Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,522,805	A→G	Y774C (TAC→TGC)	mrcA →	penicillin‑binding protein 1A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,522,805	0	A	G	100.0%	1091.6 / NA	316	Y774C (TAC→TGC)	mrcA	penicillin‑binding protein 1A
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (176/140); total (176/140)

Only 100 of 332 total aligned reads displayed.

TGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTACGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGC  >  NC_000913/3522715‑3522894

tgACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCg                                                                                         <  2:8587298/93‑1 (MQ=255)

 gACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGa                                                                                        >  1:4515616/1‑93 (MQ=255)

 gACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGa                                                                                        >  2:1384200/1‑93 (MQ=255)

 gACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGa                                                                                        >  1:2197464/1‑93 (MQ=255)

  aCCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATCCACCGGCTTGCGGAGCGATTAAAGATCAGATCTCACGTTGCgca                                                                                       >  1:4243080/1‑91 (MQ=255)

  aCCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGaa                                                                                       >  1:69551/1‑93 (MQ=255)

    cTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAgg                                                                                     >  1:877940/1‑93 (MQ=255)

    cTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAgg                                                                                     <  1:3609728/93‑1 (MQ=255)

     tCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAggg                                                                                    >  1:2497107/1‑92 (MQ=255)

     tCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGc                                                                                    >  1:612062/1‑93 (MQ=255)

     tCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGc                                                                                    >  2:3110041/1‑93 (MQ=255)

      cGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCg                                                                                   <  2:6849583/93‑1 (MQ=255)

        gTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGt                                                                                 <  1:6177917/93‑1 (MQ=255)

        gTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGt                                                                                 <  2:5277574/93‑1 (MQ=255)

         tCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTg                                                                                >  1:2673425/1‑93 (MQ=255)

         tCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTg                                                                                <  2:8214702/93‑1 (MQ=255)

           tGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGcc                                                                              >  1:8006773/1‑93 (MQ=255)

            ggATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCa                                                                             >  1:6760913/1‑93 (MQ=255)

            ggATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCa                                                                             >  2:4608501/1‑93 (MQ=255)

             gaatGGGTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCaa                                                                            <  1:2786180/90‑1 (MQ=255)

              aTTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAag                                                                           >  2:4014714/1‑93 (MQ=255)

               ttGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCCGGTTGCGAAGGCGGTGCCAaga                                                                          >  2:3058867/1‑93 (MQ=255)

               ttGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAaga                                                                          >  2:3587486/1‑93 (MQ=255)

               ttGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAaga                                                                          <  1:4823893/93‑1 (MQ=255)

               ttGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAaga                                                                          >  1:4858079/1‑93 (MQ=255)

                tGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAagag                                                                         <  2:2853828/93‑1 (MQ=255)

                tGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAagag                                                                         <  1:3630184/93‑1 (MQ=255)

                    tttGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGcc                                                                     >  1:460440/1‑93 (MQ=255)

                    tttGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGcc                                                                     >  1:1500546/1‑93 (MQ=255)

                     ttGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGccc                                                                    <  2:4122/93‑1 (MQ=255)

                      tgatgaTCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCa                                                                   <  1:2420249/93‑1 (MQ=255)

                      tgatgaTCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCa                                                                   <  2:788344/93‑1 (MQ=255)

                       gatgatCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAg                                                                  >  1:5203876/1‑93 (MQ=255)

                        atgatCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGc                                                                 <  1:4093036/93‑1 (MQ=255)

                        atgatCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGc                                                                 <  2:8666144/93‑1 (MQ=255)

                         tgatCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGcc                                                                <  2:2322825/93‑1 (MQ=255)

                          gatCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCt                                                               <  1:7097890/93‑1 (MQ=255)

                          gatCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCt                                                               <  2:8758283/93‑1 (MQ=255)

                           atCACCGACGTAATCTCGGTCATACAACGGATTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGCTGCCAAGAGGGCCCAGCCtc                                                              >  2:1959632/1‑92 (MQ=255)

                            tCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGc                                                             >  1:6505056/1‑93 (MQ=255)

                             cACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCa                                                            <  2:2695380/93‑1 (MQ=255)

                             cACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCa                                                            <  1:8683196/93‑1 (MQ=255)

                              aCCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCAt                                                           <  2:6511156/93‑1 (MQ=255)

                              aCCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCAt                                                           >  1:1440659/1‑93 (MQ=255)

                                cgtcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATgg                                                         <  2:1446682/93‑1 (MQ=255)

                                cgtcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATgg                                                         >  2:7593573/1‑93 (MQ=255)

                                 gtcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATggg                                                        <  2:8022378/93‑1 (MQ=255)

                                 gtcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATggg                                                        <  1:3822714/93‑1 (MQ=255)

                                  tcgtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGa                                                       >  1:4030788/1‑93 (MQ=255)

                                    gtAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACg                                                     >  1:5855054/1‑93 (MQ=255)

                                     tAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGc                                                    <  2:6204747/93‑1 (MQ=255)

                                     tAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGc                                                    <  1:8188599/93‑1 (MQ=255)

                                       aTCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCtt                                                  <  1:153117/93‑1 (MQ=255)

                                        tctcGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCCta                                                 >  1:5487968/1‑93 (MQ=255)

                                          tcGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTtata                                               <  1:5033686/93‑1 (MQ=255)

                                             ggcATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGCGCCCAGCCGGCATGGGACGCTTATATGa                                            >  1:7796381/3‑93 (MQ=255)

                                              tCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCATGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGaa                                           <  2:5730919/93‑1 (MQ=255)

                                              tCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGaa                                           >  1:6299881/1‑93 (MQ=255)

                                               cATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGaaa                                          <  2:1769931/93‑1 (MQ=255)

                                                aTACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAg                                         >  1:3712616/1‑93 (MQ=255)

                                                 tACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGc                                        <  2:7142891/93‑1 (MQ=255)

                                                 tACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGc                                        >  2:3400417/1‑93 (MQ=255)

                                                  aCAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGcc                                       >  1:184628/1‑93 (MQ=255)

                                                  aCAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGcc                                       >  2:3835883/1‑93 (MQ=255)

                                                   cAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCg                                      >  1:2876199/1‑93 (MQ=255)

                                                     aCGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGACGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGtt                                    >  1:3049680/1‑93 (MQ=255)

                                                     aCGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAACCGtt                                    >  2:6762693/1‑93 (MQ=255)

                                                       ggCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCt                                  >  2:2590895/1‑93 (MQ=255)

                                                        gCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCtt                                 >  2:3310112/1‑93 (MQ=255)

                                                        gCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCtt                                 <  1:4764662/93‑1 (MQ=255)

                                                        gCTTACGGAGCGATTAAAGATCAGATCTCAGGTTGCAAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCtt                                 <  2:1161996/93‑1 (MQ=255)

                                                        gCTCCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCtt                                 <  2:2969114/93‑1 (MQ=255)

                                                         cTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTg                                >  1:8725533/1‑93 (MQ=255)

                                                          ttCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGa                               <  2:5899044/93‑1 (MQ=255)

                                                          ttCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGa                               >  1:6867901/1‑93 (MQ=255)

                                                            ccGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAg                             <  1:7943768/93‑1 (MQ=255)

                                                               gAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGgtg                          >  2:8391806/1‑93 (MQ=255)

                                                               gAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGgtg                          >  1:1113493/1‑93 (MQ=255)

                                                               gAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGgtg                          <  2:1837005/93‑1 (MQ=255)

                                                                 gCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAGGGtgtg                        >  2:7389254/1‑93 (MQ=255)

                                                                 gCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGtgtg                        <  2:781851/93‑1 (MQ=255)

                                                                  cGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGc                       >  1:5674959/1‑93 (MQ=255)

                                                                   gATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGcg                      >  1:7382729/1‑92 (MQ=255)

                                                                   gATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGcc                      <  2:4331883/93‑1 (MQ=255)

                                                                      tAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCggg                   >  2:818242/1‑92 (MQ=255)

                                                                      tAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGa                   <  1:7565697/93‑1 (MQ=255)

                                                                       aaaGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGag                  <  1:5325877/93‑1 (MQ=255)

                                                                        aaGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGagc                 <  2:6359252/93‑1 (MQ=255)

                                                                        aaGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGagc                 >  1:202564/1‑93 (MQ=255)

                                                                          gatcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGagcag               >  2:5086299/1‑93 (MQ=255)

                                                                            tcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGcc             <  1:8418347/93‑1 (MQ=255)

                                                                            tcagatcTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGACGGAGCAGcc             >  2:3202190/1‑93 (MQ=255)

                                                                                 tctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGa        <  2:2063973/93‑1 (MQ=255)

                                                                                  ctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAc       >  2:2357594/1‑93 (MQ=255)

                                                                                  ctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAc       <  2:6049732/93‑1 (MQ=255)

                                                                                  ctcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAc       >  2:4915185/1‑93 (MQ=255)

                                                                                   tcAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcg      >  2:7334750/1‑93 (MQ=255)

                                                                                     aGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgcc    >  2:5480953/1‑93 (MQ=255)

                                                                                      ggTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgccg   >  1:6685420/1‑93 (MQ=255)

                                                                                       gTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAcgccgc  <  1:5922885/93‑1 (MQ=255)

TGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTACGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGC  >  NC_000913/3522715‑3522894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTGTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTACGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCCACC  >  NC_000913/3522712‑3522898

TTGTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTG                                                                                               <  SRR4302541.3562013/94‑1 (MQ=60)

TTGTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTG                                                                                               <  SRR4302541.6539964/94‑1 (MQ=60)

TTGTGACCTCGGTCGGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTG                                                                                               <  SRR4302541.705319/94‑1 (MQ=60)

 TGTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGC                                                                                              >  SRR4302541.1051751/1‑94 (MQ=60)

 TGTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGC                                                                                              >  SRR4302541.8647331/1‑94 (MQ=60)

  GTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCG                                                                                             <  SRR4302541.5905873/94‑1 (MQ=60)

  GTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCG                                                                                             <  SRR4302541.4942841/94‑1 (MQ=60)

   TGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGA                                                                                            >  SRR4302541.2218726/1‑94 (MQ=60)

   TGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGA                                                                                            >  SRR4302541.4561179/1‑94 (MQ=60)

    GACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAA                                                                                           >  SRR4302541.4285438/1‑94 (MQ=60)

    GACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAA                                                                                           >  SRR4302541.4881355/1‑94 (MQ=60)

    GACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAA                                                                                           >  SRR4302541.70129/1‑94 (MQ=60)

     ACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAG                                                                                          >  SRR4302541.1874516/1‑94 (MQ=60)

      CCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGACGG                                                                                         >  SRR4302541.4647915/1‑94 (MQ=60)

      CCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGG                                                                                         >  SRR4302541.885959/1‑94 (MQ=60)

      CCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGG                                                                                         >  SRR4302541.1383284/1‑94 (MQ=60)

       CTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGG                                                                                        >  SRR4302541.2522315/1‑94 (MQ=60)

       CTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGC                                                                                        >  SRR4302541.617810/1‑94 (MQ=60)

       CTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGC                                                                                        <  SRR4302541.3646327/94‑1 (MQ=60)

        TCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCG                                                                                       >  SRR4302541.5627923/1‑94 (MQ=60)

        TCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCG                                                                                       <  SRR4302541.3182230/94‑1 (MQ=60)

         CGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGG                                                                                      >  SRR4302541.803909/1‑94 (MQ=60)

          GGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGT                                                                                     <  SRR4302541.3848926/94‑1 (MQ=60)

          GGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGT                                                                                     >  SRR4302541.4789069/1‑94 (MQ=60)

          GGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGT                                                                                     <  SRR4302541.2296547/94‑1 (MQ=60)

           GTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTG                                                                                    >  SRR4302541.2699988/1‑94 (MQ=60)

           GTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTG                                                                                    >  SRR4302541.4077904/1‑94 (MQ=60)

           GTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTG                                                                                    <  SRR4302541.6241034/94‑1 (MQ=60)

            TCTGGATTGGCTTTGATGATTACCGTCGTAATCTCGGCCATACAACGGCTTCCGGGGCGATAAAAAACCAGATCTCAGGATGCGAAGGCGGTGC                                                                                   >  SRR4302541.3347966/1‑94 (MQ=60)

             CTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCC                                                                                  >  SRR4302541.8094848/1‑94 (MQ=60)

              TGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCA                                                                                 >  SRR4302541.6833211/1‑94 (MQ=60)

              TGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCA                                                                                 <  SRR4302541.1504637/94‑1 (MQ=60)

              TGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCA                                                                                 >  SRR4302541.2463644/1‑94 (MQ=60)

               GGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAA                                                                                <  SRR4302541.2321715/94‑1 (MQ=60)

                gagtggtgttgaaGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAAATCAGATCTCAGGTTGCGAAGGCGGTGCCAAG                                                                               <  SRR4302541.6005356/81‑1 (MQ=60)

                GATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAG                                                                               >  SRR4302541.2503500/1‑94 (MQ=60)

                GATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAG                                                                               <  SRR4302541.8179700/94‑1 (MQ=60)

                GATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAG                                                                               <  SRR4302541.6005355/94‑1 (MQ=60)

                GAATGGGTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAG                                                                               <  SRR4302541.2814284/94‑1 (MQ=60)

                 ATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGA                                                                              >  SRR4302541.3768842/1‑94 (MQ=60)

                 ATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGA                                                                              >  SRR4302541.4907619/1‑94 (MQ=60)

                  TTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAG                                                                             <  SRR4302541.4873062/94‑1 (MQ=60)

                  TTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAG                                                                             <  SRR4302541.7306212/94‑1 (MQ=60)

                  TTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGCGCCAAGAG                                                                             >  SRR4302541.8349127/1‑94 (MQ=60)

                   TGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGT                                                                            <  SRR4302541.3666986/94‑1 (MQ=60)

                   TGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGT                                                                            <  SRR4302541.3664730/94‑1 (MQ=60)

                   TGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGT                                                                            <  SRR4302541.277013/94‑1 (MQ=60)

                    GGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTG                                                                           <  SRR4302541.7758283/94‑1 (MQ=60)

                      CTTTGATGATCACCGTCGTAATTTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCC                                                                         >  SRR4302541.7173907/1‑94 (MQ=60)

                      CTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCC                                                                         >  SRR4302541.464819/1‑94 (MQ=60)

                      CTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCC                                                                         <  SRR4302541.5940775/94‑1 (MQ=60)

                      CTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCC                                                                         >  SRR4302541.1515396/1‑94 (MQ=60)

                      CTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCC                                                                         >  SRR4302541.8227906/1‑94 (MQ=60)

                      CTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCC                                                                         <  SRR4302541.2063918/94‑1 (MQ=60)

                      CTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCC                                                                         <  SRR4302541.8034907/94‑1 (MQ=60)

                      CTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCC                                                                         <  SRR4302541.7891753/94‑1 (MQ=60)

                         TGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAG                                                                      <  SRR4302541.2444122/94‑1 (MQ=60)

                         TGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAG                                                                      >  SRR4302541.5257477/1‑94 (MQ=60)

                          GATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGC                                                                     >  SRR4302541.5533183/1‑94 (MQ=60)

                           ATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCC                                                                    <  SRR4302541.2754350/94‑1 (MQ=60)

                           ATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCC                                                                    <  SRR4302541.4133441/94‑1 (MQ=60)

                           ATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCC                                                                    <  SRR4302541.5380364/94‑1 (MQ=60)

                            TGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCT                                                                   <  SRR4302541.3969342/94‑1 (MQ=60)

                            TGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCT                                                                   <  SRR4302541.3077151/94‑1 (MQ=60)

                             GTTCACTGTCGCAATCTCGGTCATACAACGTCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTG                                                                  >  SRR4302541.7920491/1‑94 (MQ=60)

                             GATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTG                                                                  >  SRR4302541.5345002/1‑94 (MQ=60)

                             GATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTG                                                                  <  SRR4302541.7173415/94‑1 (MQ=60)

                              ATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGC                                                                 >  SRR4302541.6571409/1‑94 (MQ=60)

                                CACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCAT                                                               >  SRR4302541.1454675/1‑94 (MQ=60)

                                CACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCAT                                                               <  SRR4302541.8776108/94‑1 (MQ=60)

                                 ACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATG                                                              >  SRR4302541.6991650/1‑94 (MQ=60)

                                  CCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGG                                                             >  SRR4302541.3625401/1‑94 (MQ=60)

                                   CGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGG                                                            >  SRR4302541.6756636/1‑94 (MQ=60)

                                   CGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGGGCCCAGCCTGCATGGG                                                            >  SRR4302541.5813822/1‑94 (MQ=60)

                                    GTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGA                                                           <  SRR4302541.3861223/94‑1 (MQ=60)

                                    GTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGA                                                           >  SRR4302541.7550528/1‑94 (MQ=60)

                                    GTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGA                                                           <  SRR4302541.6918770/94‑1 (MQ=60)

                                    GTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGA                                                           >  SRR4302541.4070603/1‑94 (MQ=60)

                                    GTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGA                                                           >  SRR4302541.4579623/1‑94 (MQ=60)

                                      CGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACG                                                         <  SRR4302541.215494/94‑1 (MQ=60)

                                      CGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACG                                                         >  SRR4302541.5914592/1‑94 (MQ=60)

                                       GTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGC                                                        >  SRR4302541.6496499/1‑94 (MQ=60)

                                       GTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGGGCCAAGAGTGCCCAGCCTGCATGGGCCGC                                                        >  SRR4302541.6496498/1‑94 (MQ=60)

                                        TAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCT                                                       <  SRR4302541.8277987/94‑1 (MQ=60)

                                        TAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCT                                                       <  SRR4302541.6081859/94‑1 (MQ=60)

                                         AATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTT                                                      >  SRR4302541.8685508/1‑94 (MQ=60)

                                          ATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTA                                                     <  SRR4302541.154266/94‑1 (MQ=60)

                                          ATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTA                                                     >  SRR4302541.5544488/1‑94 (MQ=60)

                                          ATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTA                                                     <  SRR4302541.2814612/94‑1 (MQ=60)

                                          ATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTA                                                     >  SRR4302541.6562213/1‑94 (MQ=60)

                                          ATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTA                                                     >  SRR4302541.4938475/1‑94 (MQ=60)

                                          ATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCCTA                                                     >  SRR4302541.5544214/1‑94 (MQ=60)

                                            CTCCGTCATACAACGGGTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCG‑AGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATAT                                                  <  SRR4302541.6957601/94‑1 (MQ=60)

                                             TCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATAT                                                  <  SRR4302541.5085467/94‑1 (MQ=60)

                                               GGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGA                                                <  SRR4302541.8763363/94‑1 (MQ=60)

                                               GGGCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGCGCCCAGCCGGCATGGGACGCTTATATGA                                                >  SRR4302541.7880126/1‑94 (MQ=60)

                                                GTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAA                                               >  SRR4302541.8850380/1‑94 (MQ=60)

                                                GTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAA                                               >  SRR4302541.6364274/1‑94 (MQ=60)

                                                  CATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAG                                             <  SRR4302541.8868681/94‑1 (MQ=60)

                                                  CATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAG                                             >  SRR4302541.3750074/1‑94 (MQ=60)

                                                    TACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCC                                           >  SRR4302541.186013/1‑94 (MQ=60)

                                                    TACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCC                                           >  SRR4302541.2792857/1‑94 (MQ=60)

                                                     ACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCG                                          >  SRR4302541.2905059/1‑94 (MQ=60)

                                                      CAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGT                                         <  SRR4302541.6220594/94‑1 (MQ=60)

                                                       AACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGACGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTT                                        >  SRR4302541.3080536/1‑94 (MQ=60)

                                                        ACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTC                                       <  SRR4302541.3649873/94‑1 (MQ=60)

                                                         CGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCT                                      <  SRR4302541.410289/94‑1 (MQ=60)

                                                          GGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTT                                     >  SRR4302541.6198419/1‑94 (MQ=60)

                                                           GCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTG                                    >  SRR4302541.8818826/1‑94 (MQ=60)

                                                           GCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTG                                    <  SRR4302541.8828760/94‑1 (MQ=60)

                                                           GCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTG                                    <  SRR4302541.4813320/94‑1 (MQ=60)

                                                            CTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGA                                   >  SRR4302541.66366/1‑94 (MQ=60)

                                                            CTTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGA                                   >  SRR4302541.6941265/1‑94 (MQ=60)

                                                             TTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAA                                  <  SRR4302541.1605918/94‑1 (MQ=60)

                                                             TTCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAA                                  >  SRR4302541.2015386/1‑94 (MQ=60)

                                                              TCCGGAGCGATTAACGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCGAGCCTGCATGGGACGCTTATATGAAAGACGTTGTTGAAG                                 >  SRR4302541.3680112/1‑94 (MQ=60)

                                                              TCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAG                                 >  SRR4302541.8799497/1‑94 (MQ=60)

                                                              TCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAG                                 <  SRR4302541.259543/94‑1 (MQ=60)

                                                              TCCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAG                                 >  SRR4302541.8282045/1‑94 (MQ=60)

                                                               CCGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGG                                <  SRR4302541.8031266/94‑1 (MQ=60)

                                                                CGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGT                               <  SRR4302541.3707847/94‑1 (MQ=60)

                                                                CGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGT                               >  SRR4302541.4817216/1‑94 (MQ=60)

                                                                CGGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGT                               >  SRR4302541.5856004/1‑94 (MQ=60)

                                                                 GGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTG                              >  SRR4302541.6342732/1‑94 (MQ=60)

                                                                 GGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTG                              >  SRR4302541.6342729/1‑94 (MQ=60)

                                                                 GGAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTG                              >  SRR4302541.1123950/1‑94 (MQ=60)

                                                                  GAGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGT                             <  SRR4302541.1531910/94‑1 (MQ=60)

                                                                   AGCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTG                            <  SRR4302541.518781/94‑1 (MQ=60)

                                                                    GCGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGC                           >  SRR4302541.5732869/1‑94 (MQ=60)

                                                                     CGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCG                          >  SRR4302541.7461659/1‑94 (MQ=60)

                                                                     CGATTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCC                          >  SRR4302541.1255437/1‑94 (MQ=60)

                                                                        TTAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGAGTTCCGGA                       >  SRR4302541.1757953/1‑94 (MQ=60)

                                                                         TAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAG                      <  SRR4302541.7646552/94‑1 (MQ=60)

                                                                         TAAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAG                      <  SRR4302541.7646550/94‑1 (MQ=60)

                                                                          AAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGC                     <  SRR4302541.2374367/94‑1 (MQ=60)

                                                                          AAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGC                     >  SRR4302541.204084/1‑94 (MQ=60)

                                                                          AAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGC                     >  SRR4302541.447128/1‑94 (MQ=60)

                                                                          AAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGC                     <  SRR4302541.5380679/94‑1 (MQ=60)

                                                                          AAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGC                     <  SRR4302541.751367/94‑1 (MQ=60)

                                                                          AAAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGAAGCTTATATGAAAGACGTTCTTGAAGGTGTGCCGGAGC                     <  SRR4302541.4215655/94‑1 (MQ=60)

                                                                           AAGATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCA                    <  SRR4302541.3878197/94‑1 (MQ=60)

                                                                             GATCAGATCTCAGGTTGCGATGGCGGTGCCTAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCTTCCTCGAAGGTGTGCCGGAGCAGC                  >  SRR4302541.7915035/1‑94 (MQ=60)

                                                                             GATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGC                  >  SRR4302541.259900/1‑94 (MQ=60)

                                                                             GATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGC                  >  SRR4302541.5992107/1‑94 (MQ=60)

                                                                              ATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCC                 <  SRR4302541.1635053/94‑1 (MQ=60)

                                                                              ATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCC                 >  SRR4302541.7035467/1‑94 (MQ=60)

                                                                              ATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCC                 <  SRR4302541.4757232/94‑1 (MQ=60)

                                                                              ATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCC                 >  SRR4302541.47052/1‑94 (MQ=60)

                                                                              ATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCC                 <  SRR4302541.552870/94‑1 (MQ=60)

                                                                              ATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCC                 <  SRR4302541.4222070/94‑1 (MQ=60)

                                                                              ATCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCC                 >  SRR4302541.6732683/1‑94 (MQ=60)

                                                                               TCAGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCG                <  SRR4302541.8509360/94‑1 (MQ=60)

                                                                                 AGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGACAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCT              >  SRR4302541.3047752/1‑94 (MQ=60)

                                                                                 AGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCT              >  SRR4302541.5090717/1‑94 (MQ=60)

                                                                                 AGATCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCT              >  SRR4302541.7128912/1‑94 (MQ=60)

                                                                                    TCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAC           >  SRR4302541.7323221/1‑94 (MQ=60)

                                                                                    TCTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGAC           <  SRR4302541.8390499/94‑1 (MQ=60)

                                                                                     CTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACG          >  SRR4302541.5698021/1‑94 (MQ=60)

                                                                                     CTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACG          <  SRR4302541.4972428/94‑1 (MQ=60)

                                                                                     CTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACG          >  SRR4302541.4854522/1‑94 (MQ=60)

                                                                                     CTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACG          >  SRR4302541.4288190/1‑94 (MQ=60)

                                                                                     CTCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACG          <  SRR4302541.3806609/94‑1 (MQ=60)

                                                                                      TCAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGC         <  SRR4302541.8794700/94‑1 (MQ=60)

                                                                                       CAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCC        <  SRR4302541.6809812/94‑1 (MQ=60)

                                                                                       CAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCC        <  SRR4302541.689228/94‑1 (MQ=60)

                                                                                       CAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCC        >  SRR4302541.1489386/1‑94 (MQ=60)

                                                                                       CAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCC        <  SRR4302541.4887664/94‑1 (MQ=60)

                                                                                       CAGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCC        >  SRR4302541.2867528/1‑94 (MQ=60)

                                                                                        AGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCG       >  SRR4302541.6754690/1‑94 (MQ=60)

                                                                                        AGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCG       >  SRR4302541.5064367/1‑94 (MQ=60)

                                                                                        AGGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCG       <  SRR4302541.691719/94‑1 (MQ=60)

                                                                                         GGTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGC      >  SRR4302541.1523123/1‑94 (MQ=60)

                                                                                          GTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCC     <  SRR4302541.5983191/94‑1 (MQ=60)

                                                                                          GTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCC     <  SRR4302541.5982936/94‑1 (MQ=60)

                                                                                          GTTGCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCC     <  SRR4302541.3088941/94‑1 (MQ=60)

                                                                                             GCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCCACC  <  SRR4302541.4812918/94‑1 (MQ=60)

                                                                                             GCGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTAGATGAAATCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCCACC  <  SRR4302541.18805/94‑1 (MQ=60)

TTGTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTACGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCCACC  >  NC_000913/3522712‑3522898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`