Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,542,788	A→G	S107G (AGC→GGC)	yhgH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,542,788	0	A	G	100.0%	1197.4 / NA	350	S107G (AGC→GGC)	yhgH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (165/185); total (165/185)

Only 100 of 363 total aligned reads displayed.

GGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG  >  NC_000913/3542699‑3542877

   aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc                                                                                     <  2:6855915/93‑1 (MQ=255)

   aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc                                                                                     >  2:3785219/1‑93 (MQ=255)

    aaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCt                                                                                    <  2:177144/93‑1 (MQ=255)

     aGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTg                                                                                   >  1:5820870/1‑93 (MQ=255)

     aGACTGGTCACGGTTGCCGACTATGCGCCGCCGTGAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTg                                                                                   >  2:5501496/1‑93 (MQ=255)

      gACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGt                                                                                  >  1:8631253/1‑93 (MQ=255)

      gACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGt                                                                                  >  1:3830909/1‑93 (MQ=255)

       aCTGTTCACGTTTTCCGCCTATCCTCCGCCGTCAAGTCCCCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTc                                                                                 <  1:1189313/93‑1 (MQ=255)

        cTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCa                                                                                >  2:8134196/1‑93 (MQ=255)

          ggTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACg                                                                              >  1:1612629/1‑93 (MQ=255)

           gTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGt                                                                             <  1:5589403/93‑1 (MQ=255)

            tCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTc                                                                            >  2:3035362/1‑93 (MQ=255)

             cACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCt                                                                           <  2:7115108/93‑1 (MQ=255)

               cGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGt                                                                         >  1:1126281/1‑93 (MQ=255)

                 gTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTa                                                                       >  1:7540810/1‑93 (MQ=255)

                 gTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTa                                                                       <  2:5308792/93‑1 (MQ=255)

                  ttGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTAc                                                                      <  2:6230062/93‑1 (MQ=255)

                  ttGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTAc                                                                      <  2:2301179/93‑1 (MQ=255)

                    gCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTa                                                                    <  1:622917/93‑1 (MQ=255)

                    gCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTa                                                                    <  2:8617477/93‑1 (MQ=255)

                     ccGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTAt                                                                   <  2:1485317/93‑1 (MQ=255)

                      cGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTact                                                                  >  1:3282210/1‑91 (MQ=255)

                      cGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTAtt                                                                  <  2:3910444/93‑1 (MQ=255)

                      cGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTAtt                                                                  >  1:7762330/1‑93 (MQ=255)

                      cGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTAtt                                                                  >  1:950687/1‑93 (MQ=255)

                       gACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTg                                                                 >  1:2310501/1‑93 (MQ=255)

                       gACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTg                                                                 <  1:366752/93‑1 (MQ=255)

                        aCTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTgg                                                                >  2:7253874/1‑93 (MQ=255)

                         cTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGa                                                               <  2:6387292/93‑1 (MQ=255)

                             gcgcCGCCGTTAAGTCCGCTTATACACCAGCTTAAATTTTCCCGGCGCAGTTAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTc                                                           <  1:5467375/93‑1 (MQ=255)

                               gccgccGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCtt                                                         <  2:4388480/93‑1 (MQ=255)

                                  gccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTaca                                                      <  1:3861575/93‑1 (MQ=255)

                                   ccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTacac                                                     >  2:4487371/1‑93 (MQ=255)

                                   ccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTacac                                                     >  1:6293717/1‑93 (MQ=255)

                                   ccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTacac                                                     <  2:3271641/93‑1 (MQ=255)

                                   ccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTacac                                                     <  1:2445419/93‑1 (MQ=255)

                                     gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc                                                   <  2:1353921/93‑1 (MQ=255)

                                     gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc                                                   >  2:876206/1‑93 (MQ=255)

                                     gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc                                                   >  2:85452/1‑93 (MQ=255)

                                      ttAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCt                                                  <  1:3606366/93‑1 (MQ=255)

                                      ttAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCt                                                  <  2:567748/93‑1 (MQ=255)

                                      ttAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCt                                                  <  1:5154305/93‑1 (MQ=255)

                                      ttAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCt                                                  <  2:1917163/93‑1 (MQ=255)

                                        aaGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtcg                                                >  1:2560864/1‑93 (MQ=255)

                                            ccGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGc                                            >  1:3454546/1‑93 (MQ=255)

                                             cGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGca                                           >  2:6444196/1‑93 (MQ=255)

                                               cTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacc                                         <  2:234476/93‑1 (MQ=255)

                                                ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTTACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacca                                        >  1:8036186/1‑93 (MQ=255)

                                                ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcaccc                                        >  2:2113665/1‑92 (MQ=255)

                                                ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacca                                        >  2:2900337/1‑93 (MQ=255)

                                                 tATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcaccac                                       <  1:6821597/93‑1 (MQ=255)

                                                  aTCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCaccacc                                      >  2:7416201/1‑93 (MQ=255)

                                                  aTCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCaccacc                                      <  2:4941615/93‑1 (MQ=255)

                                                   tCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCg                                     <  1:6592966/93‑1 (MQ=255)

                                                   tCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCg                                     <  2:4793876/93‑1 (MQ=255)

                                                    ccaccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCgg                                    <  1:4282816/93‑1 (MQ=255)

                                                      accaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGt                                  >  2:8310390/1‑93 (MQ=255)

                                                      accaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGt                                  >  2:7556631/1‑93 (MQ=255)

                                                      accaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGCGt                                  >  1:5372175/1‑93 (MQ=255)

                                                       ccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGtt                                 <  1:4434799/93‑1 (MQ=255)

                                                       ccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGtt                                 <  1:1755755/93‑1 (MQ=255)

                                                        caGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTg                                >  1:5938062/1‑93 (MQ=255)

                                                        caGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTg                                <  1:4997460/93‑1 (MQ=255)

                                                         cgCTTAAAGTCTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCCCGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGc                               <  2:4282157/92‑1 (MQ=255)

                                                          gCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCa                              <  1:7230225/93‑1 (MQ=255)

                                                          gCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCa                              >  1:2811778/1‑93 (MQ=255)

                                                            ttAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAAt                            <  1:4780668/93‑1 (MQ=255)

                                                             tAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGGCTTACACGCTCGTCGCACCTCCGGGTGGCAAtt                           <  2:8079075/93‑1 (MQ=255)

                                                              aaaTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTg                          <  1:7709061/93‑1 (MQ=255)

                                                              aaaTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTg                          <  1:6731108/93‑1 (MQ=255)

                                                                aTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGcc                        <  1:2619916/93‑1 (MQ=255)

                                                                 ttttCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCg                       >  1:6055315/1‑93 (MQ=255)

                                                                   ttCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGa                     <  1:1931649/93‑1 (MQ=255)

                                                                   ttCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGa                     <  1:8400388/93‑1 (MQ=255)

                                                                    tCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTCCTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGAt                    <  2:7833425/93‑1 (MQ=255)

                                                                    tCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGAt                    >  2:5784693/1‑93 (MQ=255)

                                                                     cccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATc                   <  2:2444653/93‑1 (MQ=255)

                                                                     cccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATc                   <  2:1582293/93‑1 (MQ=255)

                                                                      ccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCg                  >  2:666674/1‑93 (MQ=255)

                                                                          cgcAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATc              <  2:4039951/93‑1 (MQ=255)

                                                                           gcAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCg             >  1:4582094/1‑93 (MQ=255)

                                                                           gcAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCg             <  1:4607813/93‑1 (MQ=255)

                                                                            cAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGt            >  1:3038456/1‑93 (MQ=255)

                                                                            cAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGt            >  2:5038021/1‑93 (MQ=255)

                                                                            cAGGGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTTGCACCACCCGGTTGCCATTGCCGGGTTGCATCGt            >  2:2652432/1‑93 (MQ=255)

                                                                             aGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTc           <  1:8240131/93‑1 (MQ=255)

                                                                             aGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGCTGCAATTGCCGGATCGCATCGTc           >  2:5984434/1‑93 (MQ=255)

                                                                              gTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCa          >  2:2733578/1‑93 (MQ=255)

                                                                              gTGAAATCGCCAGCGCCCTGTCACGTCTGTTTCTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGAAATTGCCGGATCGCATCGTCa          <  1:1521735/93‑1 (MQ=255)

                                                                               tGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCGCCGGGTTGCAATTGCCGGATCGCATCGTCAg         <  1:3958318/93‑1 (MQ=255)

                                                                                gAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGGACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGc        <  2:4649737/93‑1 (MQ=255)

                                                                                gAAATCGCCGACGCCCTGACACAACTGTAACTATTAGAAGAATAACAAACTCGTCGCACCGCCGGAATGCAATTGCCGGATCGCATCATCAGc        <  1:7824361/93‑1 (MQ=255)

                                                                                 aaaTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCg       >  1:6420143/1‑93 (MQ=255)

                                                                                 aaaTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTAGTAGCACCACCCGGTTGCAATTGCCGGATCGCATCGTCAGCg       >  2:1075094/1‑93 (MQ=255)

                                                                                  aaTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGt      >  1:4208222/1‑93 (MQ=255)

                                                                                  aaTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGt      <  1:2106552/93‑1 (MQ=255)

                                                                                  aaTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGGTGCAATTGCCGGATCGCATCGTCAGCGt      >  1:3189829/1‑93 (MQ=255)

                                                                                    tCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTc    >  1:7475442/1‑93 (MQ=255)

                                                                                    acGCCGGCGCCCTGTCACGTATGTTACTAGTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTc    <  2:6330706/92‑1 (MQ=255)

                                                                                     cGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTcc   <  2:697939/93‑1 (MQ=255)

GGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG  >  NC_000913/3542699‑3542877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.

CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTAT  >  NC_000913/3542695‑3542881

CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCG                                                                                               <  SRR4302541.3053757/94‑1 (MQ=60)

CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCG                                                                                               <  SRR4302541.8513877/94‑1 (MQ=60)

CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCG                                                                                               <  SRR4302541.8513876/94‑1 (MQ=60)

CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCG                                                                                               <  SRR4302541.4188917/94‑1 (MQ=60)

CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCG                                                                                               <  SRR4302541.5213463/94‑1 (MQ=60)

 CCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGG                                                                                              <  SRR4302541.6710492/94‑1 (MQ=60)

  CTGGCAGAGACGTGTCAGGGGTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGC                                                                                             <  SRR4302541.2487776/94‑1 (MQ=60)

    GGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGC                                                                                           >  SRR4302541.7789100/1‑94 (MQ=60)

      CAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCC                                                                                         >  SRR4302541.4801922/1‑94 (MQ=60)

      CAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCC                                                                                         >  SRR4302541.408880/1‑94 (MQ=60)

      CAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCCGCGCCC                                                                                         >  SRR4302541.1674831/1‑94 (MQ=60)

       AAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCT                                                                                        >  SRR4302541.7088290/1‑94 (MQ=60)

       AAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCT                                                                                        >  SRR4302541.5002270/1‑94 (MQ=60)

        AAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTG                                                                                       >  SRR4302541.5880037/1‑94 (MQ=60)

        AAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTG                                                                                       >  SRR4302541.8062848/1‑94 (MQ=60)

         AGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGT                                                                                      >  SRR4302541.4308146/1‑94 (MQ=60)

         AGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGT                                                                                      >  SRR4302541.3869506/1‑94 (MQ=60)

         AGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGT                                                                                      >  SRR4302541.8723741/1‑94 (MQ=60)

         AGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGT                                                                                      >  SRR4302541.1164095/1‑94 (MQ=60)

         AGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGT                                                                                      >  SRR4302541.1938156/1‑94 (MQ=60)

          GACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTC                                                                                     >  SRR4302541.3613015/1‑94 (MQ=60)

          GACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTC                                                                                     >  SRR4302541.5561764/1‑94 (MQ=60)

          GACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTC                                                                                     >  SRR4302541.849810/1‑94 (MQ=60)

           actgttcacgttttccgcctatcctCCGCCGTCAAGTCCCCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCA                                                                                    <  SRR4302541.1200820/69‑1 (MQ=60)

           ACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCA                                                                                    >  SRR4302541.2126295/1‑94 (MQ=60)

            CTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCAC                                                                                   >  SRR4302541.8015767/1‑94 (MQ=60)

            CTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCAC                                                                                   <  SRR4302541.5423212/94‑1 (MQ=60)

             TGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACG                                                                                  >  SRR4302541.1628649/1‑94 (MQ=60)

              GGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGT                                                                                 >  SRR4302541.8859165/1‑94 (MQ=60)

              GGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGT                                                                                 <  SRR4302541.3828534/94‑1 (MQ=60)

               GTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTC                                                                                <  SRR4302541.5646619/94‑1 (MQ=60)

               GTCACGGTTGCCGACTATGCGCCGCCGGTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTC                                                                                <  SRR4302541.604861/94‑1 (MQ=60)

                 CACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTG                                                                              >  SRR4302541.8505143/1‑94 (MQ=60)

                  ACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGT                                                                             >  SRR4302541.8421696/1‑94 (MQ=60)

                  ACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGT                                                                             >  SRR4302541.1136911/1‑94 (MQ=60)

                  ACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGT                                                                             <  SRR4302541.1358526/94‑1 (MQ=60)

                   CGGTTGCCGACTACGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTT                                                                            <  SRR4302541.1437931/94‑1 (MQ=60)

                    GGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTA                                                                           >  SRR4302541.7621408/1‑94 (MQ=60)

                    GGTTGCCGACTATGCGCCGCCGTTAAGCCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTA                                                                           <  SRR4302541.7804589/94‑1 (MQ=60)

                      TTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACT                                                                         <  SRR4302541.3468418/94‑1 (MQ=60)

                        GCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTAT                                                                       <  SRR4302541.628763/94‑1 (MQ=60)

                        GCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTAT                                                                       >  SRR4302541.516543/1‑94 (MQ=60)

                         CCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATT                                                                      >  SRR4302541.959704/1‑94 (MQ=60)

                         CCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATT                                                                      >  SRR4302541.7844913/1‑94 (MQ=60)

                         CCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATT                                                                      >  SRR4302541.2281321/1‑94 (MQ=60)

                         CCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTACT                                                                      >  SRR4302541.3315291/1‑94 (MQ=60)

                          CGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTG                                                                     >  SRR4302541.2332919/1‑94 (MQ=60)

                          CGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTG                                                                     <  SRR4302541.763482/94‑1 (MQ=60)

                          CGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTG                                                                     >  SRR4302541.1837769/1‑94 (MQ=60)

                           GACTATGCGCCGCCGTTAAGTCCGCTTCACCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCCGTCACGTCTGTTACTATTGG                                                                    <  SRR4302541.2138186/94‑1 (MQ=60)

                           GACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGG                                                                    <  SRR4302541.2197278/94‑1 (MQ=60)

                           GACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGG                                                                    <  SRR4302541.370096/94‑1 (MQ=60)

                           GACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGG                                                                    >  SRR4302541.3669076/1‑94 (MQ=60)

                           GACTATGCCCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGG                                                                    <  SRR4302541.2882381/94‑1 (MQ=60)

                             CTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAA                                                                  >  SRR4302541.5798179/1‑94 (MQ=60)

                             CTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAA                                                                  <  SRR4302541.5363438/94‑1 (MQ=60)

                              TATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAG                                                                 >  SRR4302541.6666331/1‑94 (MQ=60)

                                 GCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCT                                                              <  SRR4302541.6279796/94‑1 (MQ=60)

                                 GCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCT                                                              <  SRR4302541.3170706/94‑1 (MQ=60)

                                 GCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCT                                                              <  SRR4302541.3716173/94‑1 (MQ=60)

                                 GCGCCGCCGTTAAGTCCGCTTATACACCAGCTTAAATTTTCCCGGCGCAGTTAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCT                                                              <  SRR4302541.5523454/94‑1 (MQ=60)

                                  CGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTT                                                             <  SRR4302541.5841744/94‑1 (MQ=60)

                                   GCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTA                                                            >  SRR4302541.1953721/1‑94 (MQ=60)

                                   GCCGCCGTTAAGTCCGCTTATCCACCAGCTGAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTA                                                            >  SRR4302541.7903569/1‑94 (MQ=60)

                                    CCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTAC                                                           <  SRR4302541.3101467/94‑1 (MQ=60)

                                    CCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTAC                                                           <  SRR4302541.8904294/94‑1 (MQ=60)

                                     CGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACA                                                          >  SRR4302541.3632474/1‑94 (MQ=60)

                                      GCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACAC                                                         >  SRR4302541.6358023/1‑94 (MQ=60)

                                      GCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACAC                                                         <  SRR4302541.3650571/94‑1 (MQ=60)

                                      GCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACAC                                                         <  SRR4302541.2222950/94‑1 (MQ=60)

                                      GCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACAC                                                         <  SRR4302541.4408849/94‑1 (MQ=60)

                                      GCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACAC                                                         <  SRR4302541.3536628/94‑1 (MQ=60)

                                      GCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACAC                                                         <  SRR4302541.3900420/94‑1 (MQ=60)

                                       gcgtgAAGTCCCCTTATCCCCCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG                                                        <  SRR4302541.2469701/89‑1 (MQ=60)

                                       CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG                                                        >  SRR4302541.2829201/1‑94 (MQ=60)

                                       CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG                                                        >  SRR4302541.6316650/1‑94 (MQ=60)

                                       CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG                                                        >  SRR4302541.1860367/1‑94 (MQ=60)

                                       CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG                                                        <  SRR4302541.7839747/94‑1 (MQ=60)

                                       CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG                                                        <  SRR4302541.2469700/94‑1 (MQ=60)

                                         GTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCT                                                      <  SRR4302541.1610114/94‑1 (MQ=60)

                                         GTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCT                                                      <  SRR4302541.3912444/94‑1 (MQ=60)

                                         GTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCT                                                      >  SRR4302541.6285015/1‑94 (MQ=60)

                                         GTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCT                                                      <  SRR4302541.545263/94‑1 (MQ=60)

                                          TTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTC                                                     <  SRR4302541.7836694/94‑1 (MQ=60)

                                          TTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTC                                                     <  SRR4302541.324635/94‑1 (MQ=60)

                                          TTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTC                                                     <  SRR4302541.5207332/94‑1 (MQ=60)

                                          TTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTC                                                     <  SRR4302541.3642923/94‑1 (MQ=60)

                                          TTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTC                                                     <  SRR4302541.4607453/94‑1 (MQ=60)

                                          TTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCACTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTC                                                     <  SRR4302541.4060678/94‑1 (MQ=60)

                                           TAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCG                                                    >  SRR4302541.7318042/1‑94 (MQ=60)

                                           TAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCG                                                    <  SRR4302541.8618388/94‑1 (MQ=60)

                                           TAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCG                                                    <  SRR4302541.4643470/94‑1 (MQ=60)

                                           TAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCG                                                    >  SRR4302541.2586535/1‑94 (MQ=60)

                                            AAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGT                                                   <  SRR4302541.3149041/94‑1 (MQ=60)

                                            AAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGT                                                   >  SRR4302541.6734333/1‑94 (MQ=60)

                                            AAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGAGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGT                                                   >  SRR4302541.2362051/1‑94 (MQ=60)

                                             AGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTC                                                  >  SRR4302541.7959893/1‑94 (MQ=60)

                                              GTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCG                                                 >  SRR4302541.5948829/1‑94 (MQ=60)

                                               TCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGC                                                >  SRR4302541.6804568/1‑94 (MQ=60)

                                               TCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGC                                                >  SRR4302541.3489062/1‑94 (MQ=60)

                                                CCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCA                                               <  SRR4302541.6811822/94‑1 (MQ=60)

                                                 CGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCAC                                              >  SRR4302541.6332409/1‑94 (MQ=60)

                                                 CGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCAC                                              >  SRR4302541.2453373/1‑94 (MQ=60)

                                                  GCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACC                                             <  SRR4302541.393543/94‑1 (MQ=60)

                                                  GCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACC                                             >  SRR4302541.3739391/1‑94 (MQ=60)

                                                  GCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACC                                             >  SRR4302541.8224967/1‑94 (MQ=60)

                                                  GCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACC                                             <  SRR4302541.1318642/94‑1 (MQ=60)

                                                  GCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACC                                             <  SRR4302541.5018988/94‑1 (MQ=60)

                                                   CTTATCCACCAGCTTAAATTTTCCCGGGGCAGTGAAATCGGCGGCGCCCTGTCACGGCTGCTACTATTGGTAGTCTTACACGCTCGTCGCACCC                                            >  SRR4302541.3488571/1‑94 (MQ=60)

                                                   CTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTTACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCA                                            >  SRR4302541.8124543/1‑94 (MQ=60)

                                                   CTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCA                                            <  SRR4302541.1584711/94‑1 (MQ=60)

                                                   CTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCA                                            <  SRR4302541.2621913/94‑1 (MQ=60)

                                                   CTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCA                                            >  SRR4302541.5578857/1‑94 (MQ=60)

                                                    TTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCAC                                           >  SRR4302541.6828204/1‑94 (MQ=60)

                                                    CTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCAC                                           <  SRR4302541.5923202/94‑1 (MQ=60)

                                                     TATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACC                                          <  SRR4302541.6420797/94‑1 (MQ=60)

                                                     TATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACC                                          <  SRR4302541.6894602/94‑1 (MQ=60)

                                                     TATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACC                                          <  SRR4302541.5600005/94‑1 (MQ=60)

                                                     TATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACC                                          >  SRR4302541.481139/1‑94 (MQ=60)

                                                     TATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACC                                          >  SRR4302541.400449/1‑94 (MQ=60)

                                                      ATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCG                                         >  SRR4302541.6519248/1‑94 (MQ=60)

                                                      ATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCG                                         <  SRR4302541.7596607/94‑1 (MQ=60)

                                                      ATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCG                                         <  SRR4302541.6387999/94‑1 (MQ=60)

                                                      ATCCACCAGCTTAAATTTTCCCGGCGCAGCGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCG                                         <  SRR4302541.3332783/94‑1 (MQ=60)

                                                       TCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGG                                        >  SRR4302541.3386943/1‑94 (MQ=60)

                                                       TCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGG                                        <  SRR4302541.6660472/94‑1 (MQ=60)

                                                        CCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGG                                       >  SRR4302541.8309145/1‑94 (MQ=60)

                                                        CCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGG                                       <  SRR4302541.4325589/94‑1 (MQ=60)

                                                        CCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGG                                       <  SRR4302541.4318624/94‑1 (MQ=60)

                                                         CACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGT                                      >  SRR4302541.449802/1‑94 (MQ=60)

                                                         CACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGT                                      >  SRR4302541.6434969/1‑94 (MQ=60)

                                                         CACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGT                                      >  SRR4302541.5492995/1‑94 (MQ=60)

                                                         CACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGCGT                                      >  SRR4302541.5427323/1‑94 (MQ=60)

                                                          CCCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTT                                     <  SRR4302541.3056132/94‑1 (MQ=60)

                                                          ACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTT                                     <  SRR4302541.5224231/94‑1 (MQ=60)

                                                          ACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTT                                     <  SRR4302541.7574515/94‑1 (MQ=60)

                                                           CCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCCCCGGGTTG                                    >  SRR4302541.7544760/1‑94 (MQ=60)

                                                           CCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTG                                    <  SRR4302541.4479374/94‑1 (MQ=60)

                                                           CCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTG                                    <  SRR4302541.1772863/94‑1 (MQ=60)

                                                           CCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTG                                    >  SRR4302541.5998564/1‑94 (MQ=60)

                                                            CAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGC                                   <  SRR4302541.5048800/94‑1 (MQ=60)

                                                             AGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCA                                  >  SRR4302541.4920422/1‑94 (MQ=60)

                                                             AGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCA                                  >  SRR4302541.2840190/1‑94 (MQ=60)

                                                             AGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCA                                  >  SRR4302541.2840191/1‑94 (MQ=60)

                                                              GCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAA                                 <  SRR4302541.7307362/94‑1 (MQ=60)

                                                              GCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAA                                 >  SRR4302541.7081356/1‑94 (MQ=60)

                                                              GCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAA                                 >  SRR4302541.2979191/1‑94 (MQ=60)

                                                              GCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAA                                 <  SRR4302541.4637679/94‑1 (MQ=60)

                                                              GCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAA                                 >  SRR4302541.164371/1‑94 (MQ=60)

                                                               CTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAAT                                >  SRR4302541.3273815/1‑94 (MQ=60)

                                                               CTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAAT                                >  SRR4302541.7563043/1‑94 (MQ=60)

                                                               CTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAAT                                >  SRR4302541.4816133/1‑94 (MQ=60)

                                                                TTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATT                               <  SRR4302541.4829467/94‑1 (MQ=60)

                                                                  AAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGC                             <  SRR4302541.7791043/94‑1 (MQ=60)

                                                                  AAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGC                             <  SRR4302541.6802948/94‑1 (MQ=60)

                                                                    ATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCG                           >  SRR4302541.6117202/1‑94 (MQ=60)

                                                                    ATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCG                           <  SRR4302541.2646067/94‑1 (MQ=60)

                                                                      TTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGA                         >  SRR4302541.6033405/1‑94 (MQ=60)

                                                                       TTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGAT                        <  SRR4302541.8491281/94‑1 (MQ=60)

                                                                       TTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGAT                        <  SRR4302541.1950251/94‑1 (MQ=60)

                                                                        TCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCGCCACCGGGTTGCAATTGCCGGATC                       <  SRR4302541.8425968/94‑1 (MQ=60)

                                                                        TCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATC                       >  SRR4302541.2601771/1‑94 (MQ=60)

                                                                        TCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATC                       <  SRR4302541.4544729/94‑1 (MQ=60)

                                                                        TCCCGGCGCAGTGAAATCCCTGGCGGCCTGTCACGGCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATC                       <  SRR4302541.4425382/94‑1 (MQ=60)

                                                                        TCACGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATC                       >  SRR4302541.1726138/1‑94 (MQ=60)

                                                                           CGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCA                    >  SRR4302541.6750119/1‑94 (MQ=60)

                                                                              CGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCG                 >  SRR4302541.4628530/1‑94 (MQ=60)

                                                                               GCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGT                >  SRR4302541.5135044/1‑94 (MQ=60)

                                                                               GCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGT                <  SRR4302541.1172627/94‑1 (MQ=60)

                                                                               GCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGT                >  SRR4302541.3069147/1‑94 (MQ=60)

                                                                                CAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTC               >  SRR4302541.6487900/1‑94 (MQ=60)

                                                                                CAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTC               >  SRR4302541.5829034/1‑94 (MQ=60)

                                                                                 AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA              >  SRR4302541.6150052/1‑94 (MQ=60)

                                                                                 AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA              >  SRR4302541.6016563/1‑94 (MQ=60)

                                                                                 AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA              >  SRR4302541.8203859/1‑94 (MQ=60)

                                                                                 AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA              >  SRR4302541.7878765/1‑94 (MQ=60)

                                                                                 AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA              <  SRR4302541.8329927/94‑1 (MQ=60)

                                                                                 AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA              <  SRR4302541.8890828/94‑1 (MQ=60)

                                                                                  GTGAAATCGCCAGCGCCCTGTCACGTCTGTTTCTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGAAATTGCCGGATCGCATCGTCAG             <  SRR4302541.1536938/94‑1 (MQ=60)

                                                                                   TGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTTGCACCACCGGGTTGCAATTGCCGGATCGCAACGTCAGC            >  SRR4302541.3043295/1‑94 (MQ=60)

                                                                                   TGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCGCCGGGTTGCAATTGCCGGATCGCATCGTCAGC            <  SRR4302541.3997650/94‑1 (MQ=60)

                                                                                    GAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCG           <  SRR4302541.7512807/94‑1 (MQ=60)

                                                                                    GAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCG           >  SRR4302541.6485596/1‑94 (MQ=60)

                                                                                    GAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCATCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCG           >  SRR4302541.245458/1‑94 (MQ=60)

                                                                                     AAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGT          >  SRR4302541.4250067/1‑94 (MQ=60)

                                                                                     AAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGGTGCAATTGCCGGATCGCATCGTCAGCGT          >  SRR4302541.3222058/1‑94 (MQ=60)

                                                                                      AATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCCCCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTT         <  SRR4302541.2529503/94‑1 (MQ=60)

                                                                                      AATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCCCCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTT         >  SRR4302541.2636532/1‑94 (MQ=60)

                                                                                      AATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTT         <  SRR4302541.2126969/94‑1 (MQ=60)

                                                                                       ATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTC        >  SRR4302541.3887630/1‑94 (MQ=60)

                                                                                       ATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTC        >  SRR4302541.7555405/1‑94 (MQ=60)

                                                                                        TCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCC       <  SRR4302541.3890229/94‑1 (MQ=60)

                                                                                         CGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG      >  SRR4302541.4475617/1‑94 (MQ=60)

                                                                                            CGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTA   <  SRR4302541.6808654/94‑1 (MQ=60)

                                                                                            CGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTA   <  SRR4302541.2906422/94‑1 (MQ=60)

                                                                                             GGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACTCGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTAT  <  SRR4302541.3762199/94‑1 (MQ=60)

                                                                                             GGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCTTTCCGTTAT  >  SRR4302541.2224904/1‑94 (MQ=60)

                                                                                             GGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTAT  <  SRR4302541.2337528/94‑1 (MQ=60)

                                                                                             GGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTAT  <  SRR4302541.6344948/94‑1 (MQ=60)

                                                                                             GGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGGTGAAATTGCCGGATCGCATCGTCAGCTGTCCGTTAT  >  SRR4302541.3396061/1‑94 (MQ=60)

CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTAT  >  NC_000913/3542695‑3542881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`