Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,291,253 |
T→C |
R71R (CGT→CGC) |
yraM → |
putative glycosylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,291,253 | 0 | T | C | 100.0%
| 733.2
/ NA
| 210 | R71R (CGT→CGC) | yraM | putative glycosylase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (101/109); total (101/109) |
Only 100 of 215 total aligned reads displayed.
CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAA > NC_000913/3291163‑3291342
|
cGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCAc < 1:5731824/93‑1 (MQ=255)
ggCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACt > 1:3165726/1‑93 (MQ=255)
gcgcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTg > 2:2359895/1‑93 (MQ=255)
gcgcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTg > 1:2664407/1‑93 (MQ=255)
cgcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTgg < 2:6100637/93‑1 (MQ=255)
cgcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTgg > 2:3641720/1‑93 (MQ=255)
gcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGt < 1:1458609/93‑1 (MQ=255)
gcAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGt < 2:202024/93‑1 (MQ=255)
cAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTg < 2:464766/93‑1 (MQ=255)
cAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTg < 2:1446407/93‑1 (MQ=255)
ggCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCCCTGGTGaa > 1:1120259/1‑93 (MQ=255)
ggCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGaa > 1:3345815/1‑93 (MQ=255)
ggCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGaa > 1:1911158/1‑93 (MQ=255)
gCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGaaa > 1:3928595/1‑93 (MQ=255)
tGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaaga > 2:3012188/1‑93 (MQ=255)
gATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaa < 2:203216/93‑1 (MQ=255)
gATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaa > 2:1839294/1‑93 (MQ=255)
gATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaa > 2:725217/1‑93 (MQ=255)
aTTCTTCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAaagaag < 1:2583325/93‑1 (MQ=255)
ttCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAgg < 1:205090/93‑1 (MQ=255)
ttCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAgg < 2:3746614/93‑1 (MQ=255)
tCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGt < 1:5050801/93‑1 (MQ=255)
tCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGt < 2:2790087/93‑1 (MQ=255)
cTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTa > 2:5081235/1‑93 (MQ=255)
tGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTaa > 1:3670048/1‑93 (MQ=255)
gCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTaaa < 2:4992717/93‑1 (MQ=255)
gCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTaaa < 1:1197556/93‑1 (MQ=255)
ccTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTaaaa > 1:6477463/1‑93 (MQ=255)
ctgttATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAAc < 1:2121579/90‑1 (MQ=255)
tATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCggg > 1:6229149/1‑93 (MQ=255)
aTCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGc > 2:6438752/1‑93 (MQ=255)
tCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCa < 2:3323271/93‑1 (MQ=255)
tCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCa > 1:3998295/1‑93 (MQ=255)
cTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAg < 1:3120170/93‑1 (MQ=255)
ttCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAgg < 1:3857746/93‑1 (MQ=255)
tCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGc > 1:1075012/1‑93 (MQ=255)
tCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGc < 1:6420804/93‑1 (MQ=255)
tCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGc < 2:4046485/93‑1 (MQ=255)
tCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGc < 2:5593413/93‑1 (MQ=255)
cagcagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCg > 2:4807341/1‑93 (MQ=255)
agcagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCgg < 1:2481062/93‑1 (MQ=255)
gcagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGt < 1:4016696/93‑1 (MQ=255)
gcagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGt > 2:5453051/1‑93 (MQ=255)
cagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGtt > 2:3504241/1‑93 (MQ=255)
cagATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGtt < 2:3260259/93‑1 (MQ=255)
cagATGCAGCAAAGCTCTGATCATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGtt < 2:2236222/93‑1 (MQ=255)
agATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTg > 2:6468759/1‑93 (MQ=255)
aTGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAg < 2:3420736/93‑1 (MQ=255)
tGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgt < 2:5508342/93‑1 (MQ=255)
tGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgt < 1:5480963/93‑1 (MQ=255)
tGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgt < 2:1228671/93‑1 (MQ=255)
cagcaAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgttg < 1:4509931/93‑1 (MQ=255)
gcaAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAgttgtt > 1:4809637/1‑93 (MQ=255)
aaaGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTa > 2:4107159/1‑93 (MQ=255)
aaGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTaa > 2:4541890/1‑93 (MQ=255)
aGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAc < 2:1584667/93‑1 (MQ=255)
aGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGGTGAGTTGTTTAAc > 2:2532919/1‑93 (MQ=255)
gCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAcc > 1:1012914/1‑93 (MQ=255)
ctctGATGATACCAGGATCAACTGGCAATTGCTCGCCATTCGCGCACTGGTGAAAGAAAGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCa < 1:3291103/93‑1 (MQ=255)
ctctGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCa < 1:4967786/93‑1 (MQ=255)
tgatgaTACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACt > 1:5999315/1‑93 (MQ=255)
gatgatACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTa < 1:2084160/93‑1 (MQ=255)
tgatACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTAcc < 2:2645509/93‑1 (MQ=255)
atACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGc > 2:3682662/1‑93 (MQ=255)
tACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCa > 1:2286081/1‑93 (MQ=255)
aCCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGCGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCaa > 2:5631248/1‑93 (MQ=255)
ccAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAg < 2:5129100/93‑1 (MQ=255)
ccAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAg < 1:5846528/93‑1 (MQ=255)
cAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGa > 1:5956792/1‑93 (MQ=255)
ggATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAc > 1:5565117/1‑93 (MQ=255)
aTCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTg > 2:2448595/1‑93 (MQ=255)
aTCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTg > 2:2270255/1‑93 (MQ=255)
tCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGa < 2:6293088/93‑1 (MQ=255)
tCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGa > 1:5426127/1‑93 (MQ=255)
cAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGaa < 2:4277619/93‑1 (MQ=255)
ggCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATg > 1:1781616/1‑93 (MQ=255)
ggCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATg < 2:93434/93‑1 (MQ=255)
ggCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATg > 1:4610137/1‑93 (MQ=255)
gCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGc < 2:1397474/93‑1 (MQ=255)
aaTTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTc > 1:4357608/1‑93 (MQ=255)
aaTTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTc < 2:1639323/93‑1 (MQ=255)
aTTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCa > 1:1647843/1‑93 (MQ=255)
aTTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCa < 2:2154043/93‑1 (MQ=255)
tACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGc < 1:3467738/93‑1 (MQ=255)
tcTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCg < 1:5105719/92‑1 (MQ=255)
aCTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCg > 2:2811205/1‑93 (MQ=255)
tCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTc < 1:83820/93‑1 (MQ=255)
gCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTcgc > 2:1065718/1‑93 (MQ=255)
gCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTcgc > 1:6175998/1‑93 (MQ=255)
gCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTcgc > 1:5945705/1‑93 (MQ=255)
gCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTcgc < 1:560475/93‑1 (MQ=255)
cATTCGCGCAGTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCga < 1:6185830/93‑1 (MQ=255)
cATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCga < 2:4491358/93‑1 (MQ=255)
cATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCga > 1:3625039/1‑93 (MQ=255)
aTTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCgag > 2:3054716/1‑93 (MQ=255)
ttCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCgaga > 2:4709215/1‑93 (MQ=255)
ttCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCgaga < 2:2721424/93‑1 (MQ=255)
ttCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCgaga > 1:5334041/1‑93 (MQ=255)
ttCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAACAACTACCGCAAGAACTGAACGATGCTAAGCGTCGCgaga > 1:1054743/1‑93 (MQ=255)
tCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGaa < 2:4449613/93‑1 (MQ=255)
|
CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAA > NC_000913/3291163‑3291342
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAAC > NC_000913/3291162‑3291345
|
GCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGC > SRR4302534.2210905/1‑94 (MQ=60)
CACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCA > SRR4302534.1763623/1‑94 (MQ=60)
CGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACT < SRR4302534.5887144/94‑1 (MQ=60)
CGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACT > SRR4302534.3249192/1‑94 (MQ=60)
GGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTG > SRR4302534.2734834/1‑94 (MQ=60)
GCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGG < SRR4302534.4520395/94‑1 (MQ=60)
GCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTG > SRR4302534.5194374/1‑94 (MQ=60)
GCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTG < SRR4302534.1496972/94‑1 (MQ=60)
AGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCCCTGGTGAA > SRR4302534.1149529/1‑94 (MQ=60)
AGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAA > SRR4302534.3435379/1‑94 (MQ=60)
AGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAA > SRR4302534.1961043/1‑94 (MQ=60)
AGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAA > SRR4302534.3736494/1‑94 (MQ=60)
GGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAA > SRR4302534.4033838/1‑94 (MQ=60)
GCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAG < SRR4302534.3408683/94‑1 (MQ=60)
CTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGA < SRR4302534.1865049/94‑1 (MQ=60)
TGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAA < SRR4302534.5134458/94‑1 (MQ=60)
TGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAA < SRR4302534.3966063/94‑1 (MQ=60)
ATTCTTCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGG < SRR4302534.2651716/94‑1 (MQ=60)
TTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGT < SRR4302534.210472/94‑1 (MQ=60)
TTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGT > SRR4302534.5617397/1‑94 (MQ=60)
TCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTA < SRR4302534.5187190/94‑1 (MQ=60)
TCTGCCTTTTATCTACAGCAGATGCAGCAAAGCTCTGATGTTACCAGGATCAACTTGCAATTACTCGCTATTCGCGCACTGGTGAAAGAAGGAA > SRR4302534.6646568/1‑94 (MQ=60)
CTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAA > SRR4302534.3768710/1‑94 (MQ=60)
GCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAA < SRR4302534.1229067/94‑1 (MQ=60)
GCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAA > SRR4302534.6652013/1‑94 (MQ=60)
CTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACC > SRR4302534.5495843/1‑94 (MQ=60)
CTGTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACC < SRR4302534.2177435/94‑1 (MQ=60)
TTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCG < SRR4302534.328060/94‑1 (MQ=60)
TTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCG < SRR4302534.5954160/94‑1 (MQ=60)
TTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGG > SRR4302534.213398/1‑94 (MQ=60)
TTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGG < SRR4302534.5251962/94‑1 (MQ=60)
TTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGG > SRR4302534.445375/1‑94 (MQ=60)
TTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGG > SRR4302534.6398244/1‑94 (MQ=60)
TATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGC < SRR4302534.1603464/94‑1 (MQ=60)
ATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCA > SRR4302534.4105325/1‑94 (MQ=60)
CTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGG < SRR4302534.3202212/94‑1 (MQ=60)
CTTCAGCAGAGGCAGCAAAGCTCTGATGATACCAGGATCAACTCGCAATTACTCGCAATTCGCGCATTGGTGAAAGAAGGTAAAACCGGGCAGG < SRR4302534.2651562/94‑1 (MQ=60)
TTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGC > SRR4302534.1102930/1‑94 (MQ=60)
TTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGC < SRR4302534.3961313/94‑1 (MQ=60)
TTCAGCAGATGCAGCAAAGCGCTGATGATCCCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGC < SRR4302534.3835199/94‑1 (MQ=60)
TCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCG > SRR4302534.4422211/1‑94 (MQ=60)
TCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCG < SRR4302534.5814907/94‑1 (MQ=60)
TCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCG > SRR4302534.6123396/1‑94 (MQ=60)
TCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCG < SRR4302534.6593991/94‑1 (MQ=60)
AGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGT < SRR4302534.2546960/94‑1 (MQ=60)
GCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTT < SRR4302534.4124367/94‑1 (MQ=60)
AGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGA > SRR4302534.111530/1‑94 (MQ=60)
TGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTT < SRR4302534.5628768/94‑1 (MQ=60)
GCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTG < SRR4302534.5894992/94‑1 (MQ=60)
CAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGT < SRR4302534.4632059/94‑1 (MQ=60)
CAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGT < SRR4302534.1096366/94‑1 (MQ=60)
AGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTT < SRR4302534.4914799/94‑1 (MQ=60)
AGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTT > SRR4302534.4940201/1‑94 (MQ=60)
AAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAA > SRR4302534.3457977/1‑94 (MQ=60)
AAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAA > SRR4302534.2509932/1‑94 (MQ=60)
AAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAA > SRR4302534.1062533/1‑94 (MQ=60)
AAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAC > SRR4302534.5020102/1‑94 (MQ=60)
AGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACC > SRR4302534.1038975/1‑94 (MQ=60)
AGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACC > SRR4302534.174748/1‑94 (MQ=60)
CTCTGATGATACCAGGATCAACTGGCAATTGCTCGCCATTCGCGCACTGGTGAAAGAAAGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAA < SRR4302534.3378844/94‑1 (MQ=60)
CTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAA < SRR4302534.5102288/94‑1 (MQ=60)
TCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAAC > SRR4302534.3626918/1‑94 (MQ=60)
CTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACT > SRR4302534.6162297/1‑94 (MQ=60)
CTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACT < SRR4302534.630909/94‑1 (MQ=60)
CTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACT < SRR4302534.6555083/94‑1 (MQ=60)
TGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTA < SRR4302534.3221536/94‑1 (MQ=60)
GATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTAC > SRR4302534.4110373/1‑94 (MQ=60)
GATGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTAC < SRR4302534.2138772/94‑1 (MQ=60)
TGATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCG < SRR4302534.6366006/94‑1 (MQ=60)
GATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGC < SRR4302534.1998535/94‑1 (MQ=60)
ATACCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCA > SRR4302534.2346745/1‑94 (MQ=60)
CCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGA > SRR4302534.6118537/1‑94 (MQ=60)
CCAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGA < SRR4302534.6005260/94‑1 (MQ=60)
CAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAA > SRR4302534.6512394/1‑94 (MQ=60)
CAGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAA > SRR4302534.2688305/1‑94 (MQ=60)
AGGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAAC > SRR4302534.5715395/1‑94 (MQ=60)
GGATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACT > SRR4302534.4688064/1‑94 (MQ=60)
GATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACGGCAAGAACTA > SRR4302534.3345300/1‑94 (MQ=60)
ATCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGA > SRR4302534.5572163/1‑94 (MQ=60)
TCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAA > SRR4302534.2566956/1‑94 (MQ=60)
TCAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAA > SRR4302534.3154068/1‑94 (MQ=60)
CAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAAC > SRR4302534.934841/1‑94 (MQ=60)
CAACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAAC < SRR4302534.4060541/94‑1 (MQ=60)
ATCTGGCAATTCCTCGCAATACGCGCACTGGAGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACG < SRR4302534.5743781/94‑1 (MQ=60)
AACTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGGTGAGTTGTTTAACCAACTACCGCAAGAACTGAACG > SRR4302534.6101997/1‑94 (MQ=60)
CTGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGAT < SRR4302534.3507097/94‑1 (MQ=60)
TGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATG > SRR4302534.4735269/1‑94 (MQ=60)
TGGCAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATG > SRR4302534.1827875/1‑94 (MQ=60)
CAATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTC > SRR4302534.4475191/1‑94 (MQ=60)
AATTACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCA > SRR4302534.1690792/1‑94 (MQ=60)
ATTACTGGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAGCAAGTACCCCCAGAACTAAAGGATGCTCAG > SRR4302534.4756235/1‑94 (MQ=60)
TACTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCG < SRR4302534.3560939/94‑1 (MQ=60)
TCTCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGT < SRR4302534.5243507/94‑1 (MQ=60)
TCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCG < SRR4302534.86058/94‑1 (MQ=60)
TCGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCG < SRR4302534.1171103/94‑1 (MQ=60)
CGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGC > SRR4302534.6344057/1‑94 (MQ=60)
CGCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGC > SRR4302534.6107143/1‑94 (MQ=60)
GCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCG < SRR4302534.5696739/94‑1 (MQ=60)
GCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCG < SRR4302534.6118057/94‑1 (MQ=60)
GCCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCG < SRR4302534.574272/94‑1 (MQ=60)
CCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGA > SRR4302534.3722494/1‑94 (MQ=60)
CCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGA < SRR4302534.214196/94‑1 (MQ=60)
CCATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGA > SRR4302534.698655/1‑94 (MQ=60)
CATTCGCGCAGTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAG < SRR4302534.6354185/94‑1 (MQ=60)
CATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAG < SRR4302534.6354184/94‑1 (MQ=60)
CATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAG > SRR4302534.5401314/1‑94 (MQ=60)
ATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGA > SRR4302534.5477885/1‑94 (MQ=60)
ATTCGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAAACAACTACCGCAAGAACTGAACGATGCTAAGCGTCGCGAGA > SRR4302534.1082048/1‑94 (MQ=60)
TCGCGCACTGGTGAAAGAAGGTAAAGCCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAA < SRR4302534.1381717/94‑1 (MQ=60)
CGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAA < SRR4302534.3060396/94‑1 (MQ=60)
CGCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGCTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAA > SRR4302534.6558107/1‑94 (MQ=60)
GCGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAAC > SRR4302534.6503498/1‑94 (MQ=60)
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GCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAAC > NC_000913/3291162‑3291345
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
