Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 882 254.4 12957588 98.0% 12698436 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,730,028 G→A G67R (GGA→AGA)  xylG → putative ATP‑binding protein of xylose transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,730,0280GA99.7% 1154.6 / NA 324G67R (GGA→AGA) xylGputative ATP‑binding protein of xylose transport system
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (157/166);  minor base C (1/0);  total (158/166)
Fisher's exact test for biased strand distribution p-value = 4.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 345 total aligned reads displayed.

GGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTG  >  NC_000913/3729938‑3730117
                                                                                          |                                                                                         
  ggAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCgagaga                                                                                       <  1:1082657/93‑1 (MQ=255)
  ggAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCgagaga                                                                                       <  2:1606704/93‑1 (MQ=255)
   gAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGagaa                                                                                      <  1:5335877/93‑1 (MQ=255)
     aaaTGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGagaaga                                                                                    <  2:1673751/93‑1 (MQ=255)
     aaaTGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGagaaga                                                                                    <  1:5528312/93‑1 (MQ=255)
     aaaTGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGGATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGagaaga                                                                                    >  1:1150790/1‑93 (MQ=255)
       aTGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGagagaagaga                                                                                  <  1:483023/93‑1 (MQ=255)
       aTGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGagagaagaga                                                                                  >  1:5673341/1‑93 (MQ=255)
       aTGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGagagaagaga                                                                                  <  1:3129590/93‑1 (MQ=255)
        tGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGAt                                                                                 <  2:3217774/93‑1 (MQ=255)
        tGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCACATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGAt                                                                                 <  2:6406720/93‑1 (MQ=255)
          ggTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTc                                                                               <  2:2284367/93‑1 (MQ=255)
          ggTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTc                                                                               >  2:4595375/1‑93 (MQ=255)
          ggTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTc                                                                               <  1:1792119/93‑1 (MQ=255)
           gTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCa                                                                              >  2:4488722/1‑93 (MQ=255)
               ggTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCg                                                                          >  2:4027304/1‑93 (MQ=255)
                 tAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAg                                                                        <  1:3300145/93‑1 (MQ=255)
                 tAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAg                                                                        <  2:3093056/93‑1 (MQ=255)
                  aaaTCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGt                                                                       <  2:5748659/93‑1 (MQ=255)
                  aaaTCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGt                                                                       >  2:2859516/1‑93 (MQ=255)
                  aaaTCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGt                                                                       <  1:1743555/93‑1 (MQ=255)
                   aaTCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTc                                                                      <  2:4217135/93‑1 (MQ=255)
                   aaTCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTc                                                                      <  1:1121618/93‑1 (MQ=255)
                   aaTCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTc                                                                      >  1:5288535/1‑93 (MQ=255)
                    aTCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTca                                                                     >  1:3521584/1‑93 (MQ=255)
                    aTCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTca                                                                     >  2:3901152/1‑93 (MQ=255)
                      cAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTcaca                                                                   >  1:6184041/1‑93 (MQ=255)
                      cAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTcaca                                                                   <  1:1487534/93‑1 (MQ=255)
                       aaCGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACAt                                                                  <  2:1227553/93‑1 (MQ=255)
                       aaCGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACAt                                                                  >  2:3279225/1‑93 (MQ=255)
                        aCGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATc                                                                 <  1:3952720/93‑1 (MQ=255)
                        aCGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATc                                                                 <  1:4287896/93‑1 (MQ=255)
                          gCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCcg                                                               <  1:4760563/93‑1 (MQ=255)
                           cTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCcgc                                                              >  1:4947904/1‑93 (MQ=255)
                           cTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCcgc                                                              >  1:1015804/1‑93 (MQ=255)
                               tgaAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATa                                                          <  1:4730294/93‑1 (MQ=255)
                               tgaAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATa                                                          >  1:965395/1‑93 (MQ=255)
                                    gTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGaa                                                     <  2:432609/93‑1 (MQ=255)
                                     tGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAAc                                                    <  2:1933837/93‑1 (MQ=255)
                                     tGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAAc                                                    <  1:5437909/93‑1 (MQ=255)
                                       cTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTATTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGc                                                  <  1:361029/93‑1 (MQ=255)
                                        tgtgtgGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCa                                                 >  1:2519991/1‑93 (MQ=255)
                                        tgtgtgGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCa                                                 >  2:4835070/1‑93 (MQ=255)
                                        tgtgtgGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCa                                                 >  1:3889801/1‑93 (MQ=255)
                                          tgtgGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCaaa                                               <  1:4674517/93‑1 (MQ=255)
                                          tgtgGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCaaa                                               <  1:5876924/93‑1 (MQ=255)
                                           gtgGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAg                                              <  1:3792074/93‑1 (MQ=255)
                                           gtgGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAg                                              >  1:1614278/1‑93 (MQ=255)
                                             ggTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGt                                            >  2:4166751/1‑93 (MQ=255)
                                              gTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTa                                           >  1:3215408/1‑93 (MQ=255)
                                               tATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTAt                                          >  2:686892/1‑93 (MQ=255)
                                               tATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTAt                                          <  1:404320/93‑1 (MQ=255)
                                                aTTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATc                                         >  2:2608339/1‑93 (MQ=255)
                                                  ttATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATAGc                                       >  1:4496055/1‑93 (MQ=255)
                                                   tATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGcc                                      >  2:5786460/1‑93 (MQ=255)
                                                    aTCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCca                                     <  1:5169/93‑1 (MQ=255)
                                                    aTCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCca                                     <  2:222985/93‑1 (MQ=255)
                                                      ccccATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCcatc                                   <  1:773015/93‑1 (MQ=255)
                                                      ccccATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCcatc                                   <  1:2651320/93‑1 (MQ=255)
                                                      ccccATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCcatc                                   <  2:2161516/93‑1 (MQ=255)
                                                        ccATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCcatcat                                 >  2:5604431/1‑93 (MQ=255)
                                                          aTGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCAtcattc                               <  2:797826/93‑1 (MQ=255)
                                                           tGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATATCGAAAGCAAAGGTATCGCCAtcattca                              >  2:3934667/1‑93 (MQ=255)
                                                           tGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCAtcattca                              >  2:3451430/1‑93 (MQ=255)
                                                            ggCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCAtcattcat                             <  1:2973607/93‑1 (MQ=255)
                                                             gCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATtcatc                            >  1:4226355/1‑93 (MQ=255)
                                                             gCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATtcatc                            <  1:1227001/93‑1 (MQ=255)
                                                              cTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATtcatca                           <  1:3680279/93‑1 (MQ=255)
                                                              cTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATtcatca                           >  2:5537013/1‑93 (MQ=255)
                                                               tCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAg                          >  1:4560723/1‑93 (MQ=255)
                                                                 cTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGa                        >  1:637267/1‑93 (MQ=255)
                                                                 cTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGCCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGa                        >  1:684249/1‑93 (MQ=255)
                                                                 atACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGa                        <  2:2025631/92‑1 (MQ=255)
                                                                  tACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGaa                       >  2:5954413/1‑93 (MQ=255)
                                                                  tACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGaa                       <  2:6056839/93‑1 (MQ=255)
                                                                  tACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGaa                       <  1:5750642/93‑1 (MQ=255)
                                                                   aCGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAAt                      >  2:3674910/1‑93 (MQ=255)
                                                                    cGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCGGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAAtt                     >  1:4402633/1‑93 (MQ=255)
                                                                    cGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAAtt                     >  1:1397034/1‑93 (MQ=255)
                                                                      aaGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTgg                   >  2:6245379/1‑93 (MQ=255)
                                                                      aaGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTgg                   >  2:5736195/1‑93 (MQ=255)
                                                                       aGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGc                  >  1:2014706/1‑93 (MQ=255)
                                                                       aGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGc                  >  2:5336692/1‑93 (MQ=255)
                                                                        ggCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGcc                 <  1:2329470/93‑1 (MQ=255)
                                                                         gCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGccc                <  2:140197/93‑1 (MQ=255)
                                                                         gCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGccc                <  2:5683603/93‑1 (MQ=255)
                                                                          cGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCt               <  2:842078/93‑1 (MQ=255)
                                                                           gAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTg              <  2:4266866/93‑1 (MQ=255)
                                                                            aaaTTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTgg             <  2:6173102/93‑1 (MQ=255)
                                                                            aaaTTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTgg             <  2:5109624/93‑1 (MQ=255)
                                                                             aaTTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGt            <  2:3033370/93‑1 (MQ=255)
                                                                             aaTTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGt            >  2:2067522/1‑93 (MQ=255)
                                                                              attattTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTg           >  1:2245754/1‑93 (MQ=255)
                                                                              attattTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTg           >  1:6239175/1‑93 (MQ=255)
                                                                              attattTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTg           <  2:2424405/93‑1 (MQ=255)
                                                                               ttattTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGa          >  1:4095098/1‑93 (MQ=255)
                                                                               ttattTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGa          >  2:1114805/1‑93 (MQ=255)
                                                                                tattTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGaa         >  1:1914167/1‑93 (MQ=255)
                                                                                 attTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGaaa        >  2:474072/1‑93 (MQ=255)
                                                                                       gCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTg  >  1:2884594/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTG  >  NC_000913/3729938‑3730117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGTGGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCG  >  NC_000913/3729935‑3730121
                                                                                             |                                                                                             
TGTGGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGA                                                                                               >  SRR4302537.377358/1‑94 (MQ=60)
 GTGGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAG                                                                                              >  SRR4302537.6180080/1‑94 (MQ=60)
   GGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAG                                                                                            <  SRR4302537.4395840/94‑1 (MQ=60)
   GGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAG                                                                                            >  SRR4302537.6106789/1‑94 (MQ=60)
     GGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAA                                                                                          <  SRR4302537.1090130/94‑1 (MQ=60)
     GGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAA                                                                                          <  SRR4302537.2987909/94‑1 (MQ=60)
      GAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAG                                                                                         <  SRR4302537.5372463/94‑1 (MQ=60)
      GAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAG                                                                                         <  SRR4302537.5297324/94‑1 (MQ=60)
       AAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGA                                                                                        <  SRR4302537.2271564/94‑1 (MQ=60)
       AAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGA                                                                                        <  SRR4302537.4725164/94‑1 (MQ=60)
       AAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGGATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGA                                                                                        >  SRR4302537.1158790/1‑94 (MQ=60)
        AAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCTCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAG                                                                                       <  SRR4302537.4584478/94‑1 (MQ=60)
        AAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAG                                                                                       <  SRR4302537.5566051/94‑1 (MQ=60)
        AAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAG                                                                                       <  SRR4302537.662772/94‑1 (MQ=60)
        AAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAG                                                                                       >  SRR4302537.875261/1‑94 (MQ=60)
         AATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGA                                                                                      >  SRR4302537.5712161/1‑94 (MQ=60)
          ATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGAT                                                                                     <  SRR4302537.486332/94‑1 (MQ=60)
          ATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGAT                                                                                     <  SRR4302537.3151528/94‑1 (MQ=60)
           TGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATT                                                                                    <  SRR4302537.4896329/94‑1 (MQ=60)
            TGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTC                                                                                   <  SRR4302537.6249294/94‑1 (MQ=60)
            GGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTC                                                                                   <  SRR4302537.1679035/94‑1 (MQ=60)
             GGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCA                                                                                  <  SRR4302537.4773073/94‑1 (MQ=60)
             GGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCA                                                                                  <  SRR4302537.1804629/94‑1 (MQ=60)
             GGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCA                                                                                  >  SRR4302537.2916141/1‑94 (MQ=60)
             GGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCA                                                                                  <  SRR4302537.1456253/94‑1 (MQ=60)
             GGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCA                                                                                  >  SRR4302537.5514887/1‑94 (MQ=60)
              GTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAG                                                                                 <  SRR4302537.3991532/94‑1 (MQ=60)
              GTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAG                                                                                 <  SRR4302537.5869752/94‑1 (MQ=60)
              GTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAG                                                                                 <  SRR4302537.1799841/94‑1 (MQ=60)
               TCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGG                                                                                <  SRR4302537.3637873/94‑1 (MQ=60)
               TCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGG                                                                                <  SRR4302537.3829669/94‑1 (MQ=60)
               TCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGG                                                                                <  SRR4302537.989147/94‑1 (MQ=60)
                CTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGC                                                                               >  SRR4302537.5382264/1‑94 (MQ=60)
                 TGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCG                                                                              >  SRR4302537.4592337/1‑94 (MQ=60)
                 TGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCG                                                                              >  SRR4302537.3581584/1‑94 (MQ=60)
                 TGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCG                                                                              >  SRR4302537.3758267/1‑94 (MQ=60)
                  GGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGA                                                                             >  SRR4302537.1528779/1‑94 (MQ=60)
                   GTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAG                                                                            >  SRR4302537.5592919/1‑94 (MQ=60)
                    TAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGT                                                                           <  SRR4302537.3323480/94‑1 (MQ=60)
                     AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTC                                                                          <  SRR4302537.1755708/94‑1 (MQ=60)
                     AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTC                                                                          >  SRR4302537.1129167/1‑94 (MQ=60)
                     AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTC                                                                          >  SRR4302537.5324889/1‑94 (MQ=60)
                     AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTC                                                                          <  SRR4302537.3701223/94‑1 (MQ=60)
                     AAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTC                                                                          <  SRR4302537.2359872/94‑1 (MQ=60)
                      AATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCA                                                                         <  SRR4302537.1787612/94‑1 (MQ=60)
                      AATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCA                                                                         <  SRR4302537.1129394/94‑1 (MQ=60)
                      AATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCA                                                                         <  SRR4302537.1143854/94‑1 (MQ=60)
                      AATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCA                                                                         >  SRR4302537.3546495/1‑94 (MQ=60)
                       ATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCAC                                                                        >  SRR4302537.4678034/1‑94 (MQ=60)
                        TCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACA                                                                       <  SRR4302537.6405165/94‑1 (MQ=60)
                        TCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACA                                                                       >  SRR4302537.3564215/1‑94 (MQ=60)
                        TCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACA                                                                       >  SRR4302537.6226641/1‑94 (MQ=60)
                         CAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACAT                                                                      <  SRR4302537.1497885/94‑1 (MQ=60)
                         CAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACAT                                                                      >  SRR4302537.6078945/1‑94 (MQ=60)
                          AACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATC                                                                     >  SRR4302537.4499446/1‑94 (MQ=60)
                          AACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATC                                                                     >  SRR4302537.1338023/1‑94 (MQ=60)
                          AACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATC                                                                     >  SRR4302537.3067889/1‑94 (MQ=60)
                           ACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCC                                                                    <  SRR4302537.3980369/94‑1 (MQ=60)
                           ACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCC                                                                    <  SRR4302537.3980370/94‑1 (MQ=60)
                           ACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCC                                                                    <  SRR4302537.4317702/94‑1 (MQ=60)
                           ACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCC                                                                    >  SRR4302537.470022/1‑94 (MQ=60)
                           ACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCC                                                                    <  SRR4302537.4778179/94‑1 (MQ=60)
                           ACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCC                                                                    <  SRR4302537.3802631/94‑1 (MQ=60)
                           ACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCC                                                                    <  SRR4302537.740939/94‑1 (MQ=60)
                           ACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCC                                                                    <  SRR4302537.2542181/94‑1 (MQ=60)
                             GCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGC                                                                  >  SRR4302537.4982015/1‑94 (MQ=60)
                             GCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGC                                                                  >  SRR4302537.1022800/1‑94 (MQ=60)
                             GCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGC                                                                  >  SRR4302537.4773749/1‑94 (MQ=60)
                             GCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGC                                                                  <  SRR4302537.4793444/94‑1 (MQ=60)
                             GCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGC                                                                  >  SRR4302537.5067056/1‑94 (MQ=60)
                              CTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGCCACATCCGCG                                                                 >  SRR4302537.4429840/1‑94 (MQ=60)
                               TGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGA                                                                >  SRR4302537.1156520/1‑94 (MQ=60)
                               TGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGA                                                                >  SRR4302537.4736179/1‑94 (MQ=60)
                               TGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGA                                                                >  SRR4302537.5312469/1‑94 (MQ=60)
                                 ATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATA                                                              >  SRR4302537.4242303/1‑94 (MQ=60)
                                 ATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATA                                                              >  SRR4302537.972054/1‑94 (MQ=60)
                                 ATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTATTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATA                                                              >  SRR4302537.486233/1‑94 (MQ=60)
                                  TGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATAC                                                             >  SRR4302537.5199096/1‑94 (MQ=60)
                                  TGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATAC                                                             <  SRR4302537.4762979/94‑1 (MQ=60)
                                   GAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACC                                                            <  SRR4302537.2368130/94‑1 (MQ=60)
                                    AAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCG                                                           <  SRR4302537.5866452/94‑1 (MQ=60)
                                      AGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAA                                                         >  SRR4302537.127689/1‑94 (MQ=60)
                                       GTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAAC                                                        >  SRR4302537.5637648/1‑94 (MQ=60)
                                       GTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAAC                                                        <  SRR4302537.5428694/94‑1 (MQ=60)
                                       GTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAAC                                                        >  SRR4302537.5785125/1‑94 (MQ=60)
                                        TGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACG                                                       <  SRR4302537.5475007/94‑1 (MQ=60)
                                        TGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACG                                                       >  SRR4302537.2282011/1‑94 (MQ=60)
                                        TGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACG                                                       <  SRR4302537.5939682/94‑1 (MQ=60)
                                          CTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCA                                                     >  SRR4302537.2537687/1‑94 (MQ=60)
                                          CTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCA                                                     <  SRR4302537.4497728/94‑1 (MQ=60)
                                          CTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCA                                                     >  SRR4302537.3917007/1‑94 (MQ=60)
                                          CTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTATTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCA                                                     <  SRR4302537.363540/94‑1 (MQ=60)
                                            GTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAA                                                   >  SRR4302537.5740193/1‑94 (MQ=60)
                                             TGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAG                                                  >  SRR4302537.1625559/1‑94 (MQ=60)
                                             TGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAG                                                  <  SRR4302537.4706853/94‑1 (MQ=60)
                                             TGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAG                                                  <  SRR4302537.5917246/94‑1 (MQ=60)
                                              GTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGG                                                 >  SRR4302537.4459419/1‑94 (MQ=60)
                                              GTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGG                                                 <  SRR4302537.3818687/94‑1 (MQ=60)
                                              GTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGG                                                 >  SRR4302537.6372191/1‑94 (MQ=60)
                                               TGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGCAGAGAATCAGGCGAGTCACCTCTGCGATACCGAAaacacacga                                                >  SRR4302537.1153697/1‑85 (MQ=60)
                                               TGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGT                                                <  SRR4302537.1946310/94‑1 (MQ=60)
                                                GGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTA                                               >  SRR4302537.3238039/1‑94 (MQ=60)
                                                GGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTA                                               >  SRR4302537.2378838/1‑94 (MQ=60)
                                                 GTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTAT                                              <  SRR4302537.1919827/94‑1 (MQ=60)
                                                 GTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTAT                                              >  SRR4302537.5548573/1‑94 (MQ=60)
                                                 GTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTAT                                              <  SRR4302537.5307350/94‑1 (MQ=60)
                                                  TATTTCTCCCCATGGCTCATAAGAAGGCAAATTTTTTTTTGGAAGAAAAGAAATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATC                                             <  SRR4302537.2887193/94‑1 (MQ=38)
                                                  TATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATC                                             <  SRR4302537.3834404/94‑1 (MQ=60)
                                                  TATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATC                                             >  SRR4302537.3674662/1‑94 (MQ=60)
                                                  TATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATC                                             <  SRR4302537.407125/94‑1 (MQ=60)
                                                   ATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCG                                            <  SRR4302537.2028557/94‑1 (MQ=60)
                                                    TTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATAGC                                           >  SRR4302537.4527157/1‑94 (MQ=60)
                                                    TTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCAAGTCACATCCGCGATACCGAACGCAAAGGTATCGC                                           <  SRR4302537.3211839/94‑1 (MQ=60)
                                                     TTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCC                                          <  SRR4302537.657081/94‑1 (MQ=60)
                                                       ATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCAT                                        <  SRR4302537.5209/94‑1 (MQ=60)
                                                        TCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATC                                       >  SRR4302537.5726083/1‑94 (MQ=60)
                                                        TCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATA                                       >  SRR4302537.2804857/1‑94 (MQ=60)
                                                         CCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCA                                      <  SRR4302537.778312/94‑1 (MQ=60)
                                                         CCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCA                                      <  SRR4302537.2669864/94‑1 (MQ=60)
                                                          CCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCAT                                     >  SRR4302537.822661/1‑94 (MQ=60)
                                                          CCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCAT                                     <  SRR4302537.1230124/94‑1 (MQ=60)
                                                           CCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATT                                    >  SRR4302537.4917168/1‑94 (MQ=60)
                                                           CCATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATT                                    <  SRR4302537.1567404/94‑1 (MQ=60)
                                                            CATGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTC                                   <  SRR4302537.3958152/94‑1 (MQ=60)
                                                              TGGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCAT                                 <  SRR4302537.5354731/94‑1 (MQ=60)
                                                               GGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATC                                <  SRR4302537.2994434/94‑1 (MQ=60)
                                                               GGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATC                                >  SRR4302537.4255790/1‑94 (MQ=60)
                                                               GGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATC                                >  SRR4302537.3294059/1‑94 (MQ=60)
                                                               GGCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATC                                >  SRR4302537.3059688/1‑94 (MQ=60)
                                                                GCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCA                               <  SRR4302537.215240/94‑1 (MQ=60)
                                                                GCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCA                               >  SRR4302537.3890193/1‑94 (MQ=60)
                                                                GCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCA                               <  SRR4302537.1235534/94‑1 (MQ=60)
                                                                GCTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCA                               >  SRR4302537.3285877/1‑94 (MQ=60)
                                                                 CTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAG                              >  SRR4302537.4592290/1‑94 (MQ=60)
                                                                 CTCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAG                              <  SRR4302537.3706170/94‑1 (MQ=60)
                                                                  TCCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGG                             >  SRR4302537.4121212/1‑94 (MQ=60)
                                                                   CCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGA                            >  SRR4302537.641603/1‑94 (MQ=60)
                                                                   CCTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGCCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGA                            >  SRR4302537.688940/1‑94 (MQ=60)
                                                                    CTACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAA                           <  SRR4302537.185040/94‑1 (MQ=60)
                                                                     TACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAAT                          <  SRR4302537.5790033/94‑1 (MQ=60)
                                                                     GACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATCCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAAT                          <  SRR4302537.4269415/94‑1 (MQ=60)
                                                                      ACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCGGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATT                         >  SRR4302537.4433012/1‑94 (MQ=60)
                                                                      ACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATT                         >  SRR4302537.1406770/1‑94 (MQ=60)
                                                                      ACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATT                         <  SRR4302537.5363442/94‑1 (MQ=60)
                                                                      ACGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATT                         <  SRR4302537.3047652/94‑1 (MQ=60)
                                                                       CGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTG                        <  SRR4302537.2058591/94‑1 (MQ=60)
                                                                       CGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTG                        >  SRR4302537.1497424/1‑94 (MQ=60)
                                                                       CGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTG                        <  SRR4302537.1092293/94‑1 (MQ=60)
                                                                       CGAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGGATCGCCATCATTCATCAGGAATCG                        >  SRR4302537.697372/1‑94 (MQ=60)
                                                                        GAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGG                       >  SRR4302537.3971471/1‑94 (MQ=60)
                                                                        GAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGG                       >  SRR4302537.3277111/1‑94 (MQ=60)
                                                                        GAAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGG                       >  SRR4302537.2819037/1‑94 (MQ=60)
                                                                         AAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGC                      >  SRR4302537.4826933/1‑94 (MQ=60)
                                                                         AAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGC                      <  SRR4302537.2071335/94‑1 (MQ=60)
                                                                         AAGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGC                      >  SRR4302537.2028750/1‑94 (MQ=60)
                                                                          AGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCC                     <  SRR4302537.1698837/94‑1 (MQ=60)
                                                                          AGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCC                     <  SRR4302537.3390583/94‑1 (MQ=60)
                                                                          AGGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCC                     >  SRR4302537.4004639/1‑94 (MQ=60)
                                                                           GGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCC                    <  SRR4302537.2345899/94‑1 (MQ=60)
                                                                           AGCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCC                    <  SRR4302537.1621718/94‑1 (MQ=60)
                                                                            GCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCT                   <  SRR4302537.4562486/94‑1 (MQ=60)
                                                                            GCGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCT                   <  SRR4302537.5491212/94‑1 (MQ=60)
                                                                             CGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTG                  >  SRR4302537.1062582/1‑94 (MQ=60)
                                                                             CGAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTG                  <  SRR4302537.3209599/94‑1 (MQ=60)
                                                                              GAAATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGG                 >  SRR4302537.1301259/1‑94 (MQ=60)
                                                                                AATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTG               >  SRR4302537.2261598/1‑94 (MQ=60)
                                                                                AATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTG               <  SRR4302537.2785140/94‑1 (MQ=60)
                                                                                AATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTG               >  SRR4302537.6282071/1‑94 (MQ=60)
                                                                                 ATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGA              >  SRR4302537.4123694/1‑94 (MQ=60)
                                                                                 ATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGA              >  SRR4302537.4083213/1‑94 (MQ=60)
                                                                                 ATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGA              <  SRR4302537.1074620/94‑1 (MQ=60)
                                                                                 ATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGA              >  SRR4302537.2620847/1‑94 (MQ=60)
                                                                                 ATTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTCGCCCTGGTGA              >  SRR4302537.962833/1‑94 (MQ=60)
                                                                                  TTATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAA             >  SRR4302537.1927452/1‑94 (MQ=60)
                                                                                   TATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAA            >  SRR4302537.6347921/1‑94 (MQ=60)
                                                                                   TATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAA            >  SRR4302537.4198082/1‑94 (MQ=60)
                                                                                   TATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAA            >  SRR4302537.4915684/1‑94 (MQ=60)
                                                                                    ATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAG           <  SRR4302537.6229094/94‑1 (MQ=60)
                                                                                    ATTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAG           <  SRR4302537.177517/94‑1 (MQ=60)
                                                                                     TTTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGA          >  SRR4302537.1203839/1‑94 (MQ=60)
                                                                                      TTTTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAA         <  SRR4302537.1157769/94‑1 (MQ=60)
                                                                                        TTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATT       <  SRR4302537.3521180/94‑1 (MQ=60)
                                                                                        TTGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGCCATCGCCATCATTCATGAGGAATTGGCCCTGGTGAAAGActg       >  SRR4302537.4194887/1‑91 (MQ=60)
                                                                                         TGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTG      <  SRR4302537.4282641/94‑1 (MQ=60)
                                                                                         TGCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTG      >  SRR4302537.2904837/1‑94 (MQ=60)
                                                                                          GCGAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGA     >  SRR4302537.4269194/1‑94 (MQ=60)
                                                                                            GAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACC   >  SRR4302537.234402/1‑94 (MQ=60)
                                                                                            GAGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACC   <  SRR4302537.889305/94‑1 (MQ=60)
                                                                                             AGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCG  >  SRR4302537.4375720/1‑94 (MQ=60)
                                                                                             AGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCG  <  SRR4302537.4148844/94‑1 (MQ=60)
                                                                                             |                                                                                             
TGTGGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCG  >  NC_000913/3729935‑3730121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: