Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,527,145 |
A→G |
T54A (ACG→GCG) |
yrfH → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,527,145 | 0 | A | G | 95.8%
| 674.0
/ 13.6
| 214 | T54A (ACG→GCG) | yrfH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (2/7); new base G (83/122); total (85/129) |
| Fisher's exact test for biased strand distribution p-value = 3.23e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.07e-01 |
Only 100 of 223 total aligned reads displayed.
GCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTG > NC_000913/3527056‑3527234
|
gcgcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCgcgc < 2:4630581/93‑1 (MQ=255)
gcgcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCgcgc < 2:2872389/93‑1 (MQ=255)
gcgcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCgcgc > 2:5288662/1‑93 (MQ=255)
gcgcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCgcgc > 1:185671/1‑93 (MQ=255)
gcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTc > 1:1347132/1‑93 (MQ=255)
gcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTc < 1:1996390/93‑1 (MQ=255)
cgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCa > 1:2194438/1‑93 (MQ=255)
gcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCAc > 1:4613801/1‑93 (MQ=255)
gcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCAc > 2:869859/1‑93 (MQ=255)
tGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCActc < 1:3761280/93‑1 (MQ=255)
tGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCActc < 1:3846153/93‑1 (MQ=255)
cccGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTgc > 2:3340585/1‑93 (MQ=255)
ccGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTgcg > 1:3964199/1‑93 (MQ=255)
cGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGGAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTgcgc < 1:1911255/93‑1 (MQ=255)
cGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTgcgc > 2:3219975/1‑93 (MQ=255)
cGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTgcgc > 2:1156211/1‑93 (MQ=255)
cGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTgcgc > 2:3791242/1‑93 (MQ=255)
gAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAg < 2:3062300/93‑1 (MQ=255)
gAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAg < 1:4451726/93‑1 (MQ=255)
gAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCACAAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTATGCGCCAg < 1:3418256/93‑1 (MQ=255)
gATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGaaa > 1:3130516/1‑93 (MQ=255)
aTTGAAGGCGTTAAGGTGCATTACACCGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAAt < 2:5213564/93‑1 (MQ=255)
aTTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAAt < 2:1096858/93‑1 (MQ=255)
aTTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAAt > 2:4993090/1‑93 (MQ=255)
aTTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAAt > 1:1551895/1‑93 (MQ=255)
aTTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAAt > 2:4234485/1‑93 (MQ=255)
ttGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATg > 1:2018640/1‑93 (MQ=255)
ttGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATg < 2:2527665/93‑1 (MQ=255)
tGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGa < 1:5256074/93‑1 (MQ=255)
gAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGAc < 2:2208762/93‑1 (MQ=255)
aaGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACg > 2:1476377/1‑93 (MQ=255)
ggTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGc < 1:4396612/93‑1 (MQ=255)
ggTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGc < 2:5996045/93‑1 (MQ=255)
ggTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGc < 1:6240874/93‑1 (MQ=255)
gTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCa > 2:4085130/1‑93 (MQ=255)
tAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCAc > 1:6259929/1‑93 (MQ=255)
aaGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACg < 1:1180804/93‑1 (MQ=255)
aaGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACg < 2:5428662/93‑1 (MQ=255)
aaGGTGCATTACAACGGGCAGCACAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACg < 1:9534/93‑1 (MQ=255)
aGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACgg > 1:5943236/1‑93 (MQ=255)
aGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACgg > 1:2056759/1‑93 (MQ=255)
aGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACgg > 1:5403902/1‑93 (MQ=255)
aGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACgg > 2:510417/1‑93 (MQ=255)
ggTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGt < 2:2066419/93‑1 (MQ=255)
tGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGa < 1:1016547/93‑1 (MQ=255)
tGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGa > 2:951040/1‑93 (MQ=255)
gccATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGa < 2:3981208/91‑1 (MQ=255)
gCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAt > 1:755576/1‑93 (MQ=255)
gCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGCGAt > 2:2696810/1‑93 (MQ=255)
aTTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTg > 2:3715686/1‑93 (MQ=255)
aTTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTg < 2:1648655/93‑1 (MQ=255)
aTTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTg < 1:598386/93‑1 (MQ=255)
ttACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGt < 1:5792757/93‑1 (MQ=255)
ttACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGt > 1:3300693/1‑93 (MQ=255)
ttACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGt > 2:2296546/1‑93 (MQ=255)
tACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTa < 1:2168361/93‑1 (MQ=255)
cAACGGGCGGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTaaa < 2:2749601/93‑1 (MQ=255)
cAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTaaa < 2:784370/93‑1 (MQ=255)
aaCGCGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAg < 1:5705219/93‑1 (MQ=255)
aCGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAATGTAAAgg < 2:6366371/93‑1 (MQ=255)
ggCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGCAATGACGAACGCACGGTGATTGTAAAGGCGa < 2:5167617/93‑1 (MQ=255)
gcagcgcagcAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGAt > 1:1056517/1‑93 (MQ=255)
cagcgcaggAAGCCGAGCAAGATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGAtt < 2:61771/93‑1 (MQ=255)
agcgcagcAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTa < 1:4118273/93‑1 (MQ=255)
gcgcagcAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTAc > 2:2014878/1‑93 (MQ=255)
gcgcagcAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTAc < 1:1806761/93‑1 (MQ=255)
cgcagcAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACt < 1:2523261/93‑1 (MQ=255)
cgcagcAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACt < 2:3083632/93‑1 (MQ=255)
cagcaAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGa > 2:1195086/1‑93 (MQ=255)
cagcaAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGa > 1:869033/1‑93 (MQ=255)
agcaAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGaa < 2:1529053/93‑1 (MQ=255)
gcaAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAc < 1:6339359/93‑1 (MQ=255)
gcaAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAc > 1:360661/1‑93 (MQ=255)
gcaAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAc < 1:5301293/93‑1 (MQ=255)
aGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGc < 1:5035114/93‑1 (MQ=255)
gCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCg > 2:4426897/1‑93 (MQ=255)
ccGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGt < 2:1288763/93‑1 (MQ=255)
ccGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGt < 2:1918861/93‑1 (MQ=255)
gAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCg > 2:3465008/1‑93 (MQ=255)
gAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCg > 1:3413494/1‑93 (MQ=255)
gAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCg < 2:3263588/93‑1 (MQ=255)
gCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGcc < 2:5627805/93‑1 (MQ=255)
aaaaTCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGcccc > 1:5873104/1‑93 (MQ=255)
aaaaTCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGcccc > 2:4891264/1‑93 (MQ=255)
aaaTCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCg > 1:3565475/1‑93 (MQ=255)
aaTCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGc < 1:5486801/93‑1 (MQ=255)
aTCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGcc > 2:5347604/1‑93 (MQ=255)
gAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAg < 1:1127963/93‑1 (MQ=255)
gAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAg < 2:718684/93‑1 (MQ=255)
aGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAgg < 2:1953317/93‑1 (MQ=255)
gCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGc < 2:4707210/93‑1 (MQ=255)
cTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCa < 2:622961/93‑1 (MQ=255)
cTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCa < 2:1272359/93‑1 (MQ=255)
tGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAg > 2:461020/1‑93 (MQ=255)
gAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGc < 1:348488/93‑1 (MQ=255)
gAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGc > 2:1444184/1‑93 (MQ=255)
aaTGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGcc > 2:2391958/1‑93 (MQ=255)
aTGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCt > 1:2757373/1‑93 (MQ=255)
tGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCtt < 1:3583024/93‑1 (MQ=255)
gCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTg < 1:2661304/93‑1 (MQ=255)
|
GCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTG > NC_000913/3527056‑3527234
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTG > NC_000913/3527052‑3527237
|
ACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCG < SRR4302537.3425376/94‑1 (MQ=60)
CGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGC > SRR4302537.186992/1‑94 (MQ=60)
CGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTC < SRR4302537.5631778/94‑1 (MQ=60)
CGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTC > SRR4302537.1356522/1‑94 (MQ=60)
CGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTC < SRR4302537.1263222/94‑1 (MQ=60)
GCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCA < SRR4302537.629698/94‑1 (MQ=60)
GCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCA > SRR4302537.2209898/1‑94 (MQ=60)
GCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCA < SRR4302537.2010268/94‑1 (MQ=60)
CGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCAC > SRR4302537.4645750/1‑94 (MQ=60)
GCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACT > SRR4302537.1161760/1‑94 (MQ=60)
GCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACT < SRR4302537.6315224/94‑1 (MQ=60)
TGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCT < SRR4302537.3873079/94‑1 (MQ=60)
TGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCT < SRR4302537.3787688/94‑1 (MQ=60)
GGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTG < SRR4302537.6013159/94‑1 (MQ=60)
CCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCG > SRR4302537.3991927/1‑94 (MQ=60)
CCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCG < SRR4302537.4106617/94‑1 (MQ=60)
CCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGC > SRR4302537.5326075/1‑94 (MQ=60)
CGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGGAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCC < SRR4302537.1924524/94‑1 (MQ=60)
GGGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCA > SRR4302537.2789460/1‑94 (MQ=60)
GAAATTATTGAAGGCGGTAAGGTGCATCACAACGGTCAGAGCAGCAAGCCTAGCAAAATCGTCGAGCTGAATGCCGCGCTCCCTCTGCGCCAGG < SRR4302537.194277/94‑1 (MQ=60)
GAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGG < SRR4302537.4482475/94‑1 (MQ=60)
GAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGG < SRR4302537.5453311/94‑1 (MQ=60)
GAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCACAAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTATGCGCCAGG < SRR4302537.3442453/94‑1 (MQ=60)
TGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAA > SRR4302537.3152464/1‑94 (MQ=60)
GATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAAT > SRR4302537.1562721/1‑94 (MQ=60)
ATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATG > SRR4302537.2032717/1‑94 (MQ=60)
ATTGAAGGCGGTAAGGGGCATAACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATG < SRR4302537.4534191/94‑1 (MQ=60)
TTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGA < SRR4302537.5861430/94‑1 (MQ=60)
TTGAAGGCGGTAAGGTGCATTAAAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGA < SRR4302537.3570696/94‑1 (MQ=60)
TGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGAC < SRR4302537.5292242/94‑1 (MQ=60)
GGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAGATGACGAAC > SRR4302537.4766989/1‑94 (MQ=60)
GCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACG < SRR4302537.5815897/94‑1 (MQ=60)
CGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGC > SRR4302537.1056804/1‑94 (MQ=60)
CGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGC < SRR4302537.2121616/94‑1 (MQ=60)
GGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCA < SRR4302537.4426945/94‑1 (MQ=60)
GGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCA < SRR4302537.6283776/94‑1 (MQ=60)
GGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCA > SRR4302537.3165154/1‑94 (MQ=60)
GTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCAC > SRR4302537.6302911/1‑94 (MQ=60)
GTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCAC < SRR4302537.2025968/94‑1 (MQ=60)
TAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACG < SRR4302537.6343070/94‑1 (MQ=60)
AAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGG > SRR4302537.2071195/1‑94 (MQ=60)
AAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGG < SRR4302537.1189019/94‑1 (MQ=60)
AAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGG > SRR4302537.5984022/1‑94 (MQ=60)
AAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGG > SRR4302537.5440772/1‑94 (MQ=60)
AAGGTGCATTACAACGGGCAGCACAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGG < SRR4302537.9601/94‑1 (MQ=60)
aagagaataacagcggggagcaaaaaaagccgaaaAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGT < SRR4302537.4882362/59‑1 (MQ=60)
GGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTG < SRR4302537.4415515/94‑1 (MQ=60)
GGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTG < SRR4302537.945970/94‑1 (MQ=60)
TGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAT > SRR4302537.461134/1‑94 (MQ=60)
TGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAT > SRR4302537.760730/1‑94 (MQ=60)
TGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAT < SRR4302537.1023547/94‑1 (MQ=60)
GCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATT > SRR4302537.6475146/1‑94 (MQ=60)
ATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGT < SRR4302537.602481/94‑1 (MQ=60)
ATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGT > SRR4302537.1445687/1‑94 (MQ=60)
ATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGT < SRR4302537.1822773/94‑1 (MQ=60)
ATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGT > SRR4302537.3324032/1‑94 (MQ=60)
TTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTA < SRR4302537.5832469/94‑1 (MQ=60)
TACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAA < SRR4302537.2183635/94‑1 (MQ=60)
ACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAA < SRR4302537.2559514/94‑1 (MQ=60)
CAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAG < SRR4302537.2207934/94‑1 (MQ=60)
CAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAG < SRR4302537.5914176/94‑1 (MQ=60)
AACGGGCAGCGTAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGG > SRR4302537.3973517/1‑94 (MQ=60)
AACGCGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGG < SRR4302537.5744267/94‑1 (MQ=60)
CGGGCAGCGCAACAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCG < SRR4302537.1943034/94‑1 (MQ=60)
GGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGAT > SRR4302537.1063806/1‑94 (MQ=60)
AGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTAC < SRR4302537.4147033/94‑1 (MQ=60)
GCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACT < SRR4302537.1819366/94‑1 (MQ=60)
GCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACT < SRR4302537.3454534/94‑1 (MQ=60)
CGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTG < SRR4302537.2540980/94‑1 (MQ=60)
CGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTG < SRR4302537.3823453/94‑1 (MQ=60)
GCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGA > SRR4302537.875000/1‑94 (MQ=60)
AAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAA < SRR4302537.5367251/94‑1 (MQ=60)
AGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAC > SRR4302537.363169/1‑94 (MQ=60)
GCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACA < SRR4302537.6382679/94‑1 (MQ=60)
GCAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACA < SRR4302537.5337704/94‑1 (MQ=60)
CAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAG > SRR4302537.3594782/1‑94 (MQ=60)
CAAGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAG < SRR4302537.1073886/94‑1 (MQ=60)
AAGCGGAGCAAAATCGTCGAGCTGAATGCCGCGCTCGCTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGC < SRR4302537.840896/94‑1 (MQ=60)
AGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCG < SRR4302537.5944149/94‑1 (MQ=60)
AGCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCG < SRR4302537.5069778/94‑1 (MQ=60)
GCCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGT < SRR4302537.1876158/94‑1 (MQ=60)
CCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTC < SRR4302537.2070173/94‑1 (MQ=60)
CCGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATCACTGAACAGCGTC > SRR4302537.51617/1‑94 (MQ=60)
CGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGCTTACTGAACAGCGTCG > SRR4302537.983531/1‑94 (MQ=60)
CGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCG < SRR4302537.3617976/94‑1 (MQ=60)
CGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCG < SRR4302537.1669371/94‑1 (MQ=60)
CGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCG > SRR4302537.6162399/1‑94 (MQ=60)
CGAGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCG > SRR4302537.3437668/1‑94 (MQ=60)
AGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCC < SRR4302537.351730/94‑1 (MQ=60)
AGCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCC < SRR4302537.2514989/94‑1 (MQ=60)
GCAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCC > SRR4302537.3390036/1‑94 (MQ=60)
CAAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCC > SRR4302537.5913393/1‑94 (MQ=60)
AAAATCGTCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCG > SRR4302537.3590620/1‑94 (MQ=60)
AATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCC < SRR4302537.5524254/94‑1 (MQ=60)
TCGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGA < SRR4302537.3787274/94‑1 (MQ=60)
CGAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAG > SRR4302537.329275/1‑94 (MQ=60)
GAGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGG < SRR4302537.1135788/94‑1 (MQ=60)
AGCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGC < SRR4302537.2773197/94‑1 (MQ=60)
GCTGAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCA < SRR4302537.5428898/94‑1 (MQ=60)
GAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCC < SRR4302537.4470261/94‑1 (MQ=60)
GAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCC < SRR4302537.350908/94‑1 (MQ=60)
GAATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCC < SRR4302537.3438769/94‑1 (MQ=60)
AATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCT > SRR4302537.2776621/1‑94 (MQ=60)
ATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTT < SRR4302537.2267957/94‑1 (MQ=60)
ATGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGCGATTGTAAAGGCGATTACTGAACAGAGCCGCCCCGCCAGCGCGGCAGCCTT > SRR4302537.1561314/1‑94 (MQ=60)
TGCCGCGCTCACTCTGCGCCAGGGAACTGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTG < SRR4302537.3984541/94‑1 (MQ=60)
TGCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTG < SRR4302537.3608280/94‑1 (MQ=60)
GCCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGC < SRR4302537.2679897/94‑1 (MQ=60)
CCGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCT < SRR4302537.1166872/94‑1 (MQ=60)
CGCGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTG < SRR4302537.4750307/94‑1 (MQ=60)
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ACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTG > NC_000913/3527052‑3527237
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
