Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,455,292 |
T→C |
W427R (TGG→CGG) |
b3325 → |
YheF |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,455,292 | 0 | T | C | 99.6%
| 902.6
/ ‑5.0
| 265 | W427R (TGG→CGG) | b3325 | YheF |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (119/145); total (119/146) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.81e-01 |
Only 100 of 280 total aligned reads displayed.
AAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACTGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGC > NC_000913/3455203‑3455380
|
aaaaGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCggg < 1:4981068/93‑1 (MQ=255)
aaaGAAGTGTGGGATCACCCGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCgggg < 2:2838230/93‑1 (MQ=255)
aaGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCggggg > 1:5318728/1‑92 (MQ=255)
aaGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGa < 1:4129897/93‑1 (MQ=255)
aGAATGGTGGGATCACCAGCGCGTATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAg < 2:4738941/93‑1 (MQ=255)
aTGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTAc > 1:2341924/1‑93 (MQ=255)
aTGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTAc > 2:6855111/1‑93 (MQ=255)
tggtggGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACt > 1:1354915/1‑93 (MQ=255)
tggtggGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACt > 2:7915867/1‑93 (MQ=255)
tggtggGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACt > 2:3395041/1‑93 (MQ=255)
gtggGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGc < 1:3663452/93‑1 (MQ=255)
gtCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTAcc < 1:2970619/92‑1 (MQ=255)
aTCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTAcc > 1:6644915/1‑93 (MQ=255)
cACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACcgc < 1:8042539/93‑1 (MQ=255)
cACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACcgc > 1:7118177/1‑93 (MQ=255)
cACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACcgc > 2:7524852/1‑93 (MQ=255)
aCCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACcgcg > 2:8375701/1‑93 (MQ=255)
aCCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACcgcg > 1:4623745/1‑93 (MQ=255)
aCCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACcgcc > 1:574623/1‑92 (MQ=255)
ccAGCGCGGCTCCTTCCTGGGATATGTTTCGCGCCTGCAGTGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCgcgc < 1:6701708/93‑1 (MQ=255)
cAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCt < 2:8775659/93‑1 (MQ=255)
cAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCt < 1:5635960/93‑1 (MQ=255)
cgcgcGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTg < 1:2673659/92‑1 (MQ=255)
aGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTg > 1:8462534/1‑93 (MQ=255)
aGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTg > 2:5741149/1‑93 (MQ=255)
gcgcGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTgg < 2:3084481/93‑1 (MQ=255)
cgcgAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGc < 1:6572122/93‑1 (MQ=255)
cgAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCa > 2:4451362/1‑93 (MQ=255)
aaTCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGcccga > 1:2051397/1‑90 (MQ=255)
aaTCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGt > 1:4889190/1‑93 (MQ=255)
aaTCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGt > 1:4751513/1‑93 (MQ=255)
aTCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTa < 2:6951088/93‑1 (MQ=255)
aTCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTa < 1:3871428/93‑1 (MQ=255)
aTCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTa > 2:7581831/1‑93 (MQ=255)
cctgcctgGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGCCCGGGGAGTACTGCTTACCGCGCTGGCCAGTAAc < 1:8522873/93‑1 (MQ=255)
cctgcctgGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAAc > 2:6540868/1‑93 (MQ=255)
cctgcctgGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAAc < 2:2547752/93‑1 (MQ=255)
cctgcctgGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAAc > 1:7258128/1‑93 (MQ=255)
tgcctgGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACaa < 1:6733869/93‑1 (MQ=255)
tgcctgGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACaa < 2:5031079/93‑1 (MQ=255)
cctgGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATa < 2:6232970/93‑1 (MQ=255)
gggATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATaaaa < 2:1195321/93‑1 (MQ=255)
gggATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATaaaa < 2:5851173/93‑1 (MQ=255)
ggATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATaaaaa > 2:4603659/1‑93 (MQ=255)
ggATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATaaaaa < 1:8681588/93‑1 (MQ=255)
gATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAAt > 2:7043592/1‑93 (MQ=255)
gATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAAt > 1:5946790/1‑93 (MQ=255)
atatGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACTGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATg < 2:2857127/93‑1 (MQ=255)
atGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGAc < 2:6320825/93‑1 (MQ=255)
tGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAAtacca > 1:3479776/1‑89 (MQ=255)
tGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACa > 1:5455660/1‑93 (MQ=255)
tGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACa > 1:2787986/1‑93 (MQ=255)
gTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACAt > 2:7795968/1‑93 (MQ=255)
tttAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATc > 1:5093669/1‑93 (MQ=255)
tttAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATc < 2:329704/93‑1 (MQ=255)
ttAGCGTCTACAACGGCATGGCCGCAGGCTTCTTCAATGGCGCCCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATcc < 1:6975145/93‑1 (MQ=255)
ttAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATcc < 2:8104217/93‑1 (MQ=255)
tAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCt > 2:7487386/1‑93 (MQ=255)
tAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCt < 2:5951871/93‑1 (MQ=255)
aGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTc < 2:140883/93‑1 (MQ=255)
aGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTc < 2:8529173/93‑1 (MQ=255)
gcCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGcc > 1:6302546/1‑93 (MQ=255)
ccTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGcga > 2:531850/1‑91 (MQ=255)
ccTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCa < 2:2036914/93‑1 (MQ=255)
cTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCAc < 2:333166/93‑1 (MQ=255)
tACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCAcc > 1:3592748/1‑93 (MQ=255)
tACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCAcc > 1:8332269/1‑93 (MQ=255)
cAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCAcccc < 2:3970974/93‑1 (MQ=255)
aaTGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCa > 1:4474633/1‑93 (MQ=255)
atggcatggcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCaa > 2:7211782/1‑93 (MQ=255)
atggcatggcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCaa > 1:1864855/1‑93 (MQ=255)
atggcatggcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCaa < 2:1773424/93‑1 (MQ=255)
atggcatggcCGCAGGCTTCTTCAATGGAGACCGGGGAGTACTGCTTACCGAGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCaa > 2:5714216/1‑93 (MQ=255)
gcatggcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCa < 2:3516005/93‑1 (MQ=255)
gcatggcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCa > 2:4099913/1‑93 (MQ=255)
catggcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCAt > 2:1627187/1‑93 (MQ=255)
atggcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATc < 1:7508063/93‑1 (MQ=255)
atggcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATc < 2:8308516/93‑1 (MQ=255)
gcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCCAGCATCGTa > 2:3203088/1‑93 (MQ=255)
gcCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTa < 1:7218956/93‑1 (MQ=255)
ccGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTaa < 1:8516321/93‑1 (MQ=255)
cGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAAc < 1:3738491/93‑1 (MQ=255)
cGCAGGCTTCTTCAATGGCGACCGGGGAGATCTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAAc > 1:7687903/1‑93 (MQ=255)
gCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACg > 2:1920616/1‑93 (MQ=255)
cAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGc < 2:3726840/93‑1 (MQ=255)
cAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGc < 2:621375/93‑1 (MQ=255)
cAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGc > 1:1155924/1‑93 (MQ=255)
aGGCTTCTTCAATGGCGACCGGGGAGAACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTCACGCt > 1:3371612/1‑93 (MQ=255)
ggCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTg > 2:7548563/1‑93 (MQ=255)
ggCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTg > 1:7871380/1‑93 (MQ=255)
gCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTgg > 1:8246022/1‑93 (MQ=255)
ttcttcAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGat < 1:3118483/93‑1 (MQ=255)
tcttcAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGata < 1:4215822/93‑1 (MQ=255)
tcttcAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGata > 1:5827627/1‑93 (MQ=255)
tcttcAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGata > 1:6505619/1‑93 (MQ=255)
tcAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGataata > 1:4444465/1‑93 (MQ=255)
aaTGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATaaa > 1:5220760/1‑93 (MQ=255)
aTGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAAc < 1:1580556/93‑1 (MQ=255)
tGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACt < 2:8638929/93‑1 (MQ=255)
cGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTcgc < 1:2375556/93‑1 (MQ=255)
|
AAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACTGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGC > NC_000913/3455203‑3455380
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATAAAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACTGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGTCCT > NC_000913/3455199‑3455385
|
TATAAAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACC < SRR4302541.5842477/94‑1 (MQ=60)
TATAAAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACC < SRR4302541.5093310/94‑1 (MQ=60)
TAAAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGG < SRR4302541.1733864/94‑1 (MQ=60)
AAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGG < SRR4302541.5032154/94‑1 (MQ=60)
AAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGG > SRR4302541.5373476/1‑94 (MQ=60)
AAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAG < SRR4302541.4170700/94‑1 (MQ=60)
AATGGTGGGATCACCAGCGCGAATCCTGCCTGGTATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTAC < SRR4302541.8613429/94‑1 (MQ=60)
AATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTAC > SRR4302541.2364675/1‑94 (MQ=60)
ATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACT < SRR4302541.3526233/94‑1 (MQ=60)
ATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACT > SRR4302541.1368303/1‑94 (MQ=60)
GGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGT > SRR4302541.3058234/1‑94 (MQ=60)
GTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCT < SRR4302541.3700619/94‑1 (MQ=60)
GTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCT < SRR4302541.4207474/94‑1 (MQ=60)
GTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCT < SRR4302541.4548711/94‑1 (MQ=60)
TGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTT > SRR4302541.8901113/1‑94 (MQ=60)
TGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTT < SRR4302541.279815/94‑1 (MQ=60)
GTGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTA < SRR4302541.6789541/94‑1 (MQ=60)
GGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTA < SRR4302541.3484671/94‑1 (MQ=60)
GGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTA < SRR4302541.6789536/94‑1 (MQ=60)
GGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTA < SRR4302541.7058602/94‑1 (MQ=60)
GGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTA > SRR4302541.6111069/1‑94 (MQ=60)
GATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACC > SRR4302541.6713071/1‑94 (MQ=60)
GTCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCG < SRR4302541.3000554/94‑1 (MQ=60)
ATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGGGTACTGCTTACCG > SRR4302541.6427654/1‑94 (MQ=60)
ATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCG > SRR4302541.8354983/1‑94 (MQ=60)
TCCCCAGCGCGAATCCTGCCGGGGATATGTTTAGCGCCTACAATGGCAGGGCCGCAGGCTTCTTCAAGGGCGACCGGGGAGTACTGCTTACCGC < SRR4302541.4975727/94‑1 (MQ=60)
TCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGC > SRR4302541.7193993/1‑94 (MQ=60)
CACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCG < SRR4302541.8130980/94‑1 (MQ=60)
CACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCG > SRR4302541.4670761/1‑94 (MQ=60)
CACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCG > SRR4302541.365712/1‑94 (MQ=60)
CACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCC > SRR4302541.580032/1‑94 (MQ=60)
ACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGC > SRR4302541.5724755/1‑94 (MQ=60)
CCAGCGCGGCTCCTTCCTGGGATATGTTTCGCGCCTGCAGTGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCT < SRR4302541.6771970/94‑1 (MQ=60)
CCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCT < SRR4302541.1977788/94‑1 (MQ=60)
CCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCT > SRR4302541.3665548/1‑94 (MQ=60)
CAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTG < SRR4302541.5693584/94‑1 (MQ=60)
CAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTG > SRR4302541.8553821/1‑94 (MQ=60)
CAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAACGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTG < SRR4302541.6343132/94‑1 (MQ=60)
CGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGG < SRR4302541.2700222/94‑1 (MQ=60)
AGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGG < SRR4302541.781792/94‑1 (MQ=60)
CGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCC < SRR4302541.6639363/94‑1 (MQ=60)
GCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCA > SRR4302541.7553350/1‑94 (MQ=60)
CGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAG < SRR4302541.8148926/94‑1 (MQ=60)
GAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCcga > SRR4302541.2071196/1‑91 (MQ=60)
GAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGT > SRR4302541.4800058/1‑94 (MQ=60)
GAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGT > SRR4302541.4939074/1‑94 (MQ=60)
GAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGT < SRR4302541.7971210/94‑1 (MQ=60)
GAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGACGCAGGCTTCTTCAATGGCGACCGGGGCGTACTGCTTACCGCGCTGGacaga > SRR4302541.63765/1‑89 (MQ=60)
AATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTA < SRR4302541.7355863/94‑1 (MQ=60)
ATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAA < SRR4302541.3910356/94‑1 (MQ=60)
TCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAAC > SRR4302541.7335551/1‑94 (MQ=60)
CCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGCCCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACA < SRR4302541.8614590/94‑1 (MQ=60)
CCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACA > SRR4302541.399269/1‑94 (MQ=60)
CCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACA > SRR4302541.725421/1‑94 (MQ=60)
TGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAAT < SRR4302541.6805746/94‑1 (MQ=60)
TGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAAT < SRR4302541.5777036/94‑1 (MQ=60)
GCCTGGTATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTGCCGCGCTGGCCAGTAACAATA < SRR4302541.2224937/94‑1 (MQ=60)
GCTGGGATATTGTTAGGGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAA < SRR4302541.8557738/94‑1 (MQ=60)
CCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAA < SRR4302541.542836/94‑1 (MQ=60)
CCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAA > SRR4302541.6761571/1‑94 (MQ=60)
CTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAA > SRR4302541.2574639/1‑94 (MQ=60)
TGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAA > SRR4302541.8147763/1‑94 (MQ=60)
GGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAAT < SRR4302541.5688910/94‑1 (MQ=60)
GGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAAT < SRR4302541.8774481/94‑1 (MQ=60)
GGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAAT > SRR4302541.6007389/1‑94 (MQ=60)
GATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATG > SRR4302541.7325217/1‑94 (MQ=60)
ATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGA < SRR4302541.6602762/94‑1 (MQ=60)
TATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGAC < SRR4302541.7312723/94‑1 (MQ=60)
TATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGAC < SRR4302541.401679/94‑1 (MQ=60)
TATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGAC < SRR4302541.526170/94‑1 (MQ=60)
ATGTTTAGCGCCTACAATGGCATGGCCGCTGGCTCCTTCAATGGCGTCCGTAGAGTACGGCTTACCGTGCTGGCCGGTAACAATAAAAATGACA < SRR4302541.7230164/94‑1 (MQ=53)
ATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATacca > SRR4302541.3514592/1‑90 (MQ=60)
ATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACA > SRR4302541.3514587/1‑94 (MQ=60)
ATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACA > SRR4302541.5511627/1‑94 (MQ=60)
ATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACA > SRR4302541.3514593/1‑94 (MQ=60)
ATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACA > SRR4302541.2816114/1‑94 (MQ=60)
TGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACAT > SRR4302541.7788581/1‑94 (MQ=60)
TGTTTAGCGCCTACAATGGCATGGCCGCAGGCTGCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACAT < SRR4302541.8585853/94‑1 (MQ=60)
GTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCACTGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAACTGACATC > SRR4302541.5145978/1‑94 (MQ=60)
GTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATC > SRR4302541.2367988/1‑94 (MQ=60)
GTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATC > SRR4302541.5145980/1‑94 (MQ=60)
TTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCC < SRR4302541.5943603/94‑1 (MQ=60)
TTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCC > SRR4302541.6818104/1‑94 (MQ=60)
TTAGCGTCTACAACGGCATGGCCGCAGGCTTCTTCAATGGCGCCCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCT < SRR4302541.7049479/94‑1 (MQ=60)
TTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCT < SRR4302541.5923302/94‑1 (MQ=60)
TTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCT < SRR4302541.4511829/94‑1 (MQ=60)
TTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCT < SRR4302541.377345/94‑1 (MQ=60)
TAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTC > SRR4302541.5384689/1‑94 (MQ=60)
AGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCG < SRR4302541.8665076/94‑1 (MQ=60)
AGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCG < SRR4302541.2089570/94‑1 (MQ=60)
AGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCG < SRR4302541.8397390/94‑1 (MQ=60)
CGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCC > SRR4302541.6366973/1‑94 (MQ=60)
CGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCC < SRR4302541.474270/94‑1 (MQ=60)
GCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCA < SRR4302541.3771610/94‑1 (MQ=60)
GCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCA > SRR4302541.1670073/1‑94 (MQ=60)
CTACAATGGCATGGCCGCAGGCTTTTTCAATGGCGACCGGGGAGTTCTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCCCC < SRR4302541.7173231/94‑1 (MQ=60)
CTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGCCATCCTCCCCACC > SRR4302541.8422767/1‑94 (MQ=60)
CTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACC > SRR4302541.5047422/1‑94 (MQ=60)
CTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACC > SRR4302541.3629176/1‑94 (MQ=60)
CTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACC > SRR4302541.8422766/1‑94 (MQ=60)
ACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCC < SRR4302541.6700986/94‑1 (MQ=60)
CAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCA > SRR4302541.4519721/1‑94 (MQ=60)
CAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCA > SRR4302541.4320386/1‑94 (MQ=60)
CAATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCA > SRR4302541.2841044/1‑94 (MQ=60)
AATGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAA > SRR4302541.1882829/1‑94 (MQ=60)
TGGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGC < SRR4302541.847374/94‑1 (MQ=60)
GGCATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCGCCCCAAGCA < SRR4302541.1534347/94‑1 (MQ=60)
CATGGGCGGAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATC < SRR4302541.3038443/94‑1 (MQ=60)
ATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCG < SRR4302541.4701291/94‑1 (MQ=60)
ATGGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCG < SRR4302541.7588311/94‑1 (MQ=60)
GGCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTA < SRR4302541.5327269/94‑1 (MQ=60)
GCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAA < SRR4302541.8692005/94‑1 (MQ=60)
GCCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAA < SRR4302541.7295972/94‑1 (MQ=60)
CCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAAC < SRR4302541.8607987/94‑1 (MQ=60)
CCGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAAC < SRR4302541.7646422/94‑1 (MQ=60)
CCGCAGGCTTCTTCAATGGCGACCGGGGAGATCTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAAC > SRR4302541.7769652/1‑94 (MQ=60)
CGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACG > SRR4302541.6738028/1‑94 (MQ=60)
CGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACG < SRR4302541.3776120/94‑1 (MQ=60)
CGCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACG < SRR4302541.4976177/94‑1 (MQ=60)
GCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGC > SRR4302541.1166993/1‑94 (MQ=60)
GCAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGC > SRR4302541.1166992/1‑94 (MQ=60)
CAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCT > SRR4302541.5586583/1‑94 (MQ=60)
CAGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCT > SRR4302541.3763519/1‑94 (MQ=60)
CAGGCTTCTTCAATGGCGACCGGGGAGAACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTCACGCT > SRR4302541.3405232/1‑94 (MQ=60)
AGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTG > SRR4302541.7957867/1‑94 (MQ=60)
AGGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTG > SRR4302541.4219003/1‑94 (MQ=60)
GGCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGG > SRR4302541.8335853/1‑94 (MQ=60)
GCTTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGA < SRR4302541.3156526/94‑1 (MQ=60)
TTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATA < SRR4302541.3150035/94‑1 (MQ=60)
TTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATA > SRR4302541.5882847/1‑94 (MQ=60)
TTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATA > SRR4302541.5886886/1‑94 (MQ=60)
TTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATA > SRR4302541.6897741/1‑94 (MQ=60)
TTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATA > SRR4302541.6571980/1‑94 (MQ=60)
TTCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGCAACAATAAAAATGACATACTCGCCACCCCAAGCATCGTAACGCTGGATA > SRR4302541.1617374/1‑94 (MQ=60)
TCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAA < SRR4302541.2937094/94‑1 (MQ=60)
TCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAA > SRR4302541.2490519/1‑94 (MQ=60)
TCTTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAA < SRR4302541.4257770/94‑1 (MQ=60)
TTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATA < SRR4302541.6610910/94‑1 (MQ=60)
TTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATA > SRR4302541.4489150/1‑94 (MQ=60)
TTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATA > SRR4302541.4489153/1‑94 (MQ=60)
TTCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATA < SRR4302541.4489945/94‑1 (MQ=60)
TCAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAA < SRR4302541.5333999/94‑1 (MQ=60)
TCAATGGCGACCGGGGAGTACTACTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAA < SRR4302541.7697818/94‑1 (MQ=60)
CAATGGCGACTGGGGAGCACTGCTTACCGCGCTGGCCAGTAACGATAAAAATGACATACTCGCCACCCCACGCATCGTAACGCTGGATAATAAA < SRR4302541.1545773/94‑1 (MQ=60)
CAATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAA > SRR4302541.5274565/1‑94 (MQ=60)
AATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAAC > SRR4302541.4866698/1‑94 (MQ=60)
ATGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACT < SRR4302541.1596343/94‑1 (MQ=60)
TGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTC < SRR4302541.4805451/94‑1 (MQ=60)
TGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTC > SRR4302541.2792416/1‑94 (MQ=60)
TGGCGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTC < SRR4302541.1952802/94‑1 (MQ=60)
CGACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCG < SRR4302541.2398757/94‑1 (MQ=60)
GACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGT > SRR4302541.1535667/1‑94 (MQ=60)
GACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGT > SRR4302541.3566983/1‑94 (MQ=60)
ACCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGTC > SRR4302541.3800794/1‑94 (MQ=60)
CCGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGTCC < SRR4302541.7485272/94‑1 (MQ=60)
CGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGTCCT > SRR4302541.6611000/1‑94 (MQ=60)
CGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGTCCT > SRR4302541.7727529/1‑94 (MQ=60)
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TATAAAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACTGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGTCCT > NC_000913/3455199‑3455385
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
