Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,483,905 T→C V50A (GTG→GCG)  crp → cyclic AMP receptor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,483,9050TC100.0% 1097.4 / NA 317V50A (GTG→GCG) crpcyclic AMP receptor protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (147/170);  total (147/170)

Only 100 of 324 total aligned reads displayed.

ACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGG  >  NC_000913/3483815‑3483994
                                                                                          |                                                                                         
 caTTCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCt                                                                                        <  2:7311648/93‑1 (MQ=255)
  aTTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCCCTGTGGCAGCGCTg                                                                                       >  2:7531548/1‑93 (MQ=255)
   ttCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGa                                                                                      >  2:8372493/1‑93 (MQ=255)
   ttCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGa                                                                                      <  2:8123423/93‑1 (MQ=255)
    tCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGAt                                                                                     <  2:7780923/93‑1 (MQ=255)
    tCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGAt                                                                                     <  2:8240799/93‑1 (MQ=255)
     cATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATc                                                                                    >  2:2188831/1‑93 (MQ=255)
      atgaGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCa                                                                                   >  1:2575535/4‑93 (MQ=255)
      aTAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCa                                                                                   <  1:3379413/93‑1 (MQ=255)
       tgaGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCaa                                                                                  >  1:1917103/3‑93 (MQ=255)
        aaGTACCAATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCaaa                                                                                 <  1:6246340/93‑1 (MQ=255)
         aGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAg                                                                                <  1:739321/93‑1 (MQ=255)
          gTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGa                                                                               >  1:5943979/1‑93 (MQ=255)
          gTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGa                                                                               <  1:6722836/93‑1 (MQ=255)
          gTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGa                                                                               <  1:1376238/93‑1 (MQ=255)
           tACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGAc                                                                              >  1:524654/1‑93 (MQ=255)
              ccATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGaa                                                                           <  1:1015124/93‑1 (MQ=255)
              ccATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGaa                                                                           <  1:5375137/93‑1 (MQ=255)
              ccATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGaa                                                                           >  1:4919300/1‑93 (MQ=255)
               cATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAag                                                                          >  1:8396444/1‑93 (MQ=255)
               cATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAag                                                                          <  1:3051019/93‑1 (MQ=255)
                aTCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAaga                                                                         >  1:3210160/1‑93 (MQ=255)
                aTCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAaga                                                                         <  1:8585581/93‑1 (MQ=255)
                aTCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAaga                                                                         <  1:1978146/93‑1 (MQ=255)
                 tCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAagag                                                                        >  2:5239528/1‑93 (MQ=255)
                   cAAGAGTACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAggg                                                                      >  2:8552392/1‑93 (MQ=255)
                    aaGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGt                                                                     >  1:8061773/1‑93 (MQ=255)
                     agagCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAgggga                                                                    >  2:2626966/1‑91 (MQ=255)
                     agagCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTa                                                                    >  1:2225554/1‑93 (MQ=255)
                      gagCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTaa                                                                   >  2:2933209/1‑93 (MQ=255)
                       agCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTaaa                                                                  >  1:7927963/1‑93 (MQ=255)
                           cGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAACGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGTTAAAGaaa                                                              >  1:6356995/1‑93 (MQ=255)
                           cGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGaaa                                                              >  2:3512822/1‑93 (MQ=255)
                           cGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGaaa                                                              >  2:1920392/1‑93 (MQ=255)
                             cTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATg                                                            <  1:1134112/93‑1 (MQ=255)
                              ttATTCGCCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGa                                                           <  2:2785392/93‑1 (MQ=255)
                              ttATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGa                                                           <  2:4188537/93‑1 (MQ=255)
                              ttATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGa                                                           >  1:468720/1‑93 (MQ=255)
                              ttATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGa                                                           >  1:3673041/1‑93 (MQ=255)
                               tATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGAt                                                          >  2:739234/1‑93 (MQ=255)
                               tATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGAt                                                          <  1:3844370/93‑1 (MQ=255)
                                 ttCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAGGAGGGGAAAGAAATGATcc                                                        >  2:7523726/1‑93 (MQ=255)
                                 ttCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATcc                                                        >  1:1687321/1‑93 (MQ=255)
                                 ttCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATcc                                                        <  2:8097456/93‑1 (MQ=255)
                                  tCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGGAAAGAAATGATccc                                                       >  1:6577598/1‑92 (MQ=255)
                                     ccAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCtctc                                                    >  2:3605615/1‑93 (MQ=255)
                                     ccAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCtctc                                                    >  2:792105/1‑93 (MQ=255)
                                      cAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTcc                                                   >  1:4525788/1‑93 (MQ=255)
                                      cAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTcc                                                   >  1:1883572/1‑93 (MQ=255)
                                       aGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCt                                                  >  2:6838718/1‑93 (MQ=255)
                                       aGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCt                                                  >  2:587386/1‑93 (MQ=255)
                                        gggTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTa                                                 <  2:3040849/93‑1 (MQ=255)
                                        gggTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTa                                                 >  1:2713704/1‑93 (MQ=255)
                                         ggTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTAt                                                <  2:4918925/93‑1 (MQ=255)
                                         ggTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTAt                                                <  1:7138262/93‑1 (MQ=255)
                                           tGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCt                                              >  1:664073/1‑93 (MQ=255)
                                            gAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTg                                             >  2:1527476/1‑93 (MQ=255)
                                            gAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTg                                             >  2:113829/1‑93 (MQ=255)
                                               aaaGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAAt                                          <  1:3249002/93‑1 (MQ=255)
                                                aaGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATc                                         <  2:6669457/93‑1 (MQ=255)
                                                aaGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATc                                         <  2:5568153/93‑1 (MQ=255)
                                                 aGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGCGGGTAAAGAAATGATCCTCTCCTATCTGAATcg                                        >  2:2406122/1‑92 (MQ=255)
                                                 aGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCa                                        <  1:8256001/93‑1 (MQ=255)
                                                 aGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCa                                        >  2:4645855/1‑93 (MQ=255)
                                                  gCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAg                                       >  2:2024071/1‑93 (MQ=255)
                                                  gCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAg                                       <  1:7876989/93‑1 (MQ=255)
                                                    ggAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAggg                                     <  2:1781602/93‑1 (MQ=255)
                                                    ggAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAggg                                     <  2:541244/93‑1 (MQ=255)
                                                    ggAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAggg                                     >  2:475514/1‑93 (MQ=255)
                                                     gAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAgggg                                    >  2:4524850/1‑92 (MQ=255)
                                                     gAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGt                                    >  1:3632191/1‑93 (MQ=255)
                                                      aaaCGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTg                                   >  2:8182788/1‑93 (MQ=255)
                                                         cGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGAtt                                >  1:5628603/1‑93 (MQ=255)
                                                         cGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGAtt                                >  2:378469/1‑93 (MQ=255)
                                                         cGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGAtt                                <  2:4423968/93‑1 (MQ=255)
                                                          gCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGAttt                               >  2:6380468/1‑93 (MQ=255)
                                                           cTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGAtttt                              <  2:2068372/93‑1 (MQ=255)
                                                           cTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGAtttt                              >  1:4254828/1‑93 (MQ=255)
                                                             gTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTAt                            >  2:5305105/1‑93 (MQ=255)
                                                              tactacATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCTTCTCCTATCTGAATCAGGGCGATTTTAtt                           >  2:841538/1‑93 (MQ=255)
                                                              tactacATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCCGAATCAGGGTGATTTTAtt                           <  1:6769757/93‑1 (MQ=255)
                                                               actacATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTg                          <  1:7260529/93‑1 (MQ=255)
                                                                 tacATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGc                        <  1:7685625/93‑1 (MQ=255)
                                                                  acATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCg                       >  2:3292008/1‑93 (MQ=255)
                                                                     tCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAAc                    >  2:5926284/1‑93 (MQ=255)
                                                                     tCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAAc                    <  1:6877259/93‑1 (MQ=255)
                                                                      cGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACt                   <  1:6418524/93‑1 (MQ=255)
                                                                       gTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTg                  >  2:6310936/1‑93 (MQ=255)
                                                                       gTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTg                  >  2:3897450/1‑93 (MQ=255)
                                                                        ttAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTgg                 <  2:1090991/93‑1 (MQ=255)
                                                                           aaGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGGAAAGTAATGATACTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGct              >  1:1609766/1‑92 (MQ=255)
                                                                              gCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGt           >  1:28151/1‑93 (MQ=255)
                                                                              gCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGt           <  1:2340434/93‑1 (MQ=255)
                                                                                tctGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGttt         <  2:6913241/93‑1 (MQ=255)
                                                                                tctGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGttt         <  2:1669466/93‑1 (MQ=255)
                                                                                tctGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGttt         <  1:5850712/93‑1 (MQ=255)
                                                                                  tgtgGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGa       >  1:2957171/1‑93 (MQ=255)
                                                                                    tgGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAag     <  2:938966/93‑1 (MQ=255)
                                                                                     ggCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAaga    <  1:7500115/93‑1 (MQ=255)
                                                                                     ggCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAaga    >  1:5076435/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGG  >  NC_000913/3483815‑3483994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCCA  >  NC_000913/3483812‑3483998
                                                                                             |                                                                                             
GCCACATTCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGC                                                                                               <  SRR4302541.2496558/94‑1 (MQ=60)
GCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGC                                                                                               <  SRR4302541.6789442/94‑1 (MQ=60)
 CCACATTCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCG                                                                                              <  SRR4302541.1033307/94‑1 (MQ=60)
 CCACATTCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCG                                                                                              >  SRR4302541.1098112/1‑94 (MQ=60)
 CCACATTCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCG                                                                                              >  SRR4302541.2379250/1‑94 (MQ=60)
 CCACATTCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCG                                                                                              >  SRR4302541.5027871/1‑94 (MQ=60)
 CCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCG                                                                                              >  SRR4302541.5320357/1‑94 (MQ=60)
  CACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGC                                                                                             <  SRR4302541.7273619/94‑1 (MQ=60)
    CATTCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTG                                                                                           <  SRR4302541.2408399/94‑1 (MQ=60)
     ATTCATGAGTACCCATCCAAGAGCACGCTTATTTACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGA                                                                                          >  SRR4302541.4789524/1‑94 (MQ=60)
     ATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGA                                                                                          <  SRR4302541.4455503/94‑1 (MQ=60)
      TTCATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGAT                                                                                         <  SRR4302541.135551/94‑1 (MQ=60)
       TCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATC                                                                                        <  SRR4302541.742662/94‑1 (MQ=60)
        CATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCA                                                                                       >  SRR4302541.2601361/1‑94 (MQ=60)
         ATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAA                                                                                      >  SRR4302541.3646819/1‑94 (MQ=60)
         ATGAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAA                                                                                      >  SRR4302541.1935544/1‑94 (MQ=60)
         ATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTATATCGTTAAAGGCTCTGTGGCAGCGCTGATCAA                                                                                      >  SRR4302541.6870556/1‑94 (MQ=60)
         ATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAA                                                                                      <  SRR4302541.3413099/94‑1 (MQ=60)
          TAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAA                                                                                     >  SRR4302541.3368357/1‑94 (MQ=60)
           AAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAG                                                                                    <  SRR4302541.351623/94‑1 (MQ=60)
           AAGTACCAATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAG                                                                                    <  SRR4302541.6310155/94‑1 (MQ=60)
            AGTACCCCACCAAGAGCACGCTTATTCACCAAGGTGAAAAAAGGGAAACGCTGTTCTACATCCTTAAAGGCTCTGTGGCAGCGCTGATCAAAGA                                                                                   <  SRR4302541.3056673/94‑1 (MQ=60)
            AGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGA                                                                                   <  SRR4302541.746346/94‑1 (MQ=60)
            AGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGA                                                                                   >  SRR4302541.6004544/1‑94 (MQ=60)
            AGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGA                                                                                   <  SRR4302541.2627306/94‑1 (MQ=60)
             GTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGAC                                                                                  <  SRR4302541.1389773/94‑1 (MQ=60)
             GTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGAC                                                                                  >  SRR4302541.529561/1‑94 (MQ=60)
             GTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGAC                                                                                  <  SRR4302541.6794580/94‑1 (MQ=60)
             GTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGAC                                                                                  <  SRR4302541.5950095/94‑1 (MQ=60)
              gacaCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACG                                                                                 <  SRR4302541.7302815/90‑1 (MQ=60)
              TACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACG                                                                                 <  SRR4302541.2720458/94‑1 (MQ=60)
              TACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACG                                                                                 <  SRR4302541.3269324/94‑1 (MQ=60)
              TACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACG                                                                                 <  SRR4302541.3962844/94‑1 (MQ=60)
                CCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAA                                                                               >  SRR4302541.6315057/1‑94 (MQ=60)
                CCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAA                                                                               >  SRR4302541.4969499/1‑94 (MQ=60)
                CCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAA                                                                               >  SRR4302541.5583961/1‑94 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              <  SRR4302541.6497179/94‑1 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              <  SRR4302541.2751919/94‑1 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              <  SRR4302541.3866223/94‑1 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              >  SRR4302541.4458193/1‑94 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              <  SRR4302541.5430312/94‑1 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              <  SRR4302541.1024508/94‑1 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              <  SRR4302541.7726996/94‑1 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              >  SRR4302541.8487313/1‑94 (MQ=60)
                 CCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAG                                                                              <  SRR4302541.217398/94‑1 (MQ=60)
                  CATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGA                                                                             <  SRR4302541.3081897/94‑1 (MQ=60)
                  CATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGA                                                                             >  SRR4302541.3242590/1‑94 (MQ=60)
                   ATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAG                                                                            <  SRR4302541.7509773/94‑1 (MQ=60)
                   ATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAG                                                                            >  SRR4302541.109729/1‑94 (MQ=60)
                   ATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAG                                                                            >  SRR4302541.134972/1‑94 (MQ=60)
                   ATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAG                                                                            >  SRR4302541.5254782/1‑94 (MQ=60)
                   ATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAG                                                                            <  SRR4302541.8677738/94‑1 (MQ=60)
                   ATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAG                                                                            <  SRR4302541.6103253/94‑1 (MQ=60)
                   ATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAG                                                                            <  SRR4302541.8438242/94‑1 (MQ=60)
                   ATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAG                                                                            <  SRR4302541.1997253/94‑1 (MQ=60)
                    TCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGG                                                                           <  SRR4302541.5843561/94‑1 (MQ=60)
                    TCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGG                                                                           <  SRR4302541.7884815/94‑1 (MQ=60)
                     CCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTTTGTGGCAGCGCTGATCAAAGACGAAGAGGG                                                                          <  SRR4302541.5631500/94‑1 (MQ=60)
                     CCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGG                                                                          >  SRR4302541.5793297/1‑94 (MQ=60)
                     CCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGG                                                                          <  SRR4302541.8907101/94‑1 (MQ=60)
                      CAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGT                                                                         >  SRR4302541.8150338/1‑94 (MQ=60)
                       AAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTA                                                                        <  SRR4302541.7972537/94‑1 (MQ=60)
                       AAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTA                                                                        >  SRR4302541.2247123/1‑94 (MQ=60)
                       AAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTA                                                                        >  SRR4302541.6922839/1‑94 (MQ=60)
                        AGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAA                                                                       >  SRR4302541.2277321/1‑94 (MQ=60)
                         GAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAA                                                                      >  SRR4302541.8015256/1‑94 (MQ=60)
                         GAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAA                                                                      <  SRR4302541.4935171/94‑1 (MQ=60)
                         GAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAA                                                                      >  SRR4302541.2849966/1‑94 (MQ=60)
                          AGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAG                                                                     <  SRR4302541.698680/94‑1 (MQ=60)
                          AGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAG                                                                     <  SRR4302541.4575159/94‑1 (MQ=60)
                            CACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAA                                                                   <  SRR4302541.5010857/94‑1 (MQ=60)
                            CACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAA                                                                   <  SRR4302541.6583705/94‑1 (MQ=60)
                             ACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAACGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGTTAAAGAAA                                                                  >  SRR4302541.6421990/1‑94 (MQ=60)
                               GCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATG                                                                >  SRR4302541.4123532/1‑94 (MQ=60)
                                CTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGA                                                               >  SRR4302541.1785328/1‑94 (MQ=60)
                                CTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGA                                                               <  SRR4302541.1144843/94‑1 (MQ=60)
                                CTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGA                                                               >  SRR4302541.3710277/1‑94 (MQ=60)
                                CTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGA                                                               >  SRR4302541.473181/1‑94 (MQ=60)
                                 TTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGAT                                                              >  SRR4302541.2804227/1‑94 (MQ=60)
                                 TTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGAT                                                              <  SRR4302541.7236080/94‑1 (MQ=60)
                                  TATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATC                                                             <  SRR4302541.3883084/94‑1 (MQ=60)
                                   ATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCC                                                            >  SRR4302541.1710157/1‑94 (MQ=60)
                                   ATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCC                                                            >  SRR4302541.1703896/1‑94 (MQ=60)
                                    TTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCT                                                           >  SRR4302541.6644909/1‑94 (MQ=60)
                                    TTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGGAAAGAAATGATCCC                                                           >  SRR4302541.6644908/1‑94 (MQ=60)
                                    ATCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCT                                                           <  SRR4302541.1459076/94‑1 (MQ=60)
                                     TCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTC                                                          <  SRR4302541.5979690/94‑1 (MQ=60)
                                     TCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTC                                                          <  SRR4302541.6001902/94‑1 (MQ=60)
                                     TCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTC                                                          >  SRR4302541.5116137/1‑94 (MQ=60)
                                      CACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCT                                                         <  SRR4302541.6791610/94‑1 (MQ=60)
                                      CACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCT                                                         <  SRR4302541.147020/94‑1 (MQ=60)
                                       ACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTC                                                        <  SRR4302541.1700986/94‑1 (MQ=60)
                                       ACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTC                                                        >  SRR4302541.8400065/1‑94 (MQ=60)
                                        CCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCC                                                       >  SRR4302541.5024787/1‑94 (MQ=60)
                                        CCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCC                                                       >  SRR4302541.4571466/1‑94 (MQ=60)
                                        CCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCC                                                       <  SRR4302541.1886349/94‑1 (MQ=60)
                                        CCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCC                                                       >  SRR4302541.1901664/1‑94 (MQ=60)
                                         CAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCT                                                      <  SRR4302541.6821504/94‑1 (MQ=60)
                                          AGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTA                                                     >  SRR4302541.2740750/1‑94 (MQ=60)
                                            GGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATC                                                   <  SRR4302541.7214328/94‑1 (MQ=60)
                                             GTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCT                                                  >  SRR4302541.670327/1‑94 (MQ=60)
                                             GTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCT                                                  >  SRR4302541.7844394/1‑94 (MQ=60)
                                                AAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAA                                               <  SRR4302541.972730/94‑1 (MQ=60)
                                                AAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAA                                               >  SRR4302541.1929866/1‑94 (MQ=60)
                                                 AAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAAT                                              <  SRR4302541.5327609/94‑1 (MQ=60)
                                                 AAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAAT                                              >  SRR4302541.6016855/1‑94 (MQ=60)
                                                  AAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGTTCCTCTCCTATCTGAATC                                             <  SRR4302541.301842/94‑1 (MQ=60)
                                                  AAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATC                                             <  SRR4302541.3281798/94‑1 (MQ=60)
                                                    AGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAG                                           <  SRR4302541.8345899/94‑1 (MQ=60)
                                                     GCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATTAGG                                          <  SRR4302541.6691312/94‑1 (MQ=60)
                                                     GCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGG                                          <  SRR4302541.7963552/94‑1 (MQ=60)
                                                     GCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGG                                          <  SRR4302541.1112356/94‑1 (MQ=60)
                                                     GCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGG                                          <  SRR4302541.7499969/94‑1 (MQ=60)
                                                      CGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGG                                         <  SRR4302541.6407566/94‑1 (MQ=60)
                                                       GGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGT                                        >  SRR4302541.3669018/1‑94 (MQ=60)
                                                         AAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGA                                      >  SRR4302541.297418/1‑94 (MQ=60)
                                                          AACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGAT                                     >  SRR4302541.8103186/1‑94 (MQ=60)
                                                           ACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATT                                    >  SRR4302541.5686183/1‑94 (MQ=60)
                                                           ACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATT                                    <  SRR4302541.2843921/94‑1 (MQ=60)
                                                             GCTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTT                                  >  SRR4302541.4297357/1‑94 (MQ=60)
                                                              CTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTA                                 >  SRR4302541.3694912/1‑94 (MQ=60)
                                                              CTGTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTA                                 <  SRR4302541.7697156/94‑1 (MQ=60)
                                                                GTACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATT                               <  SRR4302541.2147706/94‑1 (MQ=60)
                                                                 TACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTG                              <  SRR4302541.8503631/94‑1 (MQ=60)
                                                                 TACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTG                              <  SRR4302541.8503632/94‑1 (MQ=60)
                                                                 TACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTG                              <  SRR4302541.8323642/94‑1 (MQ=60)
                                                                 TACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCCGAATCAGGGTGATTTTATTG                              <  SRR4302541.6842157/94‑1 (MQ=60)
                                                                 TACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCCGAATCAGGGTGATTTTATTG                              <  SRR4302541.6842158/94‑1 (MQ=60)
                                                                  ACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG                             <  SRR4302541.7337983/94‑1 (MQ=60)
                                                                  ACTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG                             >  SRR4302541.6756369/1‑94 (MQ=60)
                                                                   CTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGTC                            >  SRR4302541.3379319/1‑94 (MQ=60)
                                                                   CTACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTAGC                            >  SRR4302541.3379318/1‑94 (MQ=60)
                                                                    TACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGGAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCG                           >  SRR4302541.1950766/1‑94 (MQ=60)
                                                                    TACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCG                           <  SRR4302541.7767342/94‑1 (MQ=60)
                                                                    TACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCG                           <  SRR4302541.2365871/94‑1 (MQ=60)
                                                                    TACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCG                           >  SRR4302541.397950/1‑94 (MQ=60)
                                                                    TACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCG                           <  SRR4302541.8083547/94‑1 (MQ=60)
                                                                    TACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCG                           <  SRR4302541.7187364/94‑1 (MQ=60)
                                                                    TACATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCG                           <  SRR4302541.8296932/94‑1 (MQ=60)
                                                                      CATCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAA                         >  SRR4302541.3138114/1‑94 (MQ=60)
                                                                        TCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAATAAATGATCCTCTCCTAGCTGAATCAGGGTGATTTTATTGGCGAACT                       <  SRR4302541.7567256/94‑1 (MQ=60)
                                                                        TCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACT                       <  SRR4302541.6950695/94‑1 (MQ=60)
                                                                        TCGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACT                       <  SRR4302541.649901/94‑1 (MQ=60)
                                                                         CGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTG                      <  SRR4302541.6483967/94‑1 (MQ=60)
                                                                         CGTTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTG                      <  SRR4302541.8005907/94‑1 (MQ=60)
                                                                           TTAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGG                    <  SRR4302541.3178550/94‑1 (MQ=60)
                                                                            TAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGC                   <  SRR4302541.4592841/94‑1 (MQ=60)
                                                                            TAAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGC                   >  SRR4302541.1914558/1‑94 (MQ=60)
                                                                             AAAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGGAAAGTAATGATACTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCT                  >  SRR4302541.1625765/1‑94 (MQ=60)
                                                                              AAGGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGAGCCT                 <  SRR4302541.513503/94‑1 (MQ=60)
                                                                                GGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGT               >  SRR4302541.28388/1‑94 (MQ=60)
                                                                                GGCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGT               <  SRR4302541.6442768/94‑1 (MQ=60)
                                                                                 GCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTT              <  SRR4302541.8025821/94‑1 (MQ=60)
                                                                                 GCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTT              <  SRR4302541.2363166/94‑1 (MQ=60)
                                                                                 GCTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTT              >  SRR4302541.1693038/1‑94 (MQ=60)
                                                                                  CTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTT             >  SRR4302541.2361574/1‑94 (MQ=60)
                                                                                  CTCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTT             >  SRR4302541.6471101/1‑94 (MQ=60)
                                                                                   TCTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTG            <  SRR4302541.5910208/94‑1 (MQ=60)
                                                                                    CTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTCTCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGA           >  SRR4302541.3677255/1‑94 (MQ=60)
                                                                                    CTGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGA           >  SRR4302541.2986905/1‑94 (MQ=60)
                                                                                     TGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAA          <  SRR4302541.22805/94‑1 (MQ=60)
                                                                                     TGTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAA          >  SRR4302541.1967805/1‑94 (MQ=60)
                                                                                      GTGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAG         <  SRR4302541.3807211/94‑1 (MQ=60)
                                                                                       TGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGA        >  SRR4302541.5128595/1‑94 (MQ=60)
                                                                                       TGGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGA        >  SRR4302541.6849480/1‑94 (MQ=60)
                                                                                        GGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAG       <  SRR4302541.7580295/94‑1 (MQ=60)
                                                                                        GGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAG       <  SRR4302541.5422278/94‑1 (MQ=60)
                                                                                        GGCAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAG       <  SRR4302541.3248663/94‑1 (MQ=60)
                                                                                          CAGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGG     <  SRR4302541.7455192/94‑1 (MQ=60)
                                                                                           AGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGTGC    >  SRR4302541.559816/1‑94 (MQ=60)
                                                                                           AGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGC    >  SRR4302541.1026402/1‑94 (MQ=60)
                                                                                           AGCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGC    >  SRR4302541.559815/1‑94 (MQ=60)
                                                                                            GCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATGAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCC   <  SRR4302541.7019995/94‑1 (MQ=60)
                                                                                            GCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCC   <  SRR4302541.7033615/94‑1 (MQ=60)
                                                                                            GCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCC   <  SRR4302541.186287/94‑1 (MQ=60)
                                                                                            GCGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCC   <  SRR4302541.7033614/94‑1 (MQ=60)
                                                                                             CGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCCA  <  SRR4302541.1913006/94‑1 (MQ=60)
                                                                                             CGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCCA  <  SRR4302541.3415563/94‑1 (MQ=60)
                                                                                             CGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCCA  <  SRR4302541.3415564/94‑1 (MQ=60)
                                                                                             CGCTGATCAAAGACGAAGAGGGGAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCCG  >  SRR4302541.4673448/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCCA  >  NC_000913/3483812‑3483998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑