Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,743,603 Δ1 bp coding (1171/1275 nt) yiaN → putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,743,6030C.100.0% 1710.8 / NA 365coding (1171/1275 nt)yiaNputative membrane protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (177/188);  total (177/188)

Only 100 of 368 total aligned reads displayed.

TATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTC  >  NC_000913/3743515‑3743690
                                                                                        |                                                                                       
tATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGc                                                                                    <  2:4836095/93‑1 (MQ=255)
tATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGc                                                                                    <  2:1311456/93‑1 (MQ=255)
  tCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAg                                                                                  <  2:5824763/93‑1 (MQ=255)
   taTTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGt                                                                                 <  1:2937233/92‑1 (MQ=255)
   cATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGt                                                                                 >  2:3154429/1‑93 (MQ=255)
    aTTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTc                                                                                >  1:7998894/1‑93 (MQ=255)
      tAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCag                                                                              <  1:702652/93‑1 (MQ=255)
      tAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCag                                                                              <  2:2207970/93‑1 (MQ=255)
      tAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCag                                                                              >  1:7504492/1‑93 (MQ=255)
       aaCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCaga                                                                             <  1:7275621/93‑1 (MQ=255)
       aaCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCaga                                                                             >  2:8212362/1‑93 (MQ=255)
        aCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCagag                                                                            <  2:1136287/93‑1 (MQ=255)
        aCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCagag                                                                            >  2:7675050/1‑93 (MQ=255)
        aCTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCagag                                                                            >  2:3525146/1‑93 (MQ=255)
         cTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAgg                                                                           >  1:3107999/1‑93 (MQ=255)
          tGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGc                                                                          <  1:82970/93‑1 (MQ=255)
          tGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGc                                                                          <  2:899594/93‑1 (MQ=255)
          tGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGc                                                                          >  1:2480672/1‑93 (MQ=255)
            cTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGt                                                                        <  1:5928287/93‑1 (MQ=255)
             tCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGtt                                                                       <  2:5880804/93‑1 (MQ=255)
                aTCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTc                                                                    >  2:2633409/1‑93 (MQ=255)
                 tCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTcc                                                                   >  1:6041287/1‑93 (MQ=255)
                   ggCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCt                                                                 >  2:5073287/1‑93 (MQ=255)
                    gCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCtt                                                                >  2:4232086/1‑93 (MQ=255)
                     cTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTa                                                               <  1:1867914/93‑1 (MQ=255)
                      ttAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAc                                                              >  1:3962951/1‑93 (MQ=255)
                       tAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACg                                                             <  2:4676964/93‑1 (MQ=255)
                       tAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACg                                                             >  2:7849137/1‑93 (MQ=255)
                       tAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACg                                                             >  1:7165654/1‑93 (MQ=255)
                        aaTTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGt                                                            <  2:2465861/93‑1 (MQ=255)
                        aaTTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGt                                                            >  1:1946619/1‑93 (MQ=255)
                         aTTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTc                                                           <  1:6755816/93‑1 (MQ=255)
                         aTTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTc                                                           >  1:6591130/1‑93 (MQ=255)
                          ttACCCCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTcc                                                          <  1:6530347/93‑1 (MQ=255)
                          ttACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTcc                                                          <  1:8623666/93‑1 (MQ=255)
                           tACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCt                                                         >  2:7331010/1‑93 (MQ=255)
                           tACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCt                                                         <  2:7602571/93‑1 (MQ=255)
                           tACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCt                                                         >  2:795465/1‑93 (MQ=255)
                            acacCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTg                                                        <  2:305367/93‑1 (MQ=255)
                            acacCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTg                                                        <  1:3637882/93‑1 (MQ=255)
                            acacCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTg                                                        >  1:8577160/1‑93 (MQ=255)
                            acacCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTg                                                        <  2:8398505/93‑1 (MQ=255)
                              acCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGt                                                      <  1:5275294/93‑1 (MQ=255)
                               ccGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGtt                                                     >  1:5499052/1‑93 (MQ=255)
                               ccGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGtt                                                     >  1:5068719/1‑93 (MQ=255)
                                  ccTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTta                                                  <  1:5672090/93‑1 (MQ=255)
                                   cTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtat                                                 <  2:8472028/93‑1 (MQ=255)
                                    tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtatt                                                >  2:7078969/1‑92 (MQ=255)
                                    tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtatt                                                >  2:5522086/1‑92 (MQ=255)
                                    tATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTtata                                                <  2:2092633/93‑1 (MQ=255)
                                     aTCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTatat                                               <  2:6104127/93‑1 (MQ=255)
                                      tCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATAtt                                              <  1:771752/93‑1 (MQ=255)
                                        tgTAATGTACTTAACGGTATTTCAGGGGTGGCCAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCa                                            <  1:2757918/92‑1 (MQ=255)
                                        ggTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCa                                            <  1:343811/93‑1 (MQ=255)
                                        ggTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCa                                            <  1:6374313/93‑1 (MQ=255)
                                        ggTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCa                                            >  1:3736434/1‑93 (MQ=255)
                                         gTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCat                                           >  1:122844/1‑93 (MQ=255)
                                         gTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCat                                           <  2:5292886/93‑1 (MQ=255)
                                         gTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCat                                           <  2:654530/93‑1 (MQ=255)
                                          tAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCatt                                          <  2:3944165/93‑1 (MQ=255)
                                           aaTGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCatta                                         <  2:442253/93‑1 (MQ=255)
                                             tGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCattatt                                       >  1:1072658/1‑93 (MQ=255)
                                              gTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAttatta                                      <  1:8701103/93‑1 (MQ=255)
                                              gTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAttatta                                      >  1:4403663/1‑93 (MQ=255)
                                               tACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAg                                     <  1:4986807/93‑1 (MQ=255)
                                                 cTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTc                                   >  2:6323550/1‑93 (MQ=255)
                                                  ttAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCg                                  >  2:2978613/1‑93 (MQ=255)
                                                  ttAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCg                                  <  1:6967006/93‑1 (MQ=255)
                                                     aCGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGCTTTATATTCATTATTAGTCGTAt                               >  2:6299699/1‑93 (MQ=255)
                                                      cGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATCTTCATTATTAGTCGTAtt                              >  2:4020504/1‑93 (MQ=255)
                                                      cGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAtt                              <  2:3857094/93‑1 (MQ=255)
                                                       gTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAttt                             >  2:8597716/1‑93 (MQ=255)
                                                        ttATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTg                            >  1:3150962/1‑93 (MQ=255)
                                                        ttATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTg                            >  1:8050214/1‑93 (MQ=255)
                                                        ttATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTg                            >  2:1993178/1‑93 (MQ=255)
                                                         tATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGt                           <  2:7413656/93‑1 (MQ=255)
                                                         tATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTCTTATATTCATTATTAGTCGTATTTGt                           >  1:4672964/1‑93 (MQ=255)
                                                              cAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTa                      >  2:1713621/1‑93 (MQ=255)
                                                               aGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAt                     >  2:7249911/1‑93 (MQ=255)
                                                                ggggTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAtt                    >  2:6824831/1‑93 (MQ=255)
                                                                  ggTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTcc                  <  2:6955056/93‑1 (MQ=255)
                                                                   gTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTccc                 <  2:3699847/93‑1 (MQ=255)
                                                                   gTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTccc                 <  1:4252803/93‑1 (MQ=255)
                                                                   gTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTccc                 >  1:8162458/1‑93 (MQ=255)
                                                                    tGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTGATTATTAGTCGTATTTGTTTTTATTccct                >  1:2367875/1‑92 (MQ=255)
                                                                    tGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCg                <  2:1037319/93‑1 (MQ=255)
                                                                      gCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAt              <  1:1825314/93‑1 (MQ=255)
                                                                      gCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAt              <  1:449034/93‑1 (MQ=255)
                                                                       cAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAtc             <  2:2267978/93‑1 (MQ=255)
                                                                       cAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAtc             <  1:1011804/93‑1 (MQ=255)
                                                                         aaaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAtctc           >  1:2539436/1‑93 (MQ=255)
                                                                          aaCTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtca          <  1:8343628/93‑1 (MQ=255)
                                                                            cTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatc        <  1:3835089/93‑1 (MQ=255)
                                                                            cTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatc        <  1:4160678/93‑1 (MQ=255)
                                                                            cTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCtcatc        <  1:1425068/93‑1 (MQ=255)
                                                                              cAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTcatcat      >  1:678052/1‑93 (MQ=255)
                                                                               aaaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCatcatc     <  1:8531940/93‑1 (MQ=255)
                                                                                aaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcc    <  1:1614311/93‑1 (MQ=255)
                                                                                aaTTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcc    >  2:1502108/1‑93 (MQ=255)
                                                                                  ttCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAtcctc  >  2:8013431/1‑93 (MQ=255)
                                                                                        |                                                                                       
TATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTC  >  NC_000913/3743515‑3743690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 217 total aligned reads displayed.
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  >  NC_000913/3743510‑3743696
                                                                                             |                                                                                             
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               >  SRR4302541.7545414/1‑94 (MQ=60)
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               <  SRR4302541.3189528/94‑1 (MQ=60)
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               >  SRR4302541.1930621/1‑94 (MQ=60)
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               >  SRR4302541.6485762/1‑94 (MQ=60)
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATG                                                                                               <  SRR4302541.8064367/94‑1 (MQ=60)
  GTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GAT                                                                                            <  SRR4302541.8404176/94‑1 (MQ=60)
   TTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATG                                                                                           <  SRR4302541.7013284/94‑1 (MQ=60)
   TTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATG                                                                                           <  SRR4302541.2526459/94‑1 (MQ=60)
      ATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAG                                                                                        <  SRR4302541.8401190/94‑1 (MQ=60)
       TCATTAACTGCTCAATCGGCTTAATTACCCCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       <  SRR4302541.4999657/94‑1 (MQ=60)
       TCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGTGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       <  SRR4302541.694965/94‑1 (MQ=60)
       TCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       <  SRR4302541.4527952/94‑1 (MQ=60)
       TCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       <  SRR4302541.6555437/94‑1 (MQ=60)
       TCATTAACTGCTCAATCGCCGTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGT                                                                                       >  SRR4302541.8626210/1‑94 (MQ=60)
        TATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTC                                                                                      <  SRR4302541.2966771/94‑1 (MQ=60)
        CATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTC                                                                                      >  SRR4302541.8210733/1‑94 (MQ=60)
        CATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTC                                                                                      >  SRR4302541.8086918/1‑94 (MQ=60)
        CATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTC                                                                                      <  SRR4302541.3612726/94‑1 (MQ=60)
         ATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCA                                                                                     <  SRR4302541.7061247/94‑1 (MQ=60)
          TTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAG                                                                                    >  SRR4302541.7584705/1‑94 (MQ=60)
          TTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAG                                                                                    >  SRR4302541.7584706/1‑94 (MQ=60)
           TAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGA                                                                                   <  SRR4302541.709261/94‑1 (MQ=60)
           TAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGA                                                                                   <  SRR4302541.5167854/94‑1 (MQ=60)
            TACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGTGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAG                                                                                  <  SRR4302541.6846536/94‑1 (MQ=60)
            AACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAG                                                                                  <  SRR4302541.7353245/94‑1 (MQ=60)
            AACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAG                                                                                  <  SRR4302541.3910344/94‑1 (MQ=60)
             ACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGG                                                                                 <  SRR4302541.1376666/94‑1 (MQ=60)
             ACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGG                                                                                 >  SRR4302541.4569182/1‑94 (MQ=60)
             ACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGG                                                                                 <  SRR4302541.5656235/94‑1 (MQ=60)
             ACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGG                                                                                 >  SRR4302541.3139467/1‑94 (MQ=60)
              CTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGC                                                                                >  SRR4302541.2505564/1‑94 (MQ=60)
               TGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCG                                                                               <  SRR4302541.83686/94‑1 (MQ=60)
               TGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCG                                                                               >  SRR4302541.1852387/1‑94 (MQ=60)
               TGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCG                                                                               <  SRR4302541.5279273/94‑1 (MQ=60)
                GCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGT                                                                              <  SRR4302541.5031923/94‑1 (MQ=60)
                 CTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGGGGCGTT                                                                             >  SRR4302541.1855722/1‑94 (MQ=60)
                 CTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTT                                                                             <  SRR4302541.212915/94‑1 (MQ=60)
                 CTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTT                                                                             <  SRR4302541.5988662/94‑1 (MQ=60)
                 CTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTT                                                                             >  SRR4302541.3615370/1‑94 (MQ=60)
                 CTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTT                                                                             <  SRR4302541.8569569/94‑1 (MQ=60)
                   CAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTT                                                                           <  SRR4302541.3140134/94‑1 (MQ=60)
                    AATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTC                                                                          >  SRR4302541.660884/1‑94 (MQ=60)
                     ATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCC                                                                         >  SRR4302541.6103110/1‑94 (MQ=60)
                     ATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCC                                                                         >  SRR4302541.1026276/1‑94 (MQ=60)
                     ATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCC                                                                         >  SRR4302541.2407343/1‑94 (MQ=60)
                     ATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGACGTTTTCC                                                                         >  SRR4302541.253500/1‑94 (MQ=60)
                      TCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCC                                                                        >  SRR4302541.191616/1‑94 (MQ=60)
                        GGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTT                                                                      <  SRR4302541.5079430/94‑1 (MQ=60)
                          GTTAATTCCACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    <  SRR4302541.7729334/94‑1 (MQ=60)
                          CTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    >  SRR4302541.4002308/1‑94 (MQ=60)
                          CTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    >  SRR4302541.8259428/1‑94 (MQ=60)
                          CTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    >  SRR4302541.3754748/1‑94 (MQ=60)
                          CTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    >  SRR4302541.5897472/1‑94 (MQ=60)
                          CTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTAC                                                                    <  SRR4302541.1885908/94‑1 (MQ=60)
                           TTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACG                                                                   >  SRR4302541.7242034/1‑94 (MQ=60)
                           TTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGAGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACG                                                                   >  SRR4302541.7387222/1‑94 (MQ=60)
                            TAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGT                                                                  >  SRR4302541.1965378/1‑94 (MQ=60)
                            TAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGT                                                                  >  SRR4302541.8534409/1‑94 (MQ=60)
                            TAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGT                                                                  >  SRR4302541.3821100/1‑94 (MQ=60)
                            TAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGT                                                                  >  SRR4302541.5683414/1‑94 (MQ=60)
                             TATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTC                                                                 <  SRR4302541.4500479/94‑1 (MQ=60)
                             AATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTC                                                                 >  SRR4302541.3258227/1‑94 (MQ=60)
                             AATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTC                                                                 <  SRR4302541.1199425/94‑1 (MQ=60)
                             AATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTC                                                                 >  SRR4302541.6658616/1‑94 (MQ=60)
                             AATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTC                                                                 >  SRR4302541.3676326/1‑94 (MQ=60)
                             AATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTC                                                                 >  SRR4302541.3764478/1‑94 (MQ=60)
                              ATTACACCTCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCC                                                                <  SRR4302541.6828069/94‑1 (MQ=60)
                              ATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCC                                                                >  SRR4302541.7681480/1‑94 (MQ=60)
                              ATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCC                                                                <  SRR4302541.6828067/94‑1 (MQ=60)
                               TTACCCCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCT                                                               <  SRR4302541.6597008/94‑1 (MQ=60)
                               TTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCT                                                               <  SRR4302541.1783187/94‑1 (MQ=60)
                               TTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCT                                                               <  SRR4302541.2741335/94‑1 (MQ=60)
                               TTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCT                                                               <  SRR4302541.8716107/94‑1 (MQ=60)
                               TTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCT                                                               <  SRR4302541.8716108/94‑1 (MQ=60)
                                TACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTG                                                              >  SRR4302541.3973693/1‑94 (MQ=60)
                                TACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTG                                                              >  SRR4302541.8669255/1‑94 (MQ=60)
                                TACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTG                                                              <  SRR4302541.4253750/94‑1 (MQ=60)
                                 TCACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGG                                                             <  SRR4302541.2540451/94‑1 (MQ=60)
                                 ACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGG                                                             <  SRR4302541.3674764/94‑1 (MQ=60)
                                 ACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGG                                                             <  SRR4302541.8179936/94‑1 (MQ=60)
                                 ACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGG                                                             <  SRR4302541.802296/94‑1 (MQ=60)
                                  CACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GTTGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGT                                                            >  SRR4302541.8573244/1‑94 (MQ=60)
                                  CACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGT                                                            <  SRR4302541.8811404/94‑1 (MQ=60)
                                   ACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTT                                                           >  SRR4302541.2410535/1‑94 (MQ=60)
                                   ACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTT                                                           >  SRR4302541.5120818/1‑94 (MQ=60)
                                   ACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTT                                                           >  SRR4302541.5555394/1‑94 (MQ=60)
                                   ACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTT                                                           >  SRR4302541.5555395/1‑94 (MQ=60)
                                    CCGCCTATCGGTAATGTACTTAACGTTATGTCAGGGGTGGCAAAACTCAAATTCGCT‑GATGCAGTCAGAGGCGTTTTCCattagctcctgggtt                                                          >  SRR4302541.3372160/1‑79 (MQ=60)
                                     CGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCGCTTACGTCCTGGTTTT                                                         <  SRR4302541.703176/94‑1 (MQ=60)
                                     CGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTT                                                         <  SRR4302541.7276229/94‑1 (MQ=60)
                                      GCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTA                                                        >  SRR4302541.4770746/1‑94 (MQ=60)
                                      GCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTA                                                        >  SRR4302541.443257/1‑94 (MQ=60)
                                       CCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTAT                                                       <  SRR4302541.5729980/94‑1 (MQ=60)
                                        CTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATT                                                      >  SRR4302541.1069302/1‑94 (MQ=60)
                                         TATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATAT                                                     >  SRR4302541.2968961/1‑94 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    >  SRR4302541.3868201/1‑94 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    <  SRR4302541.2592463/94‑1 (MQ=60)
                                          ATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    >  SRR4302541.8159348/1‑94 (MQ=60)
                                          ATCGGTAATGTACTTAACGCTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATT                                                    >  SRR4302541.7842649/1‑94 (MQ=60)
                                           TCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTC                                                   <  SRR4302541.778968/94‑1 (MQ=60)
                                            CGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCA                                                  >  SRR4302541.3774045/1‑94 (MQ=60)
                                            CGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCA                                                  <  SRR4302541.5058618/94‑1 (MQ=60)
                                             TGTAATGTACTTAACGGTATTTCAGGGGTGGCCAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 <  SRR4302541.2785632/94‑1 (MQ=60)
                                             GGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 >  SRR4302541.123820/1‑94 (MQ=60)
                                             GGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 <  SRR4302541.6439447/94‑1 (MQ=60)
                                             GGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 <  SRR4302541.346901/94‑1 (MQ=60)
                                             GGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 >  SRR4302541.605554/1‑94 (MQ=60)
                                             GGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCAT                                                 <  SRR4302541.2785633/94‑1 (MQ=60)
                                               TAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTT                                               >  SRR4302541.8126239/1‑94 (MQ=60)
                                               TAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTA                                               >  SRR4302541.4046514/1‑94 (MQ=60)
                                                AATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTAT                                              >  SRR4302541.1150829/1‑94 (MQ=60)
                                                 ATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATT                                             >  SRR4302541.86526/1‑94 (MQ=60)
                                                 ATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATT                                             <  SRR4302541.8666241/94‑1 (MQ=60)
                                                 ATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATT                                             >  SRR4302541.1082645/1‑94 (MQ=60)
                                                  TGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTA                                            <  SRR4302541.4051675/94‑1 (MQ=60)
                                                  TGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTA                                            >  SRR4302541.1978537/1‑94 (MQ=60)
                                                  TGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTA                                            >  SRR4302541.4447718/1‑94 (MQ=60)
                                                  TGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTA                                            <  SRR4302541.6834356/94‑1 (MQ=60)
                                                   GTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAG                                           <  SRR4302541.8794217/94‑1 (MQ=60)
                                                   GTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAG                                           <  SRR4302541.2571443/94‑1 (MQ=60)
                                                    TACTTAACGTTATTTCAGGGGTGGCAAAACTCTAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGT                                          <  SRR4302541.3027201/94‑1 (MQ=60)
                                                    TACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGT                                          >  SRR4302541.8753077/1‑94 (MQ=60)
                                                    TACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGT                                          >  SRR4302541.6715936/1‑94 (MQ=60)
                                                    TACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGT                                          <  SRR4302541.5037980/94‑1 (MQ=60)
                                                    TACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGA‑CGATGCAGGCAGAGGCGTTTTCCCTTACGTCCTGTTTTTATATTCATTAccagc                                          >  SRR4302541.6715935/1‑89 (MQ=60)
                                                      CTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCG                                        >  SRR4302541.7256623/1‑94 (MQ=60)
                                                       TTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGT                                       <  SRR4302541.7041267/94‑1 (MQ=60)
                                                       TTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCATGGTTTTATATTCATTATTAGTCGT                                       >  SRR4302541.455592/1‑94 (MQ=60)
                                                        TAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTA                                      >  SRR4302541.5343827/1‑94 (MQ=60)
                                                        TAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTAAATTCATTATTAGTCGTA                                      >  SRR4302541.5229254/1‑94 (MQ=60)
                                                         CACGTTACTTCAGGGGTGGCAAAACTCAAAGTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAT                                     <  SRR4302541.1377039/94‑1 (MQ=60)
                                                         AACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAT                                     >  SRR4302541.577880/1‑94 (MQ=60)
                                                         AACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTAT                                     >  SRR4302541.1215065/1‑94 (MQ=60)
                                                          ACGTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATCTTCATTATTAGTCGTATT                                    >  SRR4302541.6559325/1‑94 (MQ=60)
                                                            GTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTG                                  <  SRR4302541.6691074/94‑1 (MQ=60)
                                                            GTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTG                                  >  SRR4302541.7084480/1‑94 (MQ=60)
                                                            GTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTG                                  >  SRR4302541.3182765/1‑94 (MQ=60)
                                                            GTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTG                                  >  SRR4302541.5450076/1‑94 (MQ=60)
                                                            GTTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTG                                  >  SRR4302541.8138720/1‑94 (MQ=60)
                                                             TTATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTCTTATATTCATTATTAGTCGTATTTGT                                 >  SRR4302541.4720552/1‑94 (MQ=60)
                                                              TATTTCATGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTT                                >  SRR4302541.7213541/1‑94 (MQ=60)
                                                              TATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTT                                >  SRR4302541.5762533/1‑94 (MQ=60)
                                                              TATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTT                                <  SRR4302541.8674849/94‑1 (MQ=60)
                                                               ATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTT                               <  SRR4302541.6189942/94‑1 (MQ=60)
                                                               ATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTT                               >  SRR4302541.7159072/1‑94 (MQ=60)
                                                               ATTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGGTTTATATTCATTATTAGTCGCTTTTGTTT                               >  SRR4302541.7159071/1‑94 (MQ=60)
                                                                TTTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTT                              <  SRR4302541.1960824/94‑1 (MQ=60)
                                                                 TTCAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTT                             <  SRR4302541.4424122/94‑1 (MQ=60)
                                                                   CAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAT                           <  SRR4302541.8380424/94‑1 (MQ=60)
                                                                   CAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAT                           <  SRR4302541.1314392/94‑1 (MQ=60)
                                                                   CAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAT                           <  SRR4302541.4293550/94‑1 (MQ=60)
                                                                   CAGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTAT                           <  SRR4302541.2842997/94‑1 (MQ=60)
                                                                    AGGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATT                          <  SRR4302541.2005888/94‑1 (MQ=60)
                                                                     AGGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTC                         <  SRR4302541.1466215/94‑1 (MQ=60)
                                                                      GGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCC                        >  SRR4302541.6508240/1‑94 (MQ=60)
                                                                      GGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCC                        <  SRR4302541.1857692/94‑1 (MQ=60)
                                                                      GGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCC                        <  SRR4302541.4465789/94‑1 (MQ=60)
                                                                      GGGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCC                        >  SRR4302541.6088816/1‑94 (MQ=60)
                                                                       GGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCC                       >  SRR4302541.8251628/1‑94 (MQ=60)
                                                                       GGTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCC                       <  SRR4302541.6630632/94‑1 (MQ=60)
                                                                        GTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTGATTATTAGTCGTATTTGTTTTTATTCCCT                      >  SRR4302541.2390984/1‑94 (MQ=60)
                                                                        GTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCG                      <  SRR4302541.8130495/94‑1 (MQ=60)
                                                                        GTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCG                      <  SRR4302541.6369886/94‑1 (MQ=60)
                                                                        GTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCG                      <  SRR4302541.4014171/94‑1 (MQ=60)
                                                                        GTGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCG                      <  SRR4302541.4295300/94‑1 (MQ=60)
                                                                         TGGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGA                     <  SRR4302541.7269408/94‑1 (MQ=60)
                                                                          GGCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAT                    >  SRR4302541.31500/1‑94 (MQ=60)
                                                                           GCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATC                   <  SRR4302541.453310/94‑1 (MQ=60)
                                                                           GCAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATC                   <  SRR4302541.1843025/94‑1 (MQ=60)
                                                                            CAAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCT                  <  SRR4302541.1021167/94‑1 (MQ=60)
                                                                             AAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTC                 >  SRR4302541.2564926/1‑94 (MQ=60)
                                                                             AAAACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTC                 <  SRR4302541.8375311/94‑1 (MQ=60)
                                                                               AACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCAT               <  SRR4302541.8708483/94‑1 (MQ=60)
                                                                               AACTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCAT               <  SRR4302541.8434205/94‑1 (MQ=60)
                                                                                 CTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCA             <  SRR4302541.4201852/94‑1 (MQ=60)
                                                                                 CTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCA             <  SRR4302541.3873723/94‑1 (MQ=60)
                                                                                 CTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCA             <  SRR4302541.1438937/94‑1 (MQ=60)
                                                                                 CTCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCA             <  SRR4302541.8413151/94‑1 (MQ=60)
                                                                                  TCAAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCAT            >  SRR4302541.684451/1‑94 (MQ=60)
                                                                                    AAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCC          <  SRR4302541.1662085/94‑1 (MQ=60)
                                                                                    AAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCC          >  SRR4302541.7707163/1‑94 (MQ=60)
                                                                                    AAATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCC          <  SRR4302541.8623708/94‑1 (MQ=60)
                                                                                     AATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCT         <  SRR4302541.3161763/94‑1 (MQ=60)
                                                                                     AATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCT         <  SRR4302541.8810518/94‑1 (MQ=60)
                                                                                     AATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCT         <  SRR4302541.1630346/94‑1 (MQ=60)
                                                                                     AATTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCT         <  SRR4302541.1745489/94‑1 (MQ=60)
                                                                                       TTCGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCC       >  SRR4302541.8211253/1‑94 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTTATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCT     >  SRR4302541.5466140/1‑94 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCT     >  SRR4302541.2306423/1‑94 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCT     <  SRR4302541.4092802/94‑1 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCT     >  SRR4302541.2802483/1‑94 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGAACTCATCATCCTCCCT     <  SRR4302541.2449446/94‑1 (MQ=60)
                                                                                         CGAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTGTGATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCT     <  SRR4302541.4092801/94‑1 (MQ=60)
                                                                                          GAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTT    <  SRR4302541.6841275/94‑1 (MQ=60)
                                                                                          GAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTT    <  SRR4302541.405596/94‑1 (MQ=60)
                                                                                          GAT‑GATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTT    >  SRR4302541.1537419/1‑94 (MQ=60)
                                                                                             TGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  <  SRR4302541.3783736/94‑1 (MQ=60)
                                                                                             TGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  <  SRR4302541.3670736/94‑1 (MQ=60)
                                                                                             TGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  >  SRR4302541.1907133/1‑94 (MQ=60)
                                                                                             AGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  <  SRR4302541.3670739/94‑1 (MQ=60)
                                                                                             |                                                                                             
ATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATCGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTG  >  NC_000913/3743510‑3743696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑