Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,291,253	T→C	R71R (CGT→CGC)	yraM →	putative glycosylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,291,253	0	T	C	100.0%	1187.9 / NA	343	R71R (CGT→CGC)	yraM	putative glycosylase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (194/149); total (194/149)

Only 100 of 357 total aligned reads displayed.

CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAA  >  NC_000913/3291163‑3291342

cACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCgcgc                                                                                         <  2:2261449/93‑1 (MQ=255)

cACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCgcgc                                                                                         <  1:8389860/93‑1 (MQ=255)

 aCGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCa                                                                                        >  2:7949818/1‑93 (MQ=255)

 aCGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCa                                                                                        >  2:8311254/1‑93 (MQ=255)

  cGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCAc                                                                                       <  1:3078947/93‑1 (MQ=255)

   ggCGCGGGCTGATTCTGCCTTTTACCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGAAATTACTCGCCATTCGCGCCCt                                                                                      <  2:3262630/93‑1 (MQ=255)

     cgcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTgg                                                                                    <  1:4778705/93‑1 (MQ=255)

     cgcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTgg                                                                                    <  2:7677508/93‑1 (MQ=255)

     cgcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTgg                                                                                    <  1:2566822/93‑1 (MQ=255)

       cAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTg                                                                                  <  1:2416162/93‑1 (MQ=255)

        aGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGa                                                                                 <  2:5000853/93‑1 (MQ=255)

          gCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGaaa                                                                               >  1:5519804/1‑93 (MQ=255)

           cTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaag                                                                              >  1:2289860/1‑93 (MQ=255)

           cTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaag                                                                              <  2:4377986/93‑1 (MQ=255)

            ttaTTCTGCCTTTTAACTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaaga                                                                             <  1:8220005/91‑1 (MQ=255)

            tGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaaga                                                                             >  1:520899/1‑93 (MQ=255)

            tGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaaga                                                                             >  1:8111607/1‑93 (MQ=255)

            tGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaaga                                                                             >  2:5326859/1‑93 (MQ=255)

             taTTTTGACTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGTCATTCGCGCACTGGTGAaagaa                                                                            <  2:6931221/92‑1 (MQ=255)

             gATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaa                                                                            >  1:6763206/1‑93 (MQ=255)

             gATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaa                                                                            <  2:5904164/93‑1 (MQ=255)

             gATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaa                                                                            <  2:7142475/93‑1 (MQ=255)

             gATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaa                                                                            >  1:247016/1‑93 (MQ=255)

             gATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATCATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaa                                                                            <  1:3515408/93‑1 (MQ=255)

               ttCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAgg                                                                          >  2:8405589/1‑93 (MQ=255)

               ttCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAgg                                                                          >  2:8189100/1‑93 (MQ=255)

                tCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGt                                                                         <  1:8754489/93‑1 (MQ=255)

                tCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGt                                                                         >  2:8073482/1‑93 (MQ=255)

                  tGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCAATTGCGGCACTGGTGAAGAAAGGaaa                                                                       >  2:4816821/1‑93 (MQ=255)

                   gCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTaaa                                                                      <  2:6624313/93‑1 (MQ=255)

                     cTTTTATCTTCAGCAGATGCAGCAAAGCTCTGAGGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGCAAAAc                                                                    >  2:7078148/1‑93 (MQ=255)

                      ttttATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCAATTCGCGCCCTGGTGAAAGAAGGTAAAAcc                                                                   <  1:4814791/93‑1 (MQ=255)

                        ttATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCgg                                                                 <  1:7598026/93‑1 (MQ=255)

                         tATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCggg                                                                >  1:4253814/1‑93 (MQ=255)

                          aTCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGc                                                               <  1:4056268/93‑1 (MQ=255)

                           tCTTCAGCAGATGCAGCAAAGCTCTGATGATCCCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCa                                                              <  2:5090157/93‑1 (MQ=255)

                           tCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCa                                                              <  1:5429567/93‑1 (MQ=255)

                           tCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCa                                                              <  2:4713969/93‑1 (MQ=255)

                            cTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAg                                                             <  1:6090280/93‑1 (MQ=255)

                             ttCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAgg                                                            <  1:1363515/93‑1 (MQ=255)

                             ttCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAgg                                                            >  1:6407841/1‑93 (MQ=255)

                             ttCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAgg                                                            >  1:1464981/1‑93 (MQ=255)

                              tCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGc                                                           <  2:2666272/93‑1 (MQ=255)

                               cagcagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCg                                                          >  2:2025769/1‑93 (MQ=255)

                               cagcagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCg                                                          <  2:1676101/93‑1 (MQ=255)

                                agcagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCgg                                                         >  2:3209586/1‑93 (MQ=255)

                                agcagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCgg                                                         <  2:7274249/93‑1 (MQ=255)

                                  gagagGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGtt                                                       <  2:6490133/92‑1 (MQ=255)

                                  cagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGtt                                                       <  2:3048605/93‑1 (MQ=255)

                                   agATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTg                                                      >  1:7385417/1‑93 (MQ=255)

                                   agATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTg                                                      <  2:1716933/93‑1 (MQ=255)

                                     aagcaggaAAGCTCTGAAGAATCCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAg                                                    <  2:746527/91‑1 (MQ=255)

                                      tGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgt                                                   >  1:672203/1‑93 (MQ=255)

                                      tGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgt                                                   >  1:3566630/1‑93 (MQ=255)

                                        cagcaAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgttg                                                 >  2:3618179/1‑93 (MQ=255)

                                        cagcaAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgttg                                                 >  1:1713857/1‑93 (MQ=255)

                                         agcaAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgttgt                                                >  1:6296549/1‑93 (MQ=255)

                                         agcaAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgttgt                                                <  1:2041387/93‑1 (MQ=255)

                                            aaaGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTa                                             >  1:3673053/1‑93 (MQ=255)

                                            aaaGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTa                                             >  2:3420877/1‑93 (MQ=255)

                                             aaGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTaa                                            <  1:5914839/93‑1 (MQ=255)

                                              aGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAc                                           >  1:5327139/1‑93 (MQ=255)

                                               gCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAcc                                          <  2:2147264/93‑1 (MQ=255)

                                                 tctGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCaa                                        >  1:3019404/1‑93 (MQ=255)

                                                  ctGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAAc                                       >  2:1917813/1‑93 (MQ=255)

                                                  ctGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGGTGAGTTGTTTAACCAAc                                       >  2:5602046/1‑93 (MQ=255)

                                                       tatACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTAcaa                                  >  1:117070/2‑91 (MQ=255)

                                                       gatACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCg                                  >  2:4274611/1‑93 (MQ=255)

                                                        atACCAGGATCAACTGGCAATTACTCTCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGc                                 <  1:2876278/93‑1 (MQ=255)

                                                          aCCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCaa                               >  1:7311025/1‑93 (MQ=255)

                                                           ccAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAg                              >  1:5752864/1‑93 (MQ=255)

                                                           ccAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAg                              >  2:5731862/1‑93 (MQ=255)

                                                            cAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGa                             >  1:3598031/1‑93 (MQ=255)

                                                              ggATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAc                           >  1:3158500/1‑93 (MQ=255)

                                                              ggATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAc                           <  1:4391066/93‑1 (MQ=255)

                                                              ggATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAc                           >  1:7899511/1‑93 (MQ=255)

                                                              ggATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGGTGAGTTGTTTAACCAACTACCGCAAGAAc                           >  1:6924548/1‑93 (MQ=255)

                                                              ggACCAAATGGGAATTACTCCCCATTGGGGCAGTGGTGAAAGAAGGGAAGACGCCGCAGGCGGTTGAGATGTTTAACCAACTACCGCAAGAAc                           >  2:4617540/1‑93 (MQ=255)

                                                               gATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACt                          <  1:8624768/93‑1 (MQ=255)

                                                                 tCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACtca                        >  2:1187403/1‑91 (MQ=255)

                                                                 tCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGa                        >  1:4651170/1‑93 (MQ=255)

                                                                   aaCTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCCAGAACTGAAc                      >  2:3935481/1‑93 (MQ=255)

                                                                   aaCTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAAc                      <  2:1496309/93‑1 (MQ=255)

                                                                   aaCTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAAc                      <  1:7208221/93‑1 (MQ=255)

                                                                    aCTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACg                     >  1:7090413/1‑93 (MQ=255)

                                                                     cTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGa                    >  1:1049554/1‑93 (MQ=255)

                                                                     cTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGa                    <  2:2836246/93‑1 (MQ=255)

                                                                      tGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGAt                   >  1:4906967/1‑93 (MQ=255)

                                                                      tGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGAt                   >  2:54698/1‑93 (MQ=255)

                                                                        gCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGc                 >  2:1424611/1‑93 (MQ=255)

                                                                         cAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCt                <  2:249700/93‑1 (MQ=255)

                                                                          aaTTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTc               >  2:6350915/1‑93 (MQ=255)

                                                                          aaTTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTc               >  1:4561986/1‑93 (MQ=255)

                                                                            ttACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAg             <  1:2226077/93‑1 (MQ=255)

                                                                             tACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGc            >  2:6249148/1‑93 (MQ=255)

                                                                             tACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGc            <  1:3813710/93‑1 (MQ=255)

                                                                                tCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTc         <  2:2984368/93‑1 (MQ=255)

                                                                                  gCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTcac       >  2:8757556/1‑91 (MQ=255)

                                                                                    cATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCATGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTTGCga     >  1:7439771/1‑93 (MQ=255)

                                                                                      ttCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCgaga   <  1:7761419/93‑1 (MQ=255)

CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAA  >  NC_000913/3291163‑3291342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAACA  >  NC_000913/3291160‑3291346

GGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGC                                                                                               >  SRR4302541.6503828/1‑94 (MQ=60)

  GCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGC                                                                                             >  SRR4302541.6138966/1‑94 (MQ=60)

   CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCA                                                                                            <  SRR4302541.7380260/94‑1 (MQ=60)

   CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCA                                                                                            <  SRR4302541.8480696/94‑1 (MQ=60)

   CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCA                                                                                            <  SRR4302541.3608029/94‑1 (MQ=60)

   CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCA                                                                                            <  SRR4302541.3608030/94‑1 (MQ=60)

    ACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCAC                                                                                           >  SRR4302541.5548964/1‑94 (MQ=60)

    ACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCAC                                                                                           >  SRR4302541.6465523/1‑94 (MQ=60)

    ACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCAC                                                                                           <  SRR4302541.4149287/94‑1 (MQ=60)

    ACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCAC                                                                                           >  SRR4302541.4299094/1‑94 (MQ=60)

    ACGGCCCAGGCTGATTCTGCATTTGATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTCCTCGCCATTCGCGCAC                                                                                           <  SRR4302541.5355638/94‑1 (MQ=60)

     CGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACT                                                                                          <  SRR4302541.3110193/94‑1 (MQ=60)

      GGCGCAGGCTGATTCTGCTTTTTATCGTCAGCAGATGCAGCACAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTG                                                                                         <  SRR4302541.8037499/94‑1 (MQ=60)

      GGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTG                                                                                         >  SRR4302541.5505601/1‑94 (MQ=60)

        CGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGT                                                                                       <  SRR4302541.641568/94‑1 (MQ=60)

        CGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGT                                                                                       >  SRR4302541.442123/1‑94 (MQ=60)

        CGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGT                                                                                       <  SRR4302541.2592552/94‑1 (MQ=60)

        CGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGT                                                                                       <  SRR4302541.4827485/94‑1 (MQ=60)

         GCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTG                                                                                      <  SRR4302541.3332024/94‑1 (MQ=60)

          CAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGAACTGGTGA                                                                                     >  SRR4302541.3080526/1‑94 (MQ=60)

          CAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGA                                                                                     <  SRR4302541.2439961/94‑1 (MQ=60)

           AGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAA                                                                                    >  SRR4302541.4943323/1‑94 (MQ=60)

            GGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAC                                                                                   >  SRR4302541.1061620/1‑94 (MQ=60)

            GGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAA                                                                                   >  SRR4302541.5576307/1‑94 (MQ=60)

             GCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAG                                                                                  <  SRR4302541.2804135/94‑1 (MQ=60)

             GCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAG                                                                                  >  SRR4302541.2312033/1‑94 (MQ=60)

              CTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGTAATTACTCGCCATTCGCGCACTGGTGAAAGA                                                                                 <  SRR4302541.3696191/94‑1 (MQ=60)

              CTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGA                                                                                 >  SRR4302541.8200489/1‑94 (MQ=60)

              CTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGA                                                                                 >  SRR4302541.525775/1‑94 (MQ=60)

               TTATTCTGCCTTTTAACTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAA                                                                                <  SRR4302541.8309658/94‑1 (MQ=60)

               TGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCGCTGGTGAAAGAA                                                                                >  SRR4302541.5333850/1‑94 (MQ=60)

               TGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAA                                                                                <  SRR4302541.3388249/94‑1 (MQ=60)

               TGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAA                                                                                >  SRR4302541.6835531/1‑94 (MQ=60)

               TGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAA                                                                                >  SRR4302541.248990/1‑94 (MQ=60)

               TGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAA                                                                                >  SRR4302541.1449721/1‑94 (MQ=60)

                GATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATCATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAG                                                                               <  SRR4302541.3550762/94‑1 (MQ=60)

                 ATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGG                                                                              >  SRR4302541.8266902/1‑94 (MQ=60)

                  TTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGT                                                                             >  SRR4302541.5391296/1‑94 (MQ=60)

                   TCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTA                                                                            <  SRR4302541.8848138/94‑1 (MQ=60)

                    CTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAA                                                                           <  SRR4302541.4861403/94‑1 (MQ=60)

                    CTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAA                                                                           >  SRR4302541.4059240/1‑94 (MQ=60)

                    CTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAA                                                                           >  SRR4302541.2524679/1‑94 (MQ=60)

                    CTGCCTTTTATCTTAAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGGGAAAGAAGGGAA                                                                           >  SRR4302541.2600163/1‑94 (MQ=60)

                     TGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAA                                                                          >  SRR4302541.7476879/1‑94 (MQ=60)

                     TGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAA                                                                          >  SRR4302541.7476878/1‑94 (MQ=60)

                      GCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAA                                                                         >  SRR4302541.722424/1‑94 (MQ=60)

                       CCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATCCCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAAC                                                                        <  SRR4302541.8576294/94‑1 (MQ=60)

                       CCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTCCTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAAC                                                                        >  SRR4302541.758228/1‑94 (MQ=60)

                        CTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACC                                                                       >  SRR4302541.8132240/1‑94 (MQ=60)

                         TTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCAATTCGCGCCCTGGTGAAAGAAGGTAAAACCG                                                                      <  SRR4302541.4863883/94‑1 (MQ=60)

                          TTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGG                                                                     <  SRR4302541.2294104/94‑1 (MQ=60)

                           TTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGG                                                                    <  SRR4302541.7679206/94‑1 (MQ=60)

                           TTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGG                                                                    >  SRR4302541.4296323/1‑94 (MQ=60)

                           TTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGG                                                                    <  SRR4302541.3678623/94‑1 (MQ=60)

                             ATCTTCAGCAGATGCAGCAAAGCTCTGATTATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCA                                                                  <  SRR4302541.3747063/94‑1 (MQ=60)

                             ATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCA                                                                  <  SRR4302541.3109902/94‑1 (MQ=60)

                             ATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCA                                                                  <  SRR4302541.4096295/94‑1 (MQ=60)

                              TCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAG                                                                 <  SRR4302541.5485272/94‑1 (MQ=60)

                               CTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGG                                                                >  SRR4302541.6223734/1‑94 (MQ=60)

                               CTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGG                                                                >  SRR4302541.6473204/1‑94 (MQ=60)

                               CTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGG                                                                >  SRR4302541.1479330/1‑94 (MQ=60)

                               CTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGG                                                                <  SRR4302541.6152445/94‑1 (MQ=60)

                                TTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGC                                                               >  SRR4302541.6522776/1‑94 (MQ=60)

                                TTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGC                                                               <  SRR4302541.1376954/94‑1 (MQ=60)

                                 TCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCG                                                              <  SRR4302541.1276842/94‑1 (MQ=60)

                                  CAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGG                                                             >  SRR4302541.1414503/1‑94 (MQ=60)

                                  CAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGG                                                             <  SRR4302541.3577240/94‑1 (MQ=60)

                                   AGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGT                                                            <  SRR4302541.7106202/94‑1 (MQ=60)

                                    GCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTT                                                           >  SRR4302541.7413062/1‑94 (MQ=60)

                                    GCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTT                                                           <  SRR4302541.1354099/94‑1 (MQ=60)

                                    GCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTT                                                           <  SRR4302541.3020787/94‑1 (MQ=60)

                                     CAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTG                                                          >  SRR4302541.7464384/1‑94 (MQ=60)

                                     CAGACGCAGCAAATCTCTGATGATACCAGGATCGACTGGCAATTACTCGCCATTCGCGCACTGGTAAAAGAAGGTAAAACCGGGCAGGCGGTTG                                                          <  SRR4302541.8577135/94‑1 (MQ=60)

                                      AGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGA                                                         >  SRR4302541.7535407/1‑94 (MQ=60)

                                      AGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGA                                                         >  SRR4302541.7221518/1‑94 (MQ=60)

                                      AGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGA                                                         >  SRR4302541.5110832/1‑94 (MQ=60)

                                      AGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGA                                                         >  SRR4302541.211161/1‑94 (MQ=60)

                                       GATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAG                                                        <  SRR4302541.2952371/94‑1 (MQ=60)

                                       GATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAG                                                        <  SRR4302541.4977969/94‑1 (MQ=60)

                                        ATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGT                                                       <  SRR4302541.985446/94‑1 (MQ=60)

                                        ATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGT                                                       >  SRR4302541.678552/1‑94 (MQ=60)

                                        ATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGT                                                       >  SRR4302541.4948051/1‑94 (MQ=60)

                                        ATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGT                                                       <  SRR4302541.3586964/94‑1 (MQ=60)

                                        ATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGT                                                       >  SRR4302541.3602746/1‑94 (MQ=60)

                                         TGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTT                                                      >  SRR4302541.5848828/1‑94 (MQ=60)

                                          GCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTG                                                     >  SRR4302541.1730628/1‑94 (MQ=60)

                                           CAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGT                                                    >  SRR4302541.7224680/1‑94 (MQ=60)

                                           CAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGT                                                    >  SRR4302541.6360892/1‑94 (MQ=60)

                                            AGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTT                                                   >  SRR4302541.2464973/1‑94 (MQ=60)

                                            AGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTT                                                   >  SRR4302541.6821622/1‑94 (MQ=60)

                                            AGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTT                                                   <  SRR4302541.2061089/94‑1 (MQ=60)

                                             GCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTT                                                  >  SRR4302541.4786926/1‑94 (MQ=60)

                                             GCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTT                                                  >  SRR4302541.7770293/1‑94 (MQ=60)

                                              CAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTA                                                 >  SRR4302541.2455731/1‑94 (MQ=60)

                                              CAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTA                                                 >  SRR4302541.2245825/1‑94 (MQ=60)

                                              CAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTA                                                 >  SRR4302541.3710289/1‑94 (MQ=60)

                                               AAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAA                                                >  SRR4302541.4403852/1‑94 (MQ=60)

                                                AAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAC                                               <  SRR4302541.5975054/94‑1 (MQ=60)

                                                AAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAC                                               >  SRR4302541.5381951/1‑94 (MQ=60)

                                                   CTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAA                                            >  SRR4302541.8142170/1‑94 (MQ=60)

                                                   CTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAA                                            >  SRR4302541.3049884/1‑94 (MQ=60)

                                                   CTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAA                                            >  SRR4302541.5395746/1‑94 (MQ=60)

                                                     CTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACT                                          >  SRR4302541.8831562/1‑94 (MQ=60)

                                                     CTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACT                                          >  SRR4302541.6719349/1‑94 (MQ=60)

                                                      TGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTA                                         <  SRR4302541.1555578/94‑1 (MQ=60)

                                                        ATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACC                                       >  SRR4302541.3733881/1‑94 (MQ=60)

                                                        ATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACC                                       <  SRR4302541.1987345/94‑1 (MQ=60)

                                                        ATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACC                                       <  SRR4302541.7693666/94‑1 (MQ=60)

                                                        ATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACC                                       <  SRR4302541.473443/94‑1 (MQ=60)

                                                         TTATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACaa                                      >  SRR4302541.118013/1‑92 (MQ=60)

                                                         TGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCG                                      <  SRR4302541.6818902/94‑1 (MQ=60)

                                                          GATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGC                                     >  SRR4302541.4910753/1‑94 (MQ=60)

                                                           ATACCAGGATCAACTGGCAATTACTCTCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCA                                    <  SRR4302541.2905138/94‑1 (MQ=60)

                                                           ATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCA                                    >  SRR4302541.4438185/1‑94 (MQ=60)

                                                           ATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCA                                    <  SRR4302541.8114264/94‑1 (MQ=60)

                                                            TACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAA                                   >  SRR4302541.7389070/1‑94 (MQ=60)

                                                            TACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAA                                   >  SRR4302541.7389069/1‑94 (MQ=60)

                                                             ACCAGGATCAACTGGCAATTACTCGCCATTCGCGCCCTGGTGACAGCAGGTAACACCGGCCCGGCGGTTGAGCTGTTTAACCCACTAACGCACG                                  >  SRR4302541.5811430/1‑94 (MQ=38)

                                                             ACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAG                                  >  SRR4302541.5811431/1‑94 (MQ=60)

                                                             ACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAG                                  <  SRR4302541.8431847/94‑1 (MQ=60)

                                                             ACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAG                                  <  SRR4302541.473421/94‑1 (MQ=60)

                                                              CCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGA                                 >  SRR4302541.3634522/1‑94 (MQ=60)

                                                              CCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGA                                 <  SRR4302541.2041847/94‑1 (MQ=60)

                                                               CAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAA                                >  SRR4302541.7962978/1‑94 (MQ=60)

                                                                AGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTACCCAACTACCGCACGAAC                               >  SRR4302541.7032851/1‑94 (MQ=60)

                                                                AGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAC                               >  SRR4302541.7986392/1‑94 (MQ=60)

                                                                AGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAC                               >  SRR4302541.238784/1‑94 (MQ=60)

                                                                AGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAC                               <  SRR4302541.2090496/94‑1 (MQ=60)

                                                                AGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAC                               >  SRR4302541.3190392/1‑94 (MQ=60)

                                                                AGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGGTGAGTTGTTTAACCAACTACCGCAAGAAC                               >  SRR4302541.6998444/1‑94 (MQ=60)

                                                                AGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGAGGTTGAGGTGTTTAACCAACTACCGCAAGAAC                               >  SRR4302541.3134675/1‑94 (MQ=60)

                                                                 GGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACT                              <  SRR4302541.745880/94‑1 (MQ=60)

                                                                 GGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACT                              <  SRR4302541.4434990/94‑1 (MQ=60)

                                                                  GATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTG                             <  SRR4302541.2360709/94‑1 (MQ=60)

                                                                  GATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTG                             <  SRR4302541.8717215/94‑1 (MQ=60)

                                                                  GATCAACTGGCAATAGCTCGACATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGACGGATGAGTTGTTTAACCAACTACCGAAAGAACTG                             <  SRR4302541.7908468/94‑1 (MQ=60)

                                                                   ATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGA                            <  SRR4302541.4435952/94‑1 (MQ=60)

                                                                   ATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGA                            >  SRR4302541.4698523/1‑94 (MQ=60)

                                                                   ATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGA                            <  SRR4302541.6294266/94‑1 (MQ=60)

                                                                   ATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGA                            >  SRR4302541.6951796/1‑94 (MQ=60)

                                                                    TCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAA                           >  SRR4302541.824198/1‑94 (MQ=60)

                                                                     CAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAAC                          <  SRR4302541.3695456/94‑1 (MQ=60)

                                                                     CAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGCTGAGTTGTTTAACCAACTACCGCAAGAACTGAAC                          >  SRR4302541.8658056/1‑94 (MQ=60)

                                                                      AACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACG                         >  SRR4302541.7165843/1‑94 (MQ=60)

                                                                      AACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACG                         >  SRR4302541.3318499/1‑94 (MQ=60)

                                                                      AACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACG                         <  SRR4302541.7285110/94‑1 (MQ=60)

                                                                       ACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGA                        >  SRR4302541.1059304/1‑94 (MQ=60)

                                                                        CTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGAT                       >  SRR4302541.2415264/1‑94 (MQ=60)

                                                                        CTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGAT                       >  SRR4302541.4957028/1‑94 (MQ=60)

                                                                        CTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGAT                       >  SRR4302541.4856932/1‑94 (MQ=60)

                                                                         TGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATG                      >  SRR4302541.6078546/1‑94 (MQ=60)

                                                                          GGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGC                     >  SRR4302541.5279901/1‑94 (MQ=60)

                                                                           GCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCT                    <  SRR4302541.5928896/94‑1 (MQ=60)

                                                                           GCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCT                    >  SRR4302541.3182614/1‑94 (MQ=60)

                                                                            CAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTC                   >  SRR4302541.4608168/1‑94 (MQ=60)

                                                                            CAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTC                   <  SRR4302541.6942167/94‑1 (MQ=60)

                                                                             AATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCACCTACCGCAAGAACTGAACGATGCTCA                  >  SRR4302541.6445900/1‑94 (MQ=60)

                                                                             AATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCA                  <  SRR4302541.1617751/94‑1 (MQ=60)

                                                                             AATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCA                  >  SRR4302541.4675416/1‑94 (MQ=60)

                                                                             AATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCA                  >  SRR4302541.3906659/1‑94 (MQ=60)

                                                                             AATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCA                  <  SRR4302541.1212107/94‑1 (MQ=60)

                                                                              ATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGTGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAG                 <  SRR4302541.6884038/94‑1 (MQ=60)

                                                                              ATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAG                 <  SRR4302541.7415393/94‑1 (MQ=60)

                                                                               TTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGC                <  SRR4302541.2247649/94‑1 (MQ=60)

                                                                               TTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGC                >  SRR4302541.1158330/1‑94 (MQ=60)

                                                                               TTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGC                <  SRR4302541.7742308/94‑1 (MQ=60)

                                                                                TACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCG               <  SRR4302541.6148217/94‑1 (MQ=60)

                                                                                TACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCG               >  SRR4302541.5761374/1‑94 (MQ=60)

                                                                                TACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCG               >  SRR4302541.3100462/1‑94 (MQ=60)

                                                                                TACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCG               <  SRR4302541.461488/94‑1 (MQ=60)

                                                                                TACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCG               <  SRR4302541.3852119/94‑1 (MQ=60)

                                                                                  CTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTC             <  SRR4302541.2463430/94‑1 (MQ=60)

                                                                                  CTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTC             >  SRR4302541.4589012/1‑94 (MQ=60)

                                                                                  CTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTC             >  SRR4302541.2564498/1‑94 (MQ=60)

                                                                                  CTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTC             >  SRR4302541.6628342/1‑94 (MQ=60)

                                                                                  CTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTC             <  SRR4302541.2252705/94‑1 (MQ=60)

                                                                                   TCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCG            >  SRR4302541.1582444/1‑94 (MQ=60)

                                                                                   TCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCG            >  SRR4302541.5670996/1‑94 (MQ=60)

                                                                                   TCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCG            <  SRR4302541.3801570/94‑1 (MQ=60)

                                                                                     GCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCG          <  SRR4302541.390105/94‑1 (MQ=60)

                                                                                     GCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCG          <  SRR4302541.5410490/94‑1 (MQ=60)

                                                                                      CCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCATGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTTGCGA         >  SRR4302541.7519279/1‑94 (MQ=60)

                                                                                      CCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGA         >  SRR4302541.3561823/1‑94 (MQ=60)

                                                                                       CATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAG        >  SRR4302541.7361904/1‑94 (MQ=60)

                                                                                       CATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAG        >  SRR4302541.8478600/1‑94 (MQ=60)

                                                                                         TTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAA      <  SRR4302541.7843997/94‑1 (MQ=60)

                                                                                         TTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAA      >  SRR4302541.2690679/1‑94 (MQ=60)

                                                                                         TTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAA      <  SRR4302541.8830074/94‑1 (MQ=60)

                                                                                         TTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAA      <  SRR4302541.4142317/94‑1 (MQ=60)

                                                                                          TCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAA     <  SRR4302541.8437128/94‑1 (MQ=60)

                                                                                             CGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAACA  >  SRR4302541.1130482/1‑94 (MQ=60)

GGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAACA  >  NC_000913/3291160‑3291346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`