Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,853,551	T→C	Q16R (CAG→CGG)	yidG ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,853,551	0	T	C	99.7%	1200.4 / ‑5.2	349	Q16R (CAG→CGG)	yidG	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (154/194); minor base A (0/1); total (154/195)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.63e-01

Only 100 of 361 total aligned reads displayed.

GCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATAT  >  NC_000913/3853461‑3853640

 ccTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCa                                                                                        >  1:1304641/1‑93 (MQ=255)

 ccTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCa                                                                                        <  1:4865674/93‑1 (MQ=255)

 ccTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCa                                                                                        <  1:3708511/93‑1 (MQ=255)

  cTGGTGCCAGTTGTGTTTGATAGCCAGCGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAg                                                                                       <  1:3620541/93‑1 (MQ=255)

   tGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGt                                                                                      >  2:7195227/1‑93 (MQ=255)

    ggTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTc                                                                                     >  2:1068641/1‑93 (MQ=255)

     gTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTcc                                                                                    <  1:8314101/93‑1 (MQ=255)

     gTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTcc                                                                                    <  1:6769300/93‑1 (MQ=255)

     gTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTcc                                                                                    >  1:5388954/1‑93 (MQ=255)

     gTGCCAATTGTGTTTGATAGCCAACGACATCAACGCGCCGTAGCGCAGCACGGCACGAAACCCCGCCAGTGATGTGCGCTCGGGCAGCAGGcc                                                                                    >  2:4236880/1‑93 (MQ=255)

      tGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTccg                                                                                   >  2:2007509/1‑92 (MQ=255)

       gCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTg                                                                                  <  2:724146/93‑1 (MQ=255)

       gCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTg                                                                                  <  1:1232951/93‑1 (MQ=255)

       gCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTg                                                                                  >  2:2515191/1‑93 (MQ=255)

          aGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGt                                                                               <  2:4695186/93‑1 (MQ=255)

           gTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTc                                                                              <  1:8178802/93‑1 (MQ=255)

            ttGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCg                                                                             >  1:8387851/1‑93 (MQ=255)

            ttGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCg                                                                             >  1:8660863/1‑93 (MQ=255)

             tgtgTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCgg                                                                            >  1:7994242/1‑93 (MQ=255)

              ttgtTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGc                                                                           <  2:7458358/92‑1 (MQ=255)

               tgtTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCa                                                                          <  2:3599902/93‑1 (MQ=255)

                ttttGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCaa                                                                         <  2:7405682/92‑1 (MQ=255)

                gtTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCaa                                                                         <  1:1962622/93‑1 (MQ=255)

                gtTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCaa                                                                         <  2:5480082/93‑1 (MQ=255)

                 tttGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAAt                                                                        <  2:6952766/93‑1 (MQ=255)

                  ttGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATg                                                                       <  2:3261368/93‑1 (MQ=255)

                    gATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCg                                                                     >  1:6128629/1‑93 (MQ=255)

                    gATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCg                                                                     >  1:6313448/1‑93 (MQ=255)

                      tAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTc                                                                   <  1:6908172/93‑1 (MQ=255)

                      tAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTc                                                                   <  2:4919866/93‑1 (MQ=255)

                      aaGCCACCGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTc                                                                   <  2:7792017/92‑1 (MQ=255)

                        gCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTg                                                                 <  1:2290470/93‑1 (MQ=255)

                        gCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTg                                                                 >  2:2850572/1‑93 (MQ=255)

                          cAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGc                                                               >  2:8207818/1‑93 (MQ=255)

                           aaCGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCt                                                              >  2:1344178/1‑93 (MQ=255)

                           aaCGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCt                                                              <  2:6728894/93‑1 (MQ=255)

                             cGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCttt                                                            <  2:3101138/93‑1 (MQ=255)

                              gCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTg                                                           <  1:3231705/93‑1 (MQ=255)

                               ccATCAGCGCGCCGTAGCCCAGCATGGTACTAAACCACGCCAGTGATGTGCGCTCCGTCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGc                                                          <  1:1457531/93‑1 (MQ=255)

                               ccATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGc                                                          <  2:4381389/93‑1 (MQ=255)

                               ccATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGc                                                          >  1:4265298/1‑93 (MQ=255)

                               ccATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGc                                                          <  1:3827014/93‑1 (MQ=255)

                                cATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCg                                                         <  1:5580651/93‑1 (MQ=255)

                                 aTCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCgg                                                        >  2:1676963/1‑93 (MQ=255)

                                 aTCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCgg                                                        >  2:246949/1‑93 (MQ=255)

                                 aTCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCgg                                                        >  1:3348971/1‑93 (MQ=255)

                                  tCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCATTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGc                                                       >  1:7501030/1‑93 (MQ=255)

                                   cAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCt                                                      <  2:4268204/93‑1 (MQ=255)

                                    aaCGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTa                                                     >  2:8521064/1‑93 (MQ=255)

                                    aaCGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTa                                                     >  1:5685028/1‑93 (MQ=255)

                                    aaCGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTa                                                     >  1:304654/1‑93 (MQ=255)

                                     aCGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTAt                                                    >  1:7195483/1‑93 (MQ=255)

                                     aCGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTAt                                                    >  1:350648/1‑93 (MQ=255)

                                     aCGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCCAt                                                    >  2:5870063/1‑93 (MQ=255)

                                       gcgcCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCCGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATcc                                                  <  1:732966/93‑1 (MQ=255)

                                       gcgcCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATcc                                                  <  2:2613998/93‑1 (MQ=255)

                                       gcgcCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATcc                                                  <  2:6497626/93‑1 (MQ=255)

                                         gcCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCgg                                                >  2:7996190/1‑93 (MQ=255)

                                           cGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCa                                              <  1:2076998/93‑1 (MQ=255)

                                           cGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCAGCAATGCGTCTGGCTTTGCGGCTATCCGGCa                                              >  2:6116863/1‑93 (MQ=255)

                                            gTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCAt                                             >  1:3986417/1‑93 (MQ=255)

                                            gTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCAt                                             >  1:4199209/1‑93 (MQ=255)

                                             tAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATa                                            <  2:7673885/93‑1 (MQ=255)

                                             tAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATa                                            >  1:1038566/1‑93 (MQ=255)

                                             tAGCCCAGCATGGTACGAAACCAAGCCAGAGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGAGGCTATCCGCCAtc                                            >  1:2413295/1‑92 (MQ=255)

                                              aGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATac                                           >  1:5891442/1‑93 (MQ=255)

                                               gCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATaca                                          >  2:8311932/1‑93 (MQ=255)

                                                 ccAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATacaac                                        >  2:2208251/1‑93 (MQ=255)

                                                  cAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATacaaca                                       <  2:3973241/93‑1 (MQ=255)

                                                    gCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACANCAcc                                     <  1:6271680/93‑1 (MQ=255)

                                                      aTGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAg                                   <  1:3819002/93‑1 (MQ=255)

                                                      aTGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAg                                   >  1:956212/1‑93 (MQ=255)

                                                       tGGCACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATGCGGCATACAACACCAgc                                  >  2:873336/1‑92 (MQ=255)

                                                           aCGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAAGACAAGTCCCa                              >  2:3953553/1‑93 (MQ=255)

                                                            cGAAACCACGCCAGTGATGTGCGCTCCGTCCGCAGTCCTGGGTCTGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCAt                             <  1:7673883/93‑1 (MQ=255)

                                                            cGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCAt                             <  2:1142333/93‑1 (MQ=255)

                                                            cGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCAt                             >  2:5229121/1‑93 (MQ=255)

                                                             gAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATa                            <  2:86146/93‑1 (MQ=255)

                                                             gAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATa                            >  2:181344/1‑93 (MQ=255)

                                                              aaaCCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATaa                           >  1:1105073/1‑93 (MQ=255)

                                                               aaCCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAAc                          <  1:454502/93‑1 (MQ=255)

                                                                aCCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACg                         >  1:2742556/1‑93 (MQ=255)

                                                                  cACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGAt                       >  2:6296472/1‑93 (MQ=255)

                                                                  cACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGAt                       <  1:2893599/93‑1 (MQ=255)

                                                                   aCGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATc                      >  2:7878215/1‑93 (MQ=255)

                                                                    cGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCa                     <  2:4480597/93‑1 (MQ=255)

                                                                    cGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCa                     <  1:2506766/93‑1 (MQ=255)

                                                                    cGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCa                     <  1:5105491/93‑1 (MQ=255)

                                                                     ggcAGTGATGTGCCCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCAc                    <  1:1915222/91‑1 (MQ=255)

                                                                       cAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCAccc                  >  1:4507891/1‑92 (MQ=255)

                                                                           gATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCAc              <  1:7770796/93‑1 (MQ=255)

                                                                             tgtgCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCATTCCCATAACGATCACCGCCACGa            >  2:4798871/1‑93 (MQ=255)

                                                                             tgtgCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGa            <  1:8274235/93‑1 (MQ=255)

                                                                              gtgCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGAc           >  2:151598/1‑93 (MQ=255)

                                                                                 cgcTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCAt        >  2:3584207/1‑93 (MQ=255)

                                                                                   cTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCa      >  1:3195600/1‑93 (MQ=255)

                                                                                     ccGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAat    >  1:6355890/1‑93 (MQ=255)

                                                                                     ccGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAat    <  1:6614877/93‑1 (MQ=255)

                                                                                      cGGCCGAAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGAATACAACAACAGTCCCATAACGATCTCCGCCACGACCATCaaga   <  2:5515353/93‑3 (MQ=255)

                                                                                       ggCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAatat  >  2:3766768/1‑93 (MQ=255)

GCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATAT  >  NC_000913/3853461‑3853640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAA  >  NC_000913/3853458‑3853643

CCCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCC                                                                                              <  SRR4302541.1590627/94‑1 (MQ=60)

CCCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCC                                                                                              >  SRR4302541.872351/1‑94 (MQ=60)

CCCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCC                                                                                              >  SRR4302541.4807762/1‑94 (MQ=60)

CCCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCC                                                                                              <  SRR4302541.5617925/94‑1 (MQ=60)

 CCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCG                                                                                             >  SRR4302541.8113996/1‑94 (MQ=60)

 CCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCG                                                                                             <  SRR4302541.584916/94‑1 (MQ=60)

   GCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCA                                                                                           >  SRR4302541.1317497/1‑94 (MQ=60)

    CCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAG                                                                                          <  SRR4302541.4915311/94‑1 (MQ=60)

    CCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAG                                                                                          <  SRR4302541.8447521/94‑1 (MQ=60)

    CCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAG                                                                                          <  SRR4302541.3745945/94‑1 (MQ=60)

     CTGTTGACAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGT                                                                                         <  SRR4302541.8383644/94‑1 (MQ=60)

     CTGGTGCCAGTTGTGTTTGATAGCCAGCGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGT                                                                                         <  SRR4302541.3657245/94‑1 (MQ=60)

     CTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGC                                                                                         >  SRR4302541.6362157/1‑94 (MQ=60)

       GGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCC                                                                                       <  SRR4302541.5232542/94‑1 (MQ=60)

       GGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCC                                                                                       <  SRR4302541.2356150/94‑1 (MQ=60)

       GGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCC                                                                                       >  SRR4302541.5141967/1‑94 (MQ=60)

       GGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCC                                                                                       >  SRR4302541.5444274/1‑94 (MQ=60)

        GTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCT                                                                                      <  SRR4302541.3859760/94‑1 (MQ=60)

        GTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCT                                                                                      >  SRR4302541.4520650/1‑94 (MQ=60)

        GTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCT                                                                                      <  SRR4302541.6841696/94‑1 (MQ=60)

        GTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCT                                                                                      >  SRR4302541.3204364/1‑94 (MQ=60)

        GTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCT                                                                                      <  SRR4302541.7594369/94‑1 (MQ=60)

        GTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCT                                                                                      <  SRR4302541.949907/94‑1 (MQ=60)

        GTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCT                                                                                      <  SRR4302541.8404459/94‑1 (MQ=60)

        GTGCCAGTTGTGTTTGATAGCCAACGCCAGCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCT                                                                                      <  SRR4302541.3373642/94‑1 (MQ=60)

         GGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTG                                                                                     <  SRR4302541.6559383/94‑1 (MQ=60)

          GCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGG                                                                                    <  SRR4302541.1245082/94‑1 (MQ=60)

          GCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGG                                                                                    <  SRR4302541.1929962/94‑1 (MQ=60)

          GCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGG                                                                                    <  SRR4302541.3585734/94‑1 (MQ=60)

          GCCAGTTGTCATTGAGACCCAACGCCACCCACGCGCCGTAGCCCAGACTGGTACGAACCCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGG                                                                                    <  SRR4302541.3242753/94‑1 (MQ=46)

          GCCAGGTGTGGTTGATACCCAACGCCATCAACGCGCCGTATCCCTGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGG                                                                                    <  SRR4302541.1245081/94‑1 (MQ=60)

           CCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGG                                                                                   <  SRR4302541.2043397/94‑1 (MQ=60)

           CCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGG                                                                                   <  SRR4302541.3417385/94‑1 (MQ=60)

            CAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGT                                                                                  <  SRR4302541.3235133/94‑1 (MQ=60)

            CAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGT                                                                                  <  SRR4302541.3235135/94‑1 (MQ=60)

            CAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGC                                                                                  >  SRR4302541.3905960/1‑94 (MQ=60)

             AGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTC                                                                                 <  SRR4302541.2389901/94‑1 (MQ=60)

             AGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTC                                                                                 <  SRR4302541.7384133/94‑1 (MQ=60)

              GTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCG                                                                                <  SRR4302541.8268100/94‑1 (MQ=60)

              GTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCG                                                                                >  SRR4302541.8753560/1‑94 (MQ=60)

              GTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCG                                                                                >  SRR4302541.8753561/1‑94 (MQ=60)

              GTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCG                                                                                >  SRR4302541.8478678/1‑94 (MQ=60)

               TTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGG                                                                               >  SRR4302541.3117637/1‑94 (MQ=60)

               TTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGG                                                                               >  SRR4302541.8082241/1‑94 (MQ=60)

               TTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGG                                                                               >  SRR4302541.6413989/1‑94 (MQ=60)

                TGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGC                                                                              >  SRR4302541.2506972/1‑94 (MQ=60)

                TGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGC                                                                              <  SRR4302541.3770179/94‑1 (MQ=60)

                   GTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAAT                                                                           <  SRR4302541.1981546/94‑1 (MQ=60)

                   GTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAAT                                                                           <  SRR4302541.6682412/94‑1 (MQ=60)

                    TTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATG                                                                          >  SRR4302541.4997661/1‑94 (MQ=60)

                      TGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCG                                                                        >  SRR4302541.6281774/1‑94 (MQ=60)

                      TGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCG                                                                        >  SRR4302541.6378001/1‑94 (MQ=60)

                      TGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCG                                                                        <  SRR4302541.6399463/94‑1 (MQ=60)

                      TGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCG                                                                        >  SRR4302541.8024098/1‑94 (MQ=60)

                      TGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCG                                                                        <  SRR4302541.2372449/94‑1 (MQ=60)

                      TGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCG                                                                        >  SRR4302541.6191209/1‑94 (MQ=60)

                        ATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTC                                                                      <  SRR4302541.3372749/94‑1 (MQ=60)

                         TAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCT                                                                     <  SRR4302541.8243494/94‑1 (MQ=60)

                         TAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCT                                                                     <  SRR4302541.6981895/94‑1 (MQ=60)

                         GAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCT                                                                     <  SRR4302541.6981896/94‑1 (MQ=60)

                          AGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTG                                                                    >  SRR4302541.7331021/1‑94 (MQ=60)

                           GCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGG                                                                   <  SRR4302541.2514787/94‑1 (MQ=60)

                           GCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGG                                                                   <  SRR4302541.2312650/94‑1 (MQ=60)

                            CCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGC                                                                  >  SRR4302541.372707/1‑94 (MQ=60)

                            CCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGC                                                                  >  SRR4302541.372706/1‑94 (MQ=60)

                             CAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCT                                                                 >  SRR4302541.499752/1‑94 (MQ=60)

                             CAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCT                                                                 <  SRR4302541.8427868/94‑1 (MQ=60)

                              AACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTT                                                                >  SRR4302541.8173589/1‑94 (MQ=60)

                              AACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTT                                                                <  SRR4302541.229346/94‑1 (MQ=60)

                              AACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTT                                                                >  SRR4302541.1085795/1‑94 (MQ=60)

                               ACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTT                                                               <  SRR4302541.1249273/94‑1 (MQ=60)

                                 GCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGC                                                             >  SRR4302541.4307925/1‑94 (MQ=60)

                                 GCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGC                                                             <  SRR4302541.8307820/94‑1 (MQ=60)

                                 GCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGC                                                             <  SRR4302541.3264338/94‑1 (MQ=60)

                                 CCCATCCACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGC                                                             <  SRR4302541.4736704/94‑1 (MQ=60)

                                  CCATCAGCGCGCCGTAGCCCAGCATGGTACTAAACCACGCCAGTGATGTGCGCTCCGTCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCG                                                            <  SRR4302541.1471762/94‑1 (MQ=60)

                                  CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCG                                                            <  SRR4302541.3910663/94‑1 (MQ=60)

                                  CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCG                                                            <  SRR4302541.5660142/94‑1 (MQ=60)

                                  CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCG                                                            <  SRR4302541.6891484/94‑1 (MQ=60)

                                  CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCG                                                            <  SRR4302541.3865570/94‑1 (MQ=60)

                                  CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCG                                                            <  SRR4302541.5528462/94‑1 (MQ=60)

                                  CCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCG                                                            <  SRR4302541.6891485/94‑1 (MQ=60)

                                   CATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGG                                                           >  SRR4302541.3382431/1‑94 (MQ=60)

                                   CATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGG                                                           <  SRR4302541.5637777/94‑1 (MQ=60)

                                   CATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGG                                                           >  SRR4302541.8366322/1‑94 (MQ=60)

                                    ATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCATTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGC                                                          >  SRR4302541.7581216/1‑94 (MQ=60)

                                    ATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGC                                                          >  SRR4302541.7604832/1‑94 (MQ=60)

                                      CAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTA                                                        <  SRR4302541.561621/94‑1 (MQ=60)

                                      CAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTA                                                        <  SRR4302541.6181787/94‑1 (MQ=60)

                                      CAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTA                                                        >  SRR4302541.5743031/1‑94 (MQ=60)

                                      CAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTA                                                        >  SRR4302541.307340/1‑94 (MQ=60)

                                      CAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTGTGCGTCTA                                                        >  SRR4302541.5743032/1‑94 (MQ=60)

                                       AACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTAT                                                       <  SRR4302541.4632527/94‑1 (MQ=60)

                                       AACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTAT                                                       >  SRR4302541.353800/1‑94 (MQ=60)

                                       AACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTAT                                                       >  SRR4302541.7272246/1‑94 (MQ=60)

                                       AACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTAT                                                       <  SRR4302541.2770444/94‑1 (MQ=60)

                                         CGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCC                                                     <  SRR4302541.5666206/94‑1 (MQ=60)

                                         CGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCC                                                     >  SRR4302541.6218293/1‑94 (MQ=60)

                                          GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTTATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCG                                                    <  SRR4302541.6040273/94‑1 (MQ=60)

                                          GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCCGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCG                                                    <  SRR4302541.739925/94‑1 (MQ=60)

                                          GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCG                                                    <  SRR4302541.6040272/94‑1 (MQ=60)

                                          GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCG                                                    <  SRR4302541.1302569/94‑1 (MQ=60)

                                          GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCG                                                    >  SRR4302541.7440274/1‑94 (MQ=60)

                                          GCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCG                                                    <  SRR4302541.7502303/94‑1 (MQ=60)

                                           CGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGG                                                   <  SRR4302541.3263973/94‑1 (MQ=60)

                                            GCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGC                                                  >  SRR4302541.404679/1‑94 (MQ=60)

                                            GCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGC                                                  <  SRR4302541.6348803/94‑1 (MQ=60)

                                             CCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCA                                                 <  SRR4302541.1048944/94‑1 (MQ=60)

                                              CGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCAT                                                >  SRR4302541.4025913/1‑94 (MQ=60)

                                              CGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCAT                                                >  SRR4302541.4240941/1‑94 (MQ=60)

                                              CGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCAT                                                >  SRR4302541.8056995/1‑94 (MQ=60)

                                              CGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCAT                                                <  SRR4302541.2097092/94‑1 (MQ=60)

                                               GTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATA                                               >  SRR4302541.1048185/1‑94 (MQ=60)

                                               GTAGCCCAGCATGGTACGAAACCAAGCCAGAGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGAGGCTATCCGccatc                                               >  SRR4302541.2437045/1‑89 (MQ=60)

                                                TAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATAC                                              >  SRR4302541.3647984/1‑94 (MQ=60)

                                                TAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATAC                                              >  SRR4302541.5951392/1‑94 (MQ=60)

                                                TAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATAC                                              <  SRR4302541.592264/94‑1 (MQ=60)

                                                 AGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACA                                             <  SRR4302541.1981390/94‑1 (MQ=60)

                                                 AGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACA                                             >  SRR4302541.145409/1‑94 (MQ=60)

                                                   CCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAAC                                           >  SRR4302541.2029567/1‑94 (MQ=60)

                                                    CCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACA                                          >  SRR4302541.3724191/1‑94 (MQ=60)

                                                    CCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACA                                          >  SRR4302541.2866935/1‑94 (MQ=60)

                                                    CCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACA                                          >  SRR4302541.1363281/1‑94 (MQ=60)

                                                     CAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACAC                                         <  SRR4302541.7810264/94‑1 (MQ=60)

                                                      AGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACC                                        <  SRR4302541.3858691/94‑1 (MQ=60)

                                                       GCATGGTACGAAACCCCGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCA                                       <  SRR4302541.4583485/94‑1 (MQ=60)

                                                       GCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACANCACCA                                       <  SRR4302541.6335714/94‑1 (MQ=60)

                                                       GCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCA                                       <  SRR4302541.1730609/94‑1 (MQ=60)

                                                        CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                      <  SRR4302541.4287643/94‑1 (MQ=60)

                                                        CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                      <  SRR4302541.8302819/94‑1 (MQ=60)

                                                        CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                      >  SRR4302541.965246/1‑94 (MQ=60)

                                                        CATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAG                                      >  SRR4302541.4132797/1‑94 (MQ=60)

                                                         ATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGT                                     <  SRR4302541.3857468/94‑1 (MQ=60)

                                                          TGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTC                                    <  SRR4302541.7238497/94‑1 (MQ=60)

                                                          GGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTC                                    >  SRR4302541.7763621/1‑94 (MQ=60)

                                                           GGTACGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCC                                   >  SRR4302541.1715398/1‑94 (MQ=60)

                                                               CGAAACCACGCCAGTGATGTGCGCTCCGTCCGCAGTCCTGGGTCTGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATA                               <  SRR4302541.7755478/94‑1 (MQ=60)

                                                               CGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATA                               >  SRR4302541.4408496/1‑94 (MQ=60)

                                                               CGAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATA                               >  SRR4302541.4408497/1‑94 (MQ=60)

                                                                GAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAC                              >  SRR4302541.2879235/1‑94 (MQ=60)

                                                                GAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAA                              <  SRR4302541.6544099/94‑1 (MQ=60)

                                                                GAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAA                              <  SRR4302541.3408828/94‑1 (MQ=60)

                                                                GAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAA                              >  SRR4302541.7639447/1‑94 (MQ=60)

                                                                GAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAA                              >  SRR4302541.1115433/1‑94 (MQ=60)

                                                                GAAACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAA                              <  SRR4302541.1137388/94‑1 (MQ=60)

                                                                 AAACCACGCCAGTGATGTGCGCTCCGGCCGCAGCCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATACGGCATACAACACCAGTCCCATAAC                             >  SRR4302541.6375501/1‑94 (MQ=60)

                                                                  AACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                            >  SRR4302541.3007220/1‑94 (MQ=60)

                                                                  AACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                            >  SRR4302541.2770065/1‑94 (MQ=60)

                                                                  AACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                            <  SRR4302541.458833/94‑1 (MQ=60)

                                                                  AACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                            <  SRR4302541.5825582/94‑1 (MQ=60)

                                                                  AACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACG                            <  SRR4302541.8143374/94‑1 (MQ=60)

                                                                   ACCACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTTGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGA                           >  SRR4302541.8543287/1‑94 (MQ=60)

                                                                     CACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATC                         <  SRR4302541.2922679/94‑1 (MQ=60)

                                                                     CACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATC                         >  SRR4302541.7300623/1‑94 (MQ=60)

                                                                     CACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATC                         >  SRR4302541.122796/1‑94 (MQ=60)

                                                                      caGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCA                        <  SRR4302541.3040059/92‑1 (MQ=60)

                                                                      ACGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCA                        >  SRR4302541.967782/1‑94 (MQ=60)

                                                                       CGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCAC                       <  SRR4302541.5157941/94‑1 (MQ=60)

                                                                       CGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCAC                       <  SRR4302541.2532041/94‑1 (MQ=60)

                                                                       CGCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCAC                       >  SRR4302541.3841231/1‑94 (MQ=60)

                                                                        GGCAGTGATGTGCCCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACC                      <  SRR4302541.1933644/94‑1 (MQ=60)

                                                                        GCCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACC                      <  SRR4302541.1970358/94‑1 (MQ=60)

                                                                         CCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCG                     <  SRR4302541.8379020/94‑1 (MQ=60)

                                                                         CCAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCC                     >  SRR4302541.4553376/1‑94 (MQ=60)

                                                                          CAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGC                    >  SRR4302541.915205/1‑94 (MQ=60)

                                                                          CAGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGC                    >  SRR4302541.4554476/1‑94 (MQ=60)

                                                                           AGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATTCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCC                   <  SRR4302541.6697327/94‑1 (MQ=60)

                                                                           AGTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCC                   <  SRR4302541.2085369/94‑1 (MQ=60)

                                                                            GTGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCA                  <  SRR4302541.2442253/94‑1 (MQ=60)

                                                                             TGATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGCTCACCGCCAC                 >  SRR4302541.4266617/1‑94 (MQ=60)

                                                                              GATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACG                <  SRR4302541.7853459/94‑1 (MQ=60)

                                                                              GATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACG                <  SRR4302541.5318061/94‑1 (MQ=60)

                                                                               ATGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGA               <  SRR4302541.8020521/94‑1 (MQ=60)

                                                                                TGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGAC              <  SRR4302541.3854382/94‑1 (MQ=60)

                                                                                TGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGAC              >  SRR4302541.211883/1‑94 (MQ=60)

                                                                                TGTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGAC              <  SRR4302541.8364267/94‑1 (MQ=60)

                                                                                 GTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACC             >  SRR4302541.6754639/1‑94 (MQ=60)

                                                                                 GTGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGACACGACA             >  SRR4302541.3111487/1‑94 (MQ=60)

                                                                                  TGCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCA            <  SRR4302541.1319404/94‑1 (MQ=60)

                                                                                   GCGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCAT           <  SRR4302541.930784/94‑1 (MQ=60)

                                                                                    CGCTTCGGCCGCAGTCCTGGGTCGGCAATGCCTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATC          <  SRR4302541.993993/94‑1 (MQ=60)

                                                                                    CGCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATC          <  SRR4302541.2587576/94‑1 (MQ=60)

                                                                                     GCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCA         >  SRR4302541.7145827/1‑94 (MQ=60)

                                                                                     GCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCA         >  SRR4302541.3227882/1‑94 (MQ=60)

                                                                                     GCTCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCA         <  SRR4302541.8557193/94‑1 (MQ=60)

                                                                                       TCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAAT       >  SRR4302541.6420870/1‑94 (MQ=60)

                                                                                       TCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAAT       <  SRR4302541.480241/94‑1 (MQ=60)

                                                                                       TCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAAT       <  SRR4302541.4053651/94‑1 (MQ=60)

                                                                                       TCCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAAT       >  SRR4302541.3456959/1‑94 (MQ=60)

                                                                                        CCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATA      <  SRR4302541.6682678/94‑1 (MQ=60)

                                                                                        CCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATA      <  SRR4302541.6682679/94‑1 (MQ=60)

                                                                                        CCGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATA      <  SRR4302541.3997715/94‑1 (MQ=60)

                                                                                         CGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATAT     <  SRR4302541.5626450/94‑1 (MQ=60)

                                                                                         CGGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATAT     <  SRR4302541.2678594/94‑1 (MQ=60)

                                                                                          GGCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGACCCATAACGAGCACCGCCACGACCATCAATATT    >  SRR4302541.7883188/1‑94 (MQ=60)

                                                                                           GCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTA   <  SRR4302541.1218057/94‑1 (MQ=60)

                                                                                           GCCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTA   <  SRR4302541.1218056/94‑1 (MQ=60)

                                                                                            CCGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAA  >  SRR4302541.8327890/1‑94 (MQ=60)

CCCGCCTGGTGCCAGTTGTGTTTGATAGCCAACGCCATCAACGCGCCGTAGCCCAGCATGGTACGAAACCACGCCAGTGATGTGCGCTCCGGCTGCAGTCCTGGGTCGGCAATGCGTCTGGCTTTGCGGCTATCCGGCATACAACACCAGTCCCATAACGATCACCGCCACGACCATCAATATTAA  >  NC_000913/3853458‑3853643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`