Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,901,822 |
T→C |
P468P (CCA→CCG) |
bglF ← |
PTS system beta‑glucosides‑specific enzyme IIABC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,901,822 | 0 | T | C | 97.5%
| 779.8
/ 5.8
| 236 | P468P (CCA→CCG) | bglF | PTS system beta‑glucosides‑specific enzyme IIABC component |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base C (115/115); total (118/118) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.71e-01 |
Only 100 of 246 total aligned reads displayed.
AAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGAT > NC_000913/3901732‑3901911
|
aCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGgtg < 1:2882169/93‑1 (MQ=255)
cGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGgtgt < 1:4736363/93‑1 (MQ=255)
gTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGtt < 2:264539/93‑1 (MQ=255)
gTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGtt > 1:413518/1‑93 (MQ=255)
gTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGtt < 1:1993532/93‑1 (MQ=255)
gTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGtt < 1:936105/93‑1 (MQ=255)
gTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGtt > 2:1172332/1‑93 (MQ=255)
gTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGtt < 2:1888376/93‑1 (MQ=255)
tGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGttt > 1:4980827/1‑93 (MQ=255)
ggTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGtttt < 2:1946237/93‑1 (MQ=255)
ggTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGtttt > 2:2121811/1‑93 (MQ=255)
gTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTtc < 1:2964380/93‑1 (MQ=255)
tATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGTTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTtct > 1:1680118/1‑93 (MQ=255)
tATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTtct > 1:606252/1‑93 (MQ=255)
tATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTtct < 1:520302/93‑1 (MQ=255)
aTCAGCGTCGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTtctc < 2:2497419/93‑1 (MQ=255)
aTCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTtctc > 2:4668608/1‑93 (MQ=255)
aTCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTtctc < 1:1256045/93‑1 (MQ=255)
tCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTctct > 1:1026876/1‑93 (MQ=255)
cAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCtt < 1:4369222/93‑1 (MQ=255)
aGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTg > 1:5984210/1‑93 (MQ=255)
aGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTg > 1:2316626/1‑93 (MQ=255)
aGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTg > 2:4338835/1‑93 (MQ=255)
gCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCAGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGc < 1:2356812/93‑1 (MQ=255)
cGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCg < 1:1577501/93‑1 (MQ=255)
gACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCgg < 2:3531311/93‑1 (MQ=255)
gACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCgg > 1:3314072/1‑93 (MQ=255)
gACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTAGTGTAATAACCTCCGGTGTTTTCTCTTGCgg < 2:4910271/93‑1 (MQ=255)
cGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCgggg > 2:1319942/1‑93 (MQ=255)
gTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGc < 2:1329285/93‑1 (MQ=255)
tGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCa > 2:6049491/1‑93 (MQ=255)
gAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCAc > 1:715942/1‑93 (MQ=255)
gAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCAc > 1:6131674/1‑93 (MQ=255)
aaTGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCAcc > 2:3022750/1‑93 (MQ=255)
aaTGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCAcc < 1:2013879/93‑1 (MQ=255)
tGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCt > 2:2908949/1‑93 (MQ=255)
gCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTgcg > 2:4528961/1‑93 (MQ=255)
cGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTgcgc < 2:2300457/93‑1 (MQ=255)
cGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTgcgc < 2:3705839/93‑1 (MQ=255)
cGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTATCTTGCGGGGCACCCTgcgc > 2:3456977/1‑93 (MQ=255)
gCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCgctg < 2:2848144/93‑1 (MQ=255)
gCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCgctg < 1:3979555/93‑1 (MQ=255)
cacaATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCgctgg > 2:2233428/1‑93 (MQ=255)
acaATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCgctggc < 1:3293131/93‑1 (MQ=255)
acaATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCgctggc < 1:451307/93‑1 (MQ=255)
aaTCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCgctggctg < 1:3855040/93‑1 (MQ=255)
aaTCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCgctggctg < 2:76144/93‑1 (MQ=255)
aTCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGa < 2:6340421/93‑1 (MQ=255)
tctctcCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGAc > 2:5163388/1‑93 (MQ=255)
tctctcCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGAc > 1:1856266/1‑93 (MQ=255)
tctcCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGt < 1:5814621/93‑1 (MQ=255)
ctcCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGtt > 2:3661617/1‑93 (MQ=255)
ctcCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGtt < 2:5967421/93‑1 (MQ=255)
tcCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGttt < 1:1508209/93‑1 (MQ=255)
ccGTCATCGGTGAACAGATACCCCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAg > 1:768774/1‑93 (MQ=255)
tCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCgg > 1:6416970/1‑93 (MQ=255)
tCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCgg < 2:3247770/93‑1 (MQ=255)
cATCGGTGAACAGATACCGCCATGCTCAGATGGTGTAGTAACCTCCGGTGTTTTCTCTCGCGGAACTCCCTGCTCTGGTTGACGTTTAGCgct < 2:2085434/93‑3 (MQ=255)
aTCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtg < 1:5063308/93‑1 (MQ=255)
tCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtga > 1:2168628/1‑93 (MQ=255)
tCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtga > 2:6255414/1‑93 (MQ=255)
cGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtgat < 1:4500570/93‑1 (MQ=255)
cGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtgat > 1:3028357/1‑93 (MQ=255)
gAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaa < 2:3194307/93‑1 (MQ=255)
aaCAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaat > 2:2558841/1‑93 (MQ=255)
aaCAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaat < 2:4085609/93‑1 (MQ=255)
aCAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatg > 2:5305130/1‑93 (MQ=255)
cAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatga > 2:3263647/1‑93 (MQ=255)
aGATGCCGCCCTGCTCAGGTGGTATAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatgaa < 2:3951636/93‑1 (MQ=255)
aGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatgaa < 2:1428833/93‑1 (MQ=255)
aGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatgaa > 1:6309877/1‑93 (MQ=255)
gATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAg > 2:1851873/1‑93 (MQ=255)
gATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAg < 1:4248302/93‑1 (MQ=255)
aCCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCAt < 1:1285042/93‑1 (MQ=255)
aCCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCAt > 2:5082887/1‑93 (MQ=255)
cGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCa < 2:2376978/93‑1 (MQ=255)
gCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCAc > 2:1787178/1‑93 (MQ=255)
ccTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCg < 1:1167299/93‑1 (MQ=255)
tGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTa > 1:3907748/1‑93 (MQ=255)
tGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGATGACGTTTAGCGGTGATGAAATGGAGCATCACAGTa > 1:3427210/1‑93 (MQ=255)
gCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTAc < 1:1085393/93‑1 (MQ=255)
tCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTAcca > 1:5936379/1‑92 (MQ=255)
tCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCg > 1:16222/1‑93 (MQ=255)
tCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCg > 1:2538811/1‑93 (MQ=255)
cAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGa < 1:5423710/93‑1 (MQ=255)
cAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGa < 1:2086015/93‑1 (MQ=255)
gtgtAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACGGACAAATg > 2:5736123/1‑93 (MQ=255)
gtAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcg > 2:1550805/1‑93 (MQ=255)
gtAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcg > 1:6181223/1‑93 (MQ=255)
gtAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcg > 1:3646309/1‑93 (MQ=255)
gtAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcg > 2:5237211/1‑93 (MQ=255)
gtAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcg < 1:2506103/93‑1 (MQ=255)
taataaCCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcgc > 1:148912/1‑93 (MQ=255)
ataaCCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCaa < 2:76511/93‑1 (MQ=255)
ataaCCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCaa > 1:835750/1‑93 (MQ=255)
aaCCCCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAAcc < 1:1350060/93‑1 (MQ=255)
ccTCCGGTGTTTTCTCTTGCGGGGGACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCCACGTACCGACAAATGGGCAACCGa > 2:4794849/1‑93 (MQ=255)
ccTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGa < 1:2673964/93‑1 (MQ=255)
ctccGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGAt < 2:5819014/93‑1 (MQ=255)
ctccGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGAt < 1:3697887/93‑1 (MQ=255)
|
AAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGAT > NC_000913/3901732‑3901911
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATGGCA > NC_000913/3901729‑3901915
|
GGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCC < SRR4302537.254643/94‑1 (MQ=60)
CAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGG > SRR4302537.111014/1‑94 (MQ=60)
AAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGT < SRR4302537.2096529/94‑1 (MQ=60)
AACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTG < SRR4302537.513609/94‑1 (MQ=60)
ACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTACTAACCTCCGGTGT > SRR4302537.179253/1‑94 (MQ=60)
ACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGT < SRR4302537.2902398/94‑1 (MQ=60)
CGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTT > SRR4302537.416381/1‑94 (MQ=60)
CGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTT < SRR4302537.4769107/94‑1 (MQ=60)
GTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTT < SRR4302537.942556/94‑1 (MQ=60)
GTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTT > SRR4302537.825501/1‑94 (MQ=60)
GTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTT < SRR4302537.2007393/94‑1 (MQ=60)
GTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTT > SRR4302537.5015153/1‑94 (MQ=60)
TGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTT < SRR4302537.3724859/94‑1 (MQ=60)
GGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTC < SRR4302537.2942984/94‑1 (MQ=60)
GTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGTTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCT > SRR4302537.1691873/1‑94 (MQ=60)
GTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCT < SRR4302537.2985184/94‑1 (MQ=60)
GTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCT > SRR4302537.1943110/1‑94 (MQ=60)
GTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCT > SRR4302537.610396/1‑94 (MQ=60)
TATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTC < SRR4302537.523884/94‑1 (MQ=60)
ATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCT > SRR4302537.1033944/1‑94 (MQ=60)
ATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCT < SRR4302537.1264783/94‑1 (MQ=60)
ATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCT < SRR4302537.1329143/94‑1 (MQ=60)
TCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTT < SRR4302537.2390305/94‑1 (MQ=60)
CAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTG > SRR4302537.1588575/1‑94 (MQ=60)
CAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTG < SRR4302537.4399419/94‑1 (MQ=60)
CAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTG > SRR4302537.2332979/1‑94 (MQ=60)
CAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTG > SRR4302537.6025280/1‑94 (MQ=60)
GCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCG < SRR4302537.1309486/94‑1 (MQ=60)
GCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCG < SRR4302537.59875/94‑1 (MQ=60)
GCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCG < SRR4302537.4014116/94‑1 (MQ=60)
GCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCAGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCG < SRR4302537.2373433/94‑1 (MQ=60)
CGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGG < SRR4302537.1588504/94‑1 (MQ=60)
CGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGG > SRR4302537.3337515/1‑94 (MQ=60)
GACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGG < SRR4302537.1618959/94‑1 (MQ=60)
GTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCA > SRR4302537.3430726/1‑94 (MQ=60)
TGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGTGGGGCAC > SRR4302537.6173824/1‑94 (MQ=60)
TGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCAC > SRR4302537.6173823/1‑94 (MQ=60)
TGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCAC > SRR4302537.720835/1‑94 (MQ=60)
GAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACC > SRR4302537.1374403/1‑94 (MQ=60)
GAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACC > SRR4302537.6144138/1‑94 (MQ=60)
AATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCC < SRR4302537.2027917/94‑1 (MQ=60)
AATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCC < SRR4302537.2027729/94‑1 (MQ=60)
ATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCT < SRR4302537.2554538/94‑1 (MQ=60)
ATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCT > SRR4302537.419120/1‑94 (MQ=60)
TGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTG > SRR4302537.6472997/1‑94 (MQ=60)
GAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGC > SRR4302537.3954060/1‑94 (MQ=60)
GGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTG < SRR4302537.2908430/94‑1 (MQ=60)
GCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGG < SRR4302537.4007410/94‑1 (MQ=60)
ACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCT < SRR4302537.3316404/94‑1 (MQ=60)
ACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCT < SRR4302537.454431/94‑1 (MQ=60)
ACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCT > SRR4302537.2565077/1‑94 (MQ=60)
ACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCT < SRR4302537.6127370/94‑1 (MQ=60)
AATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGA < SRR4302537.3320652/94‑1 (MQ=60)
AATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGA < SRR4302537.3882025/94‑1 (MQ=60)
ATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGAC > SRR4302537.1869195/1‑94 (MQ=60)
ATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGAC < SRR4302537.5349583/94‑1 (MQ=60)
TCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACG < SRR4302537.2084882/94‑1 (MQ=60)
CTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGT > SRR4302537.3025635/1‑94 (MQ=60)
TCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTT < SRR4302537.5854483/94‑1 (MQ=60)
TCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTA < SRR4302537.3245144/94‑1 (MQ=60)
TCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTA > SRR4302537.3659530/1‑94 (MQ=60)
TCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTA < SRR4302537.1518757/94‑1 (MQ=60)
CCCGTCATCGGTGAACAGATACCCCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAG > SRR4302537.774045/1‑94 (MQ=60)
CCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGC < SRR4302537.456694/94‑1 (MQ=60)
GTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGG > SRR4302537.6460609/1‑94 (MQ=60)
TCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGT > SRR4302537.1512440/1‑94 (MQ=60)
CATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTG > SRR4302537.4529928/1‑94 (MQ=60)
ATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGA < SRR4302537.5098158/94‑1 (MQ=60)
ATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGA > SRR4302537.2183905/1‑94 (MQ=60)
TCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGAT < SRR4302537.106503/94‑1 (MQ=60)
TCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGAT > SRR4302537.3049472/1‑94 (MQ=60)
CGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATG < SRR4302537.4531695/94‑1 (MQ=60)
CGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATG > SRR4302537.5984977/1‑94 (MQ=60)
CGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATG < SRR4302537.2297211/94‑1 (MQ=60)
GTGAACAGATGCCGCTCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAA < SRR4302537.3066346/94‑1 (MQ=60)
GTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAA > SRR4302537.4358127/1‑94 (MQ=60)
TGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAA > SRR4302537.5915143/1‑94 (MQ=60)
AACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATG > SRR4302537.3855312/1‑94 (MQ=60)
ACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGA > SRR4302537.933418/1‑94 (MQ=60)
ACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGA < SRR4302537.4513568/94‑1 (MQ=60)
CAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAA > SRR4302537.6353078/1‑94 (MQ=60)
CAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAA < SRR4302537.4871087/94‑1 (MQ=60)
AGATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAG > SRR4302537.2172782/1‑94 (MQ=60)
GATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGC < SRR4302537.6295372/94‑1 (MQ=60)
GATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGC < SRR4302537.4277823/94‑1 (MQ=60)
ATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCA < SRR4302537.6345097/94‑1 (MQ=60)
ATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCA < SRR4302537.1504834/94‑1 (MQ=60)
ATACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCA > SRR4302537.4251975/1‑94 (MQ=60)
TACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCAT > SRR4302537.1551807/1‑94 (MQ=60)
ACCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATC < SRR4302537.1293982/94‑1 (MQ=60)
CCGCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCA > SRR4302537.2321247/1‑94 (MQ=60)
GCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACC < SRR4302537.2364938/94‑1 (MQ=60)
GCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACC < SRR4302537.5818159/94‑1 (MQ=60)
GCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACC > SRR4302537.6450009/1‑94 (MQ=60)
GCCCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACC < SRR4302537.1241435/94‑1 (MQ=60)
CCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGT > SRR4302537.2573469/1‑94 (MQ=60)
CCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGT > SRR4302537.391066/1‑94 (MQ=60)
CCTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGT < SRR4302537.1175416/94‑1 (MQ=60)
CTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTA > SRR4302537.3935065/1‑94 (MQ=60)
CTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTA > SRR4302537.6041330/1‑94 (MQ=60)
CTGCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGATGACGTTTAGCGGTGATGAAATGGAGCATCACAGTA > SRR4302537.3451468/1‑94 (MQ=60)
GCTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACC < SRR4302537.1092883/94‑1 (MQ=60)
CTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCG > SRR4302537.2556620/1‑94 (MQ=60)
CTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCG > SRR4302537.16354/1‑94 (MQ=60)
CTCAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCA > SRR4302537.5977121/1‑94 (MQ=60)
CAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGAC < SRR4302537.6482718/94‑1 (MQ=60)
CAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGAC < SRR4302537.2100723/94‑1 (MQ=60)
CAGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGAC < SRR4302537.5460679/94‑1 (MQ=60)
AGGTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCAGCACCGTACCGACA > SRR4302537.3717881/1‑94 (MQ=60)
GTGGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAA > SRR4302537.5214082/1‑94 (MQ=60)
GGTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATG > SRR4302537.4590861/1‑94 (MQ=60)
GTGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGC < SRR4302537.2406181/94‑1 (MQ=60)
TGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCG > SRR4302537.3671976/1‑94 (MQ=60)
TGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCG < SRR4302537.3945511/94‑1 (MQ=60)
TGTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCG > SRR4302537.6223800/1‑94 (MQ=60)
GTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGC > SRR4302537.1749364/1‑94 (MQ=60)
GTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGC < SRR4302537.2523731/94‑1 (MQ=60)
GTAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGC > SRR4302537.149977/1‑94 (MQ=60)
TAATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCA > SRR4302537.1282149/1‑94 (MQ=60)
AATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAA > SRR4302537.841469/1‑94 (MQ=60)
AATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAA > SRR4302537.72921/1‑94 (MQ=60)
AATAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAA > SRR4302537.933340/1‑94 (MQ=60)
TAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCTACAAATGCGCAACC < SRR4302537.1640826/94‑1 (MQ=60)
TAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACC > SRR4302537.508447/1‑94 (MQ=60)
TAACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACC > SRR4302537.1229974/1‑94 (MQ=60)
AACCCCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCG < SRR4302537.1359466/94‑1 (MQ=60)
ACCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGA > SRR4302537.3658270/1‑94 (MQ=60)
CCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGAT > SRR4302537.4543358/1‑94 (MQ=60)
CCTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGAT < SRR4302537.2692639/94‑1 (MQ=60)
CTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATG < SRR4302537.2840954/94‑1 (MQ=60)
CTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATG < SRR4302537.3723908/94‑1 (MQ=60)
CTCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATG < SRR4302537.5774882/94‑1 (MQ=60)
TCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATGG < SRR4302537.4518769/94‑1 (MQ=60)
TCCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATGG < SRR4302537.2534515/94‑1 (MQ=60)
CCGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATGGC > SRR4302537.1379143/1‑94 (MQ=60)
CGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATGGCA > SRR4302537.3586613/1‑94 (MQ=60)
CGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATGGCA > SRR4302537.163704/1‑94 (MQ=60)
|
GGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCGATGGCA > NC_000913/3901729‑3901915
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
