3512497/94‑1 (MQ=60)
ATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCG > SRR4302537.5260109/1‑94 (MQ=60)
GCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACC < SRR4302537.5295420/94‑1 (MQ=60)
CTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCG < SRR4302537.1636038/94‑1 (MQ=60)
CGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACC < SRR4302537.6219598/94‑1 (MQ=60)
GGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCG > SRR4302537.2028697/1‑94 (MQ=60)
CGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTG > SRR4302537.2509176/1‑94 (MQ=60)
CGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTG > SRR4302537.2730013/1‑94 (MQ=60)
CGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTG < SRR4302537.16830/94‑1 (MQ=60)
CGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTG > SRR4302537.3330899/1‑94 (MQ=60)
GATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGT < SRR4302537.1338216/94‑1 (MQ=60)
GATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGT < SRR4302537.2523415/94‑1 (MQ=60)
ATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTT < SRR4302537.1382926/94‑1 (MQ=60)
ATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTT > SRR4302537.5301385/1‑94 (MQ=60)
TATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTA > SRR4302537.2221197/1‑94 (MQ=60)
TCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACAGAACCGTGGTTAGA > SRR4302537.5164674/1‑94 (MQ=60)
TCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTAACGCACCGTGGTTAGA > SRR4302537.2930153/1‑94 (MQ=60)
GATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAA < SRR4302537.410002/94‑1 (MQ=60)
GATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAA > SRR4302537.2594503/1‑94 (MQ=60)
GATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAA < SRR4302537.914264/94‑1 (MQ=60)
GATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAA > SRR4302537.5838101/1‑94 (MQ=60)
GATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAA > SRR4302537.54855/1‑94 (MQ=60)
ATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAA > SRR4302537.5624117/1‑94 (MQ=60)
ATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAA > SRR4302537.716849/1‑94 (MQ=60)
ATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAA < SRR4302537.4685693/94‑1 (MQ=60)
TCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAAC < SRR4302537.5544095/94‑1 (MQ=60)
CGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACC > SRR4302537.2737064/1‑94 (MQ=60)
CGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACC > SRR4302537.4726730/1‑94 (MQ=60)
GCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCT > SRR4302537.4522544/1‑94 (MQ=60)
GAGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCT < SRR4302537.3023153/94‑1 (MQ=60)
CGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTC < SRR4302537.5169132/94‑1 (MQ=60)
CGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTC < SRR4302537.3754940/94‑1 (MQ=60)
GAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCG < SRR4302537.2840609/94‑1 (MQ=60)
GAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCG > SRR4302537.3605044/1‑94 (MQ=60)
AAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGA > SRR4302537.3862695/1‑94 (MQ=60)
AACGCTGATTAAATATCTCGACCGCTTCATGTTGTTCTACATACGGAGTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAA < SRR4302537.4053663/94‑1 (MQ=60)
AACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAA < SRR4302537.235986/94‑1 (MQ=60)
AACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAA > SRR4302537.3260791/1‑94 (MQ=60)
ACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAG > SRR4302537.4025458/1‑94 (MQ=60)
ACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAG > SRR4302537.1763055/1‑94 (MQ=60)
GCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGC > SRR4302537.1181139/1‑94 (MQ=60)
GCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGC < SRR4302537.5581691/94‑1 (MQ=60)
CTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCG < SRR4302537.5788511/94‑1 (MQ=60)
CTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCG > SRR4302537.2728978/1‑94 (MQ=60)
CTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCAGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCG < SRR4302537.2637968/94‑1 (MQ=60)
TGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGG > SRR4302537.665964/1‑94 (MQ=60)
TGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGG < SRR4302537.4236130/94‑1 (MQ=60)
GATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGC > SRR4302537.1370881/1‑94 (MQ=60)
gtcaaattaCTCGACCGGTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCA < SRR4302537.2595600/85‑1 (MQ=60)
ATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCA < SRR4302537.6216359/94‑1 (MQ=60)
ATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCA > SRR4302537.5639553/1‑94 (MQ=60)
ATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCA > SRR4302537.99696/1‑94 (MQ=60)
ATCAAATATCCCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCA < SRR4302537.458937/94‑1 (MQ=60)
TCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCAT < SRR4302537.3775103/94‑1 (MQ=60)
TCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCAT < SRR4302537.1479842/94‑1 (MQ=60)
TCAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCAT > SRR4302537.2141884/1‑94 (MQ=60)
CAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATC > SRR4302537.2280549/1‑94 (MQ=60)
CAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATC > SRR4302537.2489012/1‑94 (MQ=60)
CAAATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATC > SRR4302537.5435605/1‑94 (MQ=60)
AATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGA > SRR4302537.2798923/1‑94 (MQ=60)
ATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAT > SRR4302537.1039548/1‑94 (MQ=60)
ATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAT > SRR4302537.118560/1‑94 (MQ=60)
ATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAT < SRR4302537.5766017/94‑1 (MQ=60)
ATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAT > SRR4302537.4379954/1‑94 (MQ=60)
ATATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGAT > SRR4302537.3492008/1‑94 (MQ=60)
TATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATT > SRR4302537.3164314/1‑94 (MQ=60)
TATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATT > SRR4302537.3581706/1‑94 (MQ=60)
ATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTA > SRR4302537.4548912/1‑94 (MQ=60)
ATCTCGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTA < SRR4302537.5000826/94‑1 (MQ=60)
CGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTG < SRR4302537.1921278/94‑1 (MQ=60)
CGACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTG > SRR4302537.2760416/1‑94 (MQ=60)
GACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGTGGCATCGATTACCTGA > SRR4302537.4770863/1‑94 (MQ=60)
GACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGA > SRR4302537.410567/1‑94 (MQ=60)
GACCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGA < SRR4302537.3116682/94‑1 (MQ=60)
CCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAA < SRR4302537.3044281/94‑1 (MQ=60)
CCGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAA > SRR4302537.6327012/1‑94 (MQ=60)
CGCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAG > SRR4302537.6230285/1‑94 (MQ=60)
GCTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGC < SRR4302537.2793360/94‑1 (MQ=60)
CTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCA < SRR4302537.5335451/94‑1 (MQ=60)
CTTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCA > SRR4302537.104886/1‑94 (MQ=60)
TTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAG < SRR4302537.6211767/94‑1 (MQ=60)
TTCATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAG < SRR4302537.5991246/94‑1 (MQ=60)
CATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTG < SRR4302537.4571726/94‑1 (MQ=60)
ATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTTGTTAGAAAAGCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGA > SRR4302537.6144176/1‑94 (MQ=60)
ATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGA > SRR4302537.4123237/1‑94 (MQ=60)
ATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGA > SRR4302537.1598371/1‑94 (MQ=60)
ATGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGA < SRR4302537.1673693/94‑1 (MQ=60)
TGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAT < SRR4302537.2291600/94‑1 (MQ=60)
TGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAT < SRR4302537.4551257/94‑1 (MQ=60)
TGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAT < SRR4302537.1573090/94‑1 (MQ=60)
TGATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGAT > SRR4302537.2641412/1‑94 (MQ=60)
GATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAACACCTCGAAGGCGGCATCGATTACCTGAAAGCAtgcatc > SRR4302537.51753/1‑88 (MQ=60)
GATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATC < SRR4302537.1106736/94‑1 (MQ=60)
GATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATC > SRR4302537.6466107/1‑94 (MQ=60)
ATGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCA > SRR4302537.3349157/1‑94 (MQ=60)
TGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCAT > SRR4302537.4437338/1‑94 (MQ=60)
TGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCAT < SRR4302537.936851/94‑1 (MQ=60)
TGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCAT > SRR4302537.5923712/1‑94 (MQ=60)
TGTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCAT < SRR4302537.4363708/94‑1 (MQ=60)
GTTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATT < SRR4302537.2145509/94‑1 (MQ=60)
TTCTACATCCGGACTGCCGACAGACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTG > SRR4302537.6464641/1‑94 (MQ=60)
TTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTG < SRR4302537.4294617/94‑1 (MQ=60)
TTCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTG > SRR4302537.5591046/1‑94 (MQ=60)
TCTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGA < SRR4302537.2260709/94‑1 (MQ=60)
CTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGAC > SRR4302537.753678/1‑94 (MQ=60)
CTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGAC < SRR4302537.4536870/94‑1 (MQ=60)
CTACATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAAAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGAC < SRR4302537.6212685/94‑1 (MQ=60)
CATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGAC < SRR4302537.1646362/94‑1 (MQ=60)
CATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGAC > SRR4302537.17889/1‑94 (MQ=60)
CATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGAC > SRR4302537.5722557/1‑94 (MQ=60)
ATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACA < SRR4302537.582613/94‑1 (MQ=60)
ATCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACA < SRR4302537.2062960/94‑1 (MQ=60)
TCCGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAA < SRR4302537.5056419/94‑1 (MQ=60)
CGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAAC < SRR4302537.1727107/94‑1 (MQ=60)
CGGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAAC > SRR4302537.2575085/1‑94 (MQ=60)
GGACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACT > SRR4302537.1707913/1‑94 (MQ=60)
GACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCATTGATCATTGACGACAAACTG > SRR4302537.3108595/1‑94 (MQ=60)
|
CATGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTG > NC_000913/3493780‑3493966
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
