Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,477,397	T→C	N283S (AAC→AGC)	kefB ←	KefB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,477,397	0	T	C	99.7%	1150.2 / ‑4.9	332	N283S (AAC→AGC)	kefB	KefB
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (146/185); total (146/186)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.58e-01

Only 100 of 340 total aligned reads displayed.

GCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCA  >  NC_000913/3477307‑3477486

gcCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTg                                                                                         >  1:374884/1‑93 (MQ=255)

gcCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTg                                                                                         <  2:3147244/93‑1 (MQ=255)

 ccAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGa                                                                                        >  2:8193758/1‑93 (MQ=255)

  cagcagATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAg                                                                                       >  1:1273392/1‑93 (MQ=255)

   agcagATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGt                                                                                      >  2:8098326/1‑93 (MQ=255)

    gcagATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAggg                                                                                     >  1:6430415/1‑91 (MQ=255)

     cagATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGa                                                                                    >  2:6679582/1‑93 (MQ=255)

       gATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACa                                                                                  >  1:481765/1‑93 (MQ=255)

       aaTACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACa                                                                                  <  2:6352018/92‑1 (MQ=255)

        aTACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACAt                                                                                 <  2:751094/93‑1 (MQ=255)

        aTACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACAt                                                                                 >  1:3020814/1‑93 (MQ=255)

          aCAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGc                                                                               >  2:6993902/1‑93 (MQ=255)

           cAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGcc                                                                              <  1:946912/93‑1 (MQ=255)

           cAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGcc                                                                              >  2:2815824/1‑93 (MQ=255)

           cAGCACGAGAATTTACACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGcc                                                                              >  1:8262217/1‑93 (MQ=255)

            aGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCg                                                                             >  2:2629332/1‑93 (MQ=255)

             gCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGa                                                                            <  2:4510089/93‑1 (MQ=255)

               aCGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACa                                                                          >  2:2196326/1‑93 (MQ=255)

                cGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACag                                                                         >  1:5697878/1‑93 (MQ=255)

                 gagaATTTTCACCGCCCCCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACaga                                                                        <  1:2579844/93‑1 (MQ=255)

                 gagaATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACaga                                                                        <  2:180988/93‑1 (MQ=255)

                 gagaATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACaga                                                                        <  1:8064854/93‑1 (MQ=255)

                 gagaATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACaga                                                                        >  1:7679589/1‑93 (MQ=255)

                   gaATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAgaga                                                                      <  1:611447/93‑1 (MQ=255)

                   gaATTTTCACCGCCACCAGCACAACCACGCGTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAgaga                                                                      <  1:1146726/93‑1 (MQ=255)

                    aaTTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGAt                                                                     <  1:4033742/93‑1 (MQ=255)

                     aTTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATa                                                                    <  2:6805548/93‑1 (MQ=255)

                     aTTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATa                                                                    >  1:545623/1‑93 (MQ=255)

                      ttttCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATaa                                                                   >  1:2802518/1‑93 (MQ=255)

                       tttCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATaaa                                                                  <  1:3095410/93‑1 (MQ=255)

                         tCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGa                                                                <  2:2925897/93‑1 (MQ=255)

                           cccGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGTTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAAc                                                              <  2:6143161/92‑1 (MQ=255)

                            ccGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACa                                                             <  1:6234969/93‑1 (MQ=255)

                             cGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACaa                                                            >  2:2300827/1‑93 (MQ=255)

                                 accaGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCg                                                        <  1:786245/93‑1 (MQ=255)

                                  ccaGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGa                                                       >  2:3642990/1‑93 (MQ=255)

                                  ccaGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGa                                                       <  2:1488629/93‑1 (MQ=255)

                                  ccaGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGa                                                       <  1:7984866/93‑1 (MQ=255)

                                    aGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGagc                                                     >  2:8739414/1‑93 (MQ=255)

                                     gCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCTagca                                                    <  2:5600334/93‑1 (MQ=255)

                                     gCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGagca                                                    >  2:4192142/1‑93 (MQ=255)

                                       acaACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGagcagc                                                  >  2:5718620/1‑93 (MQ=255)

                                        caACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAgcagca                                                 >  2:1987765/1‑93 (MQ=255)

                                         aaCCACGCTTATCTCTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCaa                                                <  1:5736733/93‑1 (MQ=255)

                                         aaCCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCaa                                                <  1:723126/93‑1 (MQ=255)

                                         aaCCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCaa                                                <  1:5254348/93‑1 (MQ=255)

                                          aCCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAg                                               >  1:7066251/1‑93 (MQ=255)

                                           ccACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGc                                              >  2:3133112/1‑93 (MQ=255)

                                           ccACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGc                                              >  2:2729012/1‑93 (MQ=255)

                                            cACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGcc                                             <  1:6591356/93‑1 (MQ=255)

                                              cGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCtt                                           >  2:7045916/1‑93 (MQ=255)

                                              cGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCtt                                           <  1:5584716/93‑1 (MQ=255)

                                              cGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCtt                                           <  1:7625446/93‑1 (MQ=255)

                                              cGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCtt                                           <  2:60269/93‑1 (MQ=255)

                                               gCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCttt                                          <  2:8242091/93‑1 (MQ=255)

                                               gCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCttt                                          <  1:1398891/93‑1 (MQ=255)

                                               gCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCttt                                          >  2:6642708/1‑93 (MQ=255)

                                                cTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTg                                         <  2:443690/93‑1 (MQ=255)

                                                  tATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGaa                                       <  1:3475956/93‑1 (MQ=255)

                                                    tCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAgg                                     <  2:1249/93‑1 (MQ=255)

                                                     cACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAggg                                    >  1:5013257/1‑93 (MQ=255)

                                                      aCTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGa                                   >  2:8517838/1‑93 (MQ=255)

                                                      aCTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGa                                   <  2:3458082/93‑1 (MQ=255)

                                                      aCTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGa                                   >  1:1499708/1‑93 (MQ=255)

                                                       cTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGAt                                  >  1:1874867/1‑93 (MQ=255)

                                                       cTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGAt                                  <  1:4377788/93‑1 (MQ=255)

                                                       cTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGAt                                  >  2:3245457/1‑93 (MQ=255)

                                                       cTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGAt                                  <  2:7382765/93‑1 (MQ=255)

                                                       cTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGAt                                  <  1:7495463/93‑1 (MQ=255)

                                                        tgcccACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATc                                 <  1:1717301/91‑1 (MQ=255)

                                                        tACCCACAACAGATGGGTATAAAGCGCCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATc                                 <  1:8608111/93‑1 (MQ=255)

                                                        tACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATc                                 <  1:2565712/93‑1 (MQ=255)

                                                        tACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATc                                 <  1:2752797/93‑1 (MQ=255)

                                                          cccACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGa                               >  1:5879083/1‑93 (MQ=255)

                                                           ccACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGAt                              >  1:5389811/1‑93 (MQ=255)

                                                              caacaGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGTAAGCCTTTGAAGGGATCGATAGc                           >  2:4753921/1‑93 (MQ=255)

                                                              caacaGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGc                           <  1:4715792/93‑1 (MQ=255)

                                                               aacaGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGcc                          >  2:1190760/1‑93 (MQ=255)

                                                                 caGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGt                        <  1:2221997/93‑1 (MQ=255)

                                                                 caGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGCGATCGATAGCCGt                        <  2:1608122/93‑1 (MQ=255)

                                                                  aGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGtt                       <  1:3571887/93‑1 (MQ=255)

                                                                  aGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGtt                       <  1:697142/93‑1 (MQ=255)

                                                                  aGATGAGTATAAAGCACCACGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGtt                       <  1:3299230/93‑1 (MQ=255)

                                                                     tGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTcc                    <  1:4415347/93‑1 (MQ=255)

                                                                      gggTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCa                   >  1:3841693/1‑93 (MQ=255)

                                                                       ggTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAg                  <  2:39276/93‑1 (MQ=255)

                                                                        gTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGt                 >  1:2041486/1‑93 (MQ=255)

                                                                        gTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGt                 <  1:1056079/93‑1 (MQ=255)

                                                                        gTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGt                 >  1:461852/1‑93 (MQ=255)

                                                                           taAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCa              <  2:5277148/93‑1 (MQ=255)

                                                                            aaaGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCAt             <  1:1621463/93‑1 (MQ=255)

                                                                             aaGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTTATg            >  2:4889819/1‑93 (MQ=255)

                                                                              aGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATgg           >  1:1967034/1‑93 (MQ=255)

                                                                               gCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGc          <  2:6874673/93‑1 (MQ=255)

                                                                                cACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCg         <  2:7658745/93‑1 (MQ=255)

                                                                                 aCCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGa        >  1:813990/1‑93 (MQ=255)

                                                                                    ccGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTTCAGTTCACGGCGatat     >  2:1825264/1‑93 (MQ=255)

                                                                                    ccGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGatat     <  1:7557563/93‑1 (MQ=255)

                                                                                     cGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATAtt    <  1:677243/93‑1 (MQ=255)

                                                                                      gAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTc   <  2:1047118/93‑1 (MQ=255)

GCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCA  >  NC_000913/3477307‑3477486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTT  >  NC_000913/3477305‑3477490

GCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCT                                                                                              <  SRR4302541.6885639/94‑1 (MQ=60)

 CGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTG                                                                                             >  SRR4302541.378331/1‑94 (MQ=60)

 CGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTG                                                                                             >  SRR4302541.4736147/1‑94 (MQ=60)

 CGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTG                                                                                             <  SRR4302541.4736387/94‑1 (MQ=60)

  GCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGA                                                                                            >  SRR4302541.6810851/1‑94 (MQ=60)

   CCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACTCACAACAGATGGGTATAAAGCACCCCGAGGCTGAG                                                                                           >  SRR4302541.3576445/1‑94 (MQ=60)

   CCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAG                                                                                           >  SRR4302541.6578060/1‑94 (MQ=60)

   CCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAG                                                                                           >  SRR4302541.1286049/1‑94 (MQ=60)

   CCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAG                                                                                           <  SRR4302541.914466/94‑1 (MQ=60)

    CAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGT                                                                                          <  SRR4302541.6235456/94‑1 (MQ=60)

     AGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTG                                                                                         <  SRR4302541.7966409/94‑1 (MQ=60)

     AGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTG                                                                                         >  SRR4302541.3573566/1‑94 (MQ=60)

     AGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTG                                                                                         >  SRR4302541.7212618/1‑94 (MQ=60)

     AGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGGG                                                                                         >  SRR4302541.6495966/1‑94 (MQ=60)

      GCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGA                                                                                        >  SRR4302541.1422466/1‑94 (MQ=60)

        AGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACA                                                                                      >  SRR4302541.486325/1‑94 (MQ=60)

         GATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACAT                                                                                     >  SRR4302541.3051320/1‑94 (MQ=60)

          ATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGGCATG                                                                                    <  SRR4302541.5655383/94‑1 (MQ=60)

          ATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATG                                                                                    >  SRR4302541.449507/1‑94 (MQ=60)

           TACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGC                                                                                   >  SRR4302541.2531306/1‑94 (MQ=60)

            ACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCC                                                                                  >  SRR4302541.8113845/1‑94 (MQ=60)

            ACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCC                                                                                  >  SRR4302541.3371748/1‑94 (MQ=60)

            ACAGCACGAGAATTTACACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCC                                                                                  >  SRR4302541.8352169/1‑94 (MQ=60)

             CAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCG                                                                                 <  SRR4302541.259909/94‑1 (MQ=60)

             CAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCG                                                                                 <  SRR4302541.955915/94‑1 (MQ=60)

             CAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCG                                                                                 <  SRR4302541.7626631/94‑1 (MQ=60)

              AGCACGAGAATTTTCACCGCCACGAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGGGACACGCCGA                                                                                >  SRR4302541.1549333/1‑94 (MQ=60)

                CACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACA                                                                              >  SRR4302541.5856051/1‑94 (MQ=60)

                 ACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAG                                                                             >  SRR4302541.5755981/1‑94 (MQ=60)

                  CGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGA                                                                            >  SRR4302541.7761229/1‑94 (MQ=60)

                   GAGAATTTTCACCGCCCCCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAG                                                                           <  SRR4302541.2605710/94‑1 (MQ=60)

                   GAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAG                                                                           <  SRR4302541.8153434/94‑1 (MQ=60)

                   GAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAG                                                                           <  SRR4302541.8083613/94‑1 (MQ=60)

                    AGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGA                                                                          >  SRR4302541.5336071/1‑94 (MQ=60)

                     GAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGAT                                                                         <  SRR4302541.617194/94‑1 (MQ=60)

                     GAATTTTCACCGCCACCAGCACAACCACGCGTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGAT                                                                         <  SRR4302541.1157650/94‑1 (MQ=60)

                      AATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGCTA                                                                        >  SRR4302541.550766/1‑94 (MQ=60)

                      AATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATA                                                                        >  SRR4302541.550768/1‑94 (MQ=60)

                      AATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATA                                                                        <  SRR4302541.4073582/94‑1 (MQ=60)

                       ATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAA                                                                       >  SRR4302541.2830859/1‑94 (MQ=60)

                        TTTTCTCCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAA                                                                      <  SRR4302541.4643276/94‑1 (MQ=60)

                         TTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAG                                                                     <  SRR4302541.3126797/94‑1 (MQ=60)

                           TCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAA                                                                   <  SRR4302541.220702/94‑1 (MQ=60)

                           TCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAA                                                                   <  SRR4302541.3222268/94‑1 (MQ=60)

                             ACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACA                                                                 <  SRR4302541.1470854/94‑1 (MQ=60)

                             ACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACA                                                                 <  SRR4302541.5803247/94‑1 (MQ=60)

                              CCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAA                                                                <  SRR4302541.4851212/94‑1 (MQ=60)

                              CCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAA                                                                <  SRR4302541.6298674/94‑1 (MQ=60)

                               CGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAA                                                               >  SRR4302541.5250111/1‑94 (MQ=60)

                               CGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAA                                                               >  SRR4302541.4630127/1‑94 (MQ=60)

                               CGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAA                                                               >  SRR4302541.2050172/1‑94 (MQ=60)

                               CGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAA                                                               >  SRR4302541.1964810/1‑94 (MQ=60)

                                 CCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACC                                                             >  SRR4302541.2675422/1‑94 (MQ=60)

                                 CCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACC                                                             <  SRR4302541.6110297/94‑1 (MQ=60)

                                 CCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACC                                                             >  SRR4302541.8239984/1‑94 (MQ=60)

                                  CACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCG                                                            <  SRR4302541.5751284/94‑1 (MQ=60)

                                  CACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCG                                                            <  SRR4302541.5751285/94‑1 (MQ=60)

                                  CACCAGCACAACCACGCTTATCACTACCAACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCG                                                            <  SRR4302541.7640957/94‑1 (MQ=60)

                                   ACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGA                                                           <  SRR4302541.793543/94‑1 (MQ=60)

                                   ACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACACCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGA                                                           >  SRR4302541.2750310/1‑94 (MQ=60)

                                    CCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCCCCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAG                                                          <  SRR4302541.2953919/94‑1 (MQ=60)

                                    CCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAG                                                          <  SRR4302541.1177249/94‑1 (MQ=60)

                                    CCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAG                                                          <  SRR4302541.8072805/94‑1 (MQ=60)

                                     CAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGC                                                         <  SRR4302541.2910217/94‑1 (MQ=60)

                                      AGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCA                                                        <  SRR4302541.644251/94‑1 (MQ=60)

                                      AGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCA                                                        >  SRR4302541.1729290/1‑94 (MQ=60)

                                       GCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAG                                                       <  SRR4302541.4014064/94‑1 (MQ=60)

                                        CACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGC                                                      <  SRR4302541.4954524/94‑1 (MQ=60)

                                        CACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGA                                                      >  SRR4302541.6891818/1‑94 (MQ=60)

                                         ACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCA                                                     >  SRR4302541.7621277/1‑94 (MQ=60)

                                         ACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCA                                                     <  SRR4302541.533997/94‑1 (MQ=60)

                                          CAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAA                                                    <  SRR4302541.3871766/94‑1 (MQ=60)

                                          CAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAA                                                    <  SRR4302541.7058902/94‑1 (MQ=60)

                                          CAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAA                                                    >  SRR4302541.3180878/1‑94 (MQ=60)

                                          CAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAA                                                    <  SRR4302541.4305256/94‑1 (MQ=60)

                                           AACCACGCTTATCTCTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAG                                                   <  SRR4302541.5795197/94‑1 (MQ=60)

                                           AACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAG                                                   <  SRR4302541.4423493/94‑1 (MQ=60)

                                           AACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAG                                                   <  SRR4302541.729964/94‑1 (MQ=60)

                                           AACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAG                                                   >  SRR4302541.7620417/1‑94 (MQ=60)

                                           AACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAG                                                   >  SRR4302541.4682240/1‑94 (MQ=60)

                                           AACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAG                                                   >  SRR4302541.7141400/1‑94 (MQ=60)

                                           AACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAG                                                   <  SRR4302541.5308499/94‑1 (MQ=60)

                                           AACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAG                                                   >  SRR4302541.8022131/1‑94 (MQ=60)

                                            ACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGC                                                  >  SRR4302541.5770647/1‑94 (MQ=60)

                                             CCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCC                                                 <  SRR4302541.1285651/94‑1 (MQ=60)

                                             CCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCC                                                 >  SRR4302541.7948295/1‑94 (MQ=60)

                                              CACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCT                                                <  SRR4302541.6658844/94‑1 (MQ=60)

                                              CACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCT                                                <  SRR4302541.1697719/94‑1 (MQ=60)

                                              CACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCT                                                <  SRR4302541.5757915/94‑1 (MQ=60)

                                              CACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCT                                                <  SRR4302541.373492/94‑1 (MQ=60)

                                               ACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTT                                               <  SRR4302541.1557677/94‑1 (MQ=60)

                                                CGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTT                                              <  SRR4302541.7706841/94‑1 (MQ=60)

                                                CGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTT                                              <  SRR4302541.5641883/94‑1 (MQ=60)

                                                 GCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTG                                             <  SRR4302541.1412575/94‑1 (MQ=60)

                                                 GCTTATCACTACCCACAACAGATGGGGATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTG                                             >  SRR4302541.5486955/1‑94 (MQ=60)

                                                  CTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGA                                            >  SRR4302541.1146384/1‑94 (MQ=60)

                                                    TATCACTACCCACAACAGATTGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAG                                          <  SRR4302541.6429873/94‑1 (MQ=60)

                                                    TATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAG                                          <  SRR4302541.3510716/94‑1 (MQ=60)

                                                    TATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAG                                          <  SRR4302541.259565/94‑1 (MQ=60)

                                                    TATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAG                                          <  SRR4302541.4333457/94‑1 (MQ=60)

                                                    TATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAG                                          >  SRR4302541.1834443/1‑94 (MQ=60)

                                                    TATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAG                                          <  SRR4302541.8132901/94‑1 (MQ=60)

                                                    TATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAG                                          <  SRR4302541.5541992/94‑1 (MQ=60)

                                                     ATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGG                                         <  SRR4302541.7745339/94‑1 (MQ=60)

                                                      TCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGG                                        >  SRR4302541.5064797/1‑94 (MQ=60)

                                                       tactagccacgagcggtgcgtataaaggcCCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGA                                       <  SRR4302541.6297414/65‑1 (MQ=60)

                                                       CACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGA                                       >  SRR4302541.2626693/1‑94 (MQ=60)

                                                       CACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGA                                       >  SRR4302541.1514545/1‑94 (MQ=60)

                                                       CACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGA                                       >  SRR4302541.6490820/1‑94 (MQ=60)

                                                       CACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGA                                       >  SRR4302541.1896833/1‑94 (MQ=60)

                                                       CACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGGGACATGCCGACAGCGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGC                                       >  SRR4302541.7270837/1‑94 (MQ=60)

                                                        ACTACCCACAACAGATGGTTATAAAGCACCCCGTGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGAT                                      <  SRR4302541.8582986/94‑1 (MQ=60)

                                                        ACTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGAT                                      >  SRR4302541.1892900/1‑94 (MQ=60)

                                                         CTACCCACAACAGATGGGTATAAAGCATCCCGAGGCTGAGTGACAGGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATC                                     <  SRR4302541.1336018/94‑1 (MQ=60)

                                                         CTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATC                                     >  SRR4302541.2783904/1‑94 (MQ=60)

                                                         CTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATC                                     <  SRR4302541.4421532/94‑1 (MQ=60)

                                                         CTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATC                                     >  SRR4302541.3482554/1‑94 (MQ=60)

                                                         CTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATC                                     <  SRR4302541.1877189/94‑1 (MQ=60)

                                                         CTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATC                                     <  SRR4302541.7095590/94‑1 (MQ=60)

                                                         CTACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATC                                     <  SRR4302541.7575603/94‑1 (MQ=60)

                                                          TGCCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCG                                    <  SRR4302541.1734101/94‑1 (MQ=60)

                                                          TACCCACAACGGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCG                                    <  SRR4302541.7938790/94‑1 (MQ=60)

                                                          TACCCACAACAGATGGGTATAAAGCGCCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCG                                    <  SRR4302541.8700438/94‑1 (MQ=60)

                                                          TACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCG                                    <  SRR4302541.2591425/94‑1 (MQ=60)

                                                          TACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCG                                    <  SRR4302541.2780451/94‑1 (MQ=60)

                                                           ACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGA                                   >  SRR4302541.3950064/1‑94 (MQ=60)

                                                           ACCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGA                                   >  SRR4302541.5938913/1‑94 (MQ=60)

                                                            CCCACAACAGATGGGTATAAAGCCCCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAATCCGAGCAGCAAGCCTTTGAAGGGATCGAT                                  <  SRR4302541.6657114/94‑1 (MQ=60)

                                                            CCCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGAT                                  >  SRR4302541.5445137/1‑94 (MQ=60)

                                                            CCCACAACAGAGGGGGAAAAAGCACCCCGAGGCCGAGTGACAGGCCGACAGAGAGAAAGAACAAACCGAGCAGCAAGCCcgcgaagggaccgaa                                  >  SRR4302541.6780285/1‑79 (MQ=49)

                                                             CCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATA                                 <  SRR4302541.3053688/94‑1 (MQ=60)

                                                             CCACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCGTTGAAGGGATCGATA                                 >  SRR4302541.7890105/1‑94 (MQ=60)

                                                              CACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAG                                <  SRR4302541.2126306/94‑1 (MQ=60)

                                                               ACAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGC                               <  SRR4302541.1578760/94‑1 (MQ=60)

                                                                CAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCG                              >  SRR4302541.3704260/1‑94 (MQ=60)

                                                                CAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCC                              <  SRR4302541.111658/94‑1 (MQ=60)

                                                                CAACAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCC                              <  SRR4302541.4763865/94‑1 (MQ=60)

                                                                   CAGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTT                           <  SRR4302541.2243534/94‑1 (MQ=60)

                                                                    AGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTT                          <  SRR4302541.703698/94‑1 (MQ=60)

                                                                    AGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTT                          <  SRR4302541.3608068/94‑1 (MQ=60)

                                                                    AGATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTT                          >  SRR4302541.7304802/1‑94 (MQ=60)

                                                                    AGATGAGTATAAAGCACCACGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTT                          <  SRR4302541.3332405/94‑1 (MQ=60)

                                                                     GATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTC                         <  SRR4302541.6241334/94‑1 (MQ=60)

                                                                      ATGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCC                        <  SRR4302541.7376037/94‑1 (MQ=60)

                                                                       TGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCA                       <  SRR4302541.4459618/94‑1 (MQ=60)

                                                                       TGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCA                       <  SRR4302541.7723506/94‑1 (MQ=60)

                                                                       TGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCA                       <  SRR4302541.368348/94‑1 (MQ=60)

                                                                       TGGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCA                       >  SRR4302541.3880384/1‑94 (MQ=60)

                                                                        GGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAG                      >  SRR4302541.7694412/1‑94 (MQ=60)

                                                                        GGGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAG                      >  SRR4302541.2987566/1‑94 (MQ=60)

                                                                         GGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGT                     >  SRR4302541.2061189/1‑94 (MQ=60)

                                                                         GGTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGT                     >  SRR4302541.466250/1‑94 (MQ=60)

                                                                          GTATAAAGCCCCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTT                    <  SRR4302541.8221218/94‑1 (MQ=60)

                                                                          GTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTT                    <  SRR4302541.5624711/94‑1 (MQ=60)

                                                                          GTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTT                    <  SRR4302541.1065891/94‑1 (MQ=60)

                                                                          GTATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTT                    <  SRR4302541.742478/94‑1 (MQ=60)

                                                                            ATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCA                  >  SRR4302541.1935272/1‑94 (MQ=60)

                                                                            ATAAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCA                  <  SRR4302541.5366565/94‑1 (MQ=60)

                                                                              AAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATG                <  SRR4302541.8568293/94‑1 (MQ=60)

                                                                              AAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATG                >  SRR4302541.5035219/1‑94 (MQ=60)

                                                                              AAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATG                <  SRR4302541.1319845/94‑1 (MQ=60)

                                                                              AAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATG                <  SRR4302541.5137684/94‑1 (MQ=60)

                                                                              AAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATG                <  SRR4302541.1637538/94‑1 (MQ=60)

                                                                              AAAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATG                <  SRR4302541.6085045/94‑1 (MQ=60)

                                                                               AAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGG               <  SRR4302541.8358134/94‑1 (MQ=60)

                                                                               AAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGG               >  SRR4302541.1986002/1‑94 (MQ=60)

                                                                               AAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATAGATAGCCGTTTCCAGTTCATGG               >  SRR4302541.818082/1‑94 (MQ=60)

                                                                               AAGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCCTTGAATGGATCGATAGCCGTTTCCAGTTCATGG               >  SRR4302541.3450208/1‑94 (MQ=60)

                                                                                AGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCCGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGC              <  SRR4302541.21023/94‑1 (MQ=60)

                                                                                AGCACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAATTCATGGG              >  SRR4302541.2488646/1‑94 (MQ=60)

                                                                                  CACCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGA            >  SRR4302541.821423/1‑94 (MQ=60)

                                                                                    CCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTTAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATA          >  SRR4302541.2786241/1‑94 (MQ=60)

                                                                                    CCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATA          <  SRR4302541.8836027/94‑1 (MQ=60)

                                                                                    CCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATA          >  SRR4302541.4969396/1‑94 (MQ=60)

                                                                                    CCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATA          >  SRR4302541.8349809/1‑94 (MQ=60)

                                                                                    CCCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATA          <  SRR4302541.4423307/94‑1 (MQ=60)

                                                                                     CCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATAT         <  SRR4302541.5999897/94‑1 (MQ=60)

                                                                                     CCCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATAT         <  SRR4302541.1388337/94‑1 (MQ=60)

                                                                                      CCGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATT        <  SRR4302541.7638326/94‑1 (MQ=60)

                                                                                       CGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTC       <  SRR4302541.683637/94‑1 (MQ=60)

                                                                                       CGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTC       >  SRR4302541.4380456/1‑94 (MQ=60)

                                                                                       CGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTC       >  SRR4302541.484626/1‑94 (MQ=60)

                                                                                       CGAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTC       <  SRR4302541.683638/94‑1 (MQ=60)

                                                                                        GAGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCA      >  SRR4302541.6699802/1‑94 (MQ=60)

                                                                                         AGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAATGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCAC     <  SRR4302541.19901/94‑1 (MQ=60)

                                                                                         AGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCAC     <  SRR4302541.3089087/94‑1 (MQ=60)

                                                                                         AGGCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCAC     <  SRR4302541.3826234/94‑1 (MQ=60)

                                                                                           GCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTT   >  SRR4302541.4215091/1‑94 (MQ=60)

                                                                                           GCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTT   <  SRR4302541.5078834/94‑1 (MQ=60)

                                                                                           GCTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTT   <  SRR4302541.5542827/94‑1 (MQ=60)

                                                                                            CTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTT  <  SRR4302541.5284099/94‑1 (MQ=60)

                                                                                            CTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTT  >  SRR4302541.8685169/1‑94 (MQ=60)

                                                                                            CTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTT  >  SRR4302541.6144948/1‑94 (MQ=60)

                                                                                            CTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTT  <  SRR4302541.1104437/94‑1 (MQ=60)

GCGCCAGCAGATACAGCACGAGAATTTTCACCGCCACCAGCACAACCACGCTTATCACTACCCACAACAGATGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTT  >  NC_000913/3477305‑3477490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`