Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,682,619 A→G R199R (CGT→CGC)  yhjK ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,682,6190AG99.2% 1303.9 / ‑1.5 387R199R (CGT→CGC) yhjKhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/2);  new base G (170/214);  total (171/216)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.80e-01

Only 100 of 398 total aligned reads displayed.

TTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAG  >  NC_000913/3682527‑3682708
                                                                                            |                                                                                         
   tCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGgcgc                                                                                        >  1:628606/1‑93 (MQ=255)
     gttctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCgg                                                                                      >  1:8756842/1‑93 (MQ=255)
     gttctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCgg                                                                                      <  1:3618939/93‑1 (MQ=255)
      ttctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCgga                                                                                     >  2:7613990/1‑92 (MQ=255)
      ttctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGt                                                                                     >  2:8422549/1‑93 (MQ=255)
      ttctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGt                                                                                     >  1:6787915/1‑93 (MQ=255)
      ttctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGt                                                                                     >  2:3432971/1‑93 (MQ=255)
      ttctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGt                                                                                     >  1:2661377/1‑93 (MQ=255)
      ttctgttctTCATAATGGCGCTGCAGCAATTGCTGCTTGAGGTTGTAACTGCGCACCAACATCCCGATTTCATCGTCCTGATGCAGGCGCGGt                                                                                     <  1:9643/93‑1 (MQ=255)
       tctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTa                                                                                    >  1:3224406/1‑93 (MQ=255)
       tctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTa                                                                                    >  1:5446923/1‑93 (MQ=255)
        ctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTaa                                                                                   <  1:6938661/93‑1 (MQ=255)
        ctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTaa                                                                                   <  2:801747/93‑1 (MQ=255)
         tgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTACCTGGGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAAt                                                                                  <  2:5437821/93‑1 (MQ=255)
         tgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAAt                                                                                  <  1:2218662/93‑1 (MQ=255)
           ttcttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGc                                                                                >  2:6316536/1‑93 (MQ=255)
             cttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCa                                                                              >  2:212967/1‑93 (MQ=255)
              ttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAg                                                                             >  1:2434550/1‑93 (MQ=255)
               tcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGt                                                                            <  1:3673143/93‑1 (MQ=255)
                 aTAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTg                                                                          <  1:7727440/93‑1 (MQ=255)
                 aTAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTg                                                                          <  1:3982514/93‑1 (MQ=255)
                 aTAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTg                                                                          <  2:6764849/93‑1 (MQ=255)
                 aTAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTg                                                                          <  1:8181043/93‑1 (MQ=255)
                  tAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCTTCCTGATGCAGGCGCGGTAATGCCAGTTgg                                                                         <  2:1647834/93‑1 (MQ=255)
                  tAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTgg                                                                         >  1:7292885/1‑93 (MQ=255)
                  tAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTgg                                                                         >  1:4195042/1‑93 (MQ=255)
                  tAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTgg                                                                         <  1:1335990/93‑1 (MQ=255)
                   aaTGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGt                                                                        <  1:5647624/93‑1 (MQ=255)
                    aTGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTg                                                                       >  2:5962316/1‑93 (MQ=255)
                     tGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTgc                                                                      >  2:1760279/1‑92 (MQ=255)
                      ggCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGAc                                                                     <  1:7386546/93‑1 (MQ=255)
                       gcgcTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGAcc                                                                    >  2:316091/1‑93 (MQ=255)
                         gcTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGGAATGCCAGTTGGTGACcaa                                                                  >  1:1203261/1‑93 (MQ=255)
                          cTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGCCcaac                                                                 >  2:2690549/1‑93 (MQ=255)
                           tGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaaca                                                                <  2:222618/93‑1 (MQ=255)
                            gcagcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaacaa                                                               >  1:3188556/1‑93 (MQ=255)
                            gcagcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaacaa                                                               <  2:2559010/93‑1 (MQ=255)
                            gcagcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaacaa                                                               >  2:6964888/1‑93 (MQ=255)
                            gcagcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaacaa                                                               <  1:8332034/93‑1 (MQ=255)
                             cagcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAg                                                              >  1:7621589/1‑93 (MQ=255)
                              agcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGc                                                             >  2:6575418/1‑93 (MQ=255)
                               gcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCt                                                            >  2:5708541/1‑93 (MQ=255)
                                caATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTc                                                           <  2:4978035/93‑1 (MQ=255)
                                  aTTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCt                                                         <  2:6097197/93‑1 (MQ=255)
                                  aTTGCTGGTTGAGGTTGTAAATGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCt                                                         >  2:7387803/1‑93 (MQ=255)
                                   ttGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCtt                                                        <  1:8559673/93‑1 (MQ=255)
                                    tGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTg                                                       <  2:7076160/93‑1 (MQ=255)
                                    tGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTg                                                       <  2:3517325/93‑1 (MQ=255)
                                      cTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGc                                                     >  1:1986977/1‑93 (MQ=255)
                                      cTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGc                                                     <  1:3377749/93‑1 (MQ=255)
                                        ggTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTg                                                   >  1:2900864/1‑93 (MQ=255)
                                         gTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCATGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTgg                                                  >  1:8451851/1‑93 (MQ=255)
                                         gTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTgg                                                  <  1:300800/93‑1 (MQ=255)
                                           tGAGGTTGTAACTGCGCTCCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGa                                                <  1:7810268/93‑1 (MQ=255)
                                           tGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTTATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGa                                                >  2:1917456/1‑93 (MQ=255)
                                           tGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGa                                                >  2:4685655/1‑93 (MQ=255)
                                           tGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGa                                                <  1:7507703/93‑1 (MQ=255)
                                            gAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAt                                               <  1:5022952/93‑1 (MQ=255)
                                            gAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGAGACCAACAAGCTCCTTGGCTGGGAt                                               <  2:5159797/93‑1 (MQ=255)
                                             aGGTTGTAACTGCGCACAAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATg                                              >  1:7153930/1‑93 (MQ=255)
                                               gTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGc                                            >  1:4265953/1‑93 (MQ=255)
                                                ttGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCg                                           >  2:1135210/1‑93 (MQ=255)
                                                  gTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGCGACCAACAAGCTCCTTGGCTGGGATGGCGtt                                         >  1:5747297/1‑93 (MQ=255)
                                                   tAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTa                                        <  2:2450111/93‑1 (MQ=255)
                                                      cTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGt                                     <  2:935080/93‑1 (MQ=255)
                                                       tGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGtt                                    >  1:8627886/1‑93 (MQ=255)
                                                        gcgcACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTc                                   >  1:2303657/1‑93 (MQ=255)
                                                        gcgcACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTc                                   >  2:647458/1‑93 (MQ=255)
                                                             ccAACATCCCGATTTCATCGTCCTGATGCAGGCTCTGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAg                              <  1:6707474/93‑1 (MQ=255)
                                                               accATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCAAGTTGGTGACCAACAAGCTCCTTGGCTGCGATGGCGTTAAGCTCGCGAGCa                            >  2:7171218/3‑93 (MQ=255)
                                                                aCATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCaa                           <  1:465855/93‑1 (MQ=255)
                                                                 cATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAat                          <  2:3664794/93‑1 (MQ=255)
                                                                  aTACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAata                         >  1:611585/1‑93 (MQ=255)
                                                                  aTACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAata                         <  2:4807948/93‑1 (MQ=255)
                                                                    aCCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATAtt                       >  1:1494294/1‑93 (MQ=255)
                                                                    aCCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATAtt                       <  2:1296366/93‑1 (MQ=255)
                                                                     ccGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTg                      <  1:1011875/93‑1 (MQ=255)
                                                                      cGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGc                     <  1:6381015/93‑1 (MQ=255)
                                                                      cGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGc                     <  1:5579214/93‑1 (MQ=255)
                                                                       gATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCg                    >  2:3917741/1‑93 (MQ=255)
                                                                        aTTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGt                   >  2:5346324/1‑93 (MQ=255)
                                                                        aTTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGt                   <  2:1417085/93‑1 (MQ=255)
                                                                         tttCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTa                  <  2:1547157/93‑1 (MQ=255)
                                                                           tCATCGTCCTGATGCATGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGGTAAGTTCGCGAGCAATATTGCGTAAc                >  2:7807524/1‑93 (MQ=255)
                                                                           tCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAAc                <  1:5933476/93‑1 (MQ=255)
                                                                           tCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAAc                <  2:8288891/93‑1 (MQ=255)
                                                                             aTCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGCGCAATATTGCGTAACgg              >  1:4074445/1‑93 (MQ=255)
                                                                             aTCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACgg              >  1:4789688/1‑93 (MQ=255)
                                                                             aTCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACgg              <  1:7942602/93‑1 (MQ=255)
                                                                               cGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGAt            >  2:3005253/1‑93 (MQ=255)
                                                                               cGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGAt            <  1:4914672/93‑1 (MQ=255)
                                                                               cGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGAt            <  1:5320951/93‑1 (MQ=255)
                                                                                  ccTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCa         >  2:8726714/1‑93 (MQ=255)
                                                                                   cTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCaa        >  2:3080816/1‑93 (MQ=255)
                                                                                     gATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCaaaa      <  2:3296538/93‑1 (MQ=255)
                                                                                     gATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCaaaa      >  2:4339157/1‑93 (MQ=255)
                                                                                      aTGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAAt     >  2:4546079/1‑93 (MQ=255)
                                                                                       tGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATc    >  1:1381001/1‑93 (MQ=255)
                                                                                       tGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATc    <  2:4131598/93‑1 (MQ=255)
                                                                                        gCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCa   <  2:2829427/93‑1 (MQ=255)
                                                                                            |                                                                                         
TTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAG  >  NC_000913/3682527‑3682708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 222 total aligned reads displayed.
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  >  NC_000913/3682526‑3682711
                                                                                             |                                                                                            
ATTTTCGTTCTGTTCTTCATCATGGCGCTGCAGCAATTGCTGGATGACGATGTAACTGAGCACCAAGCTACCGATTTCATCGTCCTTATGCAGG                                                                                              >  SRR4302541.40467/1‑94 (MQ=60)
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302541.91567/1‑94 (MQ=60)
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              <  SRR4302541.2940223/94‑1 (MQ=60)
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              <  SRR4302541.4117438/94‑1 (MQ=60)
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302541.4284301/1‑94 (MQ=60)
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              <  SRR4302541.5455373/94‑1 (MQ=60)
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302541.6603303/1‑94 (MQ=60)
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302541.6424159/1‑94 (MQ=60)
 TTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGC                                                                                             <  SRR4302541.7705910/94‑1 (MQ=60)
  TTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCTCACCAACATACCGATTTCATCGTCCTGATGCAGGCG                                                                                            <  SRR4302541.782394/94‑1 (MQ=60)
  TTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCG                                                                                            <  SRR4302541.2470285/94‑1 (MQ=60)
  TTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCG                                                                                            <  SRR4302541.5135673/94‑1 (MQ=60)
  TTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCG                                                                                            <  SRR4302541.4931725/94‑1 (MQ=60)
  TTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCG                                                                                            >  SRR4302541.3841765/1‑94 (MQ=60)
   TTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGC                                                                                           >  SRR4302541.3292387/1‑94 (MQ=60)
   TTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGC                                                                                           >  SRR4302541.634511/1‑94 (MQ=60)
    TCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACTGATTTCATCGTCCTGATGCAGGCGCG                                                                                          <  SRR4302541.325672/94‑1 (MQ=60)
     CGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGG                                                                                         >  SRR4302541.8850514/1‑94 (MQ=60)
     CGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGG                                                                                         >  SRR4302541.349870/1‑94 (MQ=60)
      GTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGT                                                                                        <  SRR4302541.3655632/94‑1 (MQ=60)
      GTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGT                                                                                        >  SRR4302541.4904150/1‑94 (MQ=60)
      GTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGT                                                                                        >  SRR4302541.5826063/1‑94 (MQ=60)
      GTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGT                                                                                        >  SRR4302541.6860503/1‑94 (MQ=60)
      GTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGT                                                                                        >  SRR4302541.2687841/1‑94 (MQ=60)
      GTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGT                                                                                        >  SRR4302541.5730316/1‑94 (MQ=60)
       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       >  SRR4302541.1117107/1‑94 (MQ=60)
       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       >  SRR4302541.3256970/1‑94 (MQ=60)
       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       <  SRR4302541.2989988/94‑1 (MQ=60)
       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       >  SRR4302541.5502810/1‑94 (MQ=60)
       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCGGGTTGAGGTTGTATCTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       <  SRR4302541.2989987/94‑1 (MQ=60)
         CTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAAT                                                                                     >  SRR4302541.3625153/1‑94 (MQ=60)
         CTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAAT                                                                                     <  SRR4302541.7012680/94‑1 (MQ=60)
          TGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATG                                                                                    <  SRR4302541.6221351/94‑1 (MQ=60)
          TGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATG                                                                                    <  SRR4302541.2240175/94‑1 (MQ=60)
          TGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATG                                                                                    <  SRR4302541.2626148/94‑1 (MQ=60)
            TTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCC                                                                                  <  SRR4302541.876672/94‑1 (MQ=60)
            TTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCC                                                                                  >  SRR4302541.8835531/1‑94 (MQ=60)
            TTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCC                                                                                  <  SRR4302541.7812542/94‑1 (MQ=60)
             TCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCA                                                                                 <  SRR4302541.6858505/94‑1 (MQ=60)
             TCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCA                                                                                 <  SRR4302541.6033137/94‑1 (MQ=60)
              TTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATTCCGATTTCATCGTCCTGATGCAGGCGCGGTAATTCCAG                                                                                <  SRR4302541.6908164/94‑1 (MQ=60)
              CTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAG                                                                                >  SRR4302541.2903688/1‑94 (MQ=60)
              CTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAG                                                                                >  SRR4302541.2458659/1‑94 (MQ=60)
              CTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAG                                                                                >  SRR4302541.5053787/1‑94 (MQ=60)
              CTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGGAATGCCAG                                                                                >  SRR4302541.2458654/1‑94 (MQ=60)
               TTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGT                                                                               <  SRR4302541.1398948/94‑1 (MQ=60)
               TTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGT                                                                               >  SRR4302541.3705101/1‑94 (MQ=60)
                TCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTT                                                                              <  SRR4302541.3710379/94‑1 (MQ=60)
                 CATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTG                                                                             >  SRR4302541.3017679/1‑94 (MQ=60)
                 CATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTG                                                                             <  SRR4302541.4022123/94‑1 (MQ=60)
                 CATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTG                                                                             <  SRR4302541.8221248/94‑1 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            >  SRR4302541.7370724/1‑94 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            >  SRR4302541.5025502/1‑94 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            <  SRR4302541.5580988/94‑1 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            >  SRR4302541.4236709/1‑94 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            >  SRR4302541.5663191/1‑94 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            <  SRR4302541.4021987/94‑1 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            >  SRR4302541.7865789/1‑94 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            <  SRR4302541.8270364/94‑1 (MQ=60)
                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            <  SRR4302541.7809656/94‑1 (MQ=60)
                   TAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGT                                                                           <  SRR4302541.1349141/94‑1 (MQ=60)
                   TAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGT                                                                           <  SRR4302541.8682091/94‑1 (MQ=60)
                   TAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGT                                                                           <  SRR4302541.7904355/94‑1 (MQ=60)
                   TAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGT                                                                           >  SRR4302541.4199476/1‑94 (MQ=60)
                    AATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTG                                                                          >  SRR4302541.8317183/1‑94 (MQ=60)
                    AATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTG                                                                          >  SRR4302541.7087252/1‑94 (MQ=60)
                    AATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTG                                                                          <  SRR4302541.5705335/94‑1 (MQ=60)
                     ATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGA                                                                         <  SRR4302541.8821998/94‑1 (MQ=60)
                       GGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACC                                                                       <  SRR4302541.7465528/94‑1 (MQ=60)
                        GCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCA                                                                      >  SRR4302541.4820568/1‑94 (MQ=60)
                         CGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGGAATGCCAGTTGGTGACCAA                                                                     >  SRR4302541.1214945/1‑94 (MQ=60)
                           CTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACA                                                                   <  SRR4302541.7398155/94‑1 (MQ=60)
                            TGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAA                                                                  >  SRR4302541.2897302/1‑94 (MQ=60)
                            TGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAA                                                                  >  SRR4302541.5804156/1‑94 (MQ=60)
                            TGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAA                                                                  >  SRR4302541.3220773/1‑94 (MQ=60)
                             GCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAG                                                                 >  SRR4302541.7702965/1‑94 (MQ=60)
                             GCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAC                                                                 <  SRR4302541.8422529/94‑1 (MQ=60)
                               AGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCT                                                               <  SRR4302541.91351/94‑1 (MQ=60)
                               AGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCT                                                               <  SRR4302541.7421684/94‑1 (MQ=60)
                                  AATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCT                                                            >  SRR4302541.7707662/1‑94 (MQ=60)
                                  AATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCT                                                            >  SRR4302541.3237073/1‑94 (MQ=60)
                                  AATTGCTGGTTGAGGCTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGCCCAACAAGCTCCT                                                            >  SRR4302541.4295363/1‑94 (MQ=60)
                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGTCAGTTGGTGACCAACAAGTTCCTT                                                           >  SRR4302541.7372754/1‑94 (MQ=60)
                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           <  SRR4302541.5201418/94‑1 (MQ=60)
                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           <  SRR4302541.4906057/94‑1 (MQ=60)
                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           >  SRR4302541.2152610/1‑94 (MQ=60)
                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           <  SRR4302541.7650675/94‑1 (MQ=60)
                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           >  SRR4302541.325031/1‑94 (MQ=60)
                                    TTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTG                                                          <  SRR4302541.5872954/94‑1 (MQ=60)
                                    TTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTG                                                          <  SRR4302541.8651643/94‑1 (MQ=60)
                                    TTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTG                                                          <  SRR4302541.5401558/94‑1 (MQ=60)
                                    TTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTG                                                          <  SRR4302541.3674965/94‑1 (MQ=60)
                                     TGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGG                                                         <  SRR4302541.6537631/94‑1 (MQ=60)
                                     TGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGG                                                         <  SRR4302541.4035927/94‑1 (MQ=60)
                                     TGCTGGGTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGG                                                         <  SRR4302541.5658219/94‑1 (MQ=60)
                                      GCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGC                                                        >  SRR4302541.134981/1‑94 (MQ=60)
                                      GCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGC                                                        <  SRR4302541.7627469/94‑1 (MQ=60)
                                       CTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCT                                                       <  SRR4302541.3411420/94‑1 (MQ=60)
                                        TGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTG                                                      >  SRR4302541.2930007/1‑94 (MQ=60)
                                         GGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCATGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGG                                                     >  SRR4302541.8543075/1‑94 (MQ=60)
                                         GGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACACGCTCCTTGGCTGG                                                     >  SRR4302541.1274337/1‑94 (MQ=60)
                                         GGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGG                                                     >  SRR4302541.8543077/1‑94 (MQ=60)
                                         GGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGG                                                     <  SRR4302541.8541503/94‑1 (MQ=60)
                                         GGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGG                                                     <  SRR4302541.8185223/94‑1 (MQ=60)
                                          gtctgtcttgcatCTGCGCAGCAACATACCCATTTCGTCGTCCTGATGTAGGCGCGGTAATGCCATTTGGTGACCAACAAGCTCCTTGGCTGCG                                                    <  SRR4302541.303439/81‑1 (MQ=60)
                                          GTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGG                                                    <  SRR4302541.303440/94‑1 (MQ=60)
                                          GTTGAGGTTGGAACTGCGCACCAACATTCCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGG                                                    <  SRR4302541.7284840/94‑1 (MQ=60)
                                           TTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGA                                                   <  SRR4302541.6837409/94‑1 (MQ=60)
                                            TGAGGTTGTAACTGCGCTCCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  <  SRR4302541.7894654/94‑1 (MQ=60)
                                            TGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  <  SRR4302541.6892364/94‑1 (MQ=60)
                                            TGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  <  SRR4302541.7587949/94‑1 (MQ=60)
                                            TGAGGTTGTAACTGCGCACCAACATACAGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  >  SRR4302541.434801/1‑94 (MQ=60)
                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 <  SRR4302541.7808711/94‑1 (MQ=60)
                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 <  SRR4302541.3657349/94‑1 (MQ=60)
                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 >  SRR4302541.406220/1‑94 (MQ=60)
                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 >  SRR4302541.1865824/1‑94 (MQ=60)
                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 <  SRR4302541.7504244/94‑1 (MQ=60)
                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 <  SRR4302541.5074596/94‑1 (MQ=60)
                                             GAGGTTGTAACTGCGCACAAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 >  SRR4302541.7230194/1‑94 (MQ=60)
                                               GGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGC                                               >  SRR4302541.4308589/1‑94 (MQ=60)
                                                GTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCG                                              >  SRR4302541.8071165/1‑94 (MQ=60)
                                                  TGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTT                                            <  SRR4302541.6433108/94‑1 (MQ=60)
                                                  TGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTT                                            <  SRR4302541.1023381/94‑1 (MQ=60)
                                                  TGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTT                                            >  SRR4302541.1240494/1‑94 (MQ=60)
                                                  TGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGCGACCAACAAGCTCCTTGGCTGGGATGGCGTT                                            >  SRR4302541.5805824/1‑94 (MQ=60)
                                                   GTACCTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTA                                           <  SRR4302541.6759946/94‑1 (MQ=60)
                                                   GTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTA                                           >  SRR4302541.7607502/1‑94 (MQ=60)
                                                   GTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTA                                           >  SRR4302541.4664351/1‑94 (MQ=60)
                                                   GTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTA                                           <  SRR4302541.8671829/94‑1 (MQ=60)
                                                   GTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTA                                           <  SRR4302541.4253357/94‑1 (MQ=60)
                                                    TAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAA                                          <  SRR4302541.5027181/94‑1 (MQ=60)
                                                    TAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAA                                          <  SRR4302541.2404325/94‑1 (MQ=60)
                                                    TAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAA                                          <  SRR4302541.2292696/94‑1 (MQ=60)
                                                     AACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAG                                         >  SRR4302541.1375071/1‑94 (MQ=60)
                                                     AACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAG                                         <  SRR4302541.1325563/94‑1 (MQ=60)
                                                      ACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCAAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGT                                        <  SRR4302541.1427081/94‑1 (MQ=60)
                                                       CTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTT                                       >  SRR4302541.8720358/1‑94 (MQ=60)
                                                       CTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTT                                       >  SRR4302541.6139715/1‑94 (MQ=60)
                                                        TGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTTACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTC                                      <  SRR4302541.6244010/94‑1 (MQ=60)
                                                        TGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTC                                      >  SRR4302541.2326007/1‑94 (MQ=60)
                                                         GCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCG                                     <  SRR4302541.5519936/94‑1 (MQ=60)
                                                          CGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGC                                    >  SRR4302541.7954750/1‑94 (MQ=60)
                                                          CGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGC                                    >  SRR4302541.6736399/1‑94 (MQ=60)
                                                            CACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGA                                  >  SRR4302541.7893106/1‑94 (MQ=60)
                                                            CACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGA                                  <  SRR4302541.8358252/94‑1 (MQ=60)
                                                             CCCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAG                                 <  SRR4302541.6939831/94‑1 (MQ=60)
                                                             ACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAG                                 <  SRR4302541.4754752/94‑1 (MQ=60)
                                                             ACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGGGACCAAAAAGCTCCTTGGCTGGGATGGCGTTAAGTTGGCGAG                                 >  SRR4302541.5570055/1‑94 (MQ=60)
                                                              CCAACATCCCGATTTCATCGTCCTGATGCAGGCTCTGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGC                                <  SRR4302541.6778312/94‑1 (MQ=60)
                                                              CCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGC                                <  SRR4302541.3249248/94‑1 (MQ=60)
                                                               CAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGTCGTTAAGTTCGCGAGCA                               >  SRR4302541.3751195/1‑94 (MQ=60)
                                                                 ACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAAT                             <  SRR4302541.470293/94‑1 (MQ=60)
                                                                 ACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAAT                             <  SRR4302541.6271231/94‑1 (MQ=60)
                                                                 ACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAAT                             <  SRR4302541.2321627/94‑1 (MQ=60)
                                                                 ACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAAT                             >  SRR4302541.3193848/1‑94 (MQ=60)
                                                                 ACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAAT                             >  SRR4302541.3218483/1‑94 (MQ=60)
                                                                  CATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATA                            <  SRR4302541.5481425/94‑1 (MQ=60)
                                                                  CATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATA                            >  SRR4302541.617332/1‑94 (MQ=60)
                                                                   ATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATAT                           <  SRR4302541.1946020/94‑1 (MQ=60)
                                                                    TACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATT                          >  SRR4302541.1509042/1‑94 (MQ=60)
                                                                     ACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTG                         <  SRR4302541.4287970/94‑1 (MQ=60)
                                                                      CCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGC                        <  SRR4302541.1021239/94‑1 (MQ=60)
                                                                      CCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGC                        <  SRR4302541.5085646/94‑1 (MQ=60)
                                                                       CGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCG                       <  SRR4302541.5636331/94‑1 (MQ=60)
                                                                       CGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCG                       <  SRR4302541.7319185/94‑1 (MQ=60)
                                                                       CGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCG                       >  SRR4302541.14760/1‑94 (MQ=60)
                                                                       CGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCG                       <  SRR4302541.6446194/94‑1 (MQ=60)
                                                                        GATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGT                      <  SRR4302541.6091047/94‑1 (MQ=60)
                                                                        GATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGCATGGCGTTAAGTTCGCGAGCAATATTGCGT                      <  SRR4302541.34546/94‑1 (MQ=60)
                                                                        GATTTCATCGTCCTGATGCAGGCGCGGTAATGCAAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGT                      <  SRR4302541.8560831/94‑1 (MQ=60)
                                                                         ATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTA                     <  SRR4302541.5745274/94‑1 (MQ=60)
                                                                          TTTCATCGTCCTGATGCAGGCGCGGTAATCCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAA                    <  SRR4302541.728235/94‑1 (MQ=60)
                                                                           TTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAAC                   >  SRR4302541.2649163/1‑94 (MQ=60)
                                                                           TTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAAC                   <  SRR4302541.1762290/94‑1 (MQ=60)
                                                                           TTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAAC                   <  SRR4302541.206975/94‑1 (MQ=60)
                                                                            TCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACG                  <  SRR4302541.5993917/94‑1 (MQ=60)
                                                                            TCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACG                  <  SRR4302541.7040573/94‑1 (MQ=60)
                                                                             CATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGCGCAATATTGCGTAACGG                 >  SRR4302541.4114661/1‑94 (MQ=60)
                                                                             CATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGG                 >  SRR4302541.4838562/1‑94 (MQ=60)
                                                                              ATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGA                <  SRR4302541.8030083/94‑1 (MQ=60)
                                                                                CGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATG              <  SRR4302541.2149061/94‑1 (MQ=60)
                                                                                CGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATG              <  SRR4302541.4964828/94‑1 (MQ=60)
                                                                                CGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATG              <  SRR4302541.912220/94‑1 (MQ=60)
                                                                                CGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATG              <  SRR4302541.5375722/94‑1 (MQ=60)
                                                                                 GTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGC             >  SRR4302541.2301884/1‑94 (MQ=60)
                                                                                 GTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGC             >  SRR4302541.8322086/1‑94 (MQ=60)
                                                                                 GTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGA             >  SRR4302541.5495963/1‑94 (MQ=60)
                                                                                   CCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAA           >  SRR4302541.475427/1‑94 (MQ=60)
                                                                                     TGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAA         >  SRR4302541.7549679/1‑94 (MQ=60)
                                                                                      GATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAAT        <  SRR4302541.8622830/94‑1 (MQ=60)
                                                                                      GATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAAT        >  SRR4302541.4206738/1‑94 (MQ=60)
                                                                                      GATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAAT        >  SRR4302541.4206739/1‑94 (MQ=60)
                                                                                       ATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATC       >  SRR4302541.1394562/1‑94 (MQ=60)
                                                                                        TGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCA      <  SRR4302541.2538510/94‑1 (MQ=60)
                                                                                        TGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCA      >  SRR4302541.6420505/1‑94 (MQ=60)
                                                                                          CAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGG    <  SRR4302541.8539853/94‑1 (MQ=60)
                                                                                           AGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGC   <  SRR4302541.860283/94‑1 (MQ=60)
                                                                                            GGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  <  SRR4302541.1701311/94‑1 (MQ=60)
                                                                                            GGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  >  SRR4302541.2567394/1‑94 (MQ=60)
                                                                                            GGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  >  SRR4302541.2638953/1‑94 (MQ=60)
                                                                                             |                                                                                            
ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  >  NC_000913/3682526‑3682711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑