Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,784,235 |
A→G |
Q450R (CAG→CGG) |
yibO → |
putative 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,784,235 | 0 | A | G | 99.6%
| 880.8
/ NA
| 252 | Q450R (CAG→CGG) | yibO | putative 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (120/130); minor base C (0/1); total (120/132) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 276 total aligned reads displayed.
CGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCAGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAG > NC_000913/3784145‑3784324
|
gcTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTCACCACGGTAACGCTGAGCGGAt < 2:4254569/93‑1 (MQ=255)
gcTGGATCACTGCGTGGAAGAAGTCGAGAAAGCGGTTGAGTCCGTGGGTGGCCAACTGCTGATCACCGCTGCCCACGGTAACGCTGAGCGGAt < 2:3988897/93‑1 (MQ=255)
cTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATg > 1:4270846/1‑93 (MQ=255)
cTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATg > 2:4904465/1‑93 (MQ=255)
cTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATg < 1:1953237/93‑1 (MQ=255)
tGGATCACTGCGTGGAAGAAGTCGCGAAAGAGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATgc > 2:3732319/1‑93 (MQ=255)
gATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATgcgc < 2:467491/93‑1 (MQ=255)
gATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATgcgc > 1:6167426/1‑93 (MQ=255)
aCTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTCACGCTGAGCGGATGCGCGATc > 2:5731552/1‑93 (MQ=255)
aCTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATc > 2:5417962/1‑93 (MQ=255)
cTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATcc < 2:5655730/93‑1 (MQ=255)
gCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCgg > 1:2629901/1‑93 (MQ=255)
tGGAAGAAGTCGCGAAAGCTGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCaa > 2:3676811/1‑93 (MQ=255)
tGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCaa > 2:18543/1‑93 (MQ=255)
ggAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAAc > 2:838166/1‑93 (MQ=255)
gaagaaGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACg > 1:4557108/1‑93 (MQ=255)
aagaagTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACgg > 2:2561706/1‑93 (MQ=255)
agaagTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACggg > 1:2963667/1‑93 (MQ=255)
agaagTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACggg > 1:6103360/1‑93 (MQ=255)
gTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAg > 2:6100853/1‑93 (MQ=255)
tCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAgg > 2:713549/1‑93 (MQ=255)
tCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAgg > 1:968269/1‑93 (MQ=255)
tCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAgg < 2:1342366/93‑1 (MQ=255)
gcgAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggca > 1:246659/1‑93 (MQ=255)
gcgAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggca > 1:6358219/1‑93 (MQ=255)
gAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcaca < 1:5091028/93‑1 (MQ=255)
aaaGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacac > 1:2702888/1‑93 (MQ=255)
aaGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacaca > 2:2182378/1‑93 (MQ=255)
aaGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacaca < 2:2297174/93‑1 (MQ=255)
gCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacacacg < 2:699451/93‑1 (MQ=255)
cGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacacacgg > 1:3724341/1‑93 (MQ=255)
ggTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacacacggc > 2:5142304/1‑93 (MQ=255)
ggTTGAGTCCGTGGGTGGACAACTGCAGATCACCGCTGACCACGGTAAAGCTGAGCGGATGCGTGATCCGGCAACGGGACAggcacacacggc > 2:4089913/1‑93 (MQ=255)
gTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacacacggca > 2:3411838/1‑93 (MQ=255)
gTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacacacggca > 1:1123749/1‑93 (MQ=255)
ttGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacacacggcac > 2:5089780/1‑93 (MQ=255)
tGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacacacggcaca > 2:430676/1‑93 (MQ=255)
aGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAggcacacacggcacaca < 1:1204256/93‑1 (MQ=255)
tCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACAcc < 1:3628877/93‑1 (MQ=255)
tCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACAcc > 2:128617/1‑93 (MQ=255)
tCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACAcc > 1:2335265/1‑93 (MQ=255)
cGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCTGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCaa < 1:1438655/93‑1 (MQ=255)
cGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCaa > 2:769629/1‑93 (MQ=255)
gtgggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACCCACCAAc < 1:3485727/93‑1 (MQ=255)
gtgggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAAc < 2:5885513/93‑1 (MQ=255)
gtgggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAAc < 1:4172392/93‑1 (MQ=255)
tgggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAAcc < 1:3195795/93‑1 (MQ=255)
tgggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAAcc > 1:5718864/1‑93 (MQ=255)
tgggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAAcc > 1:6463989/1‑93 (MQ=255)
gggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGGACACACGGCACACACCAACCt > 2:2644531/1‑93 (MQ=255)
gggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCt < 1:4663399/93‑1 (MQ=255)
ggtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTg > 1:5697089/1‑93 (MQ=255)
gtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGc > 1:1561130/1‑93 (MQ=255)
gtggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGc < 2:2799809/93‑1 (MQ=255)
tggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGACAGGCACACACGGCACACACCAACCTGcc > 2:6276990/1‑93 (MQ=255)
ggACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCa > 2:2365959/1‑93 (MQ=255)
aCAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGt > 2:3262162/1‑93 (MQ=255)
cAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGtt < 2:2976021/93‑1 (MQ=255)
aCTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTcc < 2:6017928/93‑1 (MQ=255)
aCTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTcc > 1:1055381/1‑93 (MQ=255)
tgctgATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGc < 1:4911897/93‑1 (MQ=255)
tgctgATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGc < 1:4713257/93‑1 (MQ=255)
tgctgATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGc > 1:5461489/1‑93 (MQ=255)
gctgATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCt > 1:3850977/1‑93 (MQ=255)
gctgATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCt > 1:3968560/1‑93 (MQ=255)
tgATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGa > 2:3172383/1‑93 (MQ=255)
tgATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGa < 1:3082306/93‑1 (MQ=255)
gATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGAt < 2:876776/93‑1 (MQ=255)
gATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGAt < 1:1723755/93‑1 (MQ=255)
gATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGAt > 1:4350159/1‑93 (MQ=255)
aTCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGAtt < 2:6119639/93‑1 (MQ=255)
tCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGAttt > 1:214035/1‑93 (MQ=255)
cACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTa < 1:713129/93‑1 (MQ=255)
aCCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTAc < 1:5889683/93‑1 (MQ=255)
aCCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTAc > 1:1430209/1‑93 (MQ=255)
ccGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACg > 1:4823460/1‑93 (MQ=255)
cGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGt > 2:3824910/1‑93 (MQ=255)
gCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGtt < 1:5022912/93‑1 (MQ=255)
cTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTg < 1:521418/93‑1 (MQ=255)
cTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTg < 1:3181893/93‑1 (MQ=255)
tGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTgg > 2:3786943/1‑93 (MQ=255)
gACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGt < 1:804180/93‑1 (MQ=255)
aCCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTg > 2:1922766/1‑93 (MQ=255)
aCCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTg > 1:5497638/1‑93 (MQ=255)
ccACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGa < 1:3134625/93‑1 (MQ=255)
aCGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATa < 2:307406/93‑1 (MQ=255)
cgttAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATaa < 2:5052070/90‑1 (MQ=255)
ttcaaCCCTGACCGGATGCCCGATCCGGCAACGGGTCAGGCACACCCGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAg < 2:1534975/90‑1 (MQ=255)
ggTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAg < 1:5418620/93‑1 (MQ=255)
ggaaCGCTGAGCGGATGCGCGATCCGTCAACGGGGCAGCCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGa < 1:1715317/91‑1 (MQ=255)
gTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGa > 1:3044064/1‑93 (MQ=255)
gTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGa > 1:5308702/1‑93 (MQ=255)
gTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGa < 1:1259262/93‑1 (MQ=255)
tAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGaa < 2:6242533/93‑1 (MQ=255)
aaCGATGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACTCGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAAc < 1:4009847/93‑1 (MQ=255)
gCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTg > 1:3593214/1‑93 (MQ=255)
tGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGaa < 1:159939/93‑1 (MQ=255)
gAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGaaa < 2:2109907/93‑1 (MQ=255)
aGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGTCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAg < 1:4997984/93‑1 (MQ=255)
aGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAg < 2:2728915/93‑1 (MQ=255)
|
CGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCAGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAG > NC_000913/3784145‑3784324
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCAGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGGT > NC_000913/3784142‑3784328
|
AAGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCG < SRR4302537.2312510/94‑1 (MQ=60)
AAGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCG < SRR4302537.3632387/94‑1 (MQ=60)
AAGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCG > SRR4302537.6147367/1‑94 (MQ=60)
AAGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGGGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCG > SRR4302537.5481316/1‑94 (MQ=60)
AGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGG < SRR4302537.3272081/94‑1 (MQ=60)
AGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGG < SRR4302537.6044460/94‑1 (MQ=60)
CGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGAT < SRR4302537.5198039/94‑1 (MQ=60)
CGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGAT < SRR4302537.3268888/94‑1 (MQ=60)
CGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGAT > SRR4302537.5978425/1‑94 (MQ=60)
CGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGAT < SRR4302537.3133032/94‑1 (MQ=60)
GCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATG < SRR4302537.5382395/94‑1 (MQ=60)
GCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATG > SRR4302537.5246497/1‑94 (MQ=60)
GCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATG > SRR4302537.4300521/1‑94 (MQ=60)
CTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGC < SRR4302537.1251807/94‑1 (MQ=60)
CTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGC < SRR4302537.1966824/94‑1 (MQ=60)
CTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGGAACGCTGAGCGGATGC > SRR4302537.5514076/1‑94 (MQ=60)
TGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCG < SRR4302537.4128861/94‑1 (MQ=60)
TGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCG < SRR4302537.3688215/94‑1 (MQ=60)
GGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGC > SRR4302537.6209887/1‑94 (MQ=60)
GGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGC > SRR4302537.5027826/1‑94 (MQ=60)
GATCACTGCGTGGAAGAAGTCGCGAAAGTGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCG < SRR4302537.3853376/94‑1 (MQ=60)
GATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCG > SRR4302537.3213928/1‑94 (MQ=60)
GATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGGGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCG > SRR4302537.5086853/1‑94 (MQ=60)
TCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGAT > SRR4302537.134589/1‑94 (MQ=60)
CACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCCCGGTAACGCTGAGCGGATGCGCGATC < SRR4302537.144130/94‑1 (MQ=60)
CACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATC < SRR4302537.546160/94‑1 (MQ=60)
ACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCC > SRR4302537.2716132/1‑94 (MQ=60)
ACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCC > SRR4302537.25932/1‑94 (MQ=60)
ACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGAGGATGCGCGATCC > SRR4302537.3719442/1‑94 (MQ=60)
CTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCG < SRR4302537.1636680/94‑1 (MQ=60)
CTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCG > SRR4302537.6027296/1‑94 (MQ=60)
CTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCG < SRR4302537.1499145/94‑1 (MQ=60)
TGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGG > SRR4302537.2648316/1‑94 (MQ=60)
GCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGC < SRR4302537.761986/94‑1 (MQ=60)
CGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCA > SRR4302537.5892346/1‑94 (MQ=60)
GGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACG > SRR4302537.4588658/1‑94 (MQ=60)
GGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACG < SRR4302537.3643453/94‑1 (MQ=60)
GAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGG > SRR4302537.1734457/1‑94 (MQ=60)
AAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGG > SRR4302537.6145295/1‑94 (MQ=60)
AAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGG > SRR4302537.2984467/1‑94 (MQ=60)
AGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGT < SRR4302537.3134178/94‑1 (MQ=60)
AGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGT < SRR4302537.4266997/94‑1 (MQ=60)
GAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTC < SRR4302537.1591696/94‑1 (MQ=60)
GTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGG > SRR4302537.974947/1‑94 (MQ=60)
CGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCA > SRR4302537.248408/1‑94 (MQ=60)
CGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCA > SRR4302537.6401607/1‑94 (MQ=60)
CGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCA < SRR4302537.2531183/94‑1 (MQ=60)
CGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCA < SRR4302537.4025338/94‑1 (MQ=60)
CGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGCGTCACGCA > SRR4302537.3552471/1‑94 (MQ=60)
GCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCAC < SRR4302537.1221054/94‑1 (MQ=60)
GAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACAC > SRR4302537.2721763/1‑94 (MQ=60)
GAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACAC > SRR4302537.6391832/1‑94 (MQ=60)
GAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACAC < SRR4302537.2310244/94‑1 (MQ=60)
GAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACAC < SRR4302537.5126081/94‑1 (MQ=60)
AGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACG > SRR4302537.1583415/1‑94 (MQ=60)
GCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGG > SRR4302537.3750508/1‑94 (MQ=60)
GCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGG < SRR4302537.5309106/94‑1 (MQ=60)
GCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGG > SRR4302537.2084363/1‑94 (MQ=60)
CGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGC < SRR4302537.2803933/94‑1 (MQ=60)
GGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCA > SRR4302537.1131543/1‑94 (MQ=60)
TGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACAC < SRR4302537.3070105/94‑1 (MQ=60)
GAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACA > SRR4302537.4704106/1‑94 (MQ=60)
GAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACA < SRR4302537.6492973/94‑1 (MQ=60)
AGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACAC < SRR4302537.1212633/94‑1 (MQ=60)
GTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACC > SRR4302537.2351725/1‑94 (MQ=60)
TCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCA < SRR4302537.1561989/94‑1 (MQ=60)
TCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCA < SRR4302537.3654452/94‑1 (MQ=60)
TCCGTGGGTGGACAACTGCTGATCACCGATGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCA < SRR4302537.4842243/94‑1 (MQ=60)
CGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCTGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAAC < SRR4302537.1448658/94‑1 (MQ=60)
CGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGCTCCGGCAACGGGTCAGGCACACACGGCACACACCAAC > SRR4302537.4352671/1‑94 (MQ=60)
CGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAAC > SRR4302537.1176733/1‑94 (MQ=60)
CGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAAC < SRR4302537.4331451/94‑1 (MQ=60)
GTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACCCACCAACC < SRR4302537.3510380/94‑1 (MQ=60)
GTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACC < SRR4302537.4201531/94‑1 (MQ=60)
GTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACC < SRR4302537.4976968/94‑1 (MQ=60)
GTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACC > SRR4302537.6507778/1‑94 (MQ=60)
GTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACC > SRR4302537.5758006/1‑94 (MQ=60)
TGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCT > SRR4302537.5596317/1‑94 (MQ=60)
TGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCT < SRR4302537.2161438/94‑1 (MQ=60)
TGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCT > SRR4302537.1675436/1‑94 (MQ=60)
TGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCT < SRR4302537.3218268/94‑1 (MQ=60)
GGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTG > SRR4302537.5736076/1‑94 (MQ=60)
GGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTG < SRR4302537.4695628/94‑1 (MQ=60)
GGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGC > SRR4302537.1572024/1‑94 (MQ=60)
GGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGC < SRR4302537.3934139/94‑1 (MQ=60)
GGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAG < SRR4302537.4664119/94‑1 (MQ=60)
GGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAG > SRR4302537.2440575/1‑94 (MQ=60)
GGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAG < SRR4302537.3004548/94‑1 (MQ=60)
GACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGT < SRR4302537.5036929/94‑1 (MQ=60)
GACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGT < SRR4302537.651016/94‑1 (MQ=60)
CAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTC > SRR4302537.4869257/1‑94 (MQ=60)
AACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCC > SRR4302537.1062661/1‑94 (MQ=60)
AACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCC < SRR4302537.3195360/94‑1 (MQ=60)
ACTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCG < SRR4302537.120725/94‑1 (MQ=60)
CTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGC > SRR4302537.5555712/1‑94 (MQ=60)
CTGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGC > SRR4302537.5498742/1‑94 (MQ=60)
TGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCT > SRR4302537.3996329/1‑94 (MQ=60)
TGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCT > SRR4302537.3877943/1‑94 (MQ=60)
TGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCT < SRR4302537.4745859/94‑1 (MQ=60)
TGCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCT < SRR4302537.4945799/94‑1 (MQ=60)
GCTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTG < SRR4302537.618296/94‑1 (MQ=60)
CTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGA > SRR4302537.4821241/1‑94 (MQ=60)
CTGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGA > SRR4302537.4910664/1‑94 (MQ=60)
TGATCACCTCTGACCACGGTAACGCTAAGCGGATGCGCGATCCGGCAACGGGTCAGCCACACCCGGCACACACCAACCTGCCAGTTCCGCTGAT < SRR4302537.98724/94‑1 (MQ=60)
TGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGAT > SRR4302537.4380298/1‑94 (MQ=60)
TGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGAT < SRR4302537.1302578/94‑1 (MQ=60)
TGATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGAT < SRR4302537.3103773/94‑1 (MQ=60)
GATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATT < SRR4302537.1735799/94‑1 (MQ=60)
GATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATT < SRR4302537.3241078/94‑1 (MQ=60)
ATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTT > SRR4302537.215560/1‑94 (MQ=60)
ATCACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTT < SRR4302537.5512133/94‑1 (MQ=60)
CACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTAC < SRR4302537.718007/94‑1 (MQ=60)
CACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTAC > SRR4302537.1440167/1‑94 (MQ=60)
CACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACAAACCTGCCAGTTCCGCTGATTTAC < SRR4302537.1741684/94‑1 (MQ=60)
ACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACG > SRR4302537.4856779/1‑94 (MQ=60)
ACCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACG < SRR4302537.5930092/94‑1 (MQ=60)
CCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGT > SRR4302537.2708885/1‑94 (MQ=60)
CCGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGT < SRR4302537.4099747/94‑1 (MQ=60)
CGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTT > SRR4302537.6169814/1‑94 (MQ=60)
CGCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTT > SRR4302537.5741179/1‑94 (MQ=60)
GCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTG < SRR4302537.5057509/94‑1 (MQ=60)
CCTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTG < SRR4302537.961670/94‑1 (MQ=60)
CTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGG > SRR4302537.1112605/1‑94 (MQ=60)
CTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGG < SRR4302537.3204255/94‑1 (MQ=60)
CTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGG < SRR4302537.525005/94‑1 (MQ=60)
CTGACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGG > SRR4302537.3093123/1‑94 (MQ=60)
GACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTG < SRR4302537.809700/94‑1 (MQ=60)
GACCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTG > SRR4302537.5535170/1‑94 (MQ=60)
CCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGAT < SRR4302537.3156623/94‑1 (MQ=60)
CCACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGGCAGGCACACAGGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGAT > SRR4302537.772298/1‑94 (MQ=60)
ACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAA < SRR4302537.5487967/94‑1 (MQ=60)
ACGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAA < SRR4302537.4000063/94‑1 (MQ=60)
CGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAG > SRR4302537.4483201/1‑94 (MQ=60)
CGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAG > SRR4302537.3986845/1‑94 (MQ=60)
CGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAG < SRR4302537.711185/94‑1 (MQ=60)
CGGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAG < SRR4302537.2075940/94‑1 (MQ=60)
GGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGA > SRR4302537.3065271/1‑94 (MQ=60)
GGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGA < SRR4302537.5455553/94‑1 (MQ=60)
GGTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGA > SRR4302537.5345175/1‑94 (MQ=60)
GTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAA < SRR4302537.1268025/94‑1 (MQ=60)
GTAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAA < SRR4302537.3178257/94‑1 (MQ=60)
GGAACGCTGAGCGGATGCGCGATCCGTCAACGGGGCAGCCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAA < SRR4302537.1727294/94‑1 (MQ=60)
TAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAAC < SRR4302537.3603800/94‑1 (MQ=60)
GAACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAAC < SRR4302537.6357007/94‑1 (MQ=60)
AACGCTGGGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACG < SRR4302537.4691262/94‑1 (MQ=60)
AACGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACG < SRR4302537.5797727/94‑1 (MQ=60)
AACGATGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACTCGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACG < SRR4302537.4037920/94‑1 (MQ=60)
CGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTG > SRR4302537.3618544/1‑94 (MQ=60)
CGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTG > SRR4302537.364602/1‑94 (MQ=60)
CGCTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGAACACACCAACCTGCCAGTTACGCTGATTTACGTTGGTGATAAGAACGTG > SRR4302537.5121852/1‑94 (MQ=60)
CTGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAA > SRR4302537.4405988/1‑94 (MQ=60)
TGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAA < SRR4302537.161076/94‑1 (MQ=60)
TGAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAA < SRR4302537.192591/94‑1 (MQ=60)
GAGCGGATGCGCGATCCGGCAACGGGTCAGGCGCACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAG < SRR4302537.2800845/94‑1 (MQ=60)
GAGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAG > SRR4302537.5265740/1‑94 (MQ=60)
AGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGTCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGC < SRR4302537.5032423/94‑1 (MQ=60)
AGCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCACCCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGC < SRR4302537.882734/94‑1 (MQ=60)
GCGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACCCACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCG < SRR4302537.2117113/94‑1 (MQ=60)
CGGATGCGCGATCCGGCAACGGGTCAGGCACACGCGGCACACCCCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGG < SRR4302537.2744800/94‑1 (MQ=60)
CGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGG < SRR4302537.3505187/94‑1 (MQ=60)
CGGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGG < SRR4302537.3345997/94‑1 (MQ=60)
GGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGGT < SRR4302537.3335737/94‑1 (MQ=60)
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AAGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCAGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGGT > NC_000913/3784142‑3784328
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
