Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,816,074 |
A→G |
T234A (ACC→GCC) |
dinD → |
DNA‑damage‑inducible protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,816,074 | 0 | A | G | 100.0%
| 865.5
/ NA
| 248 | T234A (ACC→GCC) | dinD | DNA‑damage‑inducible protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (139/109); total (139/109) |
Only 100 of 263 total aligned reads displayed.
TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC > NC_000913/3815984‑3816163
|
tCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAAcgcc < 2:49905/93‑1 (MQ=255)
tCAACAGAACTGGCGGCTAATCGCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAAcgcc < 1:1543645/93‑1 (MQ=255)
cAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGCTGGGGTGAATTCAAAACAGCAAGCAAAcgcca > 1:5251286/1‑93 (MQ=255)
aCAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcaca > 1:6476195/1‑93 (MQ=255)
aCAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcaca > 2:2598323/1‑93 (MQ=255)
cAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacac > 1:1339698/1‑93 (MQ=255)
cAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacac < 1:6398938/93‑1 (MQ=255)
aGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCcacacc > 1:4943187/1‑92 (MQ=255)
gAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCacacac > 2:3344550/1‑93 (MQ=255)
gAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCacacac < 1:2072102/93‑1 (MQ=255)
gAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCacacac > 2:6294606/1‑93 (MQ=255)
aaCTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACt > 2:3650198/1‑93 (MQ=255)
aCTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACtt < 2:871063/93‑1 (MQ=255)
cTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACttt < 1:2304458/93‑1 (MQ=255)
cTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACttt < 1:5007380/93‑1 (MQ=255)
cTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACttt < 1:1271356/93‑1 (MQ=255)
tGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTg < 2:4488118/93‑1 (MQ=255)
ggcggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGa < 2:1410999/93‑1 (MQ=255)
cggcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACg > 2:6102927/1‑93 (MQ=255)
gcTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTg < 2:949430/93‑1 (MQ=255)
tAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTggg < 2:4064679/93‑1 (MQ=255)
aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGt < 1:515124/93‑1 (MQ=255)
aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGt < 1:5302191/93‑1 (MQ=255)
aaTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGt < 1:6271713/93‑1 (MQ=255)
aTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTc > 1:2102304/1‑93 (MQ=255)
aTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTc > 1:1058333/1‑93 (MQ=255)
aTCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTc > 2:2566247/1‑93 (MQ=255)
tctTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCa < 2:3062572/93‑1 (MQ=255)
tctTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCa > 1:2808473/1‑93 (MQ=255)
tctTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCa > 1:2633151/1‑93 (MQ=255)
ctTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCaa < 2:2100554/93‑1 (MQ=255)
ctTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCaa < 2:1186477/93‑1 (MQ=255)
ctTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTCACGTGGGTCGCaa < 1:6200795/93‑1 (MQ=255)
tttCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAg < 2:2719131/93‑1 (MQ=255)
tttCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAg > 2:3909078/1‑93 (MQ=255)
tttCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAg < 1:6243003/93‑1 (MQ=255)
tCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGt < 1:3996182/93‑1 (MQ=255)
cGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTg < 2:1696617/93‑1 (MQ=255)
gAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGa > 2:1283480/1‑93 (MQ=255)
gAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGa < 1:2761021/93‑1 (MQ=255)
tACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCa > 2:3250375/1‑93 (MQ=255)
tACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCa > 2:1905891/1‑93 (MQ=255)
tACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCa > 1:5518691/1‑93 (MQ=255)
aCCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTGTGACTTGGGGCGCTAGATGAGGCaa > 1:4263572/1‑93 (MQ=255)
cccAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCaaa > 2:4103202/1‑93 (MQ=255)
aaCAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCAt > 2:5717697/1‑93 (MQ=255)
aCAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCAtt > 2:5293805/1‑93 (MQ=255)
cAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTc > 1:2184654/1‑93 (MQ=255)
aagaagaAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACCCTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTc < 1:308883/92‑1 (MQ=255)
gaagaaAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAg < 1:4162569/93‑1 (MQ=255)
gaagaaAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAg > 1:3487705/1‑93 (MQ=255)
aagaaAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAgg > 2:6250586/1‑93 (MQ=255)
aagaaAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAgg > 2:3451226/1‑93 (MQ=255)
agaaAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGa > 1:3331977/1‑93 (MQ=255)
aaaaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAAc > 2:2056834/1‑93 (MQ=255)
aaaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACt > 1:1422693/1‑93 (MQ=255)
aaaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAAcct < 1:6370642/93‑3 (MQ=255)
aaCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTg > 1:5329325/1‑93 (MQ=255)
aCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTgg > 2:6178678/1‑93 (MQ=255)
tCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCg > 1:1850926/1‑93 (MQ=255)
cAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCgg < 2:1946200/93‑1 (MQ=255)
aGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGaa > 1:3389357/1‑93 (MQ=255)
gggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCa < 1:4357331/93‑1 (MQ=255)
ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt < 2:513431/93‑1 (MQ=255)
ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt < 1:453277/93‑1 (MQ=255)
ggATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAt < 1:6053453/93‑1 (MQ=255)
gATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATg > 2:158550/1‑93 (MQ=255)
gATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATg > 2:5992901/1‑93 (MQ=255)
gATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATg < 2:4916253/93‑1 (MQ=255)
aTGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGc > 2:3300763/1‑93 (MQ=255)
cGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTga > 1:5921134/1‑93 (MQ=255)
tGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTgagg < 2:5254981/93‑1 (MQ=255)
aTTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGt < 1:972497/93‑1 (MQ=255)
aTTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGt < 2:4710766/93‑1 (MQ=255)
ttCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGtt > 1:4659190/1‑93 (MQ=255)
ttCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGtt < 1:5745499/93‑1 (MQ=255)
ttCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGtt > 2:4829158/1‑93 (MQ=255)
tCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTg > 2:4431659/1‑93 (MQ=255)
cAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGc < 1:4198175/93‑1 (MQ=255)
aaaaCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGcc < 1:1185425/93‑1 (MQ=255)
aaaaCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGcc > 1:3710822/1‑93 (MQ=255)
aaaCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCg > 2:2452353/1‑93 (MQ=255)
aaaCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGACg > 1:3857398/1‑93 (MQ=255)
aaCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGa > 2:1997205/1‑93 (MQ=255)
aaCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGa < 2:5842952/93‑1 (MQ=255)
aCAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAc > 2:3621756/1‑93 (MQ=255)
gcaagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcccc < 2:722556/93‑1 (MQ=255)
gcaagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAcccc < 2:3740791/93‑1 (MQ=255)
caagcaaCCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCg < 1:874607/93‑1 (MQ=255)
caagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCg < 1:2971810/93‑1 (MQ=255)
caagcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCg > 2:896256/1‑93 (MQ=255)
agcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCa < 2:4210985/93‑1 (MQ=255)
gcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAg > 1:2447576/1‑93 (MQ=255)
gcaaACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAg > 2:1332883/1‑93 (MQ=255)
aaaCGCCACACTCTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGt < 2:4346634/93‑1 (MQ=255)
aaaCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGt > 1:1767560/1‑93 (MQ=255)
aaaCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGt > 2:5788569/1‑93 (MQ=255)
aaCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTc > 2:3770642/1‑93 (MQ=255)
aaCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTc < 1:1474005/93‑1 (MQ=255)
aaCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTc < 1:2050388/93‑1 (MQ=255)
|
TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC > NC_000913/3815984‑3816163
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAG > NC_000913/3815983‑3816165
|
TTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCC < SRR4302534.1160811/94‑1 (MQ=60)
TTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCC < SRR4302534.2059360/94‑1 (MQ=60)
TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGCTGGGGTGAATTCAAAACAGCAAGCAAACGCCA > SRR4302534.5393168/1‑94 (MQ=60)
TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCA > SRR4302534.6241781/1‑94 (MQ=60)
TCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCA < SRR4302534.1815904/94‑1 (MQ=60)
TCAACAGAACTGGCGGCTAATCGCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCA < SRR4302534.1584104/94‑1 (MQ=60)
AACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACA > SRR4302534.6650681/1‑94 (MQ=60)
ACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACAC > SRR4302534.1375009/1‑94 (MQ=60)
CAGAACTGGCGGCTAATCTCTTTCGAGCTTACCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACA > SRR4302534.4104722/1‑94 (MQ=60)
CAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACC > SRR4302534.5077113/1‑94 (MQ=60)
CAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACA < SRR4302534.6571741/94‑1 (MQ=60)
CAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACA > SRR4302534.2876036/1‑94 (MQ=60)
AGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACAC < SRR4302534.4647989/94‑1 (MQ=60)
GAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACT > SRR4302534.5393400/1‑94 (MQ=60)
GAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACT > SRR4302534.5124034/1‑94 (MQ=60)
GAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACT < SRR4302534.2126313/94‑1 (MQ=60)
CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG < SRR4302534.5142725/94‑1 (MQ=60)
CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG < SRR4302534.2365622/94‑1 (MQ=60)
CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG < SRR4302534.1304830/94‑1 (MQ=60)
CTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTG < SRR4302534.2974621/94‑1 (MQ=60)
TGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGA > SRR4302534.2197993/1‑94 (MQ=60)
TGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGA < SRR4302534.3632736/94‑1 (MQ=60)
CGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGT > SRR4302534.3895107/1‑94 (MQ=60)
GGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTG < SRR4302534.3526778/94‑1 (MQ=60)
AATCTCTTTCGAGCTACCCAAACAGAAGAAAATCTCAAGCGGGATGGCGTGAATGCAAAACAGCAAGCAAACGCCGCACGCTTTGACGTGGGTC < SRR4302534.4258046/94‑1 (MQ=60)
AATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTC > SRR4302534.1085748/1‑94 (MQ=60)
AATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTC > SRR4302534.2157494/1‑94 (MQ=60)
AATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTC < SRR4302534.527940/94‑1 (MQ=60)
AATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTC < SRR4302534.5445262/94‑1 (MQ=60)
AATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTC < SRR4302534.6441516/94‑1 (MQ=60)
ATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCG > SRR4302534.5306923/1‑94 (MQ=60)
CTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCA > SRR4302534.2882319/1‑94 (MQ=60)
CTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCA < SRR4302534.2307708/94‑1 (MQ=60)
CTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCA > SRR4302534.2702828/1‑94 (MQ=60)
TCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAA > SRR4302534.5223270/1‑94 (MQ=60)
CTTTCGAGCTACCCAAACAGAAGAAAAGCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAG < SRR4302534.1485826/94‑1 (MQ=60)
CTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAG < SRR4302534.697188/94‑1 (MQ=60)
CTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAG > SRR4302534.5768418/1‑94 (MQ=60)
CTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTCACGTGGGTCGCAAG < SRR4302534.6369453/94‑1 (MQ=60)
TTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGG < SRR4302534.6412376/94‑1 (MQ=60)
TTCGAGCTACCCAAACAGAATAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGT < SRR4302534.1599260/94‑1 (MQ=60)
TTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGT > SRR4302534.6449188/1‑94 (MQ=60)
TCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTG < SRR4302534.4103160/94‑1 (MQ=60)
GATCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAG > SRR4302534.2121489/1‑94 (MQ=60)
GAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAG < SRR4302534.2833741/94‑1 (MQ=60)
GAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAG > SRR4302534.5458604/1‑94 (MQ=60)
TGCTACGCAAACAGAAGAAAAACTCAAGCGGGAAGGCGGGGAATCAAAACAGCAAGCAAAAGCCACACACTTTTAAGTGGGGCGCAAGGgaggg > SRR4302534.4020015/1‑89 (MQ=31)
AGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGG > SRR4302534.6419943/1‑94 (MQ=60)
GCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGC > SRR4302534.1132284/1‑94 (MQ=60)
CTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCA > SRR4302534.5667601/1‑94 (MQ=60)
TACCCAAACAGAAGAAAATCTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAA < SRR4302534.2953594/94‑1 (MQ=60)
TACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAA > SRR4302534.5365894/1‑94 (MQ=60)
TACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTGTGACTTGGGGCGCTAGATGAGGCAA > SRR4302534.4378732/1‑94 (MQ=60)
CCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAAC > SRR4302534.445329/1‑94 (MQ=60)
CCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAAC > SRR4302534.6240354/1‑94 (MQ=60)
CCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACC > SRR4302534.1707396/1‑94 (MQ=60)
AAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCAT > SRR4302534.5880106/1‑94 (MQ=60)
AACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATT > SRR4302534.3848972/1‑94 (MQ=60)
AACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATT > SRR4302534.4079510/1‑94 (MQ=60)
ACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTC > SRR4302534.2714266/1‑94 (MQ=60)
ACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTC > SRR4302534.2242412/1‑94 (MQ=60)
ACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTC > SRR4302534.4204128/1‑94 (MQ=60)
CAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCA > SRR4302534.1233308/1‑94 (MQ=60)
CAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCA > SRR4302534.6555037/1‑94 (MQ=60)
AAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACCCTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCA < SRR4302534.316862/94‑1 (MQ=60)
AGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAG > SRR4302534.3581441/1‑94 (MQ=60)
AGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAG > SRR4302534.1531933/1‑94 (MQ=60)
AGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAG > SRR4302534.4987054/1‑94 (MQ=60)
GAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGG < SRR4302534.4275005/94‑1 (MQ=60)
AAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGA > SRR4302534.1493802/1‑94 (MQ=60)
AAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGA > SRR4302534.3421110/1‑94 (MQ=60)
AAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGA > SRR4302534.1354271/1‑94 (MQ=60)
AAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGA > SRR4302534.2082726/1‑94 (MQ=60)
AGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACAATTCAGGAA > SRR4302534.2144911/1‑94 (MQ=60)
GAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAAC > SRR4302534.309088/1‑94 (MQ=60)
AAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACT > SRR4302534.2523184/1‑94 (MQ=60)
AAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACT > SRR4302534.3449022/1‑94 (MQ=60)
AAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACT > SRR4302534.1460128/1‑94 (MQ=60)
AAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTT < SRR4302534.2527689/94‑1 (MQ=60)
AAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTG > SRR4302534.5473057/1‑94 (MQ=60)
AAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTG < SRR4302534.954755/94‑1 (MQ=60)
AAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTG < SRR4302534.4296869/94‑1 (MQ=60)
AAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACCTG < SRR4302534.6542644/94‑1 (MQ=60)
AACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGG < SRR4302534.2107894/94‑1 (MQ=60)
AACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGG < SRR4302534.6615882/94‑1 (MQ=60)
CTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCG > SRR4302534.1899075/1‑94 (MQ=60)
TCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGG < SRR4302534.644574/94‑1 (MQ=60)
CAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGA > SRR4302534.1845247/1‑94 (MQ=60)
CAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGA < SRR4302534.755966/94‑1 (MQ=60)
AAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAA > SRR4302534.5623380/1‑94 (MQ=60)
AAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAA < SRR4302534.6375556/94‑1 (MQ=60)
AAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAA > SRR4302534.3480261/1‑94 (MQ=60)
GGGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCAT < SRR4302534.4474911/94‑1 (MQ=60)
GGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATG < SRR4302534.6218064/94‑1 (MQ=60)
GGATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATG < SRR4302534.464760/94‑1 (MQ=60)
GATGGCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGC > SRR4302534.3300830/1‑94 (MQ=60)
GCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGA > SRR4302534.6081899/1‑94 (MQ=60)
GCGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGA > SRR4302534.6644482/1‑94 (MQ=60)
CGTGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAG < SRR4302534.4674371/94‑1 (MQ=60)
TGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGA > SRR4302534.467410/1‑94 (MQ=60)
TGAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGA < SRR4302534.4287245/94‑1 (MQ=60)
GAATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAG < SRR4302534.1246219/94‑1 (MQ=60)
AATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGT > SRR4302534.5452458/1‑94 (MQ=60)
ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT < SRR4302534.997272/94‑1 (MQ=60)
ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT < SRR4302534.4935569/94‑1 (MQ=60)
ATTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTT > SRR4302534.4785699/1‑94 (MQ=60)
TTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTG < SRR4302534.5901284/94‑1 (MQ=60)
TTCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTG < SRR4302534.4436894/94‑1 (MQ=60)
TCAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGC > SRR4302534.3354417/1‑94 (MQ=60)
CAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCC > SRR4302534.3810589/1‑94 (MQ=60)
CAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCC < SRR4302534.4311560/94‑1 (MQ=60)
CAAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCC > SRR4302534.4326497/1‑94 (MQ=60)
AAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCG < SRR4302534.5202082/94‑1 (MQ=60)
AAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCA < SRR4302534.1216588/94‑1 (MQ=60)
AAAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGACG > SRR4302534.3960955/1‑94 (MQ=60)
AAACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGA > SRR4302534.145017/1‑94 (MQ=60)
AACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGAC > SRR4302534.6410102/1‑94 (MQ=60)
ACAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACC < SRR4302534.5914341/94‑1 (MQ=60)
CAGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCC > SRR4302534.3774678/1‑94 (MQ=60)
AGCAAGCAACCGCCACACACTGTGACGTGGGTCGGAAGGTGAGGCAAACCATGCAGGAACTGGGCGGAACCATGCCTGAGGAGTTGCCGACCCC < SRR4302534.2746611/94‑1 (MQ=60)
AGCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCC < SRR4302534.6163659/94‑1 (MQ=60)
GCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCG > SRR4302534.2470275/1‑94 (MQ=60)
GCAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCG > SRR4302534.2218232/1‑94 (MQ=60)
CAAGCAACCGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGC < SRR4302534.896724/94‑1 (MQ=60)
CAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGATCCCGC > SRR4302534.6041816/1‑94 (MQ=60)
CAAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGC < SRR4302534.3049617/94‑1 (MQ=60)
AAGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCA > SRR4302534.1453459/1‑94 (MQ=60)
AGCAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAG > SRR4302534.2512614/1‑94 (MQ=60)
CAAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGT > SRR4302534.1813465/1‑94 (MQ=60)
AAACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTC > SRR4302534.2247717/1‑94 (MQ=60)
AACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCA < SRR4302534.1512788/94‑1 (MQ=60)
AACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCA < SRR4302534.3442630/94‑1 (MQ=60)
AACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCA < SRR4302534.2103964/94‑1 (MQ=60)
ACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAG < SRR4302534.4438991/94‑1 (MQ=60)
ACGCCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAG > SRR4302534.2782475/1‑94 (MQ=60)
|
TTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAG > NC_000913/3815983‑3816165
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
