Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,506,318 (C)5→6 coding (1134/1227 nt) yhfW ← putative mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,506,3131.C99.2% 890.5 / ‑1.6 261coding (1139/1227 nt)yhfWputative mutase
Reads supporting (aligned to +/- strand):  ref base . (2/0);  new base C (109/150);  total (111/150)
Fisher's exact test for biased strand distribution p-value = 1.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 287 total aligned reads displayed.

AAACTCATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGG  >  NC_000913/3506221‑3506400
                                                                                             |                                                                                       
aaaCTCATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAg                                                                                          <  1:1211352/93‑1 (MQ=255)
 aaCTCATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑c                                                                                        >  2:6251287/1‑93 (MQ=255)
      aTAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑cccccc                                                                                   >  1:6179673/1‑92 (MQ=255)
      aTAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑cccccc                                                                                   >  2:7303222/1‑92 (MQ=255)
        aGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑ccccccac                                                                                 <  1:1425957/93‑4 (MQ=255)
         gggTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑ccccccaca                                                                                >  2:8087574/1‑89 (MQ=255)
           gtgtCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATc                                                                               <  1:7555117/93‑1 (MQ=255)
              tctcCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCCCATCAGa                                                                            >  1:8605694/1‑93 (MQ=255)
                   tGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCg                                                                       <  1:3785826/93‑1 (MQ=255)
                    gCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCgt                                                                      <  2:3695303/93‑1 (MQ=255)
                      aaaCCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCgtgg                                                                    <  2:5058280/93‑1 (MQ=255)
                       aaCCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCgtggt                                                                   <  1:2243067/93‑1 (MQ=255)
                       aaCCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCgtggt                                                                   <  2:3165888/93‑1 (MQ=255)
                        aCCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCgtggtg                                                                  <  2:1547886/93‑1 (MQ=255)
                        aCCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCgtggtg                                                                  <  2:6739264/93‑1 (MQ=255)
                           ggagggagGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTgcgc                                                               >  2:3442453/1‑93 (MQ=255)
                             agggaggAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGcac                                                             >  2:2564934/1‑93 (MQ=255)
                               ggaggaAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCacac                                                           >  2:4376293/1‑93 (MQ=255)
                               ggaggaAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACAAGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCacac                                                           >  2:6552380/1‑93 (MQ=255)
                                gaggaAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACAcc                                                          <  2:4721572/93‑1 (MQ=255)
                                 aggaAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCg                                                         <  2:3940620/93‑1 (MQ=255)
                                 aggaAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCg                                                         >  1:1979334/1‑93 (MQ=255)
                                  ggaAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGa                                                        >  1:3926051/1‑93 (MQ=255)
                                  ggaAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGa                                                        >  2:7912755/1‑93 (MQ=255)
                                  ggaAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGa                                                        >  1:1146345/1‑93 (MQ=255)
                                    aaagaaaagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCCCACCGAGc                                                      >  1:7429149/1‑93 (MQ=255)
                                    aaagaaaagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGc                                                      >  1:8811124/1‑93 (MQ=255)
                                    aaagaaaagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGc                                                      <  1:6455752/93‑1 (MQ=255)
                                    aaagaaaagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGc                                                      >  1:3200469/1‑93 (MQ=255)
                                        aaaagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCg                                                  >  1:5940170/1‑93 (MQ=255)
                                         aaagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGt                                                 >  2:336090/1‑93 (MQ=255)
                                          aagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTa                                                >  1:8272214/1‑93 (MQ=255)
                                          aagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTa                                                <  2:3730475/93‑1 (MQ=255)
                                          aagaGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTa                                                <  2:577844/93‑1 (MQ=255)
                                           agagCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAg                                               <  1:5052341/93‑1 (MQ=255)
                                           agagCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAg                                               >  1:7627573/1‑93 (MQ=255)
                                            gagCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGc                                              <  2:5459474/93‑1 (MQ=255)
                                            gagCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGc                                              <  1:4249763/93‑1 (MQ=255)
                                             agCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCg                                             <  1:4510850/93‑1 (MQ=255)
                                              gCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGa                                            <  1:3134654/93‑1 (MQ=255)
                                              gCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGa                                            >  2:1735083/1‑93 (MQ=255)
                                              gCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGa                                            >  1:981224/1‑93 (MQ=255)
                                               cGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGat                                           >  1:8521035/1‑93 (MQ=255)
                                               cGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGat                                           >  1:6272396/1‑93 (MQ=255)
                                               cGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGat                                           <  2:8489386/93‑1 (MQ=255)
                                               cGACCATTTTGTGGCGGGGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGat                                           <  2:8120723/93‑1 (MQ=255)
                                                gACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGatc                                          >  2:1446541/1‑93 (MQ=255)
                                                gACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGatc                                          >  1:7083101/1‑93 (MQ=255)
                                                 aCCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGatca                                         <  1:7907381/93‑1 (MQ=255)
                                                 aCCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGatca                                         >  2:7785975/1‑93 (MQ=255)
                                                  ccATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGatcat                                        >  2:2307991/1‑93 (MQ=255)
                                                    aTTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATcc                                      <  1:1513633/93‑1 (MQ=255)
                                                    aTTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATcc                                      <  1:1724417/93‑1 (MQ=255)
                                                    aTTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATcc                                      >  2:8218807/1‑93 (MQ=255)
                                                    aTTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATcc                                      >  1:7233128/1‑93 (MQ=255)
                                                     ttttGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATccc                                     >  2:86167/1‑93 (MQ=255)
                                                      tttGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCt                                    >  2:207467/1‑93 (MQ=255)
                                                      tttGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCt                                    <  1:1797959/93‑1 (MQ=255)
                                                      tttGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCt                                    <  2:8697941/93‑1 (MQ=255)
                                                      tttGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCt                                    <  2:5704778/93‑1 (MQ=255)
                                                      tttGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCt                                    <  1:6706977/93‑1 (MQ=255)
                                                       ttGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCtt                                   <  2:3327803/93‑1 (MQ=255)
                                                       ttGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCtt                                   <  1:4632486/93‑1 (MQ=255)
                                                        tgtgGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTg                                  >  2:1908758/1‑93 (MQ=255)
                                                         gtggcggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACGTCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGc                                 <  1:5434746/93‑1 (MQ=255)
                                                         gtggcggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGc                                 <  1:2691816/93‑1 (MQ=255)
                                                         gtggcggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGc                                 <  2:6602333/93‑1 (MQ=255)
                                                         gtggcggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGc                                 <  1:5746984/93‑1 (MQ=255)
                                                         gtggcggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGc                                 <  2:250045/93‑1 (MQ=255)
                                                         gtggcggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGc                                 <  1:1020048/93‑1 (MQ=255)
                                                          tggcggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCt                                >  2:6063763/1‑93 (MQ=255)
                                                              ggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGACAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATa                            >  1:1874920/1‑93 (MQ=255)
                                                              ggtggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATa                            <  1:6910196/93‑1 (MQ=255)
                                                                 ggcgCGCGGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAAc                         >  2:1607605/1‑93 (MQ=255)
                                                                     cgcgGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGc                     <  1:8262628/93‑1 (MQ=255)
                                                                      gcgGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCa                    >  2:4534694/1‑93 (MQ=255)
                                                                       cgGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCAc                   <  1:3288819/93‑1 (MQ=255)
                                                                       cgGAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCAc                   <  1:2323844/93‑1 (MQ=255)
                                                                        ggAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACt                  <  2:7646107/93‑1 (MQ=255)
                                                                         gAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTg                 >  2:3478159/1‑93 (MQ=255)
                                                                         gAAAAATTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTg                 >  1:6598264/1‑93 (MQ=255)
                                                                           aaaaTTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGc               <  1:4070635/93‑1 (MQ=255)
                                                                           aaaaTTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGc               >  2:3254559/1‑93 (MQ=255)
                                                                             aaTTCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGcac             <  1:801771/93‑1 (MQ=255)
                                                                               ttCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGcacca           <  2:7184282/93‑1 (MQ=255)
                                                                               tgcacacgCGGTAGCCCCCCTCATCAGAAAGCGTGGTTCGCACACCGAGCTGCGTAGCCATCATCCCGTGCTGATAAACCAGCACTGGcacca           <  1:495506/91‑1 (MQ=255)
                                                                                tCACACACGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGcaccac          <  1:2824567/93‑1 (MQ=255)
                                                                                 cacacaCGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACt         <  1:4771682/93‑1 (MQ=255)
                                                                                 cacacaCGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACt         <  1:5316499/93‑1 (MQ=255)
                                                                                 cacacaCGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACt         <  2:640452/93‑1 (MQ=255)
                                                                                  acacacGGTAGCCCCCCACATGAGAAAGCGTGGTGCGCACGCCGAGCTGCGTAGCGATCAACCCTTGCTGATAAACCAGCACTGGCACCACtt        <  1:8300496/93‑1 (MQ=255)
                                                                                  acacacGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACtt        <  2:2965397/93‑1 (MQ=255)
                                                                                   cacacGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTc       >  1:8660597/1‑93 (MQ=255)
                                                                                   cacacGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTc       >  2:1987085/1‑93 (MQ=255)
                                                                                    acacGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTcg      <  2:2781689/93‑1 (MQ=255)
                                                                                      ccGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTcgcg    <  2:6680480/92‑1 (MQ=255)
                                                                                       cGGTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCgg   <  1:2586636/93‑1 (MQ=255)
                                                                                        ggTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCggg  >  1:4729098/1‑93 (MQ=255)
                                                                                        ggTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCggg  >  2:2240050/1‑93 (MQ=255)
                                                                                        ggTAGCCCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCggg  <  2:5005572/93‑1 (MQ=255)
                                                                                             |                                                                                       
AAACTCATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CCCCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGG  >  NC_000913/3506221‑3506400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGCTG  >  NC_000913/3506225‑3506411
                                                                                               |                                                                                             
TCATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CC‑CCC                                                                                               >  SRR4302541.6246652/1‑94 (MQ=60)
TCATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CC‑CCC                                                                                               >  SRR4302541.8367598/1‑94 (MQ=60)
 CATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CC‑CCCC                                                                                              >  SRR4302541.6242809/1‑94 (MQ=60)
  ATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CC‑CCCca                                                                                             <  SRR4302541.1103583/94‑3 (MQ=60)
   TAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAACAATTCACACACGGTAG‑CCGCCCAC                                                                                             >  SRR4302541.872794/1‑94 (MQ=60)
    AGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACA                                                                                            <  SRR4302541.8389383/94‑1 (MQ=60)
    AGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACA                                                                                            <  SRR4302541.1439835/94‑1 (MQ=60)
     GGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACCCGGTAG‑CC‑CCCcccat                                                                                          >  SRR4302541.2449678/1‑89 (MQ=60)
      GGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATC                                                                                          >  SRR4302541.6828247/1‑94 (MQ=60)
      GGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATC                                                                                          >  SRR4302541.6590222/1‑94 (MQ=60)
      GGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATC                                                                                          <  SRR4302541.4081376/94‑1 (MQ=60)
      GGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATC                                                                                          >  SRR4302541.3018075/1‑94 (MQ=60)
       GTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCA                                                                                         <  SRR4302541.7635861/94‑1 (MQ=60)
       GTGGCCCCTGCAAAACGGAGAGAGGAAAGAAAAGACCGACCATTTTGTGGCCGTGGCGCGCCGAAAAATTCACACACGGTAG‑CC‑CCCcccatca                                                                                        <  SRR4302541.6710861/94‑8 (MQ=60)
        TGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAG                                                                                        >  SRR4302541.6446438/1‑94 (MQ=60)
         GTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCCCATCAGA                                                                                       >  SRR4302541.8698006/1‑94 (MQ=60)
         GTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCCGA                                                                                       >  SRR4302541.8890249/1‑94 (MQ=60)
           CTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACTGTAGCCC‑CCCACATCAGAAA                                                                                     >  SRR4302541.4059527/1‑94 (MQ=60)
              CTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCG                                                                                  <  SRR4302541.7757089/94‑1 (MQ=60)
              CTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCG                                                                                  >  SRR4302541.6144485/1‑94 (MQ=60)
               TGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGT                                                                                 <  SRR4302541.3823864/94‑1 (MQ=60)
                GCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTG                                                                                >  SRR4302541.785848/1‑94 (MQ=60)
                GCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTG                                                                                <  SRR4302541.5083359/94‑1 (MQ=60)
                 CAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGG                                                                               <  SRR4302541.1439031/94‑1 (MQ=60)
                 CAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGG                                                                               <  SRR4302541.8275497/94‑1 (MQ=60)
                 CAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGG                                                                               <  SRR4302541.6743703/94‑1 (MQ=60)
                 CAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGG                                                                               >  SRR4302541.4758089/1‑94 (MQ=60)
                  AAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGT                                                                              >  SRR4302541.5186049/1‑94 (MQ=60)
                  AAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGG                                                                              >  SRR4302541.266199/1‑94 (MQ=60)
                   AACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTG                                                                             <  SRR4302541.2264782/94‑1 (MQ=60)
                   AACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTG                                                                             <  SRR4302541.2286302/94‑1 (MQ=60)
                   AACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTG                                                                             <  SRR4302541.6743144/94‑1 (MQ=60)
                     CCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCG                                                                           <  SRR4302541.4567395/94‑1 (MQ=60)
                     CCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCG                                                                           <  SRR4302541.98670/94‑1 (MQ=60)
                     CCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCG                                                                           <  SRR4302541.2022186/94‑1 (MQ=60)
                     CCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGGAGCCC‑CCCACATCAGAAAGCGTGGTGCG                                                                           >  SRR4302541.2780357/1‑94 (MQ=60)
                       GGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCA                                                                         >  SRR4302541.8633454/1‑94 (MQ=60)
                       GGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCA                                                                         <  SRR4302541.4613058/94‑1 (MQ=60)
                       GGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCA                                                                         >  SRR4302541.834206/1‑94 (MQ=60)
                        GAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCAC                                                                        <  SRR4302541.1877424/94‑1 (MQ=60)
                        GAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGGGGCGCGCGGAAAAATTCACACACGGTAG‑CC‑CCCACATCAGAAAGCGTGGTGCGCACA                                                                       >  SRR4302541.1486212/1‑94 (MQ=60)
                          GGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACAC                                                                      >  SRR4302541.1495215/1‑94 (MQ=60)
                          GGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGAGCGGAAAAATTCACACAAGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACAC                                                                      >  SRR4302541.1419384/1‑94 (MQ=60)
                           GGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACC                                                                     <  SRR4302541.7539005/94‑1 (MQ=60)
                            GAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCG                                                                    >  SRR4302541.1998457/1‑94 (MQ=60)
                            GAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCG                                                                    >  SRR4302541.8354297/1‑94 (MQ=60)
                             AGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCNNAAAGCGTGGTGCGCACACNGA                                                                   >  SRR4302541.316810/1‑94 (MQ=60)
                             AGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGA                                                                   >  SRR4302541.8017192/1‑94 (MQ=60)
                             AGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGA                                                                   >  SRR4302541.3965185/1‑94 (MQ=60)
                             AGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGA                                                                   >  SRR4302541.3225954/1‑94 (MQ=60)
                             AGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGA                                                                   >  SRR4302541.1157263/1‑94 (MQ=60)
                               GAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCCCACCGAGC                                                                 >  SRR4302541.7508574/1‑94 (MQ=60)
                               GAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGC                                                                 >  SRR4302541.3232803/1‑94 (MQ=60)
                               GAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGC                                                                 >  SRR4302541.8905212/1‑94 (MQ=60)
                               GAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGC                                                                 >  SRR4302541.7319887/1‑94 (MQ=60)
                               GAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGC                                                                 >  SRR4302541.2493868/1‑94 (MQ=60)
                               GAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGC                                                                 >  SRR4302541.8038794/1‑94 (MQ=60)
                                AAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCT                                                                <  SRR4302541.8811021/94‑1 (MQ=60)
                                AAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCT                                                                >  SRR4302541.5563555/1‑94 (MQ=60)
                                AAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCT                                                                <  SRR4302541.6521542/94‑1 (MQ=60)
                                AAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCG                                                                >  SRR4302541.2647943/1‑94 (MQ=60)
                                 AAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTG                                                               >  SRR4302541.7682687/1‑94 (MQ=60)
                                   GAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCG                                                             >  SRR4302541.6000695/1‑94 (MQ=60)
                                    AAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGT                                                            >  SRR4302541.7277175/1‑94 (MQ=60)
                                    AAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGT                                                            >  SRR4302541.6587732/1‑94 (MQ=60)
                                     AAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTA                                                           >  SRR4302541.8362231/1‑94 (MQ=60)
                                     AAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTA                                                           >  SRR4302541.3059890/1‑94 (MQ=60)
                                      AAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAG                                                          <  SRR4302541.181715/94‑1 (MQ=60)
                                      AAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAG                                                          <  SRR4302541.6972790/94‑1 (MQ=60)
                                      AAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAG                                                          <  SRR4302541.8340286/94‑1 (MQ=60)
                                      AAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAG                                                          >  SRR4302541.7708977/1‑94 (MQ=60)
                                       AGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACGCCGAGCTGCGTAGC                                                         <  SRR4302541.5629632/94‑1 (MQ=60)
                                       AGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGC                                                         <  SRR4302541.6287146/94‑1 (MQ=60)
                                       AGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGC                                                         <  SRR4302541.5104324/94‑1 (MQ=60)
                                        GAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCG                                                        <  SRR4302541.4292228/94‑1 (MQ=60)
                                         AGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGA                                                       >  SRR4302541.990400/1‑94 (MQ=60)
                                         AGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGA                                                       <  SRR4302541.4556363/94‑1 (MQ=60)
                                         AGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGA                                                       <  SRR4302541.3519597/94‑1 (MQ=60)
                                          GCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGAT                                                      >  SRR4302541.6336438/1‑94 (MQ=60)
                                          GCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGAT                                                      >  SRR4302541.8612736/1‑94 (MQ=60)
                                          GCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGAT                                                      <  SRR4302541.3166332/94‑1 (MQ=60)
                                           CGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATC                                                     <  SRR4302541.8663732/94‑1 (MQ=60)
                                           CGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATC                                                     >  SRR4302541.7158444/1‑94 (MQ=60)
                                             ACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCAT                                                   <  SRR4302541.7251075/94‑1 (MQ=60)
                                             ACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCAT                                                   >  SRR4302541.5963435/1‑94 (MQ=60)
                                             ACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCAT                                                   <  SRR4302541.7994376/94‑1 (MQ=60)
                                              CCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATC                                                  >  SRR4302541.4438703/1‑94 (MQ=60)
                                               CATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCC                                                 >  SRR4302541.7310285/1‑94 (MQ=60)
                                                ATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCC                                                <  SRR4302541.1528706/94‑1 (MQ=60)
                                                ATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCC                                                >  SRR4302541.1170624/1‑94 (MQ=60)
                                                ATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCC                                                <  SRR4302541.1741271/94‑1 (MQ=60)
                                                 TTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCT                                               <  SRR4302541.1984966/94‑1 (MQ=60)
                                                  TTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTT                                              <  SRR4302541.6777768/94‑1 (MQ=60)
                                                  TTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTT                                              <  SRR4302541.1815412/94‑1 (MQ=60)
                                                   TTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTG                                             <  SRR4302541.4679625/94‑1 (MQ=60)
                                                   TTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTG                                             <  SRR4302541.4152774/94‑1 (MQ=60)
                                                   TTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTG                                             <  SRR4302541.4679626/94‑1 (MQ=60)
                                                     GTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACGTCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCT                                           <  SRR4302541.5490512/94‑1 (MQ=60)
                                                     GTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCT                                           <  SRR4302541.5490510/94‑1 (MQ=60)
                                                     GTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCT                                           <  SRR4302541.1029471/94‑1 (MQ=60)
                                                     GTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCT                                           <  SRR4302541.4963395/94‑1 (MQ=60)
                                                     GTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCT                                           <  SRR4302541.2718555/94‑1 (MQ=60)
                                                     GTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCT                                           >  SRR4302541.1801111/1‑94 (MQ=60)
                                                     GTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCT                                           <  SRR4302541.5805510/94‑1 (MQ=60)
                                                      TGGCGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTG                                          >  SRR4302541.3490378/1‑94 (MQ=60)
                                                       GGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGAT                                        >  SRR4302541.4544920/1‑94 (MQ=60)
                                                         CGGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGACAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATA                                       >  SRR4302541.1892953/1‑94 (MQ=60)
                                                          GGTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAA                                      <  SRR4302541.6983938/94‑1 (MQ=60)
                                                           GTGGCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAA                                     <  SRR4302541.537781/94‑1 (MQ=60)
                                                            TGGCGCGCGGAAAAATTCCCACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAAC                                    <  SRR4302541.1774532/94‑1 (MQ=60)
                                                              GCGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCA                                  <  SRR4302541.8717400/94‑1 (MQ=60)
                                                               CGTGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAG                                 <  SRR4302541.4806839/94‑1 (MQ=60)
                                                               CGCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAG                                 <  SRR4302541.7565454/94‑1 (MQ=60)
                                                                GCGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGC                                <  SRR4302541.3856412/94‑1 (MQ=60)
                                                                 CGCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCA                               <  SRR4302541.8352583/94‑1 (MQ=60)
                                                                  GCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCAC                              >  SRR4302541.7037033/1‑94 (MQ=60)
                                                                  GCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCAC                              >  SRR4302541.4132243/1‑94 (MQ=60)
                                                                  GCGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCAC                              <  SRR4302541.5201161/94‑1 (MQ=60)
                                                                   CGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACT                             <  SRR4302541.2346394/94‑1 (MQ=60)
                                                                   CGGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACT                             <  SRR4302541.3321943/94‑1 (MQ=60)
                                                                    GGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCTATCATCCCTTGCTGATAAACCAGCACTG                            >  SRR4302541.5070252/1‑94 (MQ=60)
                                                                    GGAAAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTG                            >  SRR4302541.6665833/1‑94 (MQ=60)
                                                                       AAAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCA                         <  SRR4302541.4110813/94‑1 (MQ=60)
                                                                        AAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCAC                        >  SRR4302541.3277733/1‑94 (MQ=60)
                                                                        AAATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCAC                        <  SRR4302541.2732290/94‑1 (MQ=60)
                                                                         AATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACC                       <  SRR4302541.7692744/94‑1 (MQ=60)
                                                                         AATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACC                       <  SRR4302541.809140/94‑1 (MQ=60)
                                                                         AATTCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACC                       >  SRR4302541.220117/1‑94 (MQ=60)
                                                                           TGCACACGCGGTAGCCC‑CCCTCATCAGAAAGCGTGGTTCGCACACCGAGCTGCGTAGCCATCATCCCGTGCTGATAAACCAGCACTGGCACCAC                     <  SRR4302541.500177/94‑1 (MQ=60)
                                                                           ATCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCAC                     <  SRR4302541.1210549/94‑1 (MQ=60)
                                                                            TCACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACT                    <  SRR4302541.2853055/94‑1 (MQ=60)
                                                                             CACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTT                   <  SRR4302541.5371221/94‑1 (MQ=60)
                                                                             CACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTT                   <  SRR4302541.4820404/94‑1 (MQ=60)
                                                                             CACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTT                   >  SRR4302541.4837257/1‑94 (MQ=60)
                                                                             CACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGGGCGCACCCCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTC                   >  SRR4302541.2962668/1‑94 (MQ=60)
                                                                              ACACACGGTAGCCC‑CCCACATGAGAAAGCGTGGTGCGCACGCCGAGCTGCGTAGCGATCAACCCTTGCTGATAAACCAGCACTGGCACCACTTC                  <  SRR4302541.8390750/94‑1 (MQ=60)
                                                                              ACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTC                  >  SRR4302541.8753294/1‑94 (MQ=60)
                                                                              ACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTC                  <  SRR4302541.891325/94‑1 (MQ=60)
                                                                              ACACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTC                  <  SRR4302541.8533159/94‑1 (MQ=60)
                                                                               caccccgtagcCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCG                 <  SRR4302541.1915717/83‑1 (MQ=60)
                                                                               CACACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCG                 >  SRR4302541.2523949/1‑94 (MQ=60)
                                                                                 CACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCG               <  SRR4302541.4050220/94‑1 (MQ=60)
                                                                                 CACGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCG               <  SRR4302541.2290259/94‑1 (MQ=60)
                                                                                   CGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGG             >  SRR4302541.4777353/1‑94 (MQ=60)
                                                                                   CGGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGG             <  SRR4302541.2612556/94‑1 (MQ=60)
                                                                                    GGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGT            <  SRR4302541.1552827/94‑1 (MQ=60)
                                                                                    GGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGT            >  SRR4302541.73278/1‑94 (MQ=60)
                                                                                    GGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGT            <  SRR4302541.3953191/94‑1 (MQ=60)
                                                                                    GGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGT            <  SRR4302541.7125502/94‑1 (MQ=60)
                                                                                    GGTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGT            <  SRR4302541.6432649/94‑1 (MQ=60)
                                                                                     GTAGCCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTA           >  SRR4302541.857157/1‑94 (MQ=60)
                                                                                      gagcCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTAT          <  SRR4302541.2546416/90‑1 (MQ=60)
                                                                                       agcCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATG         >  SRR4302541.6397541/4‑94 (MQ=60)
                                                                                       agcCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATG         >  SRR4302541.4201837/4‑94 (MQ=60)
                                                                                       agcCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATG         <  SRR4302541.5702873/91‑1 (MQ=60)
                                                                                        gcCC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGG        <  SRR4302541.5765017/92‑1 (MQ=60)
                                                                                        C‑CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGT       <  SRR4302541.1159174/94‑1 (MQ=60)
                                                                                        C‑CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGT       >  SRR4302541.8175345/1‑94 (MQ=60)
                                                                                        C‑CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGT       >  SRR4302541.3118060/1‑94 (MQ=60)
                                                                                        C‑CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGT       >  SRR4302541.3118061/1‑94 (MQ=60)
                                                                                        C‑CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGG       >  SRR4302541.5939627/1‑94 (MQ=60)
                                                                                          CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTG      >  SRR4302541.1602165/1‑94 (MQ=60)
                                                                                          CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTG      >  SRR4302541.1504650/1‑94 (MQ=60)
                                                                                          CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTG      >  SRR4302541.5235436/1‑94 (MQ=60)
                                                                                          CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTG      <  SRR4302541.3469864/94‑1 (MQ=60)
                                                                                          CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTG      <  SRR4302541.7600907/94‑1 (MQ=60)
                                                                                           C‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGG     >  SRR4302541.3273493/1‑94 (MQ=60)
                                                                                           C‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGG     >  SRR4302541.8436568/1‑94 (MQ=60)
                                                                                             CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGC    >  SRR4302541.6426575/1‑94 (MQ=60)
                                                                                             CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGC    >  SRR4302541.6426574/1‑94 (MQ=60)
                                                                                              CCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGCT   >  SRR4302541.5585798/1‑94 (MQ=60)
                                                                                              CCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGCT   >  SRR4302541.48736/1‑94 (MQ=60)
                                                                                              CCACATCAGAAAGCGAGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGCT   >  SRR4302541.4433609/1‑94 (MQ=60)
                                                                                               CACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGCTG  >  SRR4302541.5465914/1‑94 (MQ=60)
                                                                                               CACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGCTG  >  SRR4302541.2726705/1‑94 (MQ=60)
                                                                                               CACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGCTG  >  SRR4302541.3554925/1‑94 (MQ=60)
                                                                                               |                                                                                             
TCATAGGGTGTCTCCTGCAAACCGGAGGGAGGAAAGAAAAGAGCGACCATTTTGTGGCGGTGGCGCGCGGAAAAATTCACACACGGTAG‑CC‑CCCACATCAGAAAGCGTGGTGCGCACACCGAGCTGCGTAGCGATCATCCCTTGCTGATAAACCAGCACTGGCACCACTTCGCGGGTATGGTGGCTG  >  NC_000913/3506225‑3506411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑