Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,816,074 A→G T234A (ACC→GCC)  dinD → DNA‑damage‑inducible protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,816,0740AG98.9% 1200.9 / ‑0.9 357T234A (ACC→GCC) dinDDNA‑damage‑inducible protein
Reads supporting (aligned to +/- strand):  ref base A (4/0);  new base G (199/154);  total (203/154)
Fisher's exact test for biased strand distribution p-value = 1.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.57e-01

Only 100 of 376 total aligned reads displayed.

TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC  >  NC_000913/3815984‑3816163
                                                                                          |                                                                                         
tCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAAcgcc                                                                                         <  2:8299501/93‑1 (MQ=255)
 cAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAATAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAAcgcca                                                                                        <  2:8426802/93‑1 (MQ=255)
  aaCAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAAcgccac                                                                                       >  2:1081286/1‑93 (MQ=255)
   aCAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcaca                                                                                      >  1:3439841/1‑93 (MQ=255)
    cAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacac                                                                                     >  2:4591202/1‑93 (MQ=255)
     aGAACTGGCGGCTAATCTCTTTCGAGCTACTCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacaca                                                                                    >  1:6681470/1‑93 (MQ=255)
     aGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacaca                                                                                    >  1:8557680/1‑93 (MQ=255)
     aGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacaca                                                                                    <  1:6270959/93‑1 (MQ=255)
      gAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCacacac                                                                                   >  1:7052299/1‑93 (MQ=255)
      gAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCacacac                                                                                   >  1:2641448/1‑93 (MQ=255)
         cTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACttt                                                                                <  1:4647923/93‑1 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               >  1:1357723/1‑93 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               <  2:7140403/93‑1 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               >  1:3749883/1‑93 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               >  1:3317920/1‑93 (MQ=255)
          tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg                                                                               >  2:4842018/1‑93 (MQ=255)
           ggcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGa                                                                              >  2:3989231/1‑93 (MQ=255)
           ggcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGa                                                                              <  2:2058687/93‑1 (MQ=255)
           ggcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGa                                                                              <  2:6360574/93‑1 (MQ=255)
            gcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGAc                                                                             <  2:8628693/93‑1 (MQ=255)
            gcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGAc                                                                             >  1:6937976/1‑93 (MQ=255)
             cggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACg                                                                            >  2:2020243/1‑93 (MQ=255)
              ggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGt                                                                           <  1:5232958/93‑1 (MQ=255)
              ggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGt                                                                           >  1:1605839/1‑93 (MQ=255)
              ggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGt                                                                           <  2:1776680/93‑1 (MQ=255)
              ggcTAATCTATTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGt                                                                           >  2:5423788/1‑93 (MQ=255)
               gcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTg                                                                          >  1:3977513/1‑93 (MQ=255)
               gcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTg                                                                          >  1:2859068/1‑93 (MQ=255)
                cTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTgg                                                                         >  2:2719135/1‑93 (MQ=255)
                 tAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTggg                                                                        >  1:4551638/1‑93 (MQ=255)
                  aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTgggc                                                                       >  2:5646709/1‑92 (MQ=255)
                  aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGt                                                                       >  2:7366504/1‑93 (MQ=255)
                  aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGt                                                                       >  1:2405973/1‑93 (MQ=255)
                      tctTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCa                                                                   >  2:1550384/1‑93 (MQ=255)
                        tttCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAg                                                                 >  2:6212619/1‑93 (MQ=255)
                        tttCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAg                                                                 >  1:7486954/1‑93 (MQ=255)
                            gAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGa                                                             >  1:4193504/1‑93 (MQ=255)
                            gAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGa                                                             <  1:810612/93‑1 (MQ=255)
                             aGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAg                                                            <  1:7210755/93‑1 (MQ=255)
                             aGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAg                                                            <  2:3640495/93‑1 (MQ=255)
                              gCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAgg                                                           >  1:5076113/1‑93 (MQ=255)
                              gCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAgg                                                           >  2:2214292/1‑93 (MQ=255)
                               cTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGc                                                          >  1:3112029/1‑93 (MQ=255)
                                  cccAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCaaa                                                       >  1:7292555/1‑93 (MQ=255)
                                   ccAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAAc                                                      >  1:6961768/1‑93 (MQ=255)
                                     aaaCAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCa                                                    >  2:6951170/1‑93 (MQ=255)
                                        cAGAAGAAAAACTCAAGCGGGATGGCGTGATTTCAAAACAGCAAGCAAACGCCACACACTTTGTCGTGGGATGCTTTGTGAGGCAAACCATTc                                                 >  2:8096311/1‑93 (MQ=255)
                                         agaagaAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCa                                                >  1:2323086/1‑93 (MQ=255)
                                         agaagaAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCa                                                >  1:2767606/1‑93 (MQ=255)
                                         agaagaAAAACTCAAGCGGGATGGCATGAATTCAAAACAGCAAGAAAACGCCACACACTTTGACGTGGGACGCAAGGTGAGGCAAACCATTCa                                                >  1:5823815/1‑93 (MQ=255)
                                             gaaAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGaa                                            >  2:437985/1‑93 (MQ=255)
                                              aaaaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGGGAGGCAAACCATTCAGGaat                                           >  1:7598870/1‑92 (MQ=255)
                                               aaaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACt                                          >  2:825601/1‑93 (MQ=255)
                                               aaaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACt                                          >  1:1945018/1‑93 (MQ=255)
                                                  aCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTgg                                       >  1:847129/1‑93 (MQ=255)
                                                  aCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTgg                                       >  1:1746800/1‑93 (MQ=255)
                                                    tCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCg                                     >  1:8356248/1‑93 (MQ=255)
                                                    tCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCg                                     <  2:2657416/93‑1 (MQ=255)
                                                     cAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGATGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCgg                                    <  1:6538563/93‑1 (MQ=255)
                                                     cAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCgg                                    <  1:1058065/93‑1 (MQ=255)
                                                      aaGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGa                                   >  2:7685690/1‑93 (MQ=255)
                                                       aGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGaa                                  >  2:4215634/1‑93 (MQ=255)
                                                        gCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAAc                                 <  2:5871875/93‑1 (MQ=255)
                                                          gggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCa                               <  1:7373639/93‑1 (MQ=255)
                                                          gggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCa                               >  2:1397158/1‑93 (MQ=255)
                                                           ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt                              <  1:1122425/93‑1 (MQ=255)
                                                           ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt                              <  2:506932/93‑1 (MQ=255)
                                                           ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt                              <  1:7778263/93‑1 (MQ=255)
                                                           ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt                              >  1:783441/1‑93 (MQ=255)
                                                            gATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATg                             <  2:3273321/93‑1 (MQ=255)
                                                             aTGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGc                            >  2:230457/1‑93 (MQ=255)
                                                                gCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGTCTg                         >  1:5402909/1‑93 (MQ=255)
                                                                gCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTg                         >  2:6597804/1‑93 (MQ=255)
                                                                 cGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTga                        <  1:4981996/93‑1 (MQ=255)
                                                                 cGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTga                        >  2:4180288/1‑93 (MQ=255)
                                                                  gTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgag                       >  1:4299305/1‑93 (MQ=255)
                                                                  gTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgag                       <  2:8584140/93‑1 (MQ=255)
                                                                  gTGAATTCAAAACAGCAAACAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgag                       >  2:7493538/1‑93 (MQ=255)
                                                                    gAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgagga                     >  1:483991/1‑93 (MQ=255)
                                                                    gAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgagga                     >  2:5771306/1‑93 (MQ=255)
                                                                     aaTTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgaggag                    >  1:4417840/1‑93 (MQ=255)
                                                                     aaTTCAAAACAGCAAGCAAACACAACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgaggag                    >  1:5408309/1‑93 (MQ=255)
                                                                       ttCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGtt                  >  2:3855665/1‑93 (MQ=255)
                                                                        tCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTg                 >  1:6172421/1‑93 (MQ=255)
                                                                        tCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTg                 <  2:3415657/93‑1 (MQ=255)
                                                                          aaaaCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGCTGcc               >  2:597425/1‑93 (MQ=255)
                                                                             aCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAc            <  1:8296819/93‑1 (MQ=255)
                                                                              cAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcc           >  1:2263081/1‑93 (MQ=255)
                                                                               agcaagcaAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAccc          <  1:8792/93‑1 (MQ=255)
                                                                               agcaagcaAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAccc          <  1:3259939/93‑1 (MQ=255)
                                                                                gcaagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcccc         >  2:289558/1‑93 (MQ=255)
                                                                                gcaagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcccc         <  2:1837448/93‑1 (MQ=255)
                                                                                gcaagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcccc         >  2:6087412/1‑93 (MQ=255)
                                                                                  aagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGc       >  2:7852268/1‑93 (MQ=255)
                                                                                   agcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCa      <  1:2078549/93‑1 (MQ=255)
                                                                                    gcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAg     >  2:7034883/1‑93 (MQ=255)
                                                                                    gcaaACGCCACACACTGTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAg     <  2:5256447/93‑1 (MQ=255)
                                                                                     caaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGGCCCCGCAgg    <  1:5711778/93‑1 (MQ=255)
                                                                                     caaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAgg    <  1:2530653/93‑1 (MQ=255)
                                                                                       aaCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTc  <  2:7589689/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC  >  NC_000913/3815984‑3816163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 213 total aligned reads displayed.
GGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAGCA  >  NC_000913/3815981‑3816167
                                                                                             |                                                                                             
GGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAATAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACG                                                                                               <  SRR4302541.1437019/94‑1 (MQ=60)
GGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAATAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACG                                                                                               <  SRR4302541.7638159/94‑1 (MQ=60)
GGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACG                                                                                               >  SRR4302541.3964482/1‑94 (MQ=60)
GGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAACGGGATTGCGTGAATTCAGAACAGCAAGCAAACG                                                                                               >  SRR4302541.438541/1‑94 (MQ=60)
 GTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGC                                                                                              >  SRR4302541.2746600/1‑94 (MQ=60)
 GTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGC                                                                                              >  SRR4302541.2746599/1‑94 (MQ=60)
   TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCA                                                                                            >  SRR4302541.8482882/1‑94 (MQ=60)
   TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCA                                                                                            >  SRR4302541.2134156/1‑94 (MQ=60)
    CAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCAC                                                                                           >  SRR4302541.7229516/1‑94 (MQ=60)
     AACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACA                                                                                          >  SRR4302541.3474214/1‑94 (MQ=60)
     AACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACA                                                                                          >  SRR4302541.2679414/1‑94 (MQ=60)
      ACAGAAGTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACAC                                                                                         <  SRR4302541.7633457/94‑1 (MQ=60)
      ACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACAC                                                                                         >  SRR4302541.8290422/1‑94 (MQ=60)
       CAGAACTGGCGGCTAATCTCTTTCGAGCTACTCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACA                                                                                        >  SRR4302541.6750561/1‑94 (MQ=60)
       CAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACA                                                                                        >  SRR4302541.6389816/1‑94 (MQ=60)
       CAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACA                                                                                        >  SRR4302541.8649632/1‑94 (MQ=60)
        AGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACAC                                                                                       >  SRR4302541.7127303/1‑94 (MQ=60)
        AGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACAC                                                                                       >  SRR4302541.2667761/1‑94 (MQ=60)
        AGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACAC                                                                                       <  SRR4302541.7093818/94‑1 (MQ=60)
        AGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACAC                                                                                       <  SRR4302541.6334986/94‑1 (MQ=60)
        AGAACTGGCGGCTAATCTCTGTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACAC                                                                                       <  SRR4302541.6334991/94‑1 (MQ=60)
           ACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAATAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTT                                                                                    <  SRR4302541.7540008/94‑1 (MQ=60)
           ACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTT                                                                                    <  SRR4302541.905688/94‑1 (MQ=60)
            CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG                                                                                   >  SRR4302541.7610010/1‑94 (MQ=60)
            CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG                                                                                   >  SRR4302541.3787613/1‑94 (MQ=60)
            CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG                                                                                   >  SRR4302541.3787611/1‑94 (MQ=60)
            CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG                                                                                   <  SRR4302541.4695256/94‑1 (MQ=60)
            CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG                                                                                   <  SRR4302541.3260706/94‑1 (MQ=60)
            CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG                                                                                   >  SRR4302541.1371132/1‑94 (MQ=60)
            CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG                                                                                   >  SRR4302541.7498916/1‑94 (MQ=60)
             TGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGA                                                                                  <  SRR4302541.3162718/94‑1 (MQ=60)
              GGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGAC                                                                                 >  SRR4302541.7295606/1‑94 (MQ=60)
              GGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGAC                                                                                 >  SRR4302541.7011989/1‑94 (MQ=60)
               GCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACG                                                                                <  SRR4302541.8282100/94‑1 (MQ=60)
                CGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGT                                                                               >  SRR4302541.1621808/1‑94 (MQ=60)
                 GGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTG                                                                              >  SRR4302541.2887806/1‑94 (MQ=60)
                 GGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTG                                                                              >  SRR4302541.4016965/1‑94 (MQ=60)
                 GGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTG                                                                              <  SRR4302541.5286876/94‑1 (MQ=60)
                 GGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTG                                                                              >  SRR4302541.1316349/1‑94 (MQ=60)
                 GGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTG                                                                              >  SRR4302541.2575070/1‑94 (MQ=60)
                  GCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGG                                                                             >  SRR4302541.2698773/1‑94 (MQ=60)
                   CTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGG                                                                            >  SRR4302541.4597676/1‑94 (MQ=60)
                   CTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGG                                                                            >  SRR4302541.5446670/1‑94 (MQ=60)
                   CTAAGCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGG                                                                            <  SRR4302541.227828/94‑1 (MQ=60)
                    TAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGT                                                                           >  SRR4302541.2429613/1‑94 (MQ=60)
                    TAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGT                                                                           >  SRR4302541.7982168/1‑94 (MQ=60)
                    TAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGT                                                                           >  SRR4302541.7366410/1‑94 (MQ=60)
                    TAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGG                                                                           >  SRR4302541.2429612/1‑94 (MQ=60)
                     AATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTC                                                                          >  SRR4302541.5118835/1‑94 (MQ=60)
                      ATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCG                                                                         <  SRR4302541.7912033/94‑1 (MQ=60)
                      ATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCG                                                                         <  SRR4302541.8489672/94‑1 (MQ=60)
                      ATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCG                                                                         >  SRR4302541.5745104/1‑94 (MQ=60)
                        CTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCA                                                                       <  SRR4302541.5060470/94‑1 (MQ=60)
                          CTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAAGAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAG                                                                     <  SRR4302541.794376/94‑1 (MQ=60)
                          CTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAG                                                                     >  SRR4302541.7567030/1‑94 (MQ=60)
                          CTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAG                                                                     <  SRR4302541.8404792/94‑1 (MQ=60)
                           TTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGG                                                                    <  SRR4302541.2062559/94‑1 (MQ=60)
                              CGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGA                                                                 <  SRR4302541.6421237/94‑1 (MQ=60)
                              CGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGA                                                                 >  SRR4302541.4235144/1‑94 (MQ=60)
                               GAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAG                                                                <  SRR4302541.8205289/94‑1 (MQ=60)
                               GAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAG                                                                <  SRR4302541.818031/94‑1 (MQ=60)
                               GAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAG                                                                >  SRR4302541.3308961/1‑94 (MQ=60)
                               GAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGCGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAG                                                                <  SRR4302541.7591635/94‑1 (MQ=60)
                                AGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGG                                                               >  SRR4302541.5128273/1‑94 (MQ=60)
                                AGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGG                                                               <  SRR4302541.524977/94‑1 (MQ=60)
                                AGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGG                                                               <  SRR4302541.8612117/94‑1 (MQ=60)
                                AGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGG                                                               >  SRR4302541.8827806/1‑94 (MQ=60)
                                AGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGG                                                               >  SRR4302541.2818293/1‑94 (MQ=60)
                                AGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGG                                                               <  SRR4302541.7287675/94‑1 (MQ=60)
                                AGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGG                                                               <  SRR4302541.5950433/94‑1 (MQ=60)
                                 GCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGC                                                              >  SRR4302541.3143535/1‑94 (MQ=60)
                                  CTACCCAAACAGAATAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGTAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCA                                                             <  SRR4302541.4958565/94‑1 (MQ=60)
                                  CTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGACGCAAGGTGAGGCA                                                             >  SRR4302541.4890755/1‑94 (MQ=60)
                                   TACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGCGGGTCGCAAGGTGAGGAAA                                                            >  SRR4302541.382444/1‑94 (MQ=60)
                                    ACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAA                                                           >  SRR4302541.1416828/1‑94 (MQ=60)
                                    ACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAA                                                           >  SRR4302541.7370393/1‑94 (MQ=60)
                                     CCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAAC                                                          >  SRR4302541.7035972/1‑94 (MQ=60)
                                     CCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAAC                                                          >  SRR4302541.565070/1‑94 (MQ=60)
                                      CCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAAGAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACC                                                         >  SRR4302541.2352391/1‑94 (MQ=60)
                                      CCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACC                                                         >  SRR4302541.5185661/1‑94 (MQ=60)
                                       CAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAAACA                                                        >  SRR4302541.330151/1‑94 (MQ=60)
                                       CAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGCCGCAAGGTGAGGCAAACCA                                                        >  SRR4302541.6725880/1‑94 (MQ=60)
                                        AAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCAT                                                       >  SRR4302541.7020245/1‑94 (MQ=60)
                                        AAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCAT                                                       <  SRR4302541.4279831/94‑1 (MQ=60)
                                          ACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTC                                                     <  SRR4302541.2090887/94‑1 (MQ=60)
                                           CAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCG                                                    >  SRR4302541.3139367/1‑94 (MQ=60)
                                           CAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCA                                                    >  SRR4302541.781454/1‑94 (MQ=60)
                                           CAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCA                                                    >  SRR4302541.8041042/1‑94 (MQ=60)
                                           CAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCA                                                    >  SRR4302541.2345630/1‑94 (MQ=60)
                                           CAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCA                                                    >  SRR4302541.2795466/1‑94 (MQ=60)
                                            AGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAG                                                   >  SRR4302541.7468172/1‑94 (MQ=60)
                                            AGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAG                                                   >  SRR4302541.2925874/1‑94 (MQ=60)
                                             GAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGG                                                  <  SRR4302541.5057722/94‑1 (MQ=60)
                                              AAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGA                                                 <  SRR4302541.1501783/94‑1 (MQ=60)
                                              AAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGAGAGGCAACCCATTCAGGA                                                 >  SRR4302541.2538980/1‑94 (MQ=60)
                                               AGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAC                                                >  SRR4302541.6197326/1‑94 (MQ=60)
                                               AGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAA                                                <  SRR4302541.6691021/94‑1 (MQ=60)
                                                GAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGGGAGGCAAACCATTCAGGAAT                                               >  SRR4302541.7680056/1‑94 (MQ=60)
                                                 AAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACT                                              >  SRR4302541.5166633/1‑94 (MQ=60)
                                                 AAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACT                                              >  SRR4302541.1963753/1‑94 (MQ=60)
                                                  AAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTT                                             <  SRR4302541.4435782/94‑1 (MQ=60)
                                                  AAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTT                                             <  SRR4302541.453165/94‑1 (MQ=60)
                                                  AAAACGCAAGCGGGGTGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTTACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTT                                             <  SRR4302541.453166/94‑1 (MQ=60)
                                                   AAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTG                                            <  SRR4302541.5855693/94‑1 (MQ=60)
                                                    AACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGG                                           >  SRR4302541.8893882/1‑94 (MQ=60)
                                                    AACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGG                                           >  SRR4302541.5818476/1‑94 (MQ=60)
                                                    AACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGG                                           >  SRR4302541.854833/1‑94 (MQ=60)
                                                    AACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGG                                           <  SRR4302541.3478296/94‑1 (MQ=60)
                                                    AACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGG                                           >  SRR4302541.1763851/1‑94 (MQ=60)
                                                      CTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCG                                         >  SRR4302541.8446909/1‑94 (MQ=60)
                                                      CTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCG                                         <  SRR4302541.4037080/94‑1 (MQ=60)
                                                      CTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCG                                         >  SRR4302541.7865771/1‑94 (MQ=60)
                                                       TCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGG                                        <  SRR4302541.6328530/94‑1 (MQ=60)
                                                        CAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGATGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGA                                       <  SRR4302541.6605335/94‑1 (MQ=60)
                                                        CAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGA                                       <  SRR4302541.7114733/94‑1 (MQ=60)
                                                        CAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGA                                       <  SRR4302541.1067900/94‑1 (MQ=60)
                                                        CAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGA                                       <  SRR4302541.1067894/94‑1 (MQ=60)
                                                         AAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAA                                      <  SRR4302541.244598/94‑1 (MQ=60)
                                                          AGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAAC                                     <  SRR4302541.4608986/94‑1 (MQ=60)
                                                          AGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAAC                                     <  SRR4302541.4292980/94‑1 (MQ=60)
                                                           GCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACC                                    <  SRR4302541.1790989/94‑1 (MQ=60)
                                                             GGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAT                                  >  SRR4302541.790723/1‑94 (MQ=60)
                                                             GGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAT                                  >  SRR4302541.1185222/1‑94 (MQ=60)
                                                             GGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAT                                  <  SRR4302541.7452452/94‑1 (MQ=60)
                                                              GGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACaatc                                 >  SRR4302541.7197631/1‑90 (MQ=60)
                                                              GGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATG                                 <  SRR4302541.4377796/94‑1 (MQ=60)
                                                              GGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATG                                 <  SRR4302541.1132995/94‑1 (MQ=60)
                                                              GGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATG                                 <  SRR4302541.7861014/94‑1 (MQ=60)
                                                               GATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGC                                >  SRR4302541.2218432/1‑94 (MQ=60)
                                                               GATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGC                                >  SRR4302541.3846568/1‑94 (MQ=60)
                                                                ATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCC                               >  SRR4302541.8469518/1‑94 (MQ=60)
                                                                ATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCC                               <  SRR4302541.4527544/94‑1 (MQ=60)
                                                                 TGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCT                              <  SRR4302541.415899/94‑1 (MQ=60)
                                                                  GGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGTCTG                             >  SRR4302541.5458346/1‑94 (MQ=60)
                                                                  GGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTG                             <  SRR4302541.2321799/94‑1 (MQ=60)
                                                                  GGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTG                             >  SRR4302541.6720550/1‑94 (MQ=60)
                                                                  GGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTG                             <  SRR4302541.3848638/94‑1 (MQ=60)
                                                                    CGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAG                           >  SRR4302541.4342242/1‑94 (MQ=60)
                                                                    CGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAG                           <  SRR4302541.5033093/94‑1 (MQ=60)
                                                                    CGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAG                           >  SRR4302541.2569895/1‑94 (MQ=60)
                                                                      TGAATTCAAAACGACAAGCAAACGCCACACACGTTGACGTGGGTCGCAAGGTGAGGCCAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGA                         <  SRR4302541.5604401/94‑1 (MQ=60)
                                                                      TGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGA                         <  SRR4302541.1178430/94‑1 (MQ=60)
                                                                      TGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGA                         >  SRR4302541.488575/1‑94 (MQ=60)
                                                                       GAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAG                        >  SRR4302541.4462160/1‑94 (MQ=60)
                                                                       GAATTCAAAACAGCAAGCAAACACAACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAG                        >  SRR4302541.5463790/1‑94 (MQ=60)
                                                                        AATTCAAAACAGCAAGCAAACGCCACGCACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGT                       >  SRR4302541.8703200/1‑94 (MQ=60)
                                                                        AATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGT                       >  SRR4302541.7714587/1‑94 (MQ=60)
                                                                        AATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGT                       >  SRR4302541.7252768/1‑94 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT                      >  SRR4302541.2570582/1‑94 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT                      >  SRR4302541.1078086/1‑94 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT                      <  SRR4302541.6941715/94‑1 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT                      >  SRR4302541.2837180/1‑94 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT                      >  SRR4302541.460311/1‑94 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT                      <  SRR4302541.3415607/94‑1 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT                      >  SRR4302541.5458365/1‑94 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT                      >  SRR4302541.5451792/1‑94 (MQ=60)
                                                                         ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGGGAGGCAAACCATTCAGGAACTTGGCGGACCCATGCCTGAGGAGTT                      >  SRR4302541.5458366/1‑94 (MQ=60)
                                                                          TTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTG                     <  SRR4302541.4734558/94‑1 (MQ=60)
                                                                          TTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTG                     <  SRR4302541.3456472/94‑1 (MQ=60)
                                                                          TTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTG                     >  SRR4302541.6235485/1‑94 (MQ=60)
                                                                          ATCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTG                     <  SRR4302541.480446/94‑1 (MQ=60)
                                                                           TCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGC                    <  SRR4302541.8433643/94‑1 (MQ=60)
                                                                           TCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGC                    >  SRR4302541.2295358/1‑94 (MQ=60)
                                                                            CAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCC                   <  SRR4302541.6254041/94‑1 (MQ=60)
                                                                            CAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGAGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCC                   >  SRR4302541.5410769/1‑94 (MQ=60)
                                                                             AAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCG                  <  SRR4302541.3275252/94‑1 (MQ=60)
                                                                              AAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGA                 >  SRR4302541.1640097/1‑94 (MQ=60)
                                                                               AACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAC                >  SRR4302541.1979311/1‑94 (MQ=60)
                                                                               AACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGGGAGGCAAACCATTCAGGAACTGGGCGGAACCATGCCTGAGGAGTTGCCGAC                >  SRR4302541.73733/1‑94 (MQ=60)
                                                                                ACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACC               <  SRR4302541.8387042/94‑1 (MQ=60)
                                                                                ACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACC               >  SRR4302541.886135/1‑94 (MQ=60)
                                                                                ACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACC               >  SRR4302541.2284932/1‑94 (MQ=60)
                                                                                 CAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCC              >  SRR4302541.5824649/1‑94 (MQ=60)
                                                                                 CAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCC              <  SRR4302541.4720776/94‑1 (MQ=60)
                                                                                  AGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCG             >  SRR4302541.7056682/1‑94 (MQ=60)
                                                                                  AGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCC             >  SRR4302541.7012677/1‑94 (MQ=60)
                                                                                  AGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCC             <  SRR4302541.8849/94‑1 (MQ=60)
                                                                                  AGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCC             <  SRR4302541.3105316/94‑1 (MQ=60)
                                                                                  AGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCC             >  SRR4302541.191604/1‑94 (MQ=60)
                                                                                  AGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCC             <  SRR4302541.3292843/94‑1 (MQ=60)
                                                                                   GCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCG            >  SRR4302541.1662146/1‑94 (MQ=60)
                                                                                   GCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCG            <  SRR4302541.4436447/94‑1 (MQ=60)
                                                                                     AAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCA          <  SRR4302541.7452313/94‑1 (MQ=60)
                                                                                     AAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCA          >  SRR4302541.6848236/1‑94 (MQ=60)
                                                                                     AAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCA          >  SRR4302541.2455440/1‑94 (MQ=60)
                                                                                      AGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAG         <  SRR4302541.3319201/94‑1 (MQ=60)
                                                                                      AGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAG         >  SRR4302541.1428381/1‑94 (MQ=60)
                                                                                      AGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAG         <  SRR4302541.2098663/94‑1 (MQ=60)
                                                                                        CAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGGCCCCGCAGGT       <  SRR4302541.5770020/94‑1 (MQ=60)
                                                                                        CAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGT       <  SRR4302541.2556084/94‑1 (MQ=60)
                                                                                         AAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGTACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC      >  SRR4302541.6219201/1‑94 (MQ=60)
                                                                                         AAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC      >  SRR4302541.8641697/1‑94 (MQ=60)
                                                                                          AACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCA     <  SRR4302541.3637480/94‑1 (MQ=60)
                                                                                          AACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCA     >  SRR4302541.1780331/1‑94 (MQ=60)
                                                                                           ACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAG    >  SRR4302541.3649916/1‑94 (MQ=60)
                                                                                           ACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAG    >  SRR4302541.3649917/1‑94 (MQ=60)
                                                                                            CGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAGC   >  SRR4302541.84673/1‑94 (MQ=60)
                                                                                             GCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAGCA  >  SRR4302541.1600448/1‑94 (MQ=60)
                                                                                             GCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAGCA  <  SRR4302541.4720158/94‑1 (MQ=60)
                                                                                             GCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAGCA  <  SRR4302541.7905269/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAGCA  >  NC_000913/3815981‑3816167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑