Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,735,666	T→C	S181P (TCC→CCC)	malS →	alpha‑amylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,735,666	0	T	C	99.7%	1250.4 / ‑4.9	368	S181P (TCC→CCC)	malS	alpha‑amylase
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (202/165); total (203/165)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.76e-01

Only 100 of 408 total aligned reads displayed.

ATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACATCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTAC  >  NC_000913/3735576‑3735755

aTTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACAccc                                                                                         <  2:6176724/93‑1 (MQ=255)

aTTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACAccc                                                                                         >  2:5478441/1‑93 (MQ=255)

       tAGGGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCtt                                                                                  <  1:2440834/93‑1 (MQ=255)

         gTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTc                                                                                >  1:151557/1‑93 (MQ=255)

         gTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTc                                                                                <  1:3687552/93‑1 (MQ=255)

         gTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTc                                                                                >  2:4570785/1‑93 (MQ=255)

           gaagaaCGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGa                                                                              <  2:4084283/93‑1 (MQ=255)

           gaagaaCGGTCAAATAATGATACAACCCGCTACCACCAGGAACGGGTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGa                                                                              >  2:7680614/1‑93 (MQ=255)

            acgaaCGGTCAAATAATGTTCCATCCCGCTGCCCCCAGAAACTGTTTTCTCCTGCTGGAACGGGCAGAATCGGACACACCCGCCCCTTTCgtc                                                                             <  2:3554740/91‑3 (MQ=255)

            aagaaCGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGAc                                                                             >  1:8081997/1‑93 (MQ=255)

             agaaCGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACCCACCCGCCCCTTTCGACt                                                                            <  2:7227562/93‑1 (MQ=255)

             agaaCGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACt                                                                            >  2:5511584/1‑93 (MQ=255)

             agaaCGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACt                                                                            >  1:2272969/1‑93 (MQ=255)

              gaaCGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACACGCCCCTTTCGACTg                                                                           >  2:5859062/1‑93 (MQ=255)

                 cGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCa                                                                        >  2:6090642/1‑93 (MQ=255)

                  ggTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCAt                                                                       >  1:3851108/1‑93 (MQ=255)

                  cgTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCAt                                                                       <  1:1885378/92‑1 (MQ=255)

                   gTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATa                                                                      >  1:5712247/1‑93 (MQ=255)

                   gTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATa                                                                      >  1:167935/1‑93 (MQ=255)

                   gTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATa                                                                      >  1:4567335/1‑93 (MQ=255)

                    tCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATaa                                                                     <  2:8497833/93‑1 (MQ=255)

                    tCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATaa                                                                     >  1:5573652/1‑93 (MQ=255)

                    tCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATaa                                                                     <  1:7714990/93‑1 (MQ=255)

                    tCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATaa                                                                     >  1:3355672/1‑93 (MQ=255)

                    tCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATaa                                                                     <  1:3249514/93‑1 (MQ=255)

                     cAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAAc                                                                    >  1:3117217/1‑93 (MQ=255)

                      aaaTAATGTTACACCCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACg                                                                   <  2:1612195/93‑1 (MQ=255)

                       aataatGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGc                                                                  >  1:1045684/1‑93 (MQ=255)

                       aataatGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGc                                                                  >  2:4479614/1‑93 (MQ=255)

                         taatGTTACAACCCGCTGCCACCAGCAACGTTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCa                                                                <  2:8330252/93‑1 (MQ=255)

                             gTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGt                                                            >  2:1321446/1‑93 (MQ=255)

                              ttACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGtt                                                           >  1:709550/1‑93 (MQ=255)

                              ttACAACCCGCGGCCACCAGCAACGGTTTACTCCTGATGGAACGGGCAGAAACTGACACAACCGCCCCTTTCGACTGGCATAACGCCACGGtt                                                           >  1:4429407/1‑93 (MQ=255)

                                aCAACCCGCTGCCACCAGCAACGGTTTCCGCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTa                                                         <  1:5235014/93‑1 (MQ=255)

                                 cAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTAc                                                        <  1:4098715/93‑1 (MQ=255)

                                  caCCCGCTGCTACCACAAACGTTGAACCCCGGCAGTACCGGGCACAAACTGACACACCCGCCCCTTTCGCCTGGCATATCGCCACGGTTTACt                                                       <  2:7919986/92‑1 (MQ=255)

                                  aaCCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACt                                                       >  2:3906625/1‑93 (MQ=255)

                                   aCCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACtt                                                      <  2:510255/93‑1 (MQ=255)

                                    cccGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACttt                                                     <  2:3715929/93‑1 (MQ=255)

                                     ccGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTtg                                                    >  1:8514919/1‑93 (MQ=255)

                                     ccGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTtg                                                    <  2:7329230/93‑1 (MQ=255)

                                      cGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTtgt                                                   <  1:8682056/93‑1 (MQ=255)

                                      cGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTtgt                                                   >  1:1206421/1‑93 (MQ=255)

                                       gCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTtgtg                                                  >  1:1112949/1‑93 (MQ=255)

                                       ccTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTtgtg                                                  <  1:6577231/92‑1 (MQ=255)

                                        cTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGc                                                 <  1:6496977/93‑1 (MQ=255)

                                        cTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGc                                                 >  1:2855747/1‑93 (MQ=255)

                                         tGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCt                                                <  2:5759620/93‑1 (MQ=255)

                                            caccaGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACTCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGAc                                             <  1:6758608/93‑1 (MQ=255)

                                             cccaGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACa                                            <  2:2397026/92‑1 (MQ=255)

                                             accaGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCTACTGGCATAACGCCACGGTTTACTTTGTGCTGACa                                            >  2:220322/1‑93 (MQ=255)

                                              ccaGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAg                                           >  1:6003957/1‑93 (MQ=255)

                                               tagtaaCGTTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCTCTTTCGACTGGCATAACGCCACGGTTTTCTCTGTGcagacaga                                          >  2:7825162/5‑93 (MQ=255)

                                               caGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGa                                          >  1:5825109/1‑93 (MQ=255)

                                               caGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGa                                          <  2:4149489/93‑1 (MQ=255)

                                                gggaaCGGTTTGCTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAt                                         <  2:8664145/90‑1 (MQ=255)

                                                aGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAt                                         <  2:1445025/93‑1 (MQ=255)

                                                aGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAt                                         >  2:2049561/1‑93 (MQ=255)

                                                aGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAt                                         >  1:2760041/1‑93 (MQ=255)

                                                 gCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAtg                                        >  1:1990717/1‑92 (MQ=255)

                                                    aCGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGtt                                     <  2:3061108/93‑1 (MQ=255)

                                                     cGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGttt                                    <  1:6092594/93‑1 (MQ=255)

                                                      ggTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTc                                   >  1:135165/1‑93 (MQ=255)

                                                       gTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCg                                  >  2:1811667/1‑93 (MQ=255)

                                                       gTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCg                                  <  2:6775879/93‑1 (MQ=255)

                                                             tCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACg                            >  2:6581125/1‑93 (MQ=255)

                                                             tCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACg                            >  2:1235629/1‑93 (MQ=255)

                                                             tCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACg                            >  1:348129/1‑93 (MQ=255)

                                                              ccTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACgg                           <  1:7277790/93‑1 (MQ=255)

                                                               ctgctgGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGc                          >  1:4744083/1‑93 (MQ=255)

                                                                tgctgGAACGGGCAGAAACTGACACATCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCg                         >  2:8042502/1‑93 (MQ=255)

                                                                tgctgGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCg                         >  2:2547434/1‑93 (MQ=255)

                                                                  ctgGGACGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGAt                       <  1:6713542/93‑1 (MQ=255)

                                                                   tgGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATc                      <  2:4367959/93‑1 (MQ=255)

                                                                   tgGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATc                      >  2:4912793/1‑93 (MQ=255)

                                                                    ggAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATcc                     >  2:3316185/1‑93 (MQ=255)

                                                                     gagcGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATccc                    <  1:835402/90‑1 (MQ=255)

                                                                      aaCGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCa                   <  1:4899953/93‑1 (MQ=255)

                                                                       aCGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAg                  <  1:752267/93‑1 (MQ=255)

                                                                        cGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGt                 <  1:4303111/93‑1 (MQ=255)

                                                                        cGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGt                 >  1:5104601/1‑93 (MQ=255)

                                                                        agggCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGt                 <  2:6852179/92‑1 (MQ=255)

                                                                         gggCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTa                >  1:2561619/1‑93 (MQ=255)

                                                                         gggCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTa                >  1:4995076/1‑93 (MQ=255)

                                                                         gggCAGAAACGCACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTCCTTTGTGCTGACAGATAGTTTCGAAAACGGCGATCCCAGTa                <  2:6273607/93‑1 (MQ=255)

                                                                          ggCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTaa               <  1:2612703/93‑1 (MQ=255)

                                                                           gCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAAt              <  2:8757120/93‑1 (MQ=255)

                                                                            cAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATg             >  1:6360197/1‑93 (MQ=255)

                                                                             aGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGa            <  2:6946677/93‑1 (MQ=255)

                                                                             aGAAACTCACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAGCGGTTGGAAAACGGCGATCCCAGTAATgc            >  2:2759007/1‑92 (MQ=255)

                                                                              gAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGAc           >  2:710330/1‑93 (MQ=255)

                                                                                aaCTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCa         <  2:5193728/93‑1 (MQ=255)

                                                                                aaCTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCa         >  1:2888703/1‑93 (MQ=255)

                                                                                 aCTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCag        >  2:2921119/1‑93 (MQ=255)

                                                                                  cTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACATTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCaga       >  2:7446946/1‑93 (MQ=255)

                                                                                   tGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCagag      >  1:5368472/1‑93 (MQ=255)

                                                                                    gACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGt     <  2:1712387/93‑1 (MQ=255)

                                                                                     acacacCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGtt    <  1:6912778/93‑1 (MQ=255)

                                                                                      cccctCCGCCCCTCTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTa   <  2:5914333/89‑1 (MQ=255)

                                                                                       acacCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTAc  <  2:3826493/93‑1 (MQ=255)

ATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACATCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTAC  >  NC_000913/3735576‑3735755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 224 total aligned reads displayed.

AAATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACATCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGGAC  >  NC_000913/3735574‑3735759

AAATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACC                                                                                              <  SRR4302541.3387929/94‑1 (MQ=60)

AAATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACC                                                                                              <  SRR4302541.5294948/94‑1 (MQ=60)

 AATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCC                                                                                             >  SRR4302541.1085555/1‑94 (MQ=60)

 AATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCC                                                                                             <  SRR4302541.3983912/94‑1 (MQ=60)

 AATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCC                                                                                             >  SRR4302541.7320685/1‑94 (MQ=60)

  ATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCG                                                                                            >  SRR4302541.1833289/1‑94 (MQ=60)

  ATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCG                                                                                            <  SRR4302541.1639366/94‑1 (MQ=60)

     GCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCC                                                                                         <  SRR4302541.8468744/94‑1 (MQ=60)

      CGTTAGTGAAGAACGGTCAATTAATGTTACAACTCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACGGACACACCCGCCCC                                                                                        >  SRR4302541.7914671/1‑94 (MQ=60)

       GATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTTACACACCCGCCCCT                                                                                       >  SRR4302541.6101415/1‑94 (MQ=60)

       GATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCT                                                                                       >  SRR4302541.3736884/1‑94 (MQ=60)

       GATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCT                                                                                       >  SRR4302541.4260389/1‑94 (MQ=60)

       GATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCT                                                                                       >  SRR4302541.3646057/1‑94 (MQ=60)

        ATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTT                                                                                      >  SRR4302541.1553160/1‑94 (MQ=60)

        ATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTT                                                                                      <  SRR4302541.2515004/94‑1 (MQ=60)

        ATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTT                                                                                      <  SRR4302541.6081121/94‑1 (MQ=60)

        ATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTT                                                                                      <  SRR4302541.8103835/94‑1 (MQ=60)

        ATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACAGGCAGAAACTGACACACCCGCCCCTT                                                                                      <  SRR4302541.6794478/94‑1 (MQ=60)

         TAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTT                                                                                     <  SRR4302541.5416149/94‑1 (MQ=60)

         TAGGGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTT                                                                                     <  SRR4302541.2465036/94‑1 (MQ=60)

           GTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGACCGGGCAGAAACTGACACACCCGCCCCTTTCG                                                                                   <  SRR4302541.3309196/94‑1 (MQ=60)

           GTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCG                                                                                   >  SRR4302541.4608323/1‑94 (MQ=60)

           GTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCG                                                                                   <  SRR4302541.3724871/94‑1 (MQ=60)

           ATGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCG                                                                                   <  SRR4302541.3017170/94‑1 (MQ=60)

            TGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGA                                                                                  >  SRR4302541.279172/1‑94 (MQ=60)

             GAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGAC                                                                                 >  SRR4302541.8170637/1‑94 (MQ=60)

              AAGAACGGTCAAATAATTTTACAACCCGCCGCCCCCAGCAACGGTTTTCCCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACT                                                                                <  SRR4302541.5213761/94‑1 (MQ=60)

              AAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACT                                                                                >  SRR4302541.1180120/1‑94 (MQ=60)

              AAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACT                                                                                >  SRR4302541.6948431/1‑94 (MQ=60)

              AAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACT                                                                                <  SRR4302541.5060077/94‑1 (MQ=60)

              AAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACT                                                                                >  SRR4302541.2294945/1‑94 (MQ=60)

              AAGAACGGGCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGCAACTGAAACACCCGCCCCTTTCCACT                                                                                >  SRR4302541.6241878/1‑94 (MQ=60)

               agacgGGTCAAATAATGTTACAACCCGCTTCCACTCCCAACGGTTTTCTCCTGGTGGAACGGGCAGCAACTGACACCCCCGCCCCTTTCGACTG                                                                               <  SRR4302541.6571999/89‑1 (MQ=44)

               AGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTG                                                                               <  SRR4302541.4770258/94‑1 (MQ=60)

               AGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTG                                                                               >  SRR4302541.6766650/1‑94 (MQ=60)

                 AACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTtgt                                                                             >  SRR4302541.6609999/1‑91 (MQ=60)

                 AACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGC                                                                             >  SRR4302541.8464227/1‑94 (MQ=60)

                 AACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGC                                                                             >  SRR4302541.6610000/1‑94 (MQ=60)

                  ACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCA                                                                            <  SRR4302541.5728389/94‑1 (MQ=60)

                   CGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCAT                                                                           >  SRR4302541.2236933/1‑94 (MQ=60)

                   CGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCAT                                                                           >  SRR4302541.3889872/1‑94 (MQ=60)

                   CGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCAT                                                                           >  SRR4302541.7032290/1‑94 (MQ=60)

                   CGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCAT                                                                           >  SRR4302541.7605081/1‑94 (MQ=60)

                   CGATCAAATAATTTCACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCAT                                                                           <  SRR4302541.3274595/94‑1 (MQ=60)

                    GGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATA                                                                          >  SRR4302541.169190/1‑94 (MQ=60)

                    GGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATA                                                                          >  SRR4302541.4613582/1‑94 (MQ=60)

                    GGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATA                                                                          >  SRR4302541.5770492/1‑94 (MQ=60)

                    GGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATA                                                                          >  SRR4302541.6926226/1‑94 (MQ=60)

                     GTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAA                                                                         <  SRR4302541.1999560/94‑1 (MQ=60)

                     GTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAA                                                                         >  SRR4302541.3389171/1‑94 (MQ=60)

                      TCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAAC                                                                        <  SRR4302541.7797052/94‑1 (MQ=60)

                      TCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAAC                                                                        >  SRR4302541.4659575/1‑94 (MQ=60)

                      TCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAAC                                                                        <  SRR4302541.3282316/94‑1 (MQ=60)

                       CAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACG                                                                       >  SRR4302541.2727330/1‑94 (MQ=60)

                       CAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACG                                                                       >  SRR4302541.5403633/1‑94 (MQ=60)

                       CAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACG                                                                       >  SRR4302541.8417279/1‑94 (MQ=60)

                       CAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACC                                                                       >  SRR4302541.4595222/1‑94 (MQ=60)

                        AAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGC                                                                      >  SRR4302541.1055382/1‑94 (MQ=60)

                         AATATTTTTACACCCCGCTGCCACCAGAAACGGTTTCCTCCTGCTGGAACGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCC                                                                     <  SRR4302541.7788297/94‑1 (MQ=60)

                         AATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCC                                                                     >  SRR4302541.3866960/1‑94 (MQ=60)

                         AATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCC                                                                     >  SRR4302541.8860140/1‑94 (MQ=60)

                         AATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCC                                                                     >  SRR4302541.6703670/1‑94 (MQ=60)

                           TAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCAC                                                                   <  SRR4302541.3227090/94‑1 (MQ=60)

                           TAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCAC                                                                   <  SRR4302541.1381453/94‑1 (MQ=60)

                           TAATGCTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGCGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCAC                                                                   >  SRR4302541.2108695/1‑94 (MQ=60)

                           AAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCGGCTGGAACGGGCATAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCAC                                                                   <  SRR4302541.6378373/94‑1 (MQ=60)

                            AATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACG                                                                  >  SRR4302541.2911399/1‑94 (MQ=60)

                            AATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGCCAGAAACTGAAACACCCGCCCCTTCCGACTGGCATAACGCCACG                                                                  >  SRR4302541.2911401/1‑94 (MQ=60)

                             ATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGG                                                                 >  SRR4302541.4803966/1‑94 (MQ=60)

                             ATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGG                                                                 <  SRR4302541.3094066/94‑1 (MQ=60)

                              TGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGT                                                                <  SRR4302541.4997447/94‑1 (MQ=60)

                               GTTACACCCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTT                                                               <  SRR4302541.1996177/94‑1 (MQ=60)

                               GTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTT                                                               >  SRR4302541.6623449/1‑94 (MQ=60)

                               GTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTT                                                               >  SRR4302541.4554164/1‑94 (MQ=60)

                               GTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTT                                                               >  SRR4302541.716230/1‑94 (MQ=60)

                               GTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTT                                                               <  SRR4302541.4660123/94‑1 (MQ=60)

                               GTTACAACCCGCGGCCACCAGCAACGGTTTACTCCTGATGGAACGGGCAGAAACTGACACAACCGCCCCTTTCGACTGGCATAACGCCACGGTT                                                               >  SRR4302541.4473914/1‑94 (MQ=60)

                                  ACAACCCGCTGCCACCAGCAACGGTTTACTCGTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTAC                                                            >  SRR4302541.8671454/1‑94 (MQ=60)

                                  ACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTAC                                                            >  SRR4302541.5204774/1‑94 (MQ=60)

                                   CACCCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACT                                                           <  SRR4302541.1070701/94‑1 (MQ=60)

                                   CAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACT                                                           <  SRR4302541.4139179/94‑1 (MQ=60)

                                   CAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACT                                                           <  SRR4302541.6152016/94‑1 (MQ=60)

                                    AACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTT                                                          <  SRR4302541.1298760/94‑1 (MQ=60)

                                     ACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATACCGCCACGGTTTACTCT                                                         >  SRR4302541.5994584/1‑94 (MQ=60)

                                     ACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTT                                                         >  SRR4302541.4154769/1‑94 (MQ=60)

                                     ACCCGCTGCCACCAGCAACAGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTT                                                         <  SRR4302541.4172219/94‑1 (MQ=60)

                                      CCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTG                                                        >  SRR4302541.8606578/1‑94 (MQ=60)

                                      CCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTG                                                        >  SRR4302541.1276343/1‑94 (MQ=60)

                                       CCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACGCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGT                                                       >  SRR4302541.5178835/1‑94 (MQ=60)

                                       CCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGT                                                       <  SRR4302541.3715667/94‑1 (MQ=60)

                                        CGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTG                                                      <  SRR4302541.8774956/94‑1 (MQ=60)

                                        CGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTG                                                      >  SRR4302541.1123403/1‑94 (MQ=60)

                                        CGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTG                                                      >  SRR4302541.7396585/1‑94 (MQ=60)

                                        CGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGGTTACTTTGTG                                                      >  SRR4302541.7086803/1‑94 (MQ=60)

                                         GCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGC                                                     >  SRR4302541.2884454/1‑94 (MQ=60)

                                         CCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGC                                                     <  SRR4302541.6644536/94‑1 (MQ=60)

                                          CTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCT                                                    <  SRR4302541.6563219/94‑1 (MQ=60)

                                            GCCCCCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGA                                                  <  SRR4302541.2304908/94‑1 (MQ=60)

                                            GCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGA                                                  <  SRR4302541.1310017/94‑1 (MQ=60)

                                            GCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGA                                                  >  SRR4302541.5066674/1‑94 (MQ=60)

                                             CCACCAGAAACGGTTTCCTCCTGCTGGAACTGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGAC                                                 <  SRR4302541.2202869/94‑1 (MQ=60)

                                              CACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACTCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACA                                                <  SRR4302541.6830887/94‑1 (MQ=60)

                                              CACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACA                                                <  SRR4302541.2773682/94‑1 (MQ=60)

                                              CACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACA                                                >  SRR4302541.5013112/1‑94 (MQ=60)

                                               ACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAG                                               >  SRR4302541.6065468/1‑94 (MQ=60)

                                               ACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAG                                               >  SRR4302541.3968601/1‑94 (MQ=60)

                                                CCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGT                                              >  SRR4302541.2455949/1‑94 (MQ=60)

                                                CCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGA                                              >  SRR4302541.5884337/1‑94 (MQ=60)

                                                CCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGA                                              >  SRR4302541.1896325/1‑94 (MQ=60)

                                                 CAGCAACGGTTTCCTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAT                                             <  SRR4302541.5466179/94‑1 (MQ=60)

                                                 CAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACTCCACGGTTTACTTTGTGCTGACAGAC                                             >  SRR4302541.5762889/1‑94 (MQ=60)

                                                 CAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAT                                             >  SRR4302541.3173935/1‑94 (MQ=60)

                                                 CAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAT                                             <  SRR4302541.3297504/94‑1 (MQ=60)

                                                 CAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAT                                             <  SRR4302541.1408398/94‑1 (MQ=60)

                                                 CAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAT                                             <  SRR4302541.346924/94‑1 (MQ=60)

                                                 CAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGAT                                             >  SRR4302541.2787788/1‑94 (MQ=60)

                                                  AGCAACGGTTTCCTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATC                                            <  SRR4302541.871607/94‑1 (MQ=60)

                                                  AGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATG                                            >  SRR4302541.1610429/1‑94 (MQ=60)

                                                  AGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATG                                            >  SRR4302541.2009971/1‑94 (MQ=60)

                                                  AGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATC                                            >  SRR4302541.4935466/1‑94 (MQ=60)

                                                   GCAACGGTTTACTCCTGCTGGAACGGCCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCG                                           <  SRR4302541.2863566/94‑1 (MQ=60)

                                                    CAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGT                                          >  SRR4302541.2478084/1‑94 (MQ=60)

                                                    CAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGT                                          <  SRR4302541.6225697/94‑1 (MQ=60)

                                                     AACGGTTTCCTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTT                                         <  SRR4302541.5053629/94‑1 (MQ=60)

                                                     AACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTT                                         <  SRR4302541.6452487/94‑1 (MQ=60)

                                                      ACGGTTTCCTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTT                                        <  SRR4302541.2657838/94‑1 (MQ=60)

                                                       CGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTC                                       <  SRR4302541.1959925/94‑1 (MQ=60)

                                                       CGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTC                                       <  SRR4302541.4797319/94‑1 (MQ=60)

                                                       CGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTC                                       <  SRR4302541.6154778/94‑1 (MQ=60)

                                                       CGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTC                                       >  SRR4302541.136219/1‑94 (MQ=60)

                                                       CGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTC                                       >  SRR4302541.4009051/1‑94 (MQ=60)

                                                        GGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCG                                      <  SRR4302541.1803632/94‑1 (MQ=60)

                                                        GGTTTACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCG                                      <  SRR4302541.2890584/94‑1 (MQ=60)

                                                        GGTTTACTCCTGCTGGAACGCGCAGAAACTAACGCACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCG                                      <  SRR4302541.2488126/94‑1 (MQ=60)

                                                         gttgcctctggtgggagCGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGA                                     <  SRR4302541.6489860/77‑1 (MQ=60)

                                                            TACTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAA                                  >  SRR4302541.1096740/1‑94 (MQ=60)

                                                              CTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACG                                >  SRR4302541.351252/1‑94 (MQ=60)

                                                              CTCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACG                                >  SRR4302541.6444038/1‑94 (MQ=60)

                                                               TCCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCCTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAACACGG                               >  SRR4302541.6740366/1‑94 (MQ=60)

                                                                CCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGC                              >  SRR4302541.1192549/1‑94 (MQ=60)

                                                                CCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGC                              <  SRR4302541.7355439/94‑1 (MQ=60)

                                                                CCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGC                              >  SRR4302541.4792535/1‑94 (MQ=60)

                                                                CCTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGC                              >  SRR4302541.3853149/1‑94 (MQ=60)

                                                                 CTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCG                             <  SRR4302541.7362730/94‑1 (MQ=60)

                                                                 CTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCG                             <  SRR4302541.8306707/94‑1 (MQ=60)

                                                                 CTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCG                             <  SRR4302541.2610951/94‑1 (MQ=60)

                                                                 CTGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCG                             <  SRR4302541.5451691/94‑1 (MQ=60)

                                                                  TGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGA                            >  SRR4302541.120302/1‑94 (MQ=60)

                                                                  TGCTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGA                            >  SRR4302541.1377723/1‑94 (MQ=60)

                                                                   TCTGGAGCGGGCAGAACCTGCCACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGAT                           <  SRR4302541.3299928/94‑1 (MQ=60)

                                                                    CTGGGACGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATC                          <  SRR4302541.6785100/94‑1 (MQ=60)

                                                                    CTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATC                          >  SRR4302541.648685/1‑94 (MQ=60)

                                                                    CTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATC                          <  SRR4302541.4360521/94‑1 (MQ=60)

                                                                    CTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATC                          <  SRR4302541.2591660/94‑1 (MQ=60)

                                                                    CTGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATC                          >  SRR4302541.2818435/1‑94 (MQ=60)

                                                                     TGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCC                         >  SRR4302541.5919580/1‑94 (MQ=60)

                                                                     TGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCC                         >  SRR4302541.6924040/1‑94 (MQ=60)

                                                                     TGGAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCC                         >  SRR4302541.5801625/1‑94 (MQ=60)

                                                                       GAGCGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCA                       <  SRR4302541.842974/94‑1 (MQ=60)

                                                                       GAACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCA                       >  SRR4302541.5591567/1‑94 (MQ=60)

                                                                        AACGGGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAG                      <  SRR4302541.7663491/94‑1 (MQ=60)

                                                                        AACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAG                      <  SRR4302541.3447147/94‑1 (MQ=60)

                                                                        AACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAG                      >  SRR4302541.8289984/1‑94 (MQ=60)

                                                                        AACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAG                      <  SRR4302541.4949949/94‑1 (MQ=60)

                                                                         ACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGT                     <  SRR4302541.759367/94‑1 (MQ=60)

                                                                         ACGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGT                     >  SRR4302541.5157043/1‑94 (MQ=60)

                                                                          CGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTA                    <  SRR4302541.5882797/94‑1 (MQ=60)

                                                                          CGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTA                    >  SRR4302541.2587292/1‑94 (MQ=60)

                                                                          CGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTA                    <  SRR4302541.4346084/94‑1 (MQ=60)

                                                                          CGGGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTCTACTTTGTGCTGACAGATCGTTTTGAAAACGGCGATTCCAGTA                    >  SRR4302541.4737432/1‑94 (MQ=60)

                                                                            GGCAGAAACTGACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAAT                  <  SRR4302541.2638814/94‑1 (MQ=60)

                                                                            GGCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAAT                  <  SRR4302541.7697401/94‑1 (MQ=60)

                                                                             GCAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATG                 >  SRR4302541.6425230/1‑94 (MQ=60)

                                                                              CAGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGA                >  SRR4302541.5666180/1‑94 (MQ=60)

                                                                               AGAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGAC               >  SRR4302541.4993876/1‑94 (MQ=60)

                                                                                GAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACC              <  SRR4302541.7171175/94‑1 (MQ=60)

                                                                                AAAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACC              <  SRR4302541.7305383/94‑1 (MQ=60)

                                                                                 AAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCA             <  SRR4302541.8617474/94‑1 (MQ=60)

                                                                                 AAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCA             <  SRR4302541.887995/94‑1 (MQ=60)

                                                                                 AAACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCA             >  SRR4302541.2917716/1‑94 (MQ=60)

                                                                                  AACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAG            <  SRR4302541.6791904/94‑1 (MQ=60)

                                                                                   ACTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGA           >  SRR4302541.4350393/1‑94 (MQ=60)

                                                                                    CTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAG          >  SRR4302541.5423586/1‑94 (MQ=60)

                                                                                    CTGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAG          >  SRR4302541.3227251/1‑94 (MQ=60)

                                                                                     TGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGT         >  SRR4302541.5189651/1‑94 (MQ=60)

                                                                                     TGACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGT         >  SRR4302541.3512431/1‑94 (MQ=60)

                                                                                      GACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTT        >  SRR4302541.3144820/1‑94 (MQ=60)

                                                                                       ACTCACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTA       <  SRR4302541.1341897/94‑1 (MQ=60)

                                                                                       ACACCCCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTA       <  SRR4302541.7095353/94‑1 (MQ=60)

                                                                                       ACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTA       <  SRR4302541.6986543/94‑1 (MQ=60)

                                                                                       ACACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTA       <  SRR4302541.577892/94‑1 (MQ=60)

                                                                                         ACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACG     >  SRR4302541.683369/1‑94 (MQ=60)

                                                                                         ACACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACG     <  SRR4302541.5332476/94‑1 (MQ=60)

                                                                                          CACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGG    <  SRR4302541.3644232/94‑1 (MQ=60)

                                                                                          CACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGG    >  SRR4302541.1097589/1‑94 (MQ=60)

                                                                                          CACCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGG    >  SRR4302541.4111828/1‑94 (MQ=60)

                                                                                            CCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGGAC  >  SRR4302541.1855122/1‑94 (MQ=60)

                                                                                            CCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGGAC  <  SRR4302541.2501042/94‑1 (MQ=60)

                                                                                            CCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGGAC  >  SRR4302541.8756906/1‑94 (MQ=60)

                                                                                            CCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGGAATGACCAGAGTTACGGAC  >  SRR4302541.7916084/1‑94 (MQ=60)

AAATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACATCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGGAC  >  NC_000913/3735574‑3735759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`