Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,542,788 |
A→G |
S107G (AGC→GGC) |
yhgH → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,542,788 | 0 | A | G | 100.0%
| 825.0
/ NA
| 238 | S107G (AGC→GGC) | yhgH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (125/113); total (125/113) |
Only 100 of 242 total aligned reads displayed.
TGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG > NC_000913/3542698‑3542877
|
tGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGgc > 1:4751120/1‑93 (MQ=255)
gCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGgcgc < 2:2566773/93‑1 (MQ=255)
cAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGcc < 2:205107/93‑1 (MQ=255)
aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc > 2:1245859/1‑93 (MQ=255)
aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc > 1:4353767/1‑93 (MQ=255)
aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc < 2:4986607/93‑1 (MQ=255)
aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc < 2:1531503/93‑1 (MQ=255)
aaaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGCCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGccc > 1:2584315/1‑93 (MQ=255)
aaGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCt > 2:1471903/1‑93 (MQ=255)
aGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTg > 2:2370634/1‑93 (MQ=255)
gACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGt > 1:2339623/1‑93 (MQ=255)
gACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGt < 2:1786046/93‑1 (MQ=255)
tCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTc < 1:5063699/93‑1 (MQ=255)
cGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCGACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGt > 1:2437392/1‑93 (MQ=255)
cGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGt < 2:421982/93‑1 (MQ=255)
cGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGt < 2:2146572/93‑1 (MQ=255)
ggTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGtt < 2:1588580/93‑1 (MQ=255)
gTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTa < 2:4108544/93‑1 (MQ=255)
gTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTa > 1:2859019/1‑93 (MQ=255)
gTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTa > 1:183546/1‑93 (MQ=255)
ttGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTAc > 2:5679485/1‑93 (MQ=255)
gCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTa < 2:5266740/93‑1 (MQ=255)
ccGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTAt > 2:6001783/1‑93 (MQ=255)
ccGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTCTTACTAt < 1:5214979/93‑1 (MQ=255)
gACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTg < 2:2316523/93‑1 (MQ=255)
aTGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAg < 2:5056711/93‑1 (MQ=255)
tGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGt > 2:3068369/1‑93 (MQ=255)
cgccgcCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCt > 1:6060570/1‑93 (MQ=255)
cgccgcCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCt < 1:3257950/93‑1 (MQ=255)
cgccgcCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCt < 2:3815012/93‑1 (MQ=255)
cgccgcCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCt < 1:1704497/93‑1 (MQ=255)
ccgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTa > 1:5050627/1‑93 (MQ=255)
ccgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTa < 2:4561167/93‑1 (MQ=255)
cgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCTGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTac < 2:3337502/93‑1 (MQ=255)
cgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTac < 1:3720916/93‑1 (MQ=255)
cgccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTac < 2:5329052/93‑1 (MQ=255)
gccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTaca > 2:2500343/1‑93 (MQ=255)
gccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTaca < 2:6309706/93‑1 (MQ=255)
ccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTacac < 2:2862547/93‑1 (MQ=255)
ccgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTacac < 1:2074960/93‑1 (MQ=255)
cgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACg > 2:4388192/1‑93 (MQ=255)
cgTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACg > 1:410237/1‑93 (MQ=255)
gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc < 2:2641591/93‑1 (MQ=255)
gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc > 1:3519253/1‑93 (MQ=255)
gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc < 2:5773720/93‑1 (MQ=255)
gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGc < 1:4994791/93‑1 (MQ=255)
gTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGACACGTCTGTTACTATTGGAAGGCTTACACGc > 1:1412521/1‑93 (MQ=255)
tAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtc < 1:6426285/93‑1 (MQ=255)
gTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtcgtc < 1:886384/93‑1 (MQ=255)
gTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtcgtc > 1:2673806/1‑93 (MQ=255)
tCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCtcgtcg > 2:738135/1‑93 (MQ=255)
cGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGca > 1:4682401/1‑93 (MQ=255)
cTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacc < 2:5486248/93‑1 (MQ=255)
cTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacc < 2:4723577/93‑1 (MQ=255)
cTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacc < 2:1882806/93‑1 (MQ=255)
ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacca > 2:692201/1‑93 (MQ=255)
ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacca > 1:2852671/1‑93 (MQ=255)
ttATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcacca > 1:2766726/1‑93 (MQ=255)
tATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcaccac < 2:6424825/93‑1 (MQ=255)
tATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGcaccac < 2:4475513/93‑1 (MQ=255)
tATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATGGGAAGTCTTACACGCTCGTCGcaccac < 1:5175115/93‑1 (MQ=255)
aTCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCaccacc > 2:373628/1‑93 (MQ=255)
aTCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCaccacc > 1:3869962/1‑93 (MQ=255)
tCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCg < 1:1438803/93‑1 (MQ=255)
tCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCg > 1:1011402/1‑93 (MQ=255)
ccaccaGCTTAAATTTTCCCGTCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCgg < 2:4256322/93‑1 (MQ=255)
ccaccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCgg > 2:2332001/1‑93 (MQ=255)
caccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCggg > 1:6392615/1‑93 (MQ=255)
accaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCGCCACCAGGt > 1:6212912/1‑93 (MQ=255)
accaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGt < 2:2998235/93‑1 (MQ=255)
ccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGtt < 1:5443452/93‑1 (MQ=255)
ccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGtt > 1:3398031/1‑93 (MQ=255)
ccaGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGtt > 1:1181133/1‑93 (MQ=255)
caGCTTAAGTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTg > 1:6291808/1‑93 (MQ=255)
aGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGc > 1:536586/1‑93 (MQ=255)
aGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGc > 2:3528441/1‑93 (MQ=255)
aGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGc > 2:1032294/1‑93 (MQ=255)
ttAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAAt < 1:2017053/93‑1 (MQ=255)
tAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAAtt > 2:289368/1‑93 (MQ=255)
aaaTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTg < 2:1095543/93‑1 (MQ=255)
aaTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGc < 1:1572364/93‑1 (MQ=255)
aTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGcc < 1:1108223/93‑1 (MQ=255)
ttttCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCg > 1:5456459/1‑93 (MQ=255)
tttCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCgg < 1:3651688/93‑1 (MQ=255)
tgccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGAt < 2:1434604/91‑1 (MQ=255)
cccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATc < 2:2418014/93‑1 (MQ=255)
ccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCg < 2:4246716/93‑1 (MQ=255)
ccGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCg < 1:6012796/93‑1 (MQ=255)
gcgcAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCAt > 2:3884069/1‑93 (MQ=255)
cAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGt < 1:444340/93‑1 (MQ=255)
aGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTc > 2:1338734/1‑93 (MQ=255)
gTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCa < 2:2943358/93‑1 (MQ=255)
gTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCa < 1:4306134/93‑1 (MQ=255)
gAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGc < 2:3387441/93‑1 (MQ=255)
gAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGc > 2:1965433/1‑93 (MQ=255)
aaaTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCg < 1:46205/93‑1 (MQ=255)
aTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGtt > 2:3617105/1‑93 (MQ=255)
aTCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGtt > 1:4002650/1‑93 (MQ=255)
tCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTc < 2:755135/93‑1 (MQ=255)
cGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTcc < 1:735432/93‑1 (MQ=255)
|
TGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG > NC_000913/3542698‑3542877
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTAT > NC_000913/3542695‑3542881
|
CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCG > SRR4302534.920046/1‑94 (MQ=60)
CCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGG > SRR4302534.4578450/1‑94 (MQ=60)
CCTGGCAAAAACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGG > SRR4302534.6436212/1‑94 (MQ=60)
CTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGC > SRR4302534.4880094/1‑94 (MQ=60)
CTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGC < SRR4302534.4111388/94‑1 (MQ=60)
CAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCC > SRR4302534.4471293/1‑94 (MQ=60)
CAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCC > SRR4302534.1585288/1‑94 (MQ=60)
CAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGCCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCC > SRR4302534.2652732/1‑94 (MQ=60)
AAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCT > SRR4302534.3028585/1‑94 (MQ=60)
AAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCT < SRR4302534.1681629/94‑1 (MQ=60)
AAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTG > SRR4302534.5264410/1‑94 (MQ=60)
AGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGT > SRR4302534.2401712/1‑94 (MQ=60)
GACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCTGCGCAGTGCAATCGCCCGCGGCCTGTC > SRR4302534.1289833/1‑94 (MQ=60)
actgggccgGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCA < SRR4302534.1068600/85‑1 (MQ=60)
TGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACG > SRR4302534.2868067/1‑94 (MQ=60)
TGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACG > SRR4302534.790557/1‑94 (MQ=60)
TCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCT > SRR4302534.4774289/1‑94 (MQ=60)
TCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCT < SRR4302534.5200424/94‑1 (MQ=60)
ACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCGACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGT > SRR4302534.2502171/1‑94 (MQ=60)
CGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTT < SRR4302534.6219765/94‑1 (MQ=60)
GGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTA > SRR4302534.2934113/1‑94 (MQ=60)
GGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTA > SRR4302534.4716775/1‑94 (MQ=60)
GGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTA > SRR4302534.188375/1‑94 (MQ=60)
TGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTA > SRR4302534.4462587/1‑94 (MQ=60)
CCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTCTTACTATT < SRR4302534.5355725/94‑1 (MQ=60)
CGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTG < SRR4302534.5783502/94‑1 (MQ=60)
CGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTG > SRR4302534.5196058/1‑94 (MQ=60)
CGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTG > SRR4302534.2718781/1‑94 (MQ=60)
CGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTG > SRR4302534.2814730/1‑94 (MQ=60)
GACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGG > SRR4302534.5526967/1‑94 (MQ=60)
TATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAG < SRR4302534.2892825/94‑1 (MQ=60)
TATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAG < SRR4302534.1867047/94‑1 (MQ=60)
ATCCGCCCCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGT < SRR4302534.5164818/94‑1 (MQ=60)
TGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTC < SRR4302534.5641079/94‑1 (MQ=60)
TGCGCCGCCGTTAAGTCCCCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCTCCCTGTCACGTCTGTTACTATTGGAAGTC < SRR4302534.1128258/94‑1 (MQ=60)
GCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCT < SRR4302534.4552215/94‑1 (MQ=60)
GCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCT > SRR4302534.6225365/1‑94 (MQ=60)
CGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTT < SRR4302534.3344712/94‑1 (MQ=60)
CGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTT < SRR4302534.1748783/94‑1 (MQ=60)
GCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTA < SRR4302534.2933480/94‑1 (MQ=60)
GCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTA < SRR4302534.4814861/94‑1 (MQ=60)
GCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTA > SRR4302534.5187011/1‑94 (MQ=60)
CCCGCGGTTAAGTCCGCTTATCCCCCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTA < SRR4302534.30483/94‑1 (MQ=60)
CCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTAC < SRR4302534.3628086/94‑1 (MQ=60)
CGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACA > SRR4302534.3558066/1‑94 (MQ=60)
CGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACA < SRR4302534.3820933/94‑1 (MQ=60)
CGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACA > SRR4302534.1179085/1‑94 (MQ=60)
CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG > SRR4302534.3416178/1‑94 (MQ=60)
CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG < SRR4302534.2129277/94‑1 (MQ=60)
CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG > SRR4302534.420729/1‑94 (MQ=60)
CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG < SRR4302534.6585641/94‑1 (MQ=60)
CCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACG > SRR4302534.416024/1‑94 (MQ=60)
CGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGC < SRR4302534.558105/94‑1 (MQ=60)
CGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGC > SRR4302534.3613904/1‑94 (MQ=60)
CGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGACACGTCTGTTACTATTGGAAGGCTTACACGC > SRR4302534.1449677/1‑94 (MQ=60)
GTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCT < SRR4302534.5129882/94‑1 (MQ=60)
ttagatcctCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGGTACTATTGGAAGTCTTACACGCTC < SRR4302534.4377020/85‑1 (MQ=60)
TTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTC < SRR4302534.3779698/94‑1 (MQ=60)
TTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTC < SRR4302534.1531723/94‑1 (MQ=60)
TAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCG < SRR4302534.6599592/94‑1 (MQ=60)
AAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGT < SRR4302534.2615952/94‑1 (MQ=60)
AGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTC < SRR4302534.3650709/94‑1 (MQ=60)
AGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTC > SRR4302534.2744477/1‑94 (MQ=60)
GTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCG < SRR4302534.908824/94‑1 (MQ=60)
CCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCA > SRR4302534.2462487/1‑94 (MQ=60)
CCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCA > SRR4302534.4809525/1‑94 (MQ=60)
CCGCTTATCCACCAGCTTAAATCTTCCCGGCGCAGTGAAATCGCCGGCCCCATGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCA < SRR4302534.5913265/94‑1 (MQ=60)
CTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCA > SRR4302534.2839555/1‑94 (MQ=60)
CTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCA > SRR4302534.2927606/1‑94 (MQ=60)
TATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACC > SRR4302534.3973872/1‑94 (MQ=60)
TATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATGGGAAGTCTTACACGCTCGTCGCACCACC < SRR4302534.5314574/94‑1 (MQ=60)
ATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCG > SRR4302534.1037416/1‑94 (MQ=60)
TCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGG < SRR4302534.795025/94‑1 (MQ=60)
TCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGG < SRR4302534.1476680/94‑1 (MQ=60)
CCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGG > SRR4302534.6565270/1‑94 (MQ=60)
CCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGG > SRR4302534.4276940/1‑94 (MQ=60)
CCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCCGG > SRR4302534.2342804/1‑94 (MQ=60)
CACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCGCCACCAGGT > SRR4302534.6381740/1‑94 (MQ=60)
CACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGT > SRR4302534.6381741/1‑94 (MQ=60)
CACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGT > SRR4302534.5481097/1‑94 (MQ=60)
ACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTT > SRR4302534.3489222/1‑94 (MQ=60)
ACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTT > SRR4302534.1212182/1‑94 (MQ=60)
CCAGCTTAAGTTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTG > SRR4302534.6462024/1‑94 (MQ=60)
CCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTG < SRR4302534.5590094/94‑1 (MQ=60)
CAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGC > SRR4302534.549896/1‑94 (MQ=60)
AGCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCA < SRR4302534.750715/94‑1 (MQ=60)
GCTTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAA > SRR4302534.4190390/1‑94 (MQ=60)
GCTTAAATTTTCCCGGCGCAGTGAAATAAACGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCCCGTCCCACCACCCGGGTGCAA > SRR4302534.4897163/1‑94 (MQ=60)
TTAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATT < SRR4302534.2069839/94‑1 (MQ=60)
TAAATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGTTTGCAATTG < SRR4302534.6494129/94‑1 (MQ=60)
AAATTTTCCCGGCGCAGTGCAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGC > SRR4302534.6323141/1‑94 (MQ=60)
AATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCC < SRR4302534.1613532/94‑1 (MQ=60)
AATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCC > SRR4302534.6502589/1‑94 (MQ=60)
ATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCG < SRR4302534.1137121/94‑1 (MQ=60)
ATTTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCG > SRR4302534.5603492/1‑94 (MQ=60)
TTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGA < SRR4302534.3749828/94‑1 (MQ=60)
TTTCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGA < SRR4302534.1935181/94‑1 (MQ=60)
TCCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCCCCACCGGGTTGCAATTGCCGGATC < SRR4302534.2201326/94‑1 (MQ=60)
CCCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCG > SRR4302534.4032702/1‑94 (MQ=60)
CCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGC > SRR4302534.1465521/1‑94 (MQ=60)
CCGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGC < SRR4302534.6176175/94‑1 (MQ=60)
CGGCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCA < SRR4302534.5334948/94‑1 (MQ=60)
GCGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATC > SRR4302534.5227208/1‑94 (MQ=60)
CGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCG < SRR4302534.2086054/94‑1 (MQ=60)
CGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCG > SRR4302534.494269/1‑94 (MQ=60)
CGCAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCG > SRR4302534.4781275/1‑94 (MQ=60)
GCAGTGAAATCGCCGGCGTCCTGTCTCGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCGATTGCCGGATCGCATCGT < SRR4302534.3821020/94‑1 (MQ=60)
CAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTC > SRR4302534.492256/1‑94 (MQ=60)
CAGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTC < SRR4302534.455620/94‑1 (MQ=60)
AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA > SRR4302534.2518358/1‑94 (MQ=60)
AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA > SRR4302534.3875649/1‑94 (MQ=60)
AGTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCA > SRR4302534.5505142/1‑94 (MQ=60)
GTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAG < SRR4302534.4500282/94‑1 (MQ=60)
GTGAAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAG < SRR4302534.4422855/94‑1 (MQ=60)
AAATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGT < SRR4302534.47438/94‑1 (MQ=60)
AATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTT < SRR4302534.1214191/94‑1 (MQ=60)
AATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTT > SRR4302534.4109814/1‑94 (MQ=60)
AATCGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTT > SRR4302534.6340064/1‑94 (MQ=60)
CGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG < SRR4302534.753621/94‑1 (MQ=60)
CGCCGGCGCCCTGTCACGTCTGTTACTATTGGAAGCCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCG > SRR4302534.1978396/1‑94 (MQ=60)
CCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTT < SRR4302534.3579578/94‑1 (MQ=60)
CCGGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGGCGCACCACCGGTTTGCAATTGCCGGATCGCATCGCCAGCGTTCCGTT < SRR4302534.4342018/94‑1 (MQ=60)
GGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCCTCGTCAGTGTTCCGTTAT > SRR4302534.5847589/1‑94 (MQ=60)
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CCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCACCAGCTTAAATTTTCCCGGCGCAGTGAAATCGCCAGCGCCCTGTCACGTCTGTTACTATTGGAAGTCTTACACGCTCGTCGCACCACCGGGTTGCAATTGCCGGATCGCATCGTCAGCGTTCCGTTAT > NC_000913/3542695‑3542881
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
