Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 884 257.2 12958910 96.9% 12557183 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,446,406 G→A T134M (ACG→ATG)  rplP ← 50S ribosomal subunit protein L16

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,446,4060GA100.0% 1134.5 / NA 287T134M (ACG→ATG) rplP50S ribosomal subunit protein L16
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (132/155);  total (132/155)

Only 100 of 292 total aligned reads displayed.

GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT  >  NC_000913/3446316‑3446495
                                                                                          |                                                                                         
gTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATc                                                                                         >  2:5865115/1‑93 (MQ=255)
gTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATc                                                                                         <  2:5166770/93‑1 (MQ=255)
    aaCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAg                                                                                     <  1:4734681/93‑1 (MQ=255)
    aaCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAg                                                                                     >  2:5321185/1‑93 (MQ=255)
    aaCTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAg                                                                                     >  2:3429578/1‑93 (MQ=255)
        gCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAc                                                                                 <  2:4935794/93‑1 (MQ=255)
        gCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTAc                                                                                 <  2:1379821/93‑1 (MQ=255)
          tCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACaa                                                                               <  1:1597598/93‑1 (MQ=255)
           cACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACaaa                                                                              <  1:2616937/93‑1 (MQ=255)
            aCGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAg                                                                             <  1:3459282/93‑1 (MQ=255)
             cGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAgg                                                                            <  2:5906928/93‑1 (MQ=255)
             cGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAgg                                                                            <  2:3747477/93‑1 (MQ=255)
             cGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAgg                                                                            <  1:5994244/93‑1 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                           <  2:844387/93‑1 (MQ=255)
              gcagcaGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggt                                                                           <  2:3091217/93‑1 (MQ=255)
               cagcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtg                                                                          <  2:3168463/93‑1 (MQ=255)
               cagcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtg                                                                          >  1:2003188/1‑93 (MQ=255)
               cagcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtg                                                                          >  1:4799347/1‑93 (MQ=255)
                agcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtgg                                                                         >  1:4683840/1‑93 (MQ=255)
                agcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtgg                                                                         >  1:4288819/1‑93 (MQ=255)
                 gcagGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAggtggt                                                                        <  1:3666553/93‑1 (MQ=255)
                  cagGTTCAGCAGCTCGTTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGtt                                                                       <  2:3817857/93‑1 (MQ=255)
                   agGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGttt                                                                      >  2:2326129/1‑93 (MQ=255)
                    ggTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGtttt                                                                     >  1:2250639/1‑93 (MQ=255)
                     gTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTa                                                                    >  1:3169490/1‑93 (MQ=255)
                         agcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCg                                                                <  1:298030/93‑1 (MQ=255)
                         agcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCg                                                                >  2:110419/1‑93 (MQ=255)
                          gcagcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCgg                                                               >  2:4631034/1‑93 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             <  2:411975/93‑1 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             >  2:2183064/1‑93 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             <  2:5692753/93‑1 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             >  1:3497234/1‑93 (MQ=255)
                            agcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCa                                                             <  1:2300969/93‑1 (MQ=255)
                             gcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAg                                                            >  2:2653668/1‑93 (MQ=255)
                             gcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAg                                                            >  1:2345650/1‑93 (MQ=255)
                             gcTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAg                                                            >  1:2550817/1‑93 (MQ=255)
                              cTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGt                                                           <  1:4042135/93‑1 (MQ=255)
                              cTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGt                                                           <  1:1857959/93‑1 (MQ=255)
                              cTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGt                                                           <  1:2461056/93‑1 (MQ=255)
                                cGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGttt                                                         <  2:1560996/93‑1 (MQ=255)
                                cGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGttt                                                         <  2:4562884/93‑1 (MQ=255)
                                 ggTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTc                                                        <  1:3260563/93‑1 (MQ=255)
                                      tCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctgc                                                   <  1:6138926/93‑1 (MQ=255)
                                       cAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctgct                                                  >  2:5053705/1‑93 (MQ=255)
                                       cAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCgctgct                                                  <  2:521210/93‑1 (MQ=255)
                                        aGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGctgctg                                                 >  2:4727345/1‑93 (MQ=255)
                                         gCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCtgctgc                                                >  2:4481100/1‑93 (MQ=255)
                                          ctctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGcc                                               <  2:1875422/93‑1 (MQ=255)
                                           tctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCa                                              <  2:2003865/93‑1 (MQ=255)
                                            ctTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAg                                             >  2:4848156/1‑93 (MQ=255)
                                             ttCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGc                                            <  2:6367098/93‑1 (MQ=255)
                                              tCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCt                                           <  1:1432230/93‑1 (MQ=255)
                                               cAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCtt                                          <  1:980594/93‑1 (MQ=255)
                                               cAACGCTCTTCTCACGCAGATCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCtt                                          >  1:6240261/1‑93 (MQ=255)
                                                aaCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTg                                         >  1:291750/1‑93 (MQ=255)
                                                aaCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTg                                         >  1:4773761/1‑93 (MQ=255)
                                                aaCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTg                                         <  1:4584838/93‑1 (MQ=255)
                                                aaCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGCTACAAAGGCGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTg                                         >  2:2356427/1‑93 (MQ=255)
                                                 aCGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGa                                        >  1:3963361/1‑93 (MQ=255)
                                                   gCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAAt                                      <  1:529643/93‑1 (MQ=255)
                                                    ctctTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGAGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATg                                     >  2:245443/1‑93 (MQ=255)
                                                     tcttctCACGCAGCTCTTTTGCTGTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGc                                    <  1:1036924/93‑1 (MQ=255)
                                                      cttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCt                                   <  1:150896/93‑1 (MQ=255)
                                                       ttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCtt                                  >  2:3276594/1‑93 (MQ=255)
                                                       ttctCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCtt                                  <  2:5750744/93‑1 (MQ=255)
                                                          tcACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCAc                               <  2:6056195/93‑1 (MQ=255)
                                                            aCGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACgg                             >  2:5511377/1‑93 (MQ=255)
                                                              gCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGc                           <  1:1277234/93‑1 (MQ=255)
                                                               cAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGcc                          >  1:3305259/1‑93 (MQ=255)
                                                                aGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCa                         <  1:2091996/93‑1 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                        >  1:243146/1‑93 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                        >  2:424810/1‑93 (MQ=255)
                                                                 gCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAg                        >  2:6312574/1‑93 (MQ=255)
                                                                  ctctTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGc                       >  2:5717445/1‑93 (MQ=255)
                                                                   tctTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGct                      <  1:1005074/93‑1 (MQ=255)
                                                                    ctTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctc                     <  1:2838055/93‑1 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACCAAGGTGGGTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                    >  1:5765125/1‑93 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                    >  1:936568/1‑93 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                    <  1:951044/93‑1 (MQ=255)
                                                                     ttttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGctct                    >  1:4378457/1‑93 (MQ=255)
                                                                      tttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCtt                   <  2:3609922/93‑1 (MQ=255)
                                                                      tttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCtt                   >  1:5544471/1‑93 (MQ=255)
                                                                       ttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTc                  <  2:2510126/93‑1 (MQ=255)
                                                                       ttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTc                  <  1:4183166/93‑1 (MQ=255)
                                                                       ttGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTc                  <  2:1257595/93‑1 (MQ=255)
                                                                        tgttttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTcc                 <  1:1115945/90‑1 (MQ=255)
                                                                        tGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTcc                 <  1:5022558/93‑1 (MQ=255)
                                                                        tGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTcc                 <  2:397799/93‑1 (MQ=255)
                                                                           tttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGa              >  1:5426354/1‑93 (MQ=255)
                                                                           tttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGa              <  2:1636361/93‑1 (MQ=255)
                                                                            ttCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGaa             <  1:6342257/93‑1 (MQ=255)
                                                                             tCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGTCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAac            >  2:2878771/1‑93 (MQ=255)
                                                                              cATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAacc           >  2:3713360/1‑92 (MQ=255)
                                                                              cATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAaca           >  1:5678135/1‑93 (MQ=255)
                                                                               aTTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAacac          >  1:1176098/1‑93 (MQ=255)
                                                                                 tACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCg        <  2:3794669/93‑1 (MQ=255)
                                                                                   cATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTc      >  1:700263/1‑93 (MQ=255)
                                                                                    aTCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTcc     <  2:1730743/93‑1 (MQ=255)
                                                                                     tCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCa    >  1:3345325/1‑93 (MQ=255)
                                                                                     tCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCa    <  1:3844716/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATT  >  NC_000913/3446316‑3446495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  NC_000913/3446313‑3446499
                                                                                             |                                                                                             
CAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCA                                                                                               >  SRR4302534.2336556/1‑94 (MQ=60)
CAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCA                                                                                               >  SRR4302534.3221373/1‑94 (MQ=60)
CAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCA                                                                                               >  SRR4302534.4154877/1‑94 (MQ=60)
 AGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCAT                                                                                              >  SRR4302534.3448006/1‑94 (MQ=60)
   GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCT                                                                                            >  SRR4302534.3083297/1‑94 (MQ=60)
   GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCT                                                                                            <  SRR4302534.2327123/94‑1 (MQ=60)
   GTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCT                                                                                            <  SRR4302534.2967081/94‑1 (MQ=60)
     TGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTA                                                                                          >  SRR4302534.961444/1‑94 (MQ=60)
      GAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAG                                                                                         <  SRR4302534.3858227/94‑1 (MQ=60)
      GAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAG                                                                                         >  SRR4302534.6564046/1‑94 (MQ=60)
      GAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAC                                                                                         >  SRR4302534.33630/1‑94 (MQ=60)
       AACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGT                                                                                        <  SRR4302534.3287315/94‑1 (MQ=60)
       AACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGT                                                                                        <  SRR4302534.4863235/94‑1 (MQ=60)
       AACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGT                                                                                        >  SRR4302534.3837450/1‑94 (MQ=60)
        ACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCGACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTT                                                                                       <  SRR4302534.6549172/94‑1 (MQ=60)
         CTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTA                                                                                      >  SRR4302534.6308331/1‑94 (MQ=60)
            CTCACGCAGCAGGTGCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAA                                                                                   >  SRR4302534.6367137/1‑94 (MQ=60)
             TCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAA                                                                                  <  SRR4302534.1639344/94‑1 (MQ=60)
              CACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAG                                                                                 <  SRR4302534.2686197/94‑1 (MQ=60)
               ACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGG                                                                                <  SRR4302534.3552266/94‑1 (MQ=60)
               ACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGG                                                                                <  SRR4302534.3605002/94‑1 (MQ=60)
                CGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGT                                                                               >  SRR4302534.2569943/1‑94 (MQ=60)
                CGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGT                                                                               <  SRR4302534.6157076/94‑1 (MQ=60)
                CGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGT                                                                               <  SRR4302534.2276775/94‑1 (MQ=60)
                 GCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTG                                                                              >  SRR4302534.4390920/1‑94 (MQ=60)
                 GCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTG                                                                              >  SRR4302534.2055624/1‑94 (MQ=60)
                 GCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTG                                                                              <  SRR4302534.6110639/94‑1 (MQ=60)
                 GCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTG                                                                              <  SRR4302534.107401/94‑1 (MQ=60)
                 GCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTG                                                                              <  SRR4302534.2295905/94‑1 (MQ=60)
                 GCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTG                                                                              >  SRR4302534.4929666/1‑94 (MQ=60)
                  CAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             >  SRR4302534.4811003/1‑94 (MQ=60)
                  CAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             >  SRR4302534.4285739/1‑94 (MQ=60)
                  CAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             >  SRR4302534.4405017/1‑94 (MQ=60)
                  CAGCAGGTTCAGCAGCTCGGTGTTCAACTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGG                                                                             >  SRR4302534.4905028/1‑94 (MQ=60)
                   AGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGT                                                                            >  SRR4302534.4035685/1‑94 (MQ=60)
                   AGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGT                                                                            <  SRR4302534.2478947/94‑1 (MQ=60)
                   AGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGT                                                                            >  SRR4302534.4898533/1‑94 (MQ=60)
                    GCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTT                                                                           <  SRR4302534.2337011/94‑1 (MQ=60)
                    GCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTT                                                                           <  SRR4302534.3765096/94‑1 (MQ=60)
                    GCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTT                                                                           <  SRR4302534.2892405/94‑1 (MQ=60)
                    GCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTT                                                                           <  SRR4302534.4842558/94‑1 (MQ=60)
                    GCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTT                                                                           <  SRR4302534.628125/94‑1 (MQ=60)
                      AGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTT                                                                         >  SRR4302534.2310297/1‑94 (MQ=60)
                       GGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTA                                                                        <  SRR4302534.1646118/94‑1 (MQ=60)
                       GGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTA                                                                        >  SRR4302534.3253098/1‑94 (MQ=60)
                         TTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAAT                                                                      <  SRR4302534.4778508/94‑1 (MQ=60)
                          TCAGCAGCTCGGTGTTCAGCTCTTCAACGCTTTTCTCACGCAGCTCTTTTGCTGTCATTACATCACCATCTTACTTACAAAGGTGTTTTTAATC                                                                     >  SRR4302534.4544465/1‑94 (MQ=60)
                           CAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    <  SRR4302534.5698944/94‑1 (MQ=60)
                           CAGCAGCTCGGTGTTCAGCTCTTCAAAGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCG                                                                    >  SRR4302534.4124631/1‑94 (MQ=60)
                            CGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTGCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAAGCGG                                                                   <  SRR4302534.6032954/94‑1 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   >  SRR4302534.3434396/1‑94 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   <  SRR4302534.648576/94‑1 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   >  SRR4302534.3384484/1‑94 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   >  SRR4302534.6251023/1‑94 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   <  SRR4302534.305736/94‑1 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   <  SRR4302534.4816453/94‑1 (MQ=60)
                            AGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGG                                                                   <  SRR4302534.5472761/94‑1 (MQ=60)
                             GCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGC                                                                  <  SRR4302534.4084567/94‑1 (MQ=60)
                              CAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCA                                                                 >  SRR4302534.3591277/1‑94 (MQ=60)
                              CAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCA                                                                 >  SRR4302534.2646559/1‑94 (MQ=60)
                              CAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCA                                                                 <  SRR4302534.4214954/94‑1 (MQ=60)
                               AGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAG                                                                <  SRR4302534.2362040/94‑1 (MQ=60)
                               AGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAG                                                                >  SRR4302534.2407894/1‑94 (MQ=60)
                               AGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAG                                                                >  SRR4302534.2618446/1‑94 (MQ=60)
                               AGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAG                                                                >  SRR4302534.139797/1‑94 (MQ=60)
                               AGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAG                                                                >  SRR4302534.5419819/1‑94 (MQ=60)
                                 CTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTT                                                              <  SRR4302534.2526443/94‑1 (MQ=60)
                                 CTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTT                                                              <  SRR4302534.1906323/94‑1 (MQ=60)
                                 CTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTT                                                              <  SRR4302534.4150525/94‑1 (MQ=60)
                                  TCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTT                                                             <  SRR4302534.5730121/94‑1 (MQ=60)
                                   CGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTC                                                            <  SRR4302534.5917317/94‑1 (MQ=60)
                                   CGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTC                                                            >  SRR4302534.904979/1‑94 (MQ=60)
                                    GGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCG                                                           <  SRR4302534.1162470/94‑1 (MQ=60)
                                    GGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCG                                                           <  SRR4302534.3347385/94‑1 (MQ=60)
                                    GGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCG                                                           <  SRR4302534.2730239/94‑1 (MQ=60)
                                    GGTGCTCAGCTCTTCAACGCTCTTCTCACTCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGGCGTCTTAATACGCAGTTTCG                                                           >  SRR4302534.5251138/1‑94 (MQ=60)
                                     GTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACACACGTGGATTTAATCGGCAGTTTCGC                                                          >  SRR4302534.5445938/1‑94 (MQ=60)
                                      TGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCT                                                         <  SRR4302534.2503213/94‑1 (MQ=60)
                                      TGTTCAGCTATTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGCGGTTTTAATCTGCAGTTTCGCT                                                         >  SRR4302534.6486873/1‑94 (MQ=60)
                                       GTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTG                                                        <  SRR4302534.1308485/94‑1 (MQ=60)
                                         TCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCT                                                      <  SRR4302534.6305900/94‑1 (MQ=60)
                                           AGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGC                                                    >  SRR4302534.2426236/1‑94 (MQ=60)
                                              ACTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAG                                                 >  SRR4302534.3410978/1‑94 (MQ=60)
                                               CTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGC                                                >  SRR4302534.303117/1‑94 (MQ=60)
                                                TTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCT                                               <  SRR4302534.355792/94‑1 (MQ=60)
                                                 TCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTT                                              <  SRR4302534.1469925/94‑1 (MQ=60)
                                                 TCAACGCTCTTCTCACGCAGATCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTT                                              >  SRR4302534.6409587/1‑94 (MQ=60)
                                                  CAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTTCTGCCAGCTTG                                             <  SRR4302534.4035201/94‑1 (MQ=60)
                                                  CAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTG                                             >  SRR4302534.4903377/1‑94 (MQ=60)
                                                  CAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTG                                             <  SRR4302534.1005616/94‑1 (MQ=60)
                                                  CAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTG                                             >  SRR4302534.299289/1‑94 (MQ=60)
                                                   AACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGA                                            >  SRR4302534.4069475/1‑94 (MQ=60)
                                                   AACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGA                                            <  SRR4302534.4709243/94‑1 (MQ=60)
                                                   AACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGA                                            >  SRR4302534.1919628/1‑94 (MQ=60)
                                                     CGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAAT                                          <  SRR4302534.977549/94‑1 (MQ=60)
                                                     CGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAAT                                          >  SRR4302534.4779676/1‑94 (MQ=60)
                                                     CGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAAT                                          <  SRR4302534.4404193/94‑1 (MQ=60)
                                                      GCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATG                                         <  SRR4302534.542792/94‑1 (MQ=60)
                                                      ACTCTTATCACGCAGCTCTTTTGCTATCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATG                                         <  SRR4302534.2842341/94‑1 (MQ=60)
                                                        TCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCT                                       <  SRR4302534.3680898/94‑1 (MQ=60)
                                                        TCTTCTCACGCAGCTCTTTTGCTGTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCT                                       <  SRR4302534.1063687/94‑1 (MQ=60)
                                                         CTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTT                                      <  SRR4302534.2580223/94‑1 (MQ=60)
                                                         CTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTT                                      >  SRR4302534.211459/1‑94 (MQ=60)
                                                         CTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTT                                      <  SRR4302534.154826/94‑1 (MQ=60)
                                                           TCTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCA                                    >  SRR4302534.3510246/1‑94 (MQ=60)
                                                            CTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCAC                                   >  SRR4302534.2142319/1‑94 (MQ=60)
                                                            CTCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCAC                                   <  SRR4302534.5031731/94‑1 (MQ=60)
                                                             TCACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACG                                  <  SRR4302534.4883742/94‑1 (MQ=60)
                                                              CACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGG                                 >  SRR4302534.1237267/1‑94 (MQ=60)
                                                              CACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGG                                 >  SRR4302534.1510804/1‑94 (MQ=60)
                                                              CACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGG                                 <  SRR4302534.1531795/94‑1 (MQ=60)
                                                              CACGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGG                                 >  SRR4302534.5591266/1‑94 (MQ=60)
                                                                CGCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGC                               >  SRR4302534.986310/1‑94 (MQ=60)
                                                                 GCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCC                              <  SRR4302534.1310848/94‑1 (MQ=60)
                                                                 GCAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCC                              >  SRR4302534.3393494/1‑94 (MQ=60)
                                                                  CAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCA                             <  SRR4302534.1326838/94‑1 (MQ=60)
                                                                  CAGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCA                             >  SRR4302534.1574009/1‑94 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            >  SRR4302534.177488/1‑94 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            <  SRR4302534.2146851/94‑1 (MQ=60)
                                                                   AGCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAG                            >  SRR4302534.249506/1‑94 (MQ=60)
                                                                    GCTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGC                           <  SRR4302534.5660114/94‑1 (MQ=60)
                                                                     CTCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCT                          <  SRR4302534.1135366/94‑1 (MQ=60)
                                                                     CTCTTTTCCTTTCATTACCTCACCATCTTAGTTACCAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCT                          <  SRR4302534.787530/94‑1 (MQ=60)
                                                                      TCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTTGCTGCTGCCAGCTTGAATGTTTCACGCGCCTGCTC                         >  SRR4302534.2036846/1‑94 (MQ=60)
                                                                      TCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTC                         <  SRR4302534.4526124/94‑1 (MQ=60)
                                                                      TCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTC                         <  SRR4302534.1030854/94‑1 (MQ=60)
                                                                      TCTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTC                         <  SRR4302534.5016615/94‑1 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACCAAGGTGGGTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        >  SRR4302534.5921522/1‑94 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        >  SRR4302534.960384/1‑94 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        >  SRR4302534.4496478/1‑94 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        <  SRR4302534.2912626/94‑1 (MQ=60)
                                                                       CTTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCT                        <  SRR4302534.5865142/94‑1 (MQ=60)
                                                                        TTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTT                       <  SRR4302534.975263/94‑1 (MQ=60)
                                                                        TTTTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTT                       >  SRR4302534.5694134/1‑94 (MQ=60)
                                                                          TTGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCC                     <  SRR4302534.4296217/94‑1 (MQ=60)
                                                                           TGTTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCG                    <  SRR4302534.1145081/94‑1 (MQ=60)
                                                                           TGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCG                    <  SRR4302534.5158239/94‑1 (MQ=60)
                                                                           TGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCG                    >  SRR4302534.3482732/1‑94 (MQ=60)
                                                                           TGCTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCG                    <  SRR4302534.2625490/94‑1 (MQ=60)
                                                                             CTTTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGA                  >  SRR4302534.5572398/1‑94 (MQ=60)
                                                                               TTNATNANNTNACCATCTTAGTTNNNNANNTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTNCCGGAAC                <  SRR4302534.2464083/94‑1 (MQ=60)
                                                                               TTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAAC                <  SRR4302534.4457921/94‑1 (MQ=60)
                                                                               TTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAAC                <  SRR4302534.6513547/94‑1 (MQ=60)
                                                                               TTCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAAC                <  SRR4302534.3248814/94‑1 (MQ=60)
                                                                                TCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACA               >  SRR4302534.5831867/1‑94 (MQ=60)
                                                                                TCATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACA               <  SRR4302534.240432/94‑1 (MQ=60)
                                                                                 CATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACAC              <  SRR4302534.4426260/94‑1 (MQ=60)
                                                                                 CATTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACAC              >  SRR4302534.1207008/1‑94 (MQ=60)
                                                                                   TTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCG            <  SRR4302534.2511596/94‑1 (MQ=60)
                                                                                   TTACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTCCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCG            <  SRR4302534.1034811/94‑1 (MQ=60)
                                                                                     ACATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTC          >  SRR4302534.717417/1‑94 (MQ=60)
                                                                                       ATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCA        >  SRR4302534.2988483/1‑94 (MQ=60)
                                                                                       ATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCA        >  SRR4302534.1614288/1‑94 (MQ=60)
                                                                                       ATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCA        >  SRR4302534.3434875/1‑94 (MQ=60)
                                                                                       ATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCA        <  SRR4302534.3338987/94‑1 (MQ=60)
                                                                                       ATCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCA        >  SRR4302534.1150400/1‑94 (MQ=60)
                                                                                        TCACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCAT       <  SRR4302534.3947973/94‑1 (MQ=60)
                                                                                          ACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTT     <  SRR4302534.3033798/94‑1 (MQ=60)
                                                                                          ACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTT     >  SRR4302534.6385418/1‑94 (MQ=60)
                                                                                          ACCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTT     >  SRR4302534.5400458/1‑94 (MQ=60)
                                                                                           CCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTC    <  SRR4302534.5313728/94‑1 (MQ=60)
                                                                                           CCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTC    >  SRR4302534.6595923/1‑94 (MQ=60)
                                                                                           CCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTC    >  SRR4302534.1374093/1‑94 (MQ=60)
                                                                                           CCATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTC    <  SRR4302534.282470/94‑1 (MQ=60)
                                                                                            CATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCA   >  SRR4302534.3967937/1‑94 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  <  SRR4302534.3521715/94‑1 (MQ=60)
                                                                                             ATCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  SRR4302534.475899/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAGGTTGAACTGCTCACGCAGCAGGTTCAGCAGCTCGGTGTTCAGCTCTTCAACGCTCTTCTCACGCAGCTCTTTTGCTTTCATTACATCACCGTCTTAGTTACAAAGGTGGTTTTAATCGGCAGTTTCGCTGCTGCCAGCTTGAATGCTTCACGGGCCAGCTCTTCCGGAACACCGTCCATTTCAT  >  NC_000913/3446313‑3446499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑