Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,500,011 G→A R12Q (CGG→CAG)  b3372 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,500,0110GA100.0% 1249.6 / NA 352R12Q (CGG→CAG) b3372hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (204/148);  total (204/148)

Only 100 of 374 total aligned reads displayed.

ATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGC  >  NC_000913/3499921‑3500100
                                                                                          |                                                                                         
atatTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCagcagc                                                                                         <  1:1956110/93‑1 (MQ=255)
 tatTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCt                                                                                        >  2:7307460/1‑93 (MQ=255)
 tatTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTAACTGCGGCCACCAGCAGCt                                                                                        >  2:5230946/1‑93 (MQ=255)
 tatTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGCCTGTTTCTCTGCGGCCACCCGCAGcg                                                                                        >  1:1046504/1‑92 (MQ=255)
    tAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGcc                                                                                     <  2:2283580/93‑1 (MQ=255)
    tAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGcc                                                                                     <  1:7043916/93‑1 (MQ=255)
     aaTCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCCCCCGCAGCTGCCt                                                                                    >  1:7849732/1‑93 (MQ=255)
      aTCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTa                                                                                   >  2:6898468/1‑93 (MQ=255)
       tCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTAt                                                                                  >  2:6579418/1‑93 (MQ=255)
       tCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTAt                                                                                  >  2:5660297/1‑93 (MQ=255)
       tCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTAt                                                                                  >  2:4132546/1‑93 (MQ=255)
          ctctCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGa                                                                               >  1:5294197/1‑93 (MQ=255)
          ctctCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAAAAGGTATGTTTACCTGCGGCCACAAGAAGCTGCCTATTGa                                                                               >  2:7510707/1‑93 (MQ=255)
           tctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGaa                                                                              <  1:3580598/93‑1 (MQ=255)
           tctcCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGaa                                                                              >  1:8551409/1‑93 (MQ=255)
              cccggcccggCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAacac                                                                           <  2:1126915/93‑1 (MQ=255)
              cccggcccggCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAacac                                                                           >  2:4550663/1‑93 (MQ=255)
              cccggcccggCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGGATGTTTACCTGCGGCCACCCGCAGCTGCCTATTTTacac                                                                           >  2:1542934/1‑93 (MQ=255)
               ccggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACg                                                                          >  1:5438493/1‑93 (MQ=255)
               ccggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACg                                                                          >  1:8302043/1‑93 (MQ=255)
               ccggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACg                                                                          >  2:871254/1‑93 (MQ=255)
                 ggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCa                                                                        >  1:8448888/1‑93 (MQ=255)
                 ggcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCa                                                                        <  1:6206984/93‑1 (MQ=255)
                 ggcccggcAACGGGACGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCa                                                                        <  1:6886930/93‑1 (MQ=255)
                  gcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAt                                                                       >  2:168294/1‑93 (MQ=255)
                  gcccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAt                                                                       >  2:348085/1‑93 (MQ=255)
                    ccggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAttt                                                                     >  1:3257683/1‑93 (MQ=255)
                     cggcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTc                                                                    >  2:4568515/1‑93 (MQ=255)
                       gcAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGt                                                                  >  1:387026/1‑93 (MQ=255)
                       gcAACGGGCCGGATTGACGCAAGGAGTTACCCGATGAAAACAGGTATTTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGt                                                                  <  1:2827380/93‑1 (MQ=255)
                       gcAAAGGGCCGGATTTTCGGAAGGAAGTTCCCGATGAAAACAGGTATGGTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGt                                                                  <  1:8431322/93‑1 (MQ=255)
                        cAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTg                                                                 >  2:1607343/1‑93 (MQ=255)
                         aaCGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGa                                                                <  1:3741783/93‑1 (MQ=255)
                         aaCGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGa                                                                >  1:1409884/1‑93 (MQ=255)
                          aCGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGAt                                                               >  2:6365694/1‑93 (MQ=255)
                          aCGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGAt                                                               <  1:2993713/93‑1 (MQ=255)
                          aCGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGAt                                                               <  2:6296562/93‑1 (MQ=255)
                          aCGGGCCGGAGTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGAt                                                               <  1:5784387/93‑1 (MQ=255)
                            gggCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGc                                                             <  2:1197084/93‑1 (MQ=255)
                             ggCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCa                                                            >  2:5093503/1‑93 (MQ=255)
                              gCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCaa                                                           >  2:3612841/1‑93 (MQ=255)
                                cGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGc                                                         >  1:7953656/1‑93 (MQ=255)
                                 ggATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCg                                                        >  1:751344/1‑93 (MQ=255)
                                  gATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGa                                                       >  2:4046837/1‑93 (MQ=255)
                                  gATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGa                                                       >  2:2326777/1‑93 (MQ=255)
                                  gATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGa                                                       >  1:4180742/1‑93 (MQ=255)
                                   aTTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAg                                                      <  1:5136000/93‑1 (MQ=255)
                                   aTTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAg                                                      >  1:2254608/1‑93 (MQ=255)
                                   aTTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAg                                                      >  2:5853233/1‑93 (MQ=255)
                                      tACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTg                                                   <  2:2377828/93‑1 (MQ=255)
                                         gCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGt                                                <  2:4442198/93‑1 (MQ=255)
                                         gCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGt                                                >  2:2675731/1‑93 (MQ=255)
                                          cAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGtt                                               <  1:3113561/93‑1 (MQ=255)
                                          cAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGtt                                               <  2:5584103/93‑1 (MQ=255)
                                           caGGAGTTTCCCGATGAAAACAGGTATGTTTTCCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTa                                              <  1:7266037/92‑1 (MQ=255)
                                           aaGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTa                                              >  2:86042/1‑93 (MQ=255)
                                               aGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTacgac                                          >  1:6596132/1‑93 (MQ=255)
                                                gTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTacgacg                                         >  2:1778043/1‑93 (MQ=255)
                                                   aCCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCa                                      >  1:6070576/1‑93 (MQ=255)
                                                     ccGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATc                                    >  1:6718011/1‑93 (MQ=255)
                                                     ccGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATc                                    <  1:4650852/93‑1 (MQ=255)
                                                     ccGATGAAAACAGGTATGTTAACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATc                                    <  2:4719838/93‑1 (MQ=255)
                                                      cGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCg                                   >  1:8731270/1‑93 (MQ=255)
                                                       gATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGa                                  <  1:6248822/93‑1 (MQ=255)
                                                         tGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGaaa                                >  2:6095968/1‑93 (MQ=255)
                                                          gAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAt                               >  2:7047140/1‑93 (MQ=255)
                                                           aaaaCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAtt                              >  2:3001065/1‑93 (MQ=255)
                                                              aCAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTgg                           <  2:2630054/93‑1 (MQ=255)
                                                               cAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTggg                          <  1:7910918/93‑1 (MQ=255)
                                                               cAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTggg                          >  2:8471592/1‑93 (MQ=255)
                                                                aGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTgggg                         >  1:2676463/1‑93 (MQ=255)
                                                                aGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTgggg                         >  1:3418783/1‑93 (MQ=255)
                                                                 ggTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGc                        <  1:7387961/93‑1 (MQ=255)
                                                                 ggTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGc                        <  1:6010234/93‑1 (MQ=255)
                                                                 ggTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGc                        >  2:5452340/1‑93 (MQ=255)
                                                                 ggTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGc                        >  2:1030787/1‑93 (MQ=255)
                                                                  gTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCg                       <  2:4238156/93‑1 (MQ=255)
                                                                  gTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATCTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCTAAATTAGGGGCg                       >  2:7830977/1‑93 (MQ=255)
                                                                    aTGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGt                     <  1:7632913/93‑1 (MQ=255)
                                                                    aTGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGt                     <  2:5001899/93‑1 (MQ=255)
                                                                     tGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTc                    <  2:3102466/93‑1 (MQ=255)
                                                                        ttACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGcc                 <  2:7903889/93‑1 (MQ=255)
                                                                          tccTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCg               <  2:2814838/92‑1 (MQ=255)
                                                                          aCCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCg               >  2:4602810/1‑93 (MQ=255)
                                                                          aCCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCg               <  1:5576958/93‑1 (MQ=255)
                                                                          aCCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCg               >  1:6422063/1‑93 (MQ=255)
                                                                           ccTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGc              <  1:4738143/93‑1 (MQ=255)
                                                                            cTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGcc             >  1:2147584/1‑92 (MQ=255)
                                                                            cTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCa             <  2:7686021/93‑1 (MQ=255)
                                                                             tGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCAc            <  2:8185618/93‑1 (MQ=255)
                                                                              gCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCAcg           <  1:1679286/93‑1 (MQ=255)
                                                                               cGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCAcgc          >  1:1179551/1‑93 (MQ=255)
                                                                               cGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCAcgc          <  2:6222784/93‑1 (MQ=255)
                                                                                 gCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGt        >  2:8040892/1‑93 (MQ=255)
                                                                                 gCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGt        >  1:5900722/1‑93 (MQ=255)
                                                                                  ccaccaGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGtt       <  2:2024348/93‑1 (MQ=255)
                                                                                  ccaccaGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGtt       <  1:2380440/93‑1 (MQ=255)
                                                                                   caccaGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTc      <  2:3285909/93‑1 (MQ=255)
                                                                                   caccaGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTc      >  2:1385417/1‑93 (MQ=255)
                                                                                       agcagcTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCgcgc  >  2:2171276/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGC  >  NC_000913/3499921‑3500100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGA  >  NC_000913/3499918‑3500104
                                                                                             |                                                                                             
GGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCA                                                                                               >  SRR4302541.4531985/1‑94 (MQ=60)
GGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCA                                                                                               <  SRR4302541.4549660/94‑1 (MQ=60)
 GAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAG                                                                                              <  SRR4302541.1793393/94‑1 (MQ=60)
 GAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAG                                                                                              <  SRR4302541.6267371/94‑1 (MQ=60)
 GAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAG                                                                                              >  SRR4302541.4574682/1‑94 (MQ=60)
 GAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGCATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAG                                                                                              <  SRR4302541.1793394/94‑1 (MQ=60)
  AATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGC                                                                                             <  SRR4302541.7748244/94‑1 (MQ=60)
   ATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCT                                                                                            <  SRR4302541.2760339/94‑1 (MQ=60)
   ATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCT                                                                                            <  SRR4302541.1974966/94‑1 (MQ=60)
   ATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCT                                                                                            >  SRR4302541.8432328/1‑94 (MQ=60)
    TATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTG                                                                                           >  SRR4302541.4449644/1‑94 (MQ=60)
    TATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTG                                                                                           <  SRR4302541.5910369/94‑1 (MQ=60)
    TATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTG                                                                                           <  SRR4302541.5730962/94‑1 (MQ=60)
     ATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGC                                                                                          >  SRR4302541.815293/1‑94 (MQ=60)
     ATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGC                                                                                          <  SRR4302541.8038477/94‑1 (MQ=60)
       TAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCCCCCGCAGCTGCCT                                                                                        >  SRR4302541.7935897/1‑94 (MQ=60)
       TAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCT                                                                                        <  SRR4302541.7118816/94‑1 (MQ=60)
       TAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCT                                                                                        <  SRR4302541.3287503/94‑1 (MQ=60)
        aacccccccCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTA                                                                                       <  SRR4302541.826310/85‑1 (MQ=60)
         ATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTAT                                                                                      <  SRR4302541.7667242/94‑1 (MQ=60)
         ATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTAT                                                                                      >  SRR4302541.7026487/1‑94 (MQ=60)
         ATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCCGCCTAT                                                                                      >  SRR4302541.5457753/1‑94 (MQ=60)
           CCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTG                                                                                    <  SRR4302541.2274802/94‑1 (MQ=60)
           CCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTG                                                                                    <  SRR4302541.6406648/94‑1 (MQ=60)
            CCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGA                                                                                   >  SRR4302541.5348695/1‑94 (MQ=60)
            CCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGA                                                                                   >  SRR4302541.4597117/1‑94 (MQ=60)
             CTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAA                                                                                  >  SRR4302541.2742302/1‑94 (MQ=60)
             CTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAA                                                                                  >  SRR4302541.8643316/1‑94 (MQ=60)
              TCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAAC                                                                                 <  SRR4302541.7712492/94‑1 (MQ=60)
              TCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAAC                                                                                 <  SRR4302541.3616884/94‑1 (MQ=60)
              TCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAAC                                                                                 >  SRR4302541.3100690/1‑94 (MQ=60)
               CTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACA                                                                                >  SRR4302541.5604550/1‑94 (MQ=60)
               CTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACA                                                                                >  SRR4302541.1238184/1‑94 (MQ=60)
               CTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACA                                                                                <  SRR4302541.8154549/94‑1 (MQ=60)
               CTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGCATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACA                                                                                >  SRR4302541.7963625/1‑94 (MQ=60)
                TCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGCAAACAGGTATATTTACCTGCGGCCACCAGCAGCTCCCTATTGAACAC                                                                               >  SRR4302541.7103605/1‑94 (MQ=60)
                TCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACAC                                                                               >  SRR4302541.7103606/1‑94 (MQ=60)
                TCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACAC                                                                               <  SRR4302541.3713165/94‑1 (MQ=60)
                TCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACAC                                                                               >  SRR4302541.3370116/1‑94 (MQ=60)
                TCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACAC                                                                               >  SRR4302541.8703764/1‑94 (MQ=60)
                 CCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCGGATGAAAACAGGTATGATTACCTGCGGCCACCAGCCGCTGCCTATTGAAAACG                                                                              >  SRR4302541.7948292/1‑94 (MQ=60)
                 CCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACG                                                                              >  SRR4302541.5494299/1‑94 (MQ=60)
                 CCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACG                                                                              >  SRR4302541.7948291/1‑94 (MQ=60)
                 CCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACG                                                                              >  SRR4302541.8392310/1‑94 (MQ=60)
                 CCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACG                                                                              <  SRR4302541.3494708/94‑1 (MQ=60)
                   CGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCA                                                                            >  SRR4302541.1175479/1‑94 (MQ=60)
                   CGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCA                                                                            >  SRR4302541.8540097/1‑94 (MQ=60)
                    GGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAT                                                                           <  SRR4302541.6270425/94‑1 (MQ=60)
                    GGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAT                                                                           <  SRR4302541.2801390/94‑1 (MQ=60)
                    GGCCCGGCAACGGGACGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCAT                                                                           <  SRR4302541.6960437/94‑1 (MQ=60)
                      CCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTT                                                                         >  SRR4302541.3290572/1‑94 (MQ=60)
                      CCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTT                                                                         <  SRR4302541.5393749/94‑1 (MQ=60)
                      CCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTT                                                                         <  SRR4302541.2215714/94‑1 (MQ=60)
                      CCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTT                                                                         >  SRR4302541.2360308/1‑94 (MQ=60)
                       CCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTC                                                                        <  SRR4302541.3014064/94‑1 (MQ=60)
                       CCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTC                                                                        >  SRR4302541.1217818/1‑94 (MQ=60)
                        CGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCG                                                                       >  SRR4302541.1884369/1‑94 (MQ=60)
                         GGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGT                                                                      <  SRR4302541.6303504/94‑1 (MQ=60)
                         GGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGT                                                                      >  SRR4302541.390600/1‑94 (MQ=60)
                         GGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGG                                                                      >  SRR4302541.1474064/1‑94 (MQ=60)
                          GCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTG                                                                     >  SRR4302541.8693875/1‑94 (MQ=60)
                          GCAACGGGCCGGATTGACGCAAGGAGTTACCCGATGAAAACAGGTATTTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTG                                                                     <  SRR4302541.2855884/94‑1 (MQ=60)
                          GCAAAGGGCCGGATTTTCGGAAGGAAGTTCCCGATGAAAACAGGTATGGTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTG                                                                     <  SRR4302541.8522418/94‑1 (MQ=60)
                           CAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGA                                                                    >  SRR4302541.1423637/1‑94 (MQ=60)
                           CAACGGGCCGGATTTACGCAAGGAGTTACCCGAGGCAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGTCTATTGAACACGCATTTCGTGA                                                                    >  SRR4302541.6364859/1‑94 (MQ=60)
                            AACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGAT                                                                   <  SRR4302541.3779442/94‑1 (MQ=60)
                            AACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGAT                                                                   >  SRR4302541.2919498/1‑94 (MQ=60)
                            AACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGAT                                                                   >  SRR4302541.6293648/1‑94 (MQ=60)
                             ACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATG                                                                  <  SRR4302541.2159040/94‑1 (MQ=60)
                             ACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATG                                                                  <  SRR4302541.3023930/94‑1 (MQ=60)
                             ACGGGCCGGAGTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATG                                                                  <  SRR4302541.5843185/94‑1 (MQ=60)
                                GGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAA                                                               <  SRR4302541.8536069/94‑1 (MQ=60)
                                GGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAA                                                               <  SRR4302541.3592537/94‑1 (MQ=60)
                                GGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAA                                                               >  SRR4302541.8201624/1‑94 (MQ=60)
                                 GCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAG                                                              <  SRR4302541.3159184/94‑1 (MQ=60)
                                  CCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGC                                                             >  SRR4302541.8041303/1‑94 (MQ=60)
                                  CCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGC                                                             <  SRR4302541.1521069/94‑1 (MQ=60)
                                   CGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCCCCAGACGCTGCCTGTTGACACCGCATTTCGTGATGCAAGCG                                                            >  SRR4302541.7355772/1‑94 (MQ=60)
                                   CGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGCTGCAAGCG                                                            >  SRR4302541.6857043/1‑94 (MQ=60)
                                   CGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCG                                                            >  SRR4302541.1103461/1‑94 (MQ=60)
                                   CGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCG                                                            >  SRR4302541.758441/1‑94 (MQ=60)
                                    GGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGA                                                           <  SRR4302541.4752032/94‑1 (MQ=60)
                                    GGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGA                                                           >  SRR4302541.4222209/1‑94 (MQ=60)
                                     GATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAG                                                          >  SRR4302541.5916297/1‑94 (MQ=60)
                                     GATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAG                                                          >  SRR4302541.2276381/1‑94 (MQ=60)
                                      ATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGC                                                         <  SRR4302541.5188811/94‑1 (MQ=60)
                                       TTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCT                                                        <  SRR4302541.2329911/94‑1 (MQ=60)
                                        TTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTG                                                       <  SRR4302541.5358212/94‑1 (MQ=60)
                                         TACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGG                                                      <  SRR4302541.6559328/94‑1 (MQ=60)
                                          ACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGG                                                     <  SRR4302541.8443001/94‑1 (MQ=60)
                                          ACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGG                                                     >  SRR4302541.6254247/1‑94 (MQ=60)
                                            GCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTT                                                   <  SRR4302541.2937973/94‑1 (MQ=60)
                                            GCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTT                                                   <  SRR4302541.8527803/94‑1 (MQ=60)
                                             CAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTA                                                  >  SRR4302541.329221/1‑94 (MQ=60)
                                             CAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTA                                                  <  SRR4302541.3145081/94‑1 (MQ=60)
                                             CAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTA                                                  >  SRR4302541.8040093/1‑94 (MQ=60)
                                             CAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTA                                                  >  SRR4302541.5244874/1‑94 (MQ=60)
                                             CAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTA                                                  <  SRR4302541.361375/94‑1 (MQ=60)
                                              CAGGAGTTTCCCGATGAAAACAGGTATGTTTTCCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTAC                                                 <  SRR4302541.7343548/94‑1 (MQ=60)
                                              AAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTAC                                                 <  SRR4302541.3893163/94‑1 (MQ=60)
                                              AAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTAC                                                 >  SRR4302541.8532309/1‑94 (MQ=60)
                                                 GAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGAG                                              >  SRR4302541.5911562/1‑94 (MQ=60)
                                                 GAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGAC                                              >  SRR4302541.3606590/1‑94 (MQ=60)
                                                 GAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGAC                                              >  SRR4302541.6663678/1‑94 (MQ=60)
                                                 GAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGAC                                              <  SRR4302541.1651648/94‑1 (MQ=60)
                                                 GAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGAC                                              >  SRR4302541.2701258/1‑94 (MQ=60)
                                                  AGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACG                                             >  SRR4302541.6698180/1‑94 (MQ=60)
                                                  AGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACG                                             >  SRR4302541.8637971/1‑94 (MQ=60)
                                                  AGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACG                                             <  SRR4302541.7549929/94‑1 (MQ=60)
                                                   GTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGG                                            >  SRR4302541.8784752/1‑94 (MQ=60)
                                                    TTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGC                                           >  SRR4302541.3144218/1‑94 (MQ=60)
                                                    TTACCCGATGAAAACAGGTATGTTTAACTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGC                                           >  SRR4302541.392393/1‑94 (MQ=60)
                                                     TACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCT                                          >  SRR4302541.90956/1‑94 (MQ=60)
                                                     TACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCA                                          >  SRR4302541.6132560/1‑94 (MQ=60)
                                                     TACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCA                                          <  SRR4302541.6678202/94‑1 (MQ=60)
                                                      ACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCAT                                         >  SRR4302541.615575/1‑94 (MQ=60)
                                                       CCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATC                                        >  SRR4302541.6789685/1‑94 (MQ=60)
                                                       CCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATC                                        >  SRR4302541.7130484/1‑94 (MQ=60)
                                                       CCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATC                                        >  SRR4302541.4797488/1‑94 (MQ=60)
                                                       CCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATC                                        >  SRR4302541.603761/1‑94 (MQ=60)
                                                        CCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCG                                       >  SRR4302541.8824751/1‑94 (MQ=60)
                                                        CCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCG                                       <  SRR4302541.4698201/94‑1 (MQ=60)
                                                          GATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAA                                     <  SRR4302541.6312658/94‑1 (MQ=60)
                                                           ATGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAA                                    >  SRR4302541.1844886/1‑94 (MQ=60)
                                                            TGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAT                                   >  SRR4302541.3125372/1‑94 (MQ=60)
                                                            TGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAT                                   <  SRR4302541.4650350/94‑1 (MQ=60)
                                                            TGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAT                                   >  SRR4302541.6116252/1‑94 (MQ=60)
                                                            TGAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAAT                                   <  SRR4302541.3935208/94‑1 (MQ=60)
                                                             GAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATT                                  <  SRR4302541.8020948/94‑1 (MQ=60)
                                                             GAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATT                                  >  SRR4302541.7540046/1‑94 (MQ=60)
                                                             GAAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATT                                  >  SRR4302541.2187810/1‑94 (MQ=60)
                                                              AAAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTT                                 >  SRR4302541.7157500/1‑94 (MQ=60)
                                                               AAACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTG                                >  SRR4302541.3942841/1‑94 (MQ=60)
                                                                AACAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGG                               >  SRR4302541.1283745/1‑94 (MQ=60)
                                                                  CAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGG                             >  SRR4302541.2703044/1‑94 (MQ=60)
                                                                  CAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGG                             >  SRR4302541.3452915/1‑94 (MQ=60)
                                                                  CAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGG                             <  SRR4302541.7997956/94‑1 (MQ=60)
                                                                  CAGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGG                             >  SRR4302541.383254/1‑94 (MQ=60)
                                                                   AGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGC                            <  SRR4302541.6192982/94‑1 (MQ=60)
                                                                   AGGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGC                            <  SRR4302541.212372/94‑1 (MQ=60)
                                                                    GGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCG                           <  SRR4302541.6071816/94‑1 (MQ=60)
                                                                    GGTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCG                           <  SRR4302541.7466959/94‑1 (MQ=60)
                                                                     GTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGG                          >  SRR4302541.6887054/1‑94 (MQ=60)
                                                                     GTATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGG                          >  SRR4302541.7780091/1‑94 (MQ=60)
                                                                      TATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTCCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGC                         >  SRR4302541.6773910/1‑94 (MQ=60)
                                                                       ATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTC                        <  SRR4302541.7980089/94‑1 (MQ=60)
                                                                       ATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTC                        >  SRR4302541.5731244/1‑94 (MQ=60)
                                                                       ATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTC                        <  SRR4302541.7714343/94‑1 (MQ=60)
                                                                       ATGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTA                        <  SRR4302541.7441814/94‑1 (MQ=60)
                                                                       ATGTTGACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTC                        <  SRR4302541.3376240/94‑1 (MQ=60)
                                                                        TGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCG                       >  SRR4302541.2059148/1‑94 (MQ=60)
                                                                        TGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCG                       <  SRR4302541.7493918/94‑1 (MQ=60)
                                                                        TGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCG                       <  SRR4302541.6277272/94‑1 (MQ=60)
                                                                        TGTTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCG                       <  SRR4302541.6325882/94‑1 (MQ=60)
                                                                          TTTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCC                     >  SRR4302541.6586109/1‑94 (MQ=60)
                                                                           TTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCC                    <  SRR4302541.6039083/94‑1 (MQ=60)
                                                                           TTACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCC                    <  SRR4302541.6039084/94‑1 (MQ=60)
                                                                            TACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCG                   >  SRR4302541.8834796/1‑94 (MQ=60)
                                                                            TACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCG                   >  SRR4302541.6487531/1‑94 (MQ=60)
                                                                             ACCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGC                  <  SRR4302541.5634045/94‑1 (MQ=60)
                                                                              CCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTCCGACGGCATCGAAATTTGGGGCGGTCGCCCGCA                 >  SRR4302541.8584905/1‑94 (MQ=60)
                                                                              CCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCC                 >  SRR4302541.2168361/1‑94 (MQ=60)
                                                                              CCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCA                 <  SRR4302541.4786517/94‑1 (MQ=60)
                                                                              CCTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCA                 <  SRR4302541.2359949/94‑1 (MQ=60)
                                                                               CTGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCAC                >  SRR4302541.5220426/1‑94 (MQ=60)
                                                                                TGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACG               <  SRR4302541.6100679/94‑1 (MQ=60)
                                                                                TGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACG               <  SRR4302541.2552168/94‑1 (MQ=60)
                                                                                TGCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACG               <  SRR4302541.8589024/94‑1 (MQ=60)
                                                                                 GCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATTCAAGCGAGCTGGGTTAGGCCGGCGTCGAAATGTGGGGgggcgccccgcccgc              >  SRR4302541.1190950/1‑79 (MQ=60)
                                                                                 GCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGC              >  SRR4302541.5063169/1‑94 (MQ=60)
                                                                                 GCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGC              >  SRR4302541.1190951/1‑94 (MQ=60)
                                                                                 GCGGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGC              <  SRR4302541.1695809/94‑1 (MQ=60)
                                                                                   GGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGT            >  SRR4302541.5960772/1‑94 (MQ=60)
                                                                                   GGCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGT            >  SRR4302541.5518863/1‑94 (MQ=60)
                                                                                    GCCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTT           >  SRR4302541.4745277/1‑94 (MQ=60)
                                                                                     CCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTC          <  SRR4302541.5202228/94‑1 (MQ=60)
                                                                                     CCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTC          <  SRR4302541.6829878/94‑1 (MQ=60)
                                                                                     CCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTC          <  SRR4302541.2403699/94‑1 (MQ=60)
                                                                                     CCACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTC          <  SRR4302541.3629610/94‑1 (MQ=60)
                                                                                      CACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCG         >  SRR4302541.4778831/1‑94 (MQ=60)
                                                                                      CACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCG         <  SRR4302541.7412761/94‑1 (MQ=60)
                                                                                      CACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCG         <  SRR4302541.5590896/94‑1 (MQ=60)
                                                                                       ACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGCTCGC        >  SRR4302541.7848906/1‑94 (MQ=60)
                                                                                        CCAGCAGCTGCGTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCG       <  SRR4302541.7607189/94‑1 (MQ=60)
                                                                                           GCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCG    <  SRR4302541.7119775/94‑1 (MQ=60)
                                                                                           GCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCG    <  SRR4302541.3288500/94‑1 (MQ=60)
                                                                                            CAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGG   <  SRR4302541.811503/94‑1 (MQ=60)
                                                                                            CAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGG   <  SRR4302541.1722560/94‑1 (MQ=60)
                                                                                             AGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGA  >  SRR4302541.4627074/1‑94 (MQ=60)
                                                                                             AGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGA  <  SRR4302541.5476910/94‑1 (MQ=60)
                                                                                             AGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGA  >  SRR4302541.7273269/1‑94 (MQ=60)
                                                                                             AGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGA  >  SRR4302541.6361304/1‑94 (MQ=60)
                                                                                             |                                                                                             
GGAATATTAATCCCTCTCCCGGCCCGGCAACGGGCCGGATTTACGCAAGGAGTTACCCGATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGA  >  NC_000913/3499918‑3500104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑