Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,881,483 |
Δ1 bp |
intergenic (‑126/‑482) |
dnaA ← / → rpmH |
DnaA/50S ribosomal subunit protein L34 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,881,483 | 0 | G | . | 100.0%
| 1362.1
/ NA
| 288 | intergenic (‑126/‑482) | dnaA/rpmH | DnaA/50S ribosomal subunit protein L34 |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (138/150); total (138/150) |
Only 100 of 292 total aligned reads displayed.
GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT > NC_000913/3881395‑3881569
|
ggCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAg > 2:5642837/1‑93 (MQ=255)
ggCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAg > 1:2239729/1‑93 (MQ=255)
tGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATc < 2:5284005/93‑1 (MQ=255)
aaaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCt > 2:5390363/1‑93 (MQ=255)
aaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTg < 2:2313014/93‑1 (MQ=255)
aaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTg > 2:5689149/1‑93 (MQ=255)
aaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTg < 2:5534351/93‑1 (MQ=255)
ttCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaa > 1:1993726/1‑93 (MQ=255)
cATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAc > 2:4039387/1‑93 (MQ=255)
aTGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACg > 1:998259/1‑93 (MQ=255)
aTGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACg < 2:2857614/93‑1 (MQ=255)
tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGa < 1:95144/93‑1 (MQ=255)
gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt > 1:1806468/1‑93 (MQ=255)
gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt > 2:6022149/1‑93 (MQ=255)
gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt < 1:5285475/93‑1 (MQ=255)
aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc < 2:1588258/93‑1 (MQ=255)
ttgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCg > 1:4265468/1‑93 (MQ=255)
ttgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCg < 1:1054780/93‑1 (MQ=255)
tgttgACGTACGTCGAAAAGGCCCTGCATGAGGGTGACGCACGAACCGCTGTCTGCGTTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg < 2:789446/93‑1 (MQ=255)
tgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg > 1:6121967/1‑93 (MQ=255)
ttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGa < 1:1285401/93‑1 (MQ=255)
tcgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGa < 1:325642/91‑1 (MQ=255)
tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAc < 1:2216855/93‑1 (MQ=255)
tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAc < 2:3750096/93‑1 (MQ=255)
gACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc > 1:415424/1‑93 (MQ=255)
gACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAcc > 2:1262051/1‑93 (MQ=255)
gtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgcg > 1:2536604/1‑93 (MQ=255)
gtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgcg > 1:4432404/1‑93 (MQ=255)
tacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCgg > 1:1468318/1‑93 (MQ=255)
tacgtCGAAAAGACCCTGATTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCgg > 1:2877369/1‑93 (MQ=255)
cgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGAt < 1:1144297/93‑1 (MQ=255)
cGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCAt < 1:1894545/93‑1 (MQ=255)
gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa < 1:5832128/93‑1 (MQ=255)
gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa < 2:1430414/93‑1 (MQ=255)
aaaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAg > 2:3525663/1‑93 (MQ=255)
aaaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAg > 2:4248893/1‑93 (MQ=255)
aaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGc < 1:1672540/93‑1 (MQ=255)
aaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGGCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGc < 1:310760/93‑1 (MQ=255)
aGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCt < 1:3991335/93‑1 (MQ=255)
gACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTa > 1:364816/1‑93 (MQ=255)
gACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTa < 2:2620146/93‑1 (MQ=255)
aCCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaa > 2:1847299/1‑93 (MQ=255)
cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa < 2:4620404/93‑1 (MQ=255)
cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa > 2:2047156/1‑93 (MQ=255)
ccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAc > 2:2177866/1‑93 (MQ=255)
cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt > 1:5651117/1‑93 (MQ=255)
cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt > 2:3324091/1‑93 (MQ=255)
tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg < 1:2625716/93‑1 (MQ=255)
tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg > 2:4933087/1‑93 (MQ=255)
tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg > 1:1721846/1‑93 (MQ=255)
gCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACtac > 1:2957737/1‑91 (MQ=255)
gCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgc < 1:3187571/93‑1 (MQ=255)
ttGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcgc > 2:3040395/1‑93 (MQ=255)
ttGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcgc < 1:4721879/93‑1 (MQ=255)
ttGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcga > 1:3738444/1‑92 (MQ=255)
gAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCaa < 1:4800799/93‑1 (MQ=255)
gAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCaa < 1:3321938/93‑1 (MQ=255)
aGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGAAag > 1:6221461/1‑93 (MQ=255)
gggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAaga < 1:51127/93‑1 (MQ=255)
gggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAaga < 2:3872850/93‑1 (MQ=255)
gggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAaga > 2:2916375/1‑93 (MQ=255)
gTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga > 2:4666645/1‑93 (MQ=255)
tGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAt < 1:4052178/93‑1 (MQ=255)
gACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtc < 2:5813912/93‑1 (MQ=255)
aCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtct < 2:3354897/93‑1 (MQ=255)
aCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACCGCGCAAGAGAtct < 2:2439663/93‑1 (MQ=255)
cGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtctt > 2:3257996/1‑93 (MQ=255)
cGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtctt < 1:587104/93‑1 (MQ=255)
cGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtctt < 2:624000/93‑1 (MQ=255)
gCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttc > 1:772250/1‑93 (MQ=255)
cACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttct > 2:5075317/1‑93 (MQ=255)
cACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttct > 1:5159454/1‑93 (MQ=255)
aCGAACCGCTGTCTACGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACAGAGGATCATAGCCTAAACTGCGCAAGAGATCTTCTg > 2:830329/1‑93 (MQ=255)
cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt > 2:697120/1‑93 (MQ=255)
cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt > 1:3489572/1‑93 (MQ=255)
cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt > 2:2351497/1‑93 (MQ=255)
gAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGtt > 1:1319814/1‑93 (MQ=255)
aCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtc < 1:2784733/93‑1 (MQ=255)
aCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtc < 2:3691102/93‑1 (MQ=255)
ccGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtct > 2:4119335/1‑93 (MQ=255)
gCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTca > 1:5749566/1‑93 (MQ=255)
gCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTca > 1:1568323/1‑93 (MQ=255)
tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa > 2:4846150/1‑93 (MQ=255)
tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa > 2:5095078/1‑93 (MQ=255)
tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa < 1:2402482/93‑1 (MQ=255)
tCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa > 2:1270012/1‑93 (MQ=255)
tCTGCGGTGATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGa > 2:6297845/1‑93 (MQ=255)
cTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAt < 2:901753/93‑1 (MQ=255)
cTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAt > 2:4518164/1‑93 (MQ=255)
cTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAt < 2:2879838/93‑1 (MQ=255)
tGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAtt < 1:2269168/93‑1 (MQ=255)
gCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAttt < 1:3028903/93‑1 (MQ=255)
ggTTATATGCCCGA‑TCAAGACCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTc > 2:3673048/1‑93 (MQ=255)
ttATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTccc < 1:4837598/93‑1 (MQ=255)
ttATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTccc < 2:4901459/93‑1 (MQ=255)
atatGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGa > 2:1047949/1‑93 (MQ=255)
tatGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAt < 1:4775621/93‑1 (MQ=255)
tatGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAt > 2:6412394/1‑93 (MQ=255)
ttGCCCGA‑TCAAGATCCTCCAAACCGACCGGGCCCGCGGATCATACCCAAAACTGCGCAAGAGATTTTCTTTTTCTCACAGTTTTTCCCGAtt < 2:3134818/92‑1 (MQ=255)
tGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAttt > 2:2781897/1‑93 (MQ=255)
|
GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT > NC_000913/3881395‑3881569
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA > NC_000913/3881390‑3881576
|
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAT < SRR4302537.4874502/94‑1 (MQ=60)
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAT < SRR4302537.6390833/94‑1 (MQ=60)
TAAGGCTGAAACATTCATGATTGTTGACGTACGGCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGATGTCTGCGGTTATATGCCCGA‑TCA < SRR4302537.885098/94‑1 (MQ=60)
AAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAA > SRR4302537.594184/1‑94 (MQ=60)
AAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAA > SRR4302537.290679/1‑94 (MQ=60)
AGTCTGAAACATGCATTATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG < SRR4302537.5954211/94‑1 (MQ=60)
AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG < SRR4302537.5385480/94‑1 (MQ=60)
AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG > SRR4302537.4845833/1‑94 (MQ=60)
AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG > SRR4302537.2255520/1‑94 (MQ=60)
GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGA < SRR4302537.3381304/94‑1 (MQ=60)
GCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGAT < SRR4302537.1784798/94‑1 (MQ=60)
CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC > SRR4302537.1415677/1‑94 (MQ=60)
CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC > SRR4302537.5341375/1‑94 (MQ=60)
TGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCC > SRR4302537.2958722/1‑94 (MQ=60)
AAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTG > SRR4302537.2250632/1‑94 (MQ=60)
AACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTTTGCGGTTATATGCCCGA‑TCAAGATCCTGC > SRR4302537.790197/1‑94 (MQ=60)
ACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAAGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCA > SRR4302537.4593473/1‑94 (MQ=60)
CATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAA > SRR4302537.1612469/1‑94 (MQ=60)
CATTCATGATTGTTGACGTACGTAGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGCTTATATGCCCG‑CTCAAGATCCTGCAA > SRR4302537.5148435/1‑94 (MQ=60)
ATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAA > SRR4302537.2451205/1‑94 (MQ=60)
ATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAA > SRR4302537.2007589/1‑94 (MQ=60)
ATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAA > SRR4302537.1312840/1‑94 (MQ=60)
TTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAA > SRR4302537.4891676/1‑94 (MQ=60)
TCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAC < SRR4302537.4495820/94‑1 (MQ=60)
CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG < SRR4302537.4802987/94‑1 (MQ=60)
CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG > SRR4302537.5311928/1‑94 (MQ=60)
CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG > SRR4302537.1005148/1‑94 (MQ=60)
CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG < SRR4302537.1508427/94‑1 (MQ=60)
CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGAGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG > SRR4302537.96320/1‑94 (MQ=60)
ATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCCAAACGA > SRR4302537.5272753/1‑94 (MQ=60)
ATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGA > SRR4302537.262885/1‑94 (MQ=60)
TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT > SRR4302537.1819070/1‑94 (MQ=60)
TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT < SRR4302537.95839/94‑1 (MQ=60)
TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGCCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT > SRR4302537.4036053/1‑94 (MQ=60)
GATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATC < SRR4302537.2003303/94‑1 (MQ=60)
GATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATC < SRR4302537.3071878/94‑1 (MQ=60)
GATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATC < SRR4302537.4026263/94‑1 (MQ=60)
GATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATC < SRR4302537.5321819/94‑1 (MQ=60)
ATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCATGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCG < SRR4302537.2097258/94‑1 (MQ=60)
ATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCG > SRR4302537.4295106/1‑94 (MQ=60)
TTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGG > SRR4302537.6164046/1‑94 (MQ=60)
TTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGG < SRR4302537.1062059/94‑1 (MQ=60)
TGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGG > SRR4302537.439953/1‑94 (MQ=60)
GTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGA < SRR4302537.122909/94‑1 (MQ=60)
TTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAC < SRR4302537.4230854/94‑1 (MQ=60)
TTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAC < SRR4302537.2257926/94‑1 (MQ=60)
TTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAC < SRR4302537.1294343/94‑1 (MQ=60)
TCGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAC < SRR4302537.327899/94‑1 (MQ=60)
TGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACC < SRR4302537.3125273/94‑1 (MQ=60)
TGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACC < SRR4302537.2232485/94‑1 (MQ=60)
TGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACC > SRR4302537.418305/1‑94 (MQ=60)
TGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACC < SRR4302537.2854635/94‑1 (MQ=60)
TGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACC < SRR4302537.337977/94‑1 (MQ=60)
GACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCG < SRR4302537.485466/94‑1 (MQ=60)
CGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCG > SRR4302537.1537986/1‑94 (MQ=60)
CGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCG > SRR4302537.2554402/1‑94 (MQ=60)
CGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCG < SRR4302537.1886891/94‑1 (MQ=60)
CGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCG > SRR4302537.4463012/1‑94 (MQ=60)
CGTACGTCAACAAAACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAACCGATCGGGACCGCG < SRR4302537.5896865/94‑1 (MQ=60)
GTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGG > SRR4302537.3726529/1‑94 (MQ=60)
GTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGG > SRR4302537.1478530/1‑94 (MQ=60)
GTACGTCGAAAAGACCCTGATTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGG > SRR4302537.2897560/1‑94 (MQ=60)
CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC < SRR4302537.1152253/94‑1 (MQ=60)
CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC > SRR4302537.5878267/1‑94 (MQ=60)
GTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCA < SRR4302537.3803169/94‑1 (MQ=60)
CGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATA > SRR4302537.285323/1‑94 (MQ=60)
CGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATA < SRR4302537.1907707/94‑1 (MQ=60)
GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG < SRR4302537.5872098/94‑1 (MQ=60)
GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG < SRR4302537.3255462/94‑1 (MQ=60)
AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC < SRR4302537.1684250/94‑1 (MQ=60)
AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC > SRR4302537.1197092/1‑94 (MQ=60)
AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC > SRR4302537.997222/1‑94 (MQ=60)
AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGGCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC < SRR4302537.312909/94‑1 (MQ=60)
AAGACCCTGCTTGAGGGTGACGCACGAACCGTTGTCTGCGGGTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCT < SRR4302537.1321543/94‑1 (MQ=60)
AGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTA < SRR4302537.4019283/94‑1 (MQ=60)
AGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTA > SRR4302537.367351/1‑94 (MQ=60)
GACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAA < SRR4302537.2452718/94‑1 (MQ=60)
CCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC < SRR4302537.6184494/94‑1 (MQ=60)
CCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC < SRR4302537.5735997/94‑1 (MQ=60)
CCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACT < SRR4302537.434939/94‑1 (MQ=60)
CCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACT > SRR4302537.5689790/1‑94 (MQ=60)
CTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTG > SRR4302537.5868511/1‑94 (MQ=60)
CTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTG > SRR4302537.1733878/1‑94 (MQ=60)
TGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGC < SRR4302537.1124782/94‑1 (MQ=60)
TGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGC > SRR4302537.5699737/1‑94 (MQ=60)
TGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGC < SRR4302537.2644113/94‑1 (MQ=60)
TGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGC < SRR4302537.1395581/94‑1 (MQ=60)
TGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTAC > SRR4302537.2978490/1‑94 (MQ=60)
GCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCG < SRR4302537.3209993/94‑1 (MQ=60)
GCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCG < SRR4302537.3045288/94‑1 (MQ=60)
GCTTGAGGGTGACGCACCAACCGCTGTCTGCTGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCG < SRR4302537.1686896/94‑1 (MQ=60)
CTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGC > SRR4302537.2783078/1‑94 (MQ=60)
CTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGA > SRR4302537.3764695/1‑94 (MQ=60)
TTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCA < SRR4302537.4754520/94‑1 (MQ=60)
TGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAA > SRR4302537.4803169/1‑94 (MQ=60)
GAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAG < SRR4302537.1981714/94‑1 (MQ=60)
GAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAG < SRR4302537.4833919/94‑1 (MQ=60)
GAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAG < SRR4302537.3345436/94‑1 (MQ=60)
GAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGAAAG > SRR4302537.6264288/1‑94 (MQ=60)
GGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAG < SRR4302537.51505/94‑1 (MQ=60)
GGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAG < SRR4302537.5661399/94‑1 (MQ=60)
GGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGA < SRR4302537.3263630/94‑1 (MQ=60)
TGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATC < SRR4302537.4080514/94‑1 (MQ=60)
CGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTC < SRR4302537.591116/94‑1 (MQ=60)
CGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTC > SRR4302537.777541/1‑94 (MQ=60)
GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT < SRR4302537.1846700/94‑1 (MQ=60)
GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT < SRR4302537.4819930/94‑1 (MQ=60)
GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT < SRR4302537.6375360/94‑1 (MQ=60)
GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT > SRR4302537.5195012/1‑94 (MQ=60)
GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGAGCAAGAGATCTTCT > SRR4302537.2235295/1‑94 (MQ=60)
ACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGT > SRR4302537.3514256/1‑94 (MQ=60)
CGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTT > SRR4302537.1329013/1‑94 (MQ=60)
GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT < SRR4302537.3336321/94‑1 (MQ=60)
ACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCT < SRR4302537.2804198/94‑1 (MQ=60)
ACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCT < SRR4302537.2389446/94‑1 (MQ=60)
CCGCTGTCTGCGGTTATATGCCCGA‑TCAATATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTC < SRR4302537.761531/94‑1 (MQ=60)
CCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTC > SRR4302537.4971074/1‑94 (MQ=60)
CCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTC > SRR4302537.3716052/1‑94 (MQ=60)
CGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCA > SRR4302537.5788946/1‑94 (MQ=60)
CGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCA > SRR4302537.1579267/1‑94 (MQ=60)
GCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCAC > SRR4302537.5805486/1‑94 (MQ=60)
CTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA > SRR4302537.3198376/1‑94 (MQ=60)
CTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA > SRR4302537.4176178/1‑94 (MQ=60)
CTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA > SRR4302537.1641752/1‑94 (MQ=60)
TGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAG < SRR4302537.2998317/94‑1 (MQ=60)
TGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAG < SRR4302537.2568569/94‑1 (MQ=60)
GTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGA > SRR4302537.3582975/1‑94 (MQ=60)
GTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATAATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGA > SRR4302537.4107190/1‑94 (MQ=60)
TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT > SRR4302537.5977792/1‑94 (MQ=60)
TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT < SRR4302537.2419398/94‑1 (MQ=60)
TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT > SRR4302537.2960358/1‑94 (MQ=60)
TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT > SRR4302537.2047916/1‑94 (MQ=60)
CTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGGGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATT > SRR4302537.6171962/1‑94 (MQ=60)
CTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATT > SRR4302537.170004/1‑94 (MQ=60)
TGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTT < SRR4302537.2285195/94‑1 (MQ=60)
TGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTT < SRR4302537.2350537/94‑1 (MQ=60)
TGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTT < SRR4302537.1766175/94‑1 (MQ=60)
GCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTT < SRR4302537.3050021/94‑1 (MQ=60)
CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC > SRR4302537.4247171/1‑94 (MQ=60)
GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC < SRR4302537.3160387/94‑1 (MQ=60)
GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC < SRR4302537.3916986/94‑1 (MQ=60)
TTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCG > SRR4302537.2751820/1‑94 (MQ=60)
TTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCG < SRR4302537.4870997/94‑1 (MQ=60)
TATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATATTCTGTTTCTCACAGATTTTCCCGA > SRR4302537.938475/1‑94 (MQ=60)
ATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAT < SRR4302537.3335144/94‑1 (MQ=60)
TATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATT < SRR4302537.4808588/94‑1 (MQ=60)
ATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT > SRR4302537.4810966/1‑94 (MQ=60)
ATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT < SRR4302537.5991486/94‑1 (MQ=60)
GCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTAT > SRR4302537.4789891/1‑94 (MQ=60)
CCGA‑TCAAGATCCTGCAAAACTATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC > SRR4302537.1774935/1‑94 (MQ=60)
CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC < SRR4302537.1894139/94‑1 (MQ=60)
CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC < SRR4302537.3545201/94‑1 (MQ=60)
ATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA > SRR4302537.2796000/1‑94 (MQ=60)
ATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA > SRR4302537.8333/1‑94 (MQ=60)
ATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA > SRR4302537.2944546/1‑94 (MQ=60)
ATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA > SRR4302537.5780230/1‑94 (MQ=60)
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ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA > NC_000913/3881390‑3881576
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
