Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,609,245 T→C L54L (TTA→TTG)  yhhS ← putative transport

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,609,2450TC99.7% 1315.4 / ‑4.9 382L54L (TTA→TTG) yhhSputative transport
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (168/212);  total (168/214)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 393 total aligned reads displayed.

GCGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTT  >  NC_000913/3609155‑3609334
                                                                                          |                                                                                         
  ggcTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATa                                                                                       >  1:7483617/1‑93 (MQ=255)
  ggcTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATa                                                                                       >  2:6959326/1‑93 (MQ=255)
  ggcTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATa                                                                                       <  2:2985138/93‑1 (MQ=255)
   gcTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATAc                                                                                      <  1:4785330/93‑1 (MQ=255)
   gcTCAGCAAGCTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATAc                                                                                      <  2:1039050/93‑1 (MQ=255)
    cTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACa                                                                                     <  1:4481489/93‑1 (MQ=255)
     tCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACag                                                                                    <  1:7717624/93‑1 (MQ=255)
      cAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGTCCGGCAATACagc                                                                                   <  2:4394653/93‑1 (MQ=255)
        gCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCACTACaccga                                                                                 >  2:7424724/1‑93 (MQ=255)
        gCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACagcga                                                                                 >  2:5356629/1‑93 (MQ=255)
         cAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACagcgag                                                                                <  2:8503242/93‑1 (MQ=255)
             gTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGc                                                                            <  1:7270999/93‑1 (MQ=255)
               ggCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCaa                                                                          <  1:1864195/93‑1 (MQ=255)
                gCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAAc                                                                         >  1:2788261/1‑93 (MQ=255)
                 cGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAAcc                                                                        <  2:1327312/93‑1 (MQ=255)
                   aaaTATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCg                                                                      <  1:4629611/93‑1 (MQ=255)
                   aaaTATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCg                                                                      <  2:727474/93‑1 (MQ=255)
                    aaTATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGa                                                                     >  2:448657/1‑93 (MQ=255)
                    aaTATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGa                                                                     >  2:637387/1‑93 (MQ=255)
                         tGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCTGCAATACAGCGAGCGGCAACCCGATGGTg                                                                <  2:1841609/93‑1 (MQ=255)
                          gCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGa                                                               >  1:3528403/1‑93 (MQ=255)
                           cAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAg                                                              <  2:5668754/93‑1 (MQ=255)
                             ggCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGTACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGTTGAGGt                                                            >  2:386843/1‑93 (MQ=255)
                             ggCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGt                                                            <  1:4112854/93‑1 (MQ=255)
                               cTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAg                                                          <  2:7714648/93‑1 (MQ=255)
                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATCACGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         >  1:1127104/1‑93 (MQ=255)
                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         <  1:2129113/93‑1 (MQ=255)
                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         >  1:3115464/1‑93 (MQ=255)
                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         <  2:3547364/93‑1 (MQ=255)
                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         >  1:6651012/1‑93 (MQ=255)
                                tGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACAAAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGc                                                         >  1:4850352/1‑93 (MQ=255)
                                 gATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCt                                                        <  2:5179419/93‑1 (MQ=255)
                                 gATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCt                                                        >  2:5023875/1‑93 (MQ=255)
                                 gATAACCAATCCTGCCCAGAAGGCGCTAAAGACCATCACATCATGGACATAGCCCGGCAATACAGCGAGCCGCAACCCGATGGTGAGGTAGCt                                                        >  2:234110/1‑93 (MQ=255)
                                    aaCCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTggg                                                     >  2:166420/1‑92 (MQ=255)
                                    aaCCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGc                                                     <  2:3355095/93‑1 (MQ=255)
                                     aCCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCg                                                    >  2:8321100/1‑93 (MQ=255)
                                       cAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGaa                                                  >  1:19135/1‑93 (MQ=255)
                                        aaTCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAg                                                 <  1:618525/93‑1 (MQ=255)
                                         aTCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGt                                                <  2:8696545/93‑1 (MQ=255)
                                          tCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGtt                                               >  1:1003468/1‑93 (MQ=255)
                                          tCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGtt                                               >  1:5486312/1‑93 (MQ=255)
                                          tCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGAAGCTGGCGAAGtt                                               >  2:4910710/1‑93 (MQ=255)
                                           ccTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTa                                              <  1:5847381/93‑1 (MQ=255)
                                            cTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTaa                                             <  1:3644948/93‑1 (MQ=255)
                                              gCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAAc                                           >  2:627581/1‑93 (MQ=255)
                                               cccAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACa                                          <  1:370828/93‑1 (MQ=255)
                                               cccAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACa                                          <  1:697332/93‑1 (MQ=255)
                                               cccAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACa                                          <  2:8133286/93‑1 (MQ=255)
                                                ccAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAt                                         <  1:8580197/93‑1 (MQ=255)
                                                 cAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATg                                        >  1:8631128/1‑93 (MQ=255)
                                                  aGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGa                                       >  1:8205502/1‑93 (MQ=255)
                                                  aGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGa                                       <  2:2573413/93‑1 (MQ=255)
                                                  aGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGa                                       <  2:6809638/93‑1 (MQ=255)
                                                  aGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGa                                       <  1:3295251/93‑1 (MQ=255)
                                                     aGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACta                                    >  2:1615648/1‑93 (MQ=255)
                                                      ggCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtat                                   >  1:5177547/1‑93 (MQ=255)
                                                      ggCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtat                                   >  2:3742268/1‑93 (MQ=255)
                                                      ggCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtat                                   >  1:7940676/1‑93 (MQ=255)
                                                       gcgcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtata                                  >  2:2009271/1‑93 (MQ=255)
                                                       gcgcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtata                                  <  2:1939840/93‑1 (MQ=255)
                                                       gcgcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACtata                                  <  1:639806/93‑1 (MQ=255)
                                                         gcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATaga                                <  1:6011131/93‑1 (MQ=255)
                                                         gcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATaga                                >  1:4981332/1‑93 (MQ=255)
                                                         gcTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATaga                                <  2:5740809/93‑1 (MQ=255)
                                                           tAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAgaga                              >  1:4213827/1‑93 (MQ=255)
                                                            aaaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGAc                             <  1:8349517/93‑1 (MQ=255)
                                                            aaaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGAc                             <  1:7125045/93‑1 (MQ=255)
                                                             aaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACa                            <  1:6822090/93‑1 (MQ=255)
                                                             aaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACa                            <  2:4119472/93‑1 (MQ=255)
                                                             aaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACa                            >  1:2973085/1‑93 (MQ=255)
                                                             aaGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACa                            >  2:4712897/1‑93 (MQ=255)
                                                               gCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAAt                          >  2:6018822/1‑93 (MQ=255)
                                                                  catcacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATgcg                       >  2:4081932/1‑93 (MQ=255)
                                                                  catcacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATgcg                       >  1:7630846/1‑93 (MQ=255)
                                                                   atcacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGAGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATgcgc                      >  2:2752790/1‑93 (MQ=255)
                                                                    tcacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCa                     <  2:5512304/93‑1 (MQ=255)
                                                                     cacatcaTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCaa                    <  2:2155719/93‑1 (MQ=255)
                                                                       catcatGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAAt                  <  1:2600496/93‑1 (MQ=255)
                                                                        atcatGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAAtt                 <  2:2484302/93‑1 (MQ=255)
                                                                         tcatGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTc                >  2:1707512/1‑93 (MQ=255)
                                                                         tcatGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTAGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTc                >  2:8057835/1‑93 (MQ=255)
                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              >  2:5464216/1‑93 (MQ=255)
                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              >  1:510951/1‑93 (MQ=255)
                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              <  2:6459827/93‑1 (MQ=255)
                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              >  1:5753058/1‑93 (MQ=255)
                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              >  1:1384285/1‑93 (MQ=255)
                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              <  1:55651/93‑1 (MQ=255)
                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAg              <  2:7958262/93‑1 (MQ=255)
                                                                           atGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCCGGCGAAGGTAAACAAGACTATAGAGACAAAGCGCAAAATCAg              >  2:7815893/1‑93 (MQ=255)
                                                                            tGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAgg             >  1:8772374/1‑93 (MQ=255)
                                                                             ggACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGgc            <  2:6488166/93‑1 (MQ=255)
                                                                             ggACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGgc            <  1:1583418/93‑1 (MQ=255)
                                                                                  tAGCGCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAAt       <  1:3019709/93‑1 (MQ=255)
                                                                                  tAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAAt       <  2:2891222/93‑1 (MQ=255)
                                                                                   aGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATc      >  1:6582830/1‑93 (MQ=255)
                                                                                    gCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATcc     >  1:1294781/1‑93 (MQ=255)
                                                                                    gCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATcc     >  1:1746217/1‑93 (MQ=255)
                                                                                    gCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATcc     >  1:2303978/1‑93 (MQ=255)
                                                                                     cccGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCg    <  2:924303/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTT  >  NC_000913/3609155‑3609334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.
GGGCGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTTAGC  >  NC_000913/3609153‑3609338
                                                                                            |                                                                                             
GGGCGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCA                                                                                              >  SRR4302541.570308/1‑94 (MQ=60)
 GGCGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAA                                                                                             >  SRR4302541.1658378/1‑94 (MQ=60)
   CGGCTCAGCAAGGTGGCGAGATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATA                                                                                           <  SRR4302541.1055539/94‑1 (MQ=60)
   CGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATA                                                                                           >  SRR4302541.7563666/1‑94 (MQ=60)
    GGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATAC                                                                                          <  SRR4302541.5909239/94‑1 (MQ=60)
     GCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACA                                                                                         <  SRR4302541.4834163/94‑1 (MQ=60)
     GCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACA                                                                                         >  SRR4302541.4813844/1‑94 (MQ=60)
      CTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAG                                                                                        <  SRR4302541.5950675/94‑1 (MQ=60)
      CTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAG                                                                                        <  SRR4302541.4847289/94‑1 (MQ=60)
      CTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAG                                                                                        <  SRR4302541.4526654/94‑1 (MQ=60)
       TCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGC                                                                                       <  SRR4302541.5047667/94‑1 (MQ=60)
       TCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGC                                                                                       <  SRR4302541.7799710/94‑1 (MQ=60)
       TCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGC                                                                                       >  SRR4302541.6273545/1‑94 (MQ=60)
       TCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGC                                                                                       <  SRR4302541.5755933/94‑1 (MQ=60)
       TCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGC                                                                                       <  SRR4302541.4900478/94‑1 (MQ=60)
       CCAGCAAGGTGGCGAAATATCGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGC                                                                                       <  SRR4302541.7799709/94‑1 (MQ=60)
           CAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGC                                                                                   >  SRR4302541.2541376/1‑94 (MQ=60)
            AAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCG                                                                                  >  SRR4302541.1334078/1‑94 (MQ=60)
            AAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCG                                                                                  >  SRR4302541.7338608/1‑94 (MQ=60)
             AGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGG                                                                                 >  SRR4302541.7483451/1‑94 (MQ=60)
              GGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGC                                                                                <  SRR4302541.1652639/94‑1 (MQ=60)
               GTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGTCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCA                                                                               <  SRR4302541.1512005/94‑1 (MQ=60)
               GTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCA                                                                               <  SRR4302541.7348569/94‑1 (MQ=60)
               GTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCA                                                                               <  SRR4302541.3297719/94‑1 (MQ=60)
                TGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAA                                                                              >  SRR4302541.5096809/1‑94 (MQ=60)
                 GGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAAC                                                                             <  SRR4302541.1882165/94‑1 (MQ=60)
                 GGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAAC                                                                             >  SRR4302541.2816394/1‑94 (MQ=60)
                  GCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACC                                                                            <  SRR4302541.1817385/94‑1 (MQ=60)
                  GCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACC                                                                            <  SRR4302541.7179016/94‑1 (MQ=60)
                    GAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCG                                                                          <  SRR4302541.6547805/94‑1 (MQ=60)
                    GAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCG                                                                          <  SRR4302541.3843351/94‑1 (MQ=60)
                     AAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGA                                                                         <  SRR4302541.4676716/94‑1 (MQ=60)
                     AAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGA                                                                         >  SRR4302541.5292936/1‑94 (MQ=60)
                      AATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGAT                                                                        <  SRR4302541.690107/94‑1 (MQ=60)
                       ATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATG                                                                       >  SRR4302541.4536732/1‑94 (MQ=60)
                       ATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATG                                                                       <  SRR4302541.2321245/94‑1 (MQ=60)
                       ATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATG                                                                       >  SRR4302541.3067749/1‑94 (MQ=60)
                        TATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGG                                                                      <  SRR4302541.3242949/94‑1 (MQ=60)
                        TATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGG                                                                      <  SRR4302541.5545195/94‑1 (MQ=60)
                         ATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGT                                                                     >  SRR4302541.8550414/1‑94 (MQ=60)
                         AGTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGT                                                                     <  SRR4302541.3423460/94‑1 (MQ=60)
                          TTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTG                                                                    <  SRR4302541.74201/94‑1 (MQ=60)
                          TTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTG                                                                    <  SRR4302541.8844856/94‑1 (MQ=60)
                           TGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATATCCCGGCAATACAGCGAGCGGCAACCCGATGGTGA                                                                   <  SRR4302541.6836184/94‑1 (MQ=60)
                           TGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGA                                                                   <  SRR4302541.3671080/94‑1 (MQ=60)
                           TGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGA                                                                   >  SRR4302541.3563925/1‑94 (MQ=60)
                           TGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGA                                                                   >  SRR4302541.4190273/1‑94 (MQ=60)
                           TGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGA                                                                   >  SRR4302541.8702646/1‑94 (MQ=60)
                             CAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGG                                                                 <  SRR4302541.2460949/94‑1 (MQ=60)
                              AGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGT                                                                <  SRR4302541.2811382/94‑1 (MQ=60)
                              AGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGA                                                                >  SRR4302541.1358856/1‑94 (MQ=60)
                              AGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGA                                                                >  SRR4302541.2637794/1‑94 (MQ=60)
                               GGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTA                                                               <  SRR4302541.709451/94‑1 (MQ=60)
                               GGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTA                                                               <  SRR4302541.4153478/94‑1 (MQ=60)
                               GGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTA                                                               <  SRR4302541.4153479/94‑1 (MQ=60)
                               GGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTA                                                               <  SRR4302541.2915039/94‑1 (MQ=60)
                                GCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAG                                                              <  SRR4302541.3030075/94‑1 (MQ=60)
                                GCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAG                                                              <  SRR4302541.3017084/94‑1 (MQ=60)
                                GCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAG                                                              <  SRR4302541.1500323/94‑1 (MQ=60)
                                GCCGATAAACAATCCTGCCCAGAAGGCTCTAAAGCCCATCACATCATGGCCAGAGCCCGGCAATCCAGCGAGCGGCAACCCGATGGTGAGGTAG                                                              <  SRR4302541.3017085/94‑1 (MQ=60)
                                 CTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATCACGCGAGCGGCAACCCGATGGTGAGGTAGC                                                             >  SRR4302541.1137743/1‑94 (MQ=60)
                                 CTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGC                                                             >  SRR4302541.3146998/1‑94 (MQ=60)
                                 CTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGC                                                             >  SRR4302541.6719242/1‑94 (MQ=60)
                                 CTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGC                                                             >  SRR4302541.5764133/1‑94 (MQ=60)
                                 CTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGGGAGGTAGC                                                             >  SRR4302541.1137973/1‑94 (MQ=60)
                                 CTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACAAAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGC                                                             >  SRR4302541.4899805/1‑94 (MQ=60)
                                  TGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCT                                                            >  SRR4302541.6688498/1‑94 (MQ=60)
                                  TGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCT                                                            <  SRR4302541.2149699/94‑1 (MQ=60)
                                   GATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTG                                                           >  SRR4302541.2002495/1‑94 (MQ=60)
                                    ATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCACCCCGATGGTGAGGTAGCTGC                                                          >  SRR4302541.6463820/1‑94 (MQ=60)
                                    ATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGG                                                          <  SRR4302541.2940412/94‑1 (MQ=60)
                                      AACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCG                                                        >  SRR4302541.3697509/1‑94 (MQ=60)
                                      AACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCG                                                        >  SRR4302541.5881452/1‑94 (MQ=60)
                                       ACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGAGGCAACCCGATGGTGAGGTAGCTGGCGA                                                       >  SRR4302541.4250104/1‑94 (MQ=60)
                                        CCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAA                                                      >  SRR4302541.4836985/1‑94 (MQ=60)
                                        CCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAA                                                      >  SRR4302541.19291/1‑94 (MQ=60)
                                          AATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGT                                                    >  SRR4302541.3008523/1‑94 (MQ=60)
                                          AATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGT                                                    <  SRR4302541.4495287/94‑1 (MQ=60)
                                          AATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGT                                                    >  SRR4302541.6718486/1‑94 (MQ=60)
                                          AATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGT                                                    >  SRR4302541.8288308/1‑94 (MQ=60)
                                          AATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGT                                                    <  SRR4302541.7341296/94‑1 (MQ=60)
                                          AATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGT                                                    <  SRR4302541.624328/94‑1 (MQ=60)
                                           ATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCACCCCGATGGTGAGGTAGCTGGCGAAGTT                                                   <  SRR4302541.3720281/94‑1 (MQ=60)
                                           ATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTT                                                   >  SRR4302541.1012783/1‑94 (MQ=60)
                                           ATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTT                                                   >  SRR4302541.5542546/1‑94 (MQ=60)
                                           ATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTT                                                   >  SRR4302541.5885940/1‑94 (MQ=60)
                                           ATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTT                                                   <  SRR4302541.5977979/94‑1 (MQ=60)
                                           ATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTT                                                   >  SRR4302541.1598609/1‑94 (MQ=60)
                                           ATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTT                                                   >  SRR4302541.7975756/1‑94 (MQ=60)
                                            TCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTA                                                  >  SRR4302541.6641414/1‑94 (MQ=60)
                                             CCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAA                                                 <  SRR4302541.5906844/94‑1 (MQ=60)
                                             CCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAA                                                 <  SRR4302541.7688451/94‑1 (MQ=60)
                                              CTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAA                                                <  SRR4302541.3681916/94‑1 (MQ=60)
                                              CTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGACAACCCGATGGTGAGGTAGCTGGCGAAGTTAAA                                                >  SRR4302541.8589736/1‑94 (MQ=60)
                                               TGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAAC                                               >  SRR4302541.703344/1‑94 (MQ=60)
                                                GCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACA                                              <  SRR4302541.4821905/94‑1 (MQ=60)
                                                GCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACA                                              <  SRR4302541.8425288/94‑1 (MQ=60)
                                                GCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACA                                              <  SRR4302541.1900893/94‑1 (MQ=60)
                                                 CCCAGAAGGCGCTAGAGCCCATCGCATCATGGACAGAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAT                                             <  SRR4302541.676389/94‑1 (MQ=60)
                                                 CCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAT                                             <  SRR4302541.374210/94‑1 (MQ=60)
                                                 CCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAT                                             <  SRR4302541.1632885/94‑1 (MQ=60)
                                                 CCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAT                                             <  SRR4302541.703888/94‑1 (MQ=60)
                                                 CCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAT                                             <  SRR4302541.5261990/94‑1 (MQ=60)
                                                 CCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAT                                             >  SRR4302541.5146775/1‑94 (MQ=60)
                                                  CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGCTGGTGAGGGAGCTGGCGAAGTTAAAaata                                            >  SRR4302541.8723615/1‑90 (MQ=60)
                                                  CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATG                                            <  SRR4302541.1912582/94‑1 (MQ=60)
                                                  CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATG                                            >  SRR4302541.8723616/1‑94 (MQ=60)
                                                  CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATG                                            <  SRR4302541.1242546/94‑1 (MQ=60)
                                                  CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATG                                            <  SRR4302541.8672314/94‑1 (MQ=60)
                                                  CCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATG                                            >  SRR4302541.5763283/1‑94 (MQ=60)
                                                   CAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGA                                           >  SRR4302541.8295025/1‑94 (MQ=60)
                                                    AGAAGGCGCTAAAGCGCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCACCCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGAC                                          <  SRR4302541.3076433/94‑1 (MQ=60)
                                                    AGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGAC                                          <  SRR4302541.3328402/94‑1 (MQ=60)
                                                    AGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGAC                                          >  SRR4302541.1304572/1‑94 (MQ=60)
                                                    AGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGAC                                          <  SRR4302541.8803950/94‑1 (MQ=60)
                                                    AGAAGGCCCTAAAGCTCATCACATCATGGACATAGCGCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGAC                                          <  SRR4302541.8658892/94‑1 (MQ=60)
                                                     GAAGGCGCTAAAGCCCATCACATCGTGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACT                                         <  SRR4302541.3454283/94‑1 (MQ=60)
                                                     GAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACT                                         <  SRR4302541.55492/94‑1 (MQ=60)
                                                      AAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTA                                        <  SRR4302541.1810503/94‑1 (MQ=60)
                                                       AGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTAT                                       <  SRR4302541.438096/94‑1 (MQ=60)
                                                       AGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTAT                                       >  SRR4302541.8028137/1‑94 (MQ=60)
                                                       AGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTAT                                       >  SRR4302541.5230813/1‑94 (MQ=60)
                                                       AGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTAT                                       >  SRR4302541.5230811/1‑94 (MQ=60)
                                                        GGCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATA                                      >  SRR4302541.8327164/1‑94 (MQ=60)
                                                         GCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATCCAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAG                                     <  SRR4302541.276431/94‑1 (MQ=60)
                                                         GCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAG                                     <  SRR4302541.645843/94‑1 (MQ=60)
                                                         GCGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAG                                     <  SRR4302541.8403845/94‑1 (MQ=60)
                                                          GGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGA                                    <  SRR4302541.4995970/94‑1 (MQ=60)
                                                          CGCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGA                                    >  SRR4302541.3437496/1‑94 (MQ=60)
                                                           GCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAG                                   <  SRR4302541.6072720/94‑1 (MQ=60)
                                                           GCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAG                                   <  SRR4302541.8067847/94‑1 (MQ=60)
                                                           GCTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAG                                   >  SRR4302541.200421/1‑94 (MQ=60)
                                                            CTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGA                                  <  SRR4302541.7224038/94‑1 (MQ=60)
                                                            CTAAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGA                                  >  SRR4302541.4255747/1‑94 (MQ=60)
                                                              AAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACA                                <  SRR4302541.7200941/94‑1 (MQ=60)
                                                              AAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACA                                <  SRR4302541.8440139/94‑1 (MQ=60)
                                                              AAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACA                                <  SRR4302541.6324127/94‑1 (MQ=60)
                                                              AAAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACA                                >  SRR4302541.3003049/1‑94 (MQ=60)
                                                               AAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAA                               >  SRR4302541.2208082/1‑94 (MQ=60)
                                                               AAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAA                               <  SRR4302541.6895101/94‑1 (MQ=60)
                                                               AAGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAA                               <  SRR4302541.6895102/94‑1 (MQ=60)
                                                               AAGCACATCACATCATGGACATATCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCTAAGTTAAACATGACTATAGAGACAA                               <  SRR4302541.8911640/94‑1 (MQ=60)
                                                                AGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAAT                              <  SRR4302541.2410283/94‑1 (MQ=60)
                                                                AGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAAT                              <  SRR4302541.879244/94‑1 (MQ=60)
                                                                AGCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAAT                              >  SRR4302541.769441/1‑94 (MQ=60)
                                                                 GCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATG                             <  SRR4302541.7802079/94‑1 (MQ=60)
                                                                 GCCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATG                             <  SRR4302541.8687889/94‑1 (MQ=60)
                                                                  CCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGC                            <  SRR4302541.458326/94‑1 (MQ=60)
                                                                  CCCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGC                            <  SRR4302541.4227163/94‑1 (MQ=60)
                                                                   CCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCG                           >  SRR4302541.429438/1‑94 (MQ=60)
                                                                   CCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCG                           <  SRR4302541.1893321/94‑1 (MQ=60)
                                                                   CCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCG                           >  SRR4302541.7712265/1‑94 (MQ=60)
                                                                   CCATCACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCG                           <  SRR4302541.1063782/94‑1 (MQ=60)
                                                                       CACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAA                       >  SRR4302541.3115920/1‑94 (MQ=60)
                                                                        ACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAAT                      <  SRR4302541.4755306/94‑1 (MQ=60)
                                                                        ACATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAAT                      <  SRR4302541.7820578/94‑1 (MQ=60)
                                                                         CATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATT                     <  SRR4302541.2626534/94‑1 (MQ=60)
                                                                         CATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATT                     >  SRR4302541.7198360/1‑94 (MQ=60)
                                                                          ATCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTC                    >  SRR4302541.6074611/1‑94 (MQ=60)
                                                                           TCATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCA                   <  SRR4302541.6791319/94‑1 (MQ=60)
                                                                            CATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAG                  <  SRR4302541.4603782/94‑1 (MQ=60)
                                                                            CATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAG                  >  SRR4302541.1397866/1‑94 (MQ=60)
                                                                            CATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAG                  <  SRR4302541.5172730/94‑1 (MQ=60)
                                                                            CATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAG                  >  SRR4302541.515728/1‑94 (MQ=60)
                                                                            CATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAG                  <  SRR4302541.5172731/94‑1 (MQ=60)
                                                                            CATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAG                  >  SRR4302541.5811626/1‑94 (MQ=60)
                                                                             ATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGG                 >  SRR4302541.3740957/1‑94 (MQ=60)
                                                                             ATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGG                 <  SRR4302541.56091/94‑1 (MQ=60)
                                                                             ATGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGG                 >  SRR4302541.8866149/1‑94 (MQ=60)
                                                                              AGGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGC                <  SRR4302541.6375528/94‑1 (MQ=60)
                                                                               GGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCG               <  SRR4302541.1599219/94‑1 (MQ=60)
                                                                               GGACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCG               <  SRR4302541.6098229/94‑1 (MQ=60)
                                                                                GACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGC              >  SRR4302541.3592469/1‑94 (MQ=60)
                                                                                GACATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGC              >  SRR4302541.3592468/1‑94 (MQ=60)
                                                                                   ATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAAT           <  SRR4302541.1768844/94‑1 (MQ=60)
                                                                                   ATAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAAT           <  SRR4302541.2062334/94‑1 (MQ=60)
                                                                                    TAGCGCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATC          <  SRR4302541.3050194/94‑1 (MQ=60)
                                                                                    TAGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATC          >  SRR4302541.6650206/1‑94 (MQ=60)
                                                                                    TAGCCCGACAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATC          >  SRR4302541.1312424/1‑94 (MQ=60)
                                                                                     AGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCC         >  SRR4302541.2326332/1‑94 (MQ=60)
                                                                                     AGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCC         >  SRR4302541.1763265/1‑94 (MQ=60)
                                                                                     AGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCC         >  SRR4302541.1307561/1‑94 (MQ=60)
                                                                                     AGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCC         <  SRR4302541.587063/94‑1 (MQ=60)
                                                                                     AGCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCC         >  SRR4302541.2916851/1‑94 (MQ=60)
                                                                                      GCCCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCG        <  SRR4302541.4035406/94‑1 (MQ=60)
                                                                                       CCCGGCAATAAAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGAGCAATCCGT       >  SRR4302541.4891253/1‑94 (MQ=60)
                                                                                       CACGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGCCAATGCGCAAATTCAGGCGCAATCCGT       <  SRR4302541.7779159/94‑1 (MQ=60)
                                                                                        CCGGCAATACAGCGAGCGGCAACCCGATGGTGGGGGAGCTGGCGAAGTTAAACCTGACTCTAGAGCCAATGCGCAAATTCAGGCGCACTCCGTT      >  SRR4302541.5608532/1‑94 (MQ=60)
                                                                                        CCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTT      >  SRR4302541.665334/1‑94 (MQ=60)
                                                                                        CCGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTT      <  SRR4302541.8224071/94‑1 (MQ=60)
                                                                                         CGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTT     >  SRR4302541.318803/1‑94 (MQ=60)
                                                                                         CGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTT     <  SRR4302541.7427106/94‑1 (MQ=60)
                                                                                         CGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTT     >  SRR4302541.1348871/1‑94 (MQ=60)
                                                                                         CGGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTT     <  SRR4302541.5477812/94‑1 (MQ=60)
                                                                                          GGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTTA    <  SRR4302541.3836924/94‑1 (MQ=60)
                                                                                          GGCAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTTA    >  SRR4302541.7725142/1‑94 (MQ=60)
                                                                                            CAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTTAGC  >  SRR4302541.7726652/1‑94 (MQ=60)
                                                                                            CAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTTAGC  <  SRR4302541.5301026/94‑1 (MQ=60)
                                                                                            CAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTTAGC  >  SRR4302541.6036391/1‑94 (MQ=60)
                                                                                            CAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACAGGACTTCAGAGACAATGCGCAAATTCAGGCGCAATCCGATTAGC  >  SRR4302541.6036392/1‑94 (MQ=60)
                                                                                            |                                                                                             
GGGCGGCTCAGCAAGGTGGCGAAATATTGCAGGCTGATAACCAATCCTGCCCAGAAGGCGCTAAAGCCCATCACATCATGGACATAGCCCGGTAATACAGCGAGCGGCAACCCGATGGTGAGGTAGCTGGCGAAGTTAAACATGACTATAGAGACAATGCGCAAATTCAGGCGCAATCCGTTTAGC  >  NC_000913/3609153‑3609338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑