Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,870,765 +G coding (476/1764 nt) dgoA ← 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,870,7641.G100.0% 1232.0 / NA 355A159A (GCA→GCC) dgoA2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (161/194);  total (161/194)

Only 100 of 390 total aligned reads displayed.

GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG  >  NC_000913/3870672‑3870851
                                                                                             |                                                                                       
gcgGTGCGCTATAGGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCt                                                                                          <  2:2514113/93‑1 (MQ=255)
 cgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑g                                                                                        <  1:1721102/93‑1 (MQ=255)
  ggTGCGCTCTCCGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCTCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑gg                                                                                       <  2:7120835/93‑2 (MQ=255)
   gTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑ggc                                                                                      >  1:5677592/1‑91 (MQ=255)
     gcgcTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑ggcgt                                                                                    <  1:1001302/93‑5 (MQ=255)
       gcTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCa                                                                                   >  2:8371646/1‑93 (MQ=255)
        ctctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAc                                                                                  <  1:3331628/93‑1 (MQ=255)
        ctctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAc                                                                                  <  1:6479543/93‑1 (MQ=255)
        ctctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAc                                                                                  >  1:4142550/1‑93 (MQ=255)
          ctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgc                                                                                >  1:7650033/1‑93 (MQ=255)
          ctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgc                                                                                <  2:5491697/93‑1 (MQ=255)
           tACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgcc                                                                               >  1:703131/1‑93 (MQ=255)
           tACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgcc                                                                               >  2:3229053/1‑93 (MQ=255)
              ggATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACgccgcc                                                                            >  2:4516517/1‑93 (MQ=255)
               gATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCa                                                                           >  1:1242323/1‑93 (MQ=255)
               gATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCa                                                                           <  1:8285117/93‑1 (MQ=255)
                aTTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCaa                                                                          <  2:493923/93‑1 (MQ=255)
                aTTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCaa                                                                          <  1:7772245/93‑1 (MQ=255)
                   gCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACgg                                                                       <  1:3181787/93‑1 (MQ=255)
                   gCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACgg                                                                       >  1:4083563/1‑93 (MQ=255)
                   gCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACgg                                                                       >  1:4413091/1‑93 (MQ=255)
                    cccGGCGCGATAGAGTTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCCCCCACAGc                                                                      >  1:5371330/1‑93 (MQ=255)
                     ccGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCa                                                                     >  2:1306878/1‑93 (MQ=255)
                     ccGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCa                                                                     >  2:3560229/1‑93 (MQ=255)
                       ggCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCaaa                                                                   <  2:5263608/93‑1 (MQ=255)
                          gcgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAc                                                                <  1:4513853/93‑1 (MQ=255)
                          gcgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAc                                                                <  1:3429373/93‑1 (MQ=255)
                             aTAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc                                                             <  2:2188127/93‑1 (MQ=255)
                             aTAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc                                                             <  2:2010343/93‑1 (MQ=255)
                             aTAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc                                                             >  2:1892441/1‑93 (MQ=255)
                             aTAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc                                                             <  2:392773/93‑1 (MQ=255)
                             aTAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc                                                             <  1:5813732/93‑1 (MQ=255)
                              tAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCg                                                            >  1:2566529/1‑93 (MQ=255)
                               agagATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGa                                                           <  1:5561948/93‑1 (MQ=255)
                                gagaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAt                                                          <  1:5084384/93‑1 (MQ=255)
                                 agaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg                                                         >  1:6761767/1‑93 (MQ=255)
                                  gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt                                                        >  2:5050737/1‑93 (MQ=255)
                                  gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt                                                        <  1:5308991/93‑1 (MQ=255)
                                  gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt                                                        >  2:3093708/1‑93 (MQ=255)
                                   aTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTc                                                       <  1:5953355/93‑1 (MQ=255)
                                   aTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTc                                                       >  2:7230580/1‑93 (MQ=255)
                                     cGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCg                                                     <  1:1119560/93‑1 (MQ=255)
                                       cTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGAt                                                   >  2:6120020/1‑93 (MQ=255)
                                        tGCCTAACCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATg                                                  <  2:2866245/93‑1 (MQ=255)
                                         gCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATgg                                                 >  2:3011464/1‑93 (MQ=255)
                                          ccTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGc                                                <  1:8173901/93‑1 (MQ=255)
                                          ccTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGc                                                <  1:4570762/93‑1 (MQ=255)
                                            tAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCaa                                              <  1:788996/93‑1 (MQ=255)
                                              aGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATa                                            >  2:7991312/1‑93 (MQ=255)
                                              aGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATa                                            >  2:3769833/1‑93 (MQ=255)
                                               gcccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAc                                           <  1:6316950/93‑1 (MQ=255)
                                                cccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAcc                                          <  2:2687995/93‑1 (MQ=255)
                                                cccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAcc                                          >  2:4713357/1‑93 (MQ=255)
                                                 ccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCg                                         <  1:2023552/93‑1 (MQ=255)
                                                  cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc                                        >  2:303317/1‑93 (MQ=255)
                                                  cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc                                        >  1:7503016/1‑93 (MQ=255)
                                                  cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc                                        >  1:6636211/1‑93 (MQ=255)
                                                   gcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCt                                       >  1:1862243/1‑93 (MQ=255)
                                                    ccccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCtt                                      <  1:2495755/93‑1 (MQ=255)
                                                    ccccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCtt                                      >  2:3357005/1‑93 (MQ=255)
                                                    ccccGGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCTCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCtt                                      <  2:7878882/93‑1 (MQ=255)
                                                     cccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCttt                                     >  2:4329305/1‑93 (MQ=255)
                                                      ccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCtttt                                    <  2:1779370/93‑1 (MQ=255)
                                                       cTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTa                                   <  1:6141365/93‑1 (MQ=255)
                                                        tGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTaa                                  >  1:1015575/1‑93 (MQ=255)
                                                        tGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTaa                                  >  2:5978536/1‑93 (MQ=255)
                                                        tGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTaa                                  <  2:4297004/93‑1 (MQ=255)
                                                        tGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTaa                                  >  2:729880/1‑93 (MQ=255)
                                                         gCACAACCTGCTTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAc                                 <  2:1132839/93‑1 (MQ=255)
                                                         gCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAc                                 <  1:275033/93‑1 (MQ=255)
                                                          cacaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACg                                >  2:8524931/1‑93 (MQ=255)
                                                           acaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGc                               <  1:719830/93‑1 (MQ=255)
                                                           acaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGc                               >  2:7428629/1‑93 (MQ=255)
                                                            caACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCt                              <  2:8711107/93‑1 (MQ=255)
                                                            caACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCt                              <  2:8330320/93‑1 (MQ=255)
                                                              aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt                            <  2:7017980/93‑1 (MQ=255)
                                                                cTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGa                          <  2:8289992/93‑1 (MQ=255)
                                                                 tGCGTCTCTCCACTGCGCCAGGATTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATTGCAATACCGCTTTTCACGCTTTGAt                         >  2:8807505/1‑93 (MQ=255)
                                                                 tGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAt                         <  2:158268/93‑1 (MQ=255)
                                                                 tGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAt                         >  1:1071560/1‑93 (MQ=255)
                                                                  gCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATg                        <  1:1373840/93‑1 (MQ=255)
                                                                  gCGTCTATCCACTGCGCCAGGTTTTCTGGCGGCACACCGCCAACGGCAAAGACTGCGAGGTCCGATGGCAATACCGCTTTTAATGCGTTGATg                        >  2:1640520/1‑93 (MQ=255)
                                                                     tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt                     <  1:2923908/93‑1 (MQ=255)
                                                                     tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt                     <  1:3728377/93‑1 (MQ=255)
                                                                     tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt                     <  2:6891327/93‑1 (MQ=255)
                                                                        aTCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGc                  <  2:416463/93‑1 (MQ=255)
                                                                         tCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCg                 >  2:7564289/1‑93 (MQ=255)
                                                                           cACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGa               <  1:384463/93‑1 (MQ=255)
                                                                             cTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAcc             >  2:5630374/1‑93 (MQ=255)
                                                                              tGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCa            >  1:886443/1‑93 (MQ=255)
                                                                                 gcCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCaaaa         >  2:2092666/1‑93 (MQ=255)
                                                                                 gcCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCaaaa         >  2:6445731/1‑93 (MQ=255)
                                                                                  ccAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAg        <  2:519570/93‑1 (MQ=255)
                                                                                   cAGGTTTTCTGGTGTCACGCCGCCAACGGCCAAGACTGCGATGTCCGATGGCAATACCGCTTTGAACGCTTTGATGTATTGCGGACCAAAAGc       <  1:3609339/93‑1 (MQ=255)
                                                                                   cAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGc       <  2:4094278/93‑1 (MQ=255)
                                                                                    aGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGcc      >  2:6705858/1‑93 (MQ=255)
                                                                                      gTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGa    >  1:2280680/1‑93 (MQ=255)
                                                                                       ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt   >  2:1195410/1‑93 (MQ=255)
                                                                                       ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt   <  2:2638234/93‑1 (MQ=255)
                                                                                        tttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATg  >  2:5710175/1‑93 (MQ=255)
                                                                                             |                                                                                       
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG  >  NC_000913/3870672‑3870851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAA  >  NC_000913/3870672‑3870858
                                                                                              |                                                                                             
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G                                                                                               <  SRR4302541.4122835/94‑1 (MQ=60)
 CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GG                                                                                              <  SRR4302541.2624040/94‑1 (MQ=60)
 CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GG                                                                                              <  SRR4302541.1737927/94‑1 (MQ=60)
 CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GG                                                                                              >  SRR4302541.1768504/1‑94 (MQ=60)
 CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GG                                                                                              >  SRR4302541.6812954/1‑94 (MQ=60)
 CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GG                                                                                              >  SRR4302541.2965776/1‑94 (MQ=60)
  GGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑Ggc                                                                                             <  SRR4302541.2484551/94‑3 (MQ=60)
  GGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑Ggc                                                                                             >  SRR4302541.5735523/1‑92 (MQ=60)
   GTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑Ggcg                                                                                            <  SRR4302541.4214666/94‑4 (MQ=60)
   GTGCGCTCTACGGAGTCCCCGGCGCGATAGAGATCGCGCCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑Ggcg                                                                                            <  SRR4302541.4214665/94‑4 (MQ=60)
    TGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGT                                                                                            <  SRR4302541.3715502/94‑1 (MQ=60)
     GCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTC                                                                                           <  SRR4302541.1010608/94‑1 (MQ=60)
      CGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCA                                                                                          >  SRR4302541.8349315/1‑94 (MQ=60)
       GCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCGGGTTTTCTGGCGTCAC                                                                                         >  SRR4302541.911436/1‑94 (MQ=60)
       GCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAC                                                                                         <  SRR4302541.2104617/94‑1 (MQ=60)
       GCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAC                                                                                         >  SRR4302541.4183491/1‑94 (MQ=60)
       GCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAC                                                                                         <  SRR4302541.5767319/94‑1 (MQ=60)
        CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG                                                                                        <  SRR4302541.7753161/94‑1 (MQ=60)
        CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG                                                                                        >  SRR4302541.5469011/1‑94 (MQ=60)
        CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG                                                                                        >  SRR4302541.2930070/1‑94 (MQ=60)
        CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG                                                                                        <  SRR4302541.3364998/94‑1 (MQ=60)
        CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG                                                                                        >  SRR4302541.1803077/1‑94 (MQ=60)
        CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG                                                                                        <  SRR4302541.6545577/94‑1 (MQ=60)
        CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACG                                                                                        >  SRR4302541.6097236/1‑94 (MQ=60)
         TCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGC                                                                                       >  SRR4302541.7731539/1‑94 (MQ=60)
         TCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGC                                                                                       >  SRR4302541.2877675/1‑94 (MQ=60)
          CTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCC                                                                                      >  SRR4302541.2541712/1‑94 (MQ=60)
          CTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCC                                                                                      >  SRR4302541.709745/1‑94 (MQ=60)
           TACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCG                                                                                     <  SRR4302541.1268009/94‑1 (MQ=60)
           TACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCG                                                                                     >  SRR4302541.6338434/1‑94 (MQ=60)
            ACGGATTGCCGGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGC                                                                                    <  SRR4302541.252824/94‑1 (MQ=60)
            ACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGC                                                                                    <  SRR4302541.2753757/94‑1 (MQ=60)
            ACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGC                                                                                    <  SRR4302541.8271769/94‑1 (MQ=60)
             CGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCC                                                                                   >  SRR4302541.621792/1‑94 (MQ=60)
              GGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCA                                                                                  <  SRR4302541.5501228/94‑1 (MQ=60)
              GGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCA                                                                                  >  SRR4302541.1254609/1‑94 (MQ=60)
               GATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAA                                                                                 <  SRR4302541.8375228/94‑1 (MQ=60)
                ATTGCCGGGCGCGTAAGAGATCGTAGCCAAGGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAC                                                                                <  SRR4302541.7876069/94‑1 (MQ=60)
                ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAC                                                                                <  SRR4302541.2239199/94‑1 (MQ=60)
                ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAC                                                                                >  SRR4302541.8197156/1‑94 (MQ=60)
                ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAC                                                                                <  SRR4302541.7854924/94‑1 (MQ=60)
                 TTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACG                                                                               <  SRR4302541.3862784/94‑1 (MQ=60)
                 TTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACG                                                                               <  SRR4302541.3879612/94‑1 (MQ=60)
                  TGCCCGGCGCGATAGAGATCGCTGCCTACGCCCGCCACTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGG                                                                              <  SRR4302541.2389094/94‑1 (MQ=60)
                  TGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGG                                                                              >  SRR4302541.4457314/1‑94 (MQ=60)
                  TGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGG                                                                              >  SRR4302541.4123870/1‑94 (MQ=60)
                   GCCCGGCGCGATAGAGTTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCccccacagc                                                                             >  SRR4302541.5426474/1‑85 (MQ=60)
                   GCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGC                                                                             <  SRR4302541.3213926/94‑1 (MQ=60)
                   GCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGC                                                                             >  SRR4302541.1620283/1‑94 (MQ=60)
                   GCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTACCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGC                                                                             <  SRR4302541.5410151/94‑1 (MQ=60)
                     CCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAA                                                                           >  SRR4302541.6515765/1‑94 (MQ=60)
                      CGGCGCAATAGAGATCGCTCCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAA                                                                          <  SRR4302541.6247748/94‑1 (MQ=60)
                       GGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAG                                                                         <  SRR4302541.7464049/94‑1 (MQ=60)
                       GGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAG                                                                         <  SRR4302541.4607171/94‑1 (MQ=60)
                         CGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAC                                                                       <  SRR4302541.812291/94‑1 (MQ=60)
                         CGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAC                                                                       >  SRR4302541.1040294/1‑94 (MQ=60)
                          GCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACT                                                                      <  SRR4302541.3463627/94‑1 (MQ=60)
                          GCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACT                                                                      <  SRR4302541.4559400/94‑1 (MQ=60)
                          GCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACT                                                                      <  SRR4302541.4559399/94‑1 (MQ=60)
                          GCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACT                                                                      <  SRR4302541.7379665/94‑1 (MQ=60)
                          GAGATAGAGACCGCTCCATAAGCCCGCCCCTGCCCAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCAGCCAACGGCAAAGACT                                                                      <  SRR4302541.3463626/94‑1 (MQ=60)
                           CGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTG                                                                     <  SRR4302541.6902949/94‑1 (MQ=60)
                           CGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTG                                                                     <  SRR4302541.5128102/94‑1 (MQ=60)
                            GATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGC                                                                    <  SRR4302541.5306736/94‑1 (MQ=60)
                             ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG                                                                   <  SRR4302541.3718996/94‑1 (MQ=60)
                             ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG                                                                   <  SRR4302541.6976139/94‑1 (MQ=60)
                             ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG                                                                   <  SRR4302541.5189277/94‑1 (MQ=60)
                             ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG                                                                   <  SRR4302541.6976140/94‑1 (MQ=60)
                             ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG                                                                   >  SRR4302541.2592254/1‑94 (MQ=60)
                             ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG                                                                   <  SRR4302541.4668732/94‑1 (MQ=60)
                             ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG                                                                   <  SRR4302541.5872808/94‑1 (MQ=60)
                             ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCG                                                                   <  SRR4302541.5768939/94‑1 (MQ=60)
                              TAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGA                                                                  >  SRR4302541.3166312/1‑94 (MQ=60)
                               AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAT                                                                 <  SRR4302541.5618887/94‑1 (MQ=60)
                               AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAT                                                                 >  SRR4302541.1261647/1‑94 (MQ=60)
                                GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATG                                                                >  SRR4302541.1470585/1‑94 (MQ=60)
                                GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATG                                                                <  SRR4302541.5136617/94‑1 (MQ=60)
                                GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATG                                                                >  SRR4302541.6834073/1‑94 (MQ=60)
                                GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATG                                                                <  SRR4302541.5529294/94‑1 (MQ=60)
                                 AGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGT                                                               >  SRR4302541.6095847/1‑94 (MQ=60)
                                  GATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTC                                                              >  SRR4302541.5417095/1‑94 (MQ=60)
                                  GATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTC                                                              <  SRR4302541.5363641/94‑1 (MQ=60)
                                   ATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCC                                                             <  SRR4302541.6014030/94‑1 (MQ=60)
                                   ATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCC                                                             <  SRR4302541.6014031/94‑1 (MQ=60)
                                   ATCGCGGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCC                                                             <  SRR4302541.4129256/94‑1 (MQ=60)
                                    TCGCTGCCTAGGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCG                                                            <  SRR4302541.681535/94‑1 (MQ=60)
                                     CGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGA                                                           <  SRR4302541.1130091/94‑1 (MQ=60)
                                     CGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGA                                                           >  SRR4302541.4409581/1‑94 (MQ=60)
                                       CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG                                                         <  SRR4302541.7719065/94‑1 (MQ=60)
                                       CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG                                                         <  SRR4302541.413951/94‑1 (MQ=60)
                                       CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG                                                         <  SRR4302541.1105115/94‑1 (MQ=60)
                                       CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG                                                         <  SRR4302541.1036673/94‑1 (MQ=60)
                                       CGGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG                                                         <  SRR4302541.7745592/94‑1 (MQ=60)
                                        TGCTTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCGAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGG                                                        <  SRR4302541.4118874/94‑1 (MQ=60)
                                        TGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGG                                                        <  SRR4302541.963042/94‑1 (MQ=60)
                                          CCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCA                                                      <  SRR4302541.4617054/94‑1 (MQ=60)
                                          CCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCA                                                      <  SRR4302541.8263151/94‑1 (MQ=60)
                                           CTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAA                                                     >  SRR4302541.447473/1‑94 (MQ=60)
                                            TAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT                                                    <  SRR4302541.3461335/94‑1 (MQ=60)
                                            TAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT                                                    <  SRR4302541.796303/94‑1 (MQ=60)
                                              AGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAC                                                  <  SRR4302541.5698577/94‑1 (MQ=60)
                                               GCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC                                                 <  SRR4302541.6381535/94‑1 (MQ=60)
                                               GCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC                                                 <  SRR4302541.4857514/94‑1 (MQ=60)
                                                CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCG                                                <  SRR4302541.642600/94‑1 (MQ=60)
                                                CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCG                                                <  SRR4302541.1871007/94‑1 (MQ=60)
                                                CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCG                                                <  SRR4302541.3064033/94‑1 (MQ=60)
                                                 CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC                                               >  SRR4302541.6704250/1‑94 (MQ=60)
                                                 CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC                                               >  SRR4302541.7583212/1‑94 (MQ=60)
                                                 CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC                                               >  SRR4302541.8694801/1‑94 (MQ=60)
                                                 CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC                                               <  SRR4302541.2043119/94‑1 (MQ=60)
                                                 CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC                                               >  SRR4302541.7986382/1‑94 (MQ=60)
                                                  CGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCT                                              >  SRR4302541.1880204/1‑94 (MQ=60)
                                                    CCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTT                                            <  SRR4302541.2520935/94‑1 (MQ=60)
                                                    CCCCTGCACAACCTGCGTCTAGCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCACCGGCAAAGCCTGCGATGTCCGATGGCAATACCGCTTT                                            <  SRR4302541.5848797/94‑1 (MQ=60)
                                                     CCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTT                                           >  SRR4302541.8513215/1‑94 (MQ=60)
                                                     CCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTT                                           >  SRR4302541.3380721/1‑94 (MQ=60)
                                                      CCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTA                                          >  SRR4302541.7208622/1‑94 (MQ=60)
                                                      CCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTA                                          >  SRR4302541.1704083/1‑94 (MQ=60)
                                                       CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAA                                         >  SRR4302541.1024967/1‑94 (MQ=60)
                                                       CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAA                                         <  SRR4302541.795845/94‑1 (MQ=60)
                                                       CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAA                                         <  SRR4302541.6204089/94‑1 (MQ=60)
                                                       CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAA                                         >  SRR4302541.5666784/1‑94 (MQ=60)
                                                        TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC                                        >  SRR4302541.1022764/1‑94 (MQ=60)
                                                         GCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACG                                       <  SRR4302541.277344/94‑1 (MQ=60)
                                                           ACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCT                                     >  SRR4302541.5722200/1‑94 (MQ=60)
                                                           ACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCT                                     <  SRR4302541.726634/94‑1 (MQ=60)
                                                            CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT                                    >  SRR4302541.7723463/1‑94 (MQ=60)
                                                               CCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGA                                 >  SRR4302541.6554977/1‑94 (MQ=60)
                                                               CCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGA                                 <  SRR4302541.3695800/94‑1 (MQ=60)
                                                               CCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGA                                 <  SRR4302541.4541612/94‑1 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAATACTGCGATGTCCGATGGCAATACAGCTTTTAACGCTTTGAT                                >  SRR4302541.1081535/1‑94 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCCATACCGCTTTTAACGCTTTGAT                                >  SRR4302541.1081534/1‑94 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT                                >  SRR4302541.7685471/1‑94 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT                                >  SRR4302541.2107596/1‑94 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT                                <  SRR4302541.673082/94‑1 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT                                >  SRR4302541.1081533/1‑94 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT                                >  SRR4302541.1045827/1‑94 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT                                >  SRR4302541.411376/1‑94 (MQ=60)
                                                                CTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT                                <  SRR4302541.646941/94‑1 (MQ=60)
                                                                 TGCGGCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGGCTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATG                               <  SRR4302541.2864782/94‑1 (MQ=60)
                                                                  GCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT                              <  SRR4302541.1387348/94‑1 (MQ=60)
                                                                  GCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT                              <  SRR4302541.5416886/94‑1 (MQ=60)
                                                                   CGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA                             >  SRR4302541.1013683/1‑94 (MQ=60)
                                                                   CGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA                             >  SRR4302541.3516702/1‑94 (MQ=60)
                                                                   CGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA                             >  SRR4302541.2860690/1‑94 (MQ=60)
                                                                   CGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCCATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTT                             >  SRR4302541.3516701/1‑94 (MQ=60)
                                                                     TCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATT                           <  SRR4302541.3765936/94‑1 (MQ=60)
                                                                     TCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATT                           <  SRR4302541.2953312/94‑1 (MQ=60)
                                                                      CTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG                          <  SRR4302541.6586007/94‑1 (MQ=60)
                                                                       TATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGC                         >  SRR4302541.1889080/1‑94 (MQ=60)
                                                                       TATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGC                         >  SRR4302541.3794803/1‑94 (MQ=60)
                                                                        ATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCG                        >  SRR4302541.7361802/1‑94 (MQ=60)
                                                                         TCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGG                       <  SRR4302541.3258665/94‑1 (MQ=60)
                                                                           CACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC                     <  SRR4302541.388011/94‑1 (MQ=60)
                                                                           CACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC                     <  SRR4302541.3291647/94‑1 (MQ=60)
                                                                           CACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC                     <  SRR4302541.5304774/94‑1 (MQ=60)
                                                                             CTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCA                   >  SRR4302541.894563/1‑94 (MQ=60)
                                                                             CTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCA                   >  SRR4302541.894564/1‑94 (MQ=60)
                                                                             CTGCGCCAGGTTTTCTGGCGGCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCA                   <  SRR4302541.6560206/94‑1 (MQ=60)
                                                                              TGCGCCAGGTTTGCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAA                  <  SRR4302541.194477/94‑1 (MQ=60)
                                                                                CGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAA                >  SRR4302541.8713566/1‑94 (MQ=60)
                                                                                CGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAA                >  SRR4302541.6074796/1‑94 (MQ=60)
                                                                                CGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAA                >  SRR4302541.7187639/1‑94 (MQ=60)
                                                                                 gcgcggtgtgctgGCGTCCCGCCGCCAACGGCAAGGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGTTGTATTGCGGACCAAAAG               <  SRR4302541.2308265/81‑1 (MQ=60)
                                                                                 GCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGTTGTATTGCGGACCAAAAG               <  SRR4302541.2308266/94‑1 (MQ=60)
                                                                                 GCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG               >  SRR4302541.8304908/1‑94 (MQ=60)
                                                                                 GCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG               >  SRR4302541.5880811/1‑94 (MQ=60)
                                                                                 GCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG               <  SRR4302541.1360708/94‑1 (MQ=60)
                                                                                  CCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGC              >  SRR4302541.3598378/1‑94 (MQ=60)
                                                                                   CAGGTTTTCTGGTGTCACGCCGCCAACGGCCAAGACTGCGATGTCCGATGGCAATACCGCTTTGAACGCTTTGATGTATTGCGGACCAAAAGCC             <  SRR4302541.3645936/94‑1 (MQ=60)
                                                                                    AGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG            >  SRR4302541.4564017/1‑94 (MQ=60)
                                                                                    AGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG            >  SRR4302541.3304379/1‑94 (MQ=60)
                                                                                     GGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGA           >  SRR4302541.2302729/1‑94 (MQ=60)
                                                                                       TTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG         <  SRR4302541.1248219/94‑1 (MQ=60)
                                                                                       TTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG         <  SRR4302541.2726718/94‑1 (MQ=60)
                                                                                       TTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG         <  SRR4302541.2038122/94‑1 (MQ=60)
                                                                                       TTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG         >  SRR4302541.7255256/1‑94 (MQ=60)
                                                                                       TTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG         <  SRR4302541.1248218/94‑1 (MQ=60)
                                                                                       TTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG         <  SRR4302541.1251779/94‑1 (MQ=60)
                                                                                        TTTCTGGCGGCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGA        <  SRR4302541.3383237/94‑1 (MQ=60)
                                                                                         tcctgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGAC       <  SRR4302541.1978453/89‑1 (MQ=60)
                                                                                         TTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATATATTGCGGACCAAAAGCCGATGAC       <  SRR4302541.5786164/94‑1 (MQ=60)
                                                                                          TCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACG      <  SRR4302541.1207203/94‑1 (MQ=60)
                                                                                           ctgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG     <  SRR4302541.3739346/91‑1 (MQ=60)
                                                                                           ctgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG     >  SRR4302541.7061218/4‑94 (MQ=60)
                                                                                           ctgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG     <  SRR4302541.3427314/91‑1 (MQ=60)
                                                                                            tgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA    <  SRR4302541.5402099/92‑1 (MQ=60)
                                                                                            tgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA    >  SRR4302541.7289995/3‑94 (MQ=60)
                                                                                            tgGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA    >  SRR4302541.6243264/3‑94 (MQ=60)
                                                                                            tgGCGTCACGCCGACAACGGCAAAGACTGCGATGTCCGATGGCACTACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA    <  SRR4302541.4424284/92‑1 (MQ=60)
                                                                                              GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAA  >  SRR4302541.3131059/1‑94 (MQ=60)
                                                                                              |                                                                                             
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAAA  >  NC_000913/3870672‑3870858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑