Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,446,406 G→A T134M (ACG→ATG)  rplP ← 50S ribosomal subunit protein L16

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,446,4060GA99.5% 1418.1 / ‑5.6 400T134M (ACG→ATG) rplP50S ribosomal subunit protein L16
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base A (172/226);  total (173/227)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.20e-01

Only 100 of 409 total aligned reads displayed.

GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCA  >  NC_000913/3446316‑3446498
                                                                                          |                                                                                            
 ttGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCt                                                                                           <  1:323764/93‑1 (MQ=255)
 gtGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCt                                                                                           <  2:7628684/92‑1 (MQ=255)
  tGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCtt                                                                                          >  2:3451500/1‑93 (MQ=255)
  tGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCtt                                                                                          <  1:8279101/93‑1 (MQ=255)
   gAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTa                                                                                         <  1:1040890/93‑1 (MQ=255)
    aaCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAg                                                                                        <  2:5107965/93‑1 (MQ=255)
     aCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGt                                                                                       <  1:4120666/93‑1 (MQ=255)
     aCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGt                                                                                       <  1:3653347/93‑1 (MQ=255)
       tGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTa                                                                                     <  1:1377153/93‑1 (MQ=255)
        gCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAc                                                                                    <  1:6008019/93‑1 (MQ=255)
        gCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAc                                                                                    <  2:4743978/93‑1 (MQ=255)
        gCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAc                                                                                    <  2:222283/93‑1 (MQ=255)
        gCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAc                                                                                    >  1:4812274/1‑93 (MQ=255)
          tCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACaa                                                                                  >  1:6432567/1‑93 (MQ=255)
           cACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACaaa                                                                                 <  1:3952316/93‑1 (MQ=255)
             cGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAgg                                                                               >  1:7378669/1‑93 (MQ=255)
             cGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAgg                                                                               <  1:3710096/93‑1 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                              <  1:3517983/93‑1 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                              <  2:2829498/93‑1 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                              <  1:7954560/93‑1 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                              >  2:7959096/1‑93 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                              >  2:4585295/1‑93 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggg                                                                              >  2:2569126/1‑92 (MQ=255)
               cagcagGTTAAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTAGCTTTCATTACATCACCATCTTAGTTACAAAggtg                                                                             <  2:4406841/93‑1 (MQ=255)
                agcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtgg                                                                            <  1:5239419/93‑1 (MQ=255)
                agcagGGTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtgg                                                                            >  2:8019773/1‑93 (MQ=255)
                 gcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtggt                                                                           >  1:4525129/1‑93 (MQ=255)
                 gcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtggt                                                                           >  2:1896658/1‑93 (MQ=255)
                 gcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtggt                                                                           <  2:7433869/93‑1 (MQ=255)
                  cagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGtt                                                                          <  2:1373175/93‑1 (MQ=255)
                  cagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGtt                                                                          >  1:498229/1‑93 (MQ=255)
                   agGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGttt                                                                         >  1:6300499/1‑93 (MQ=255)
                    ggTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGtttt                                                                        <  2:6627182/93‑1 (MQ=255)
                    ggTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGtttt                                                                        >  2:1969721/1‑93 (MQ=255)
                     gTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTa                                                                       >  1:12099/1‑93 (MQ=255)
                      ttCAGCATCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTaa                                                                      <  2:895182/93‑1 (MQ=255)
                      ttCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTaa                                                                      <  2:31508/93‑1 (MQ=255)
                      ttCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTaa                                                                      <  1:8799300/93‑1 (MQ=255)
                       tCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAAt                                                                     <  1:3404800/93‑1 (MQ=255)
                        tagcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATc                                                                    <  1:3003156/92‑1 (MQ=255)
                        cagcagCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATc                                                                    <  2:359224/93‑1 (MQ=255)
                        cagcagCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATc                                                                    <  1:2232335/93‑1 (MQ=255)
                         agcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCg                                                                   <  2:3814177/93‑1 (MQ=255)
                         agcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCg                                                                   <  2:6913081/93‑1 (MQ=255)
                         agcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCg                                                                   >  1:2132705/1‑93 (MQ=255)
                          gcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATGACCATCTTAGTTACAAAGGTGGTTTTAATCgc                                                                  >  2:1625177/1‑92 (MQ=255)
                               tCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGtt                                                             >  1:613427/1‑93 (MQ=255)
                                cGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGttt                                                            <  2:5893187/93‑1 (MQ=255)
                                cGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGttt                                                            <  2:1170166/93‑1 (MQ=255)
                                  gtgtTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGtttgc                                                          >  2:7574988/1‑91 (MQ=255)
                                    gtTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgct                                                        <  2:4185301/93‑1 (MQ=255)
                                     ttCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctg                                                       >  1:623338/1‑93 (MQ=255)
                                      tCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctgc                                                      <  2:2373723/93‑1 (MQ=255)
                                       cAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctgct                                                     <  1:851001/93‑1 (MQ=255)
                                        aGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGctgctg                                                    >  2:8633893/1‑93 (MQ=255)
                                           tctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCa                                                 <  2:8297097/93‑1 (MQ=255)
                                           tctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCa                                                 >  1:8159044/1‑93 (MQ=255)
                                           tctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCa                                                 >  2:5790975/1‑93 (MQ=255)
                                            ctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAg                                                >  2:5559247/1‑93 (MQ=255)
                                             ttCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGc                                               >  1:6540115/1‑93 (MQ=255)
                                               cAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCtt                                             <  2:3721066/93‑1 (MQ=255)
                                                 aCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACACAGGTGGTTTGAATCGGCAGTTTCGCTGCTGCCAGCTTGa                                           >  1:6672382/1‑93 (MQ=255)
                                                   gCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAAt                                         <  2:5956019/93‑1 (MQ=255)
                                                     tcttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGc                                       <  1:5806747/93‑1 (MQ=255)
                                                      cttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCt                                      <  2:1017419/93‑1 (MQ=255)
                                                       ttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCtt                                     >  2:2454612/1‑93 (MQ=255)
                                                       ttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCtt                                     <  2:7013594/93‑1 (MQ=255)
                                                        tctcACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTc                                    >  2:6431346/1‑93 (MQ=255)
                                                        tctcACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTc                                    >  2:391763/1‑93 (MQ=255)
                                                           cACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACg                                 >  2:6255643/1‑93 (MQ=255)
                                                           cACGCAGCTCTTTTGCTTTCATT‑CATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACgg                                <  2:4868786/93‑1 (MQ=255)
                                                            aCGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACgg                                >  1:1932098/1‑93 (MQ=255)
                                                              gCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGc                              >  2:1235648/1‑93 (MQ=255)
                                                              gCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGc                              <  2:5511324/93‑1 (MQ=255)
                                                               cAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGcc                             <  2:113509/93‑1 (MQ=255)
                                                               cAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGcc                             <  1:7544986/93‑1 (MQ=255)
                                                               cAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGcc                             >  1:7201522/1‑93 (MQ=255)
                                                                aGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCa                            >  1:6053948/1‑93 (MQ=255)
                                                                aGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCa                            >  1:6757575/1‑93 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                           >  1:6975134/1‑93 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                           >  2:5703853/1‑93 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                           >  2:1723353/1‑93 (MQ=255)
                                                                   tctTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGct                         <  1:1120353/93‑1 (MQ=255)
                                                                   tctTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGct                         >  2:8138461/1‑93 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTCATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                       >  1:5493813/1‑93 (MQ=255)
                                                                      tttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCtt                      <  1:2730033/93‑1 (MQ=255)
                                                                      tttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCtt                      <  2:7264107/93‑1 (MQ=255)
                                                                       ttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTc                     <  1:2578971/93‑1 (MQ=255)
                                                                       ttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTc                     <  2:5175073/93‑1 (MQ=255)
                                                                        tGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTcc                    <  2:5284847/93‑1 (MQ=255)
                                                                           tttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGa                 >  2:8399689/1‑93 (MQ=255)
                                                                           tttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGa                 >  1:5558256/1‑93 (MQ=255)
                                                                             tCATTACATCACCATCTTAGTTACAAAGGTGGTTTTCATCGGCAGTTTCGCTGCTACCAGCTTGAATGCTTCCCGGCCCAGCTCTTCCGGAac               <  1:7157140/93‑1 (MQ=255)
                                                                                 tACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCg           >  2:404792/1‑93 (MQ=255)
                                                                                  aCATCACCATATTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGt          <  1:4472714/93‑1 (MQ=255)
                                                                                    aTCACCATCTTAGTTACAAAGGTTGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTcc        <  2:1569265/93‑1 (MQ=255)
                                                                                      cACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCAt      <  1:2470068/93‑1 (MQ=255)
                                                                                      cACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCAt      <  1:8677380/93‑1 (MQ=255)
                                                                                       aCCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCAtt     >  1:7597795/1‑93 (MQ=255)
                                                                                          gTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCa  >  1:1511542/1‑93 (MQ=255)
                                                                                          |                                                                                            
GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCA  >  NC_000913/3446316‑3446498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 213 total aligned reads displayed.
CAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  NC_000913/3446313‑3446499
                                                                                             |                                                                                             
cagggttgacctCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCG                                                                                               <  SRR4302541.2504323/82‑1 (MQ=60)
CAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCA                                                                                               >  SRR4302541.6414634/1‑94 (MQ=60)
 AGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCAT                                                                                              <  SRR4302541.2024303/94‑1 (MQ=60)
 AGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCAT                                                                                              <  SRR4302541.5683650/94‑1 (MQ=60)
   GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCT                                                                                            <  SRR4302541.2848037/94‑1 (MQ=60)
   GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCT                                                                                            >  SRR4302541.3337792/1‑94 (MQ=60)
   GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCT                                                                                            <  SRR4302541.5435194/94‑1 (MQ=60)
    TTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTT                                                                                           <  SRR4302541.7986518/94‑1 (MQ=60)
    TTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTT                                                                                           <  SRR4302541.1331720/94‑1 (MQ=60)
    TTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTT                                                                                           <  SRR4302541.326655/94‑1 (MQ=60)
     TGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTA                                                                                          <  SRR4302541.8369171/94‑1 (MQ=60)
     TGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTA                                                                                          <  SRR4302541.633167/94‑1 (MQ=60)
     TGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTA                                                                                          >  SRR4302541.6346011/1‑94 (MQ=60)
      TAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAG                                                                                         <  SRR4302541.885911/94‑1 (MQ=60)
      GAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAG                                                                                         <  SRR4302541.1050535/94‑1 (MQ=60)
      GAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAG                                                                                         >  SRR4302541.4846408/1‑94 (MQ=60)
      GAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAG                                                                                         >  SRR4302541.2069978/1‑94 (MQ=60)
      GAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAG                                                                                         <  SRR4302541.1490582/94‑1 (MQ=60)
      GAACTGCTAACTCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAG                                                                                         <  SRR4302541.1050536/94‑1 (MQ=60)
       AACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGT                                                                                        <  SRR4302541.6809711/94‑1 (MQ=60)
        ACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTT                                                                                       <  SRR4302541.3690411/94‑1 (MQ=60)
        ACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTT                                                                                       >  SRR4302541.8499401/1‑94 (MQ=60)
          TGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAC                                                                                     >  SRR4302541.4861343/1‑94 (MQ=60)
          TGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAC                                                                                     <  SRR4302541.359844/94‑1 (MQ=60)
          TGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAC                                                                                     <  SRR4302541.1390692/94‑1 (MQ=60)
          TGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAC                                                                                     >  SRR4302541.7148690/1‑94 (MQ=60)
           GCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACA                                                                                    <  SRR4302541.6069575/94‑1 (MQ=60)
            CTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAA                                                                                   >  SRR4302541.6498132/1‑94 (MQ=60)
             TCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAA                                                                                  >  SRR4302541.3313098/1‑94 (MQ=60)
              CACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAG                                                                                 <  SRR4302541.6136025/94‑1 (MQ=60)
              CACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAG                                                                                 <  SRR4302541.3304033/94‑1 (MQ=60)
              CACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAG                                                                                 <  SRR4302541.3963819/94‑1 (MQ=60)
              CACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAG                                                                                 <  SRR4302541.8043087/94‑1 (MQ=60)
              CACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAG                                                                                 <  SRR4302541.3991613/94‑1 (MQ=60)
               ACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGG                                                                                >  SRR4302541.7457537/1‑94 (MQ=60)
                CGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGT                                                                               <  SRR4302541.3747538/94‑1 (MQ=60)
                CGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGT                                                                               <  SRR4302541.6503884/94‑1 (MQ=60)
                CGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGT                                                                               <  SRR4302541.4384783/94‑1 (MQ=60)
                 GCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTG                                                                              <  SRR4302541.5059324/94‑1 (MQ=60)
                 GCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTG                                                                              <  SRR4302541.8042218/94‑1 (MQ=60)
                  CAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             <  SRR4302541.8218514/94‑1 (MQ=60)
                  CAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             <  SRR4302541.3443220/94‑1 (MQ=60)
                  CAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             >  SRR4302541.8850984/1‑94 (MQ=60)
                  CAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             <  SRR4302541.670779/94‑1 (MQ=60)
                  CAGCAGGNTCAGCAGCTCGGTNTTCAGCTCTTCAACGCTCTTCTCACGCGGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             <  SRR4302541.5689087/94‑1 (MQ=60)
                   AGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGT                                                                            >  SRR4302541.4570799/1‑94 (MQ=60)
                   AGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGT                                                                            <  SRR4302541.5293394/94‑1 (MQ=60)
                   AGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGT                                                                            >  SRR4302541.7371876/1‑94 (MQ=60)
                    GCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTT                                                                           >  SRR4302541.502919/1‑94 (MQ=60)
                    GCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTT                                                                           <  SRR4302541.5363299/94‑1 (MQ=60)
                     CAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGGTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTT                                                                          >  SRR4302541.2189083/1‑94 (MQ=60)
                     CAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTT                                                                          <  SRR4302541.4899818/94‑1 (MQ=60)
                     CAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTT                                                                          >  SRR4302541.692584/1‑94 (MQ=60)
                     CAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTT                                                                          >  SRR4302541.6364897/1‑94 (MQ=60)
                     CAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTT                                                                          <  SRR4302541.108809/94‑1 (MQ=60)
                      AGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTT                                                                         >  SRR4302541.4112368/1‑94 (MQ=60)
                      AGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTT                                                                         <  SRR4302541.1180070/94‑1 (MQ=60)
                       GGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTA                                                                        >  SRR4302541.12180/1‑94 (MQ=60)
                       GGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCACCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTA                                                                        >  SRR4302541.2357765/1‑94 (MQ=60)
                        GTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAA                                                                       <  SRR4302541.7629646/94‑1 (MQ=60)
                         TTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAAT                                                                      <  SRR4302541.8893272/94‑1 (MQ=60)
                         TTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAAT                                                                      <  SRR4302541.2336576/94‑1 (MQ=60)
                          TCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATC                                                                     <  SRR4302541.3438775/94‑1 (MQ=60)
                          TCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATC                                                                     >  SRR4302541.5536283/1‑94 (MQ=60)
                           TAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    <  SRR4302541.3033475/94‑1 (MQ=60)
                           CAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    >  SRR4302541.2153329/1‑94 (MQ=60)
                           CAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    <  SRR4302541.2253957/94‑1 (MQ=60)
                           CAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    <  SRR4302541.3733157/94‑1 (MQ=60)
                           CAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    >  SRR4302541.1152974/1‑94 (MQ=60)
                           CAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    <  SRR4302541.8646697/94‑1 (MQ=60)
                           CAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    <  SRR4302541.4142194/94‑1 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   >  SRR4302541.8494373/1‑94 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   >  SRR4302541.4208223/1‑94 (MQ=60)
                             GCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGC                                                                  <  SRR4302541.5577103/94‑1 (MQ=60)
                             ACAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGC                                                                  <  SRR4302541.5577104/94‑1 (MQ=60)
                              CAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCA                                                                 <  SRR4302541.2542189/94‑1 (MQ=60)
                              CAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCA                                                                 <  SRR4302541.1635670/94‑1 (MQ=60)
                               AGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAG                                                                >  SRR4302541.7552150/1‑94 (MQ=60)
                               AGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAG                                                                <  SRR4302541.6581738/94‑1 (MQ=60)
                                GCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGT                                                               <  SRR4302541.6746585/94‑1 (MQ=60)
                                GCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGT                                                               <  SRR4302541.6342655/94‑1 (MQ=60)
                                 CTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTT                                                              <  SRR4302541.2051058/94‑1 (MQ=60)
                                 CTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTT                                                              >  SRR4302541.619181/1‑94 (MQ=60)
                                 CTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTT                                                              <  SRR4302541.5943112/94‑1 (MQ=60)
                                 CTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTT                                                              >  SRR4302541.4041047/1‑94 (MQ=60)
                                 CTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTT                                                              >  SRR4302541.8744664/1‑94 (MQ=60)
                                  TCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTT                                                             <  SRR4302541.7828682/94‑1 (MQ=60)
                                  TCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTT                                                             <  SRR4302541.5928749/94‑1 (MQ=60)
                                   CGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTC                                                            >  SRR4302541.8727073/1‑94 (MQ=60)
                                    GGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCG                                                           <  SRR4302541.6906598/94‑1 (MQ=60)
                                     GTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGC                                                          >  SRR4302541.6176840/1‑94 (MQ=60)
                                      TGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCT                                                         >  SRR4302541.6718927/1‑94 (MQ=60)
                                      TGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCT                                                         <  SRR4302541.3575721/94‑1 (MQ=60)
                                      TGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCT                                                         <  SRR4302541.4709602/94‑1 (MQ=60)
                                       GTTCAGCTCTTCAACGCTCTTCTCACGCCGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTACTCGGCAGTCTCGATG                                                        >  SRR4302541.629190/1‑94 (MQ=60)
                                       GTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTG                                                        >  SRR4302541.3458774/1‑94 (MQ=60)
                                       GTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTG                                                        >  SRR4302541.629191/1‑94 (MQ=60)
                                       GATCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATAACATCACCATCTAAGTTAGAAAGGTGGTTTTAATCGGCAGTTTCGCTG                                                        <  SRR4302541.1168761/94‑1 (MQ=60)
                                        TTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGC                                                       >  SRR4302541.8904624/1‑94 (MQ=60)
                                         TCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCT                                                      <  SRR4302541.3760300/94‑1 (MQ=60)
                                         TCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCT                                                      <  SRR4302541.3006744/94‑1 (MQ=60)
                                          CAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTG                                                     >  SRR4302541.1940718/1‑94 (MQ=60)
                                          CAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTG                                                     <  SRR4302541.7708225/94‑1 (MQ=60)
                                          CAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTG                                                     <  SRR4302541.858741/94‑1 (MQ=60)
                                           AGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGC                                                    >  SRR4302541.607586/1‑94 (MQ=60)
                                           AGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGC                                                    >  SRR4302541.8337246/1‑94 (MQ=60)
                                             CTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCA                                                  >  SRR4302541.8248196/1‑94 (MQ=60)
                                             CTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCA                                                  >  SRR4302541.2670959/1‑94 (MQ=60)
                                              TCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAG                                                 >  SRR4302541.4546204/1‑94 (MQ=60)
                                              TCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAG                                                 <  SRR4302541.2562586/94‑1 (MQ=60)
                                              TCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAG                                                 >  SRR4302541.3192061/1‑94 (MQ=60)
                                               CTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGC                                                <  SRR4302541.8558254/94‑1 (MQ=60)
                                               CTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGC                                                >  SRR4302541.6606902/1‑94 (MQ=60)
                                               CTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGGGGTTTTAATCGGCAGTTTTGCTGCTGCCAGC                                                >  SRR4302541.4338156/1‑94 (MQ=60)
                                                   AACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACACAGGTGGTTTGAATCGGCAGTTTCGCTGCTGCCAGCTTGA                                            >  SRR4302541.6741073/1‑94 (MQ=60)
                                                     CGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAAT                                          <  SRR4302541.3098359/94‑1 (MQ=60)
                                                      GCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATG                                         <  SRR4302541.6077289/94‑1 (MQ=60)
                                                      GCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATG                                         <  SRR4302541.6077290/94‑1 (MQ=60)
                                                      GCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATG                                         >  SRR4302541.4917869/1‑94 (MQ=60)
                                                      GCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGATTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATG                                         <  SRR4302541.5256470/94‑1 (MQ=60)
                                                        TCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCT                                       <  SRR4302541.5865748/94‑1 (MQ=60)
                                                        TCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCAGCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCT                                       <  SRR4302541.2172836/94‑1 (MQ=60)
                                                         CTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTT                                      <  SRR4302541.373855/94‑1 (MQ=60)
                                                         CTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTT                                      >  SRR4302541.1801236/1‑94 (MQ=60)
                                                         CTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTT                                      <  SRR4302541.7274798/94‑1 (MQ=60)
                                                         CTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGATGGGTTTAATCTGCACTTTCGCTGCTGCCAGCTTGAATGCTT                                      >  SRR4302541.5275522/1‑94 (MQ=60)
                                                          TTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGATGGCTTC                                     >  SRR4302541.4573657/1‑94 (MQ=60)
                                                          TTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTC                                     <  SRR4302541.7169219/94‑1 (MQ=60)
                                                           TCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCA                                    <  SRR4302541.3470359/94‑1 (MQ=60)
                                                           TCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCA                                    <  SRR4302541.7556109/94‑1 (MQ=60)
                                                            CTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCAC                                   >  SRR4302541.1104369/1‑94 (MQ=60)
                                                             TCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACG                                  <  SRR4302541.1295535/94‑1 (MQ=60)
                                                              CACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGG                                 >  SRR4302541.1950704/1‑94 (MQ=60)
                                                              CACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGG                                 <  SRR4302541.1415846/94‑1 (MQ=60)
                                                               ACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGG                                <  SRR4302541.6621620/94‑1 (MQ=60)
                                                                 GCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCC                              >  SRR4302541.7278358/1‑94 (MQ=60)
                                                                  CAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCA                             <  SRR4302541.7625626/94‑1 (MQ=60)
                                                                  CAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCA                             >  SRR4302541.6115830/1‑94 (MQ=60)
                                                                  CAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCA                             >  SRR4302541.6829843/1‑94 (MQ=60)
                                                                  CAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCA                             >  SRR4302541.3690269/1‑94 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGTCAG                            >  SRR4302541.6159944/1‑94 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            <  SRR4302541.3181171/94‑1 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            >  SRR4302541.7049468/1‑94 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            >  SRR4302541.72280/1‑94 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            <  SRR4302541.6460627/94‑1 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            >  SRR4302541.5695558/1‑94 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            <  SRR4302541.6388779/94‑1 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            <  SRR4302541.3870700/94‑1 (MQ=60)
                                                                    GCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGC                           >  SRR4302541.3137176/1‑94 (MQ=60)
                                                                     CTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTAGCTGCTGCCAGCTTGAATGCTTCACGGACCAGCT                          >  SRR4302541.195535/1‑94 (MQ=60)
                                                                      TCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTC                         <  SRR4302541.4534537/94‑1 (MQ=60)
                                                                      TCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTC                         >  SRR4302541.8314485/1‑94 (MQ=60)
                                                                      TCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTC                         <  SRR4302541.1130896/94‑1 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTCATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        >  SRR4302541.5550101/1‑94 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        <  SRR4302541.7656005/94‑1 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        >  SRR4302541.603596/1‑94 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        >  SRR4302541.8328014/1‑94 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        <  SRR4302541.2703821/94‑1 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        >  SRR4302541.7046458/1‑94 (MQ=60)
                                                                        TTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTT                       <  SRR4302541.3736053/94‑1 (MQ=60)
                                                                         TTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTC                      <  SRR4302541.2757359/94‑1 (MQ=60)
                                                                         TTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTC                      <  SRR4302541.2757360/94‑1 (MQ=60)
                                                                         TTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGATTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTC                      >  SRR4302541.5598072/1‑94 (MQ=60)
                                                                          TTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCC                     <  SRR4302541.2604832/94‑1 (MQ=60)
                                                                          TTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCC                     <  SRR4302541.5234398/94‑1 (MQ=60)
                                                                           TGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCG                    <  SRR4302541.7383279/94‑1 (MQ=60)
                                                                           TGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCG                    >  SRR4302541.1234528/1‑94 (MQ=60)
                                                                            GCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGG                   <  SRR4302541.6567289/94‑1 (MQ=60)
                                                                            GCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGG                   >  SRR4302541.8906840/1‑94 (MQ=60)
                                                                             CTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGA                  >  SRR4302541.6794829/1‑94 (MQ=60)
                                                                             CTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGA                  >  SRR4302541.5615160/1‑94 (MQ=60)
                                                                              TTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAA                 >  SRR4302541.2542514/1‑94 (MQ=60)
                                                                                TCATTACATCACCATCTTAGTTACAAAGGTGGTTTTCATCGGCAGTTTCGCTGCTACCAGCTTGAATGCTTCCCGGCCCAGCTCTTCCGGAACA               <  SRR4302541.7233443/94‑1 (MQ=60)
                                                                                TCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACA               <  SRR4302541.7233444/94‑1 (MQ=60)
                                                                                  ATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACC             <  SRR4302541.6488814/94‑1 (MQ=60)
                                                                                  ATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACC             >  SRR4302541.2343351/1‑94 (MQ=60)
                                                                                     ACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTC          >  SRR4302541.4523410/1‑94 (MQ=60)
                                                                                     ACATCACCATATTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTC          <  SRR4302541.4517778/94‑1 (MQ=60)
                                                                                       ATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCA        >  SRR4302541.8859593/1‑94 (MQ=60)
                                                                                       ATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCA        >  SRR4302541.7426360/1‑94 (MQ=60)
                                                                                       ATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCA        <  SRR4302541.6246617/94‑1 (MQ=60)
                                                                                         CACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT      >  SRR4302541.818612/1‑94 (MQ=60)
                                                                                         CACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT      <  SRR4302541.8770231/94‑1 (MQ=60)
                                                                                         CACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT      <  SRR4302541.2494777/94‑1 (MQ=60)
                                                                                         CACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT      <  SRR4302541.7589235/94‑1 (MQ=60)
                                                                                         CACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT      >  SRR4302541.7678974/1‑94 (MQ=60)
                                                                                           CCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCCGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTC    >  SRR4302541.7547338/1‑94 (MQ=60)
                                                                                           CCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTC    >  SRR4302541.8422919/1‑94 (MQ=60)
                                                                                           CCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTC    >  SRR4302541.4265172/1‑94 (MQ=60)
                                                                                            CGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCA   >  SRR4302541.1526577/1‑94 (MQ=60)
                                                                                            CATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCA   <  SRR4302541.1416210/94‑1 (MQ=60)
                                                                                            CATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCA   <  SRR4302541.1416211/94‑1 (MQ=60)
                                                                                             CTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  <  SRR4302541.8146873/94‑1 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  SRR4302541.1883427/1‑94 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  <  SRR4302541.1863995/94‑1 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  SRR4302541.4371515/1‑94 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  SRR4302541.1801739/1‑94 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  SRR4302541.339045/1‑94 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  SRR4302541.5292569/1‑94 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACCGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  SRR4302541.7777559/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  NC_000913/3446313‑3446499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑