Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,870,765 |
+G |
coding (476/1764 nt) |
dgoA ← |
2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,870,764 | 1 | . | G | 100.0%
| 952.8
/ NA
| 273 | A159A (GCA→GCC) | dgoA | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (132/141); total (132/141) |
Only 100 of 294 total aligned reads displayed.
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG > NC_000913/3870672‑3870851
|
cgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑g > 2:2427708/1‑93 (MQ=255)
ggTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑gg > 1:6258127/1‑92 (MQ=255)
gTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑ggc > 2:3218335/1‑91 (MQ=255)
gTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑ggc > 2:647330/1‑91 (MQ=255)
gcgcTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑ggcgt < 2:6080221/93‑5 (MQ=255)
ctctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAc > 2:344805/1‑93 (MQ=255)
ctctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAc < 2:2536915/93‑1 (MQ=255)
ctctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAc < 1:3125998/93‑1 (MQ=255)
tctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcg > 2:1530689/1‑93 (MQ=255)
ctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgc > 1:1359622/1‑93 (MQ=255)
ctACGGATTCCCCGGCGCGATAGAGATCGCTGCCTAGCCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgc < 2:5540975/93‑1 (MQ=255)
cGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgccgc > 2:1169671/1‑93 (MQ=255)
ggATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACgccgcc > 1:2799130/1‑93 (MQ=255)
gATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCa < 1:3248698/93‑1 (MQ=255)
gATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCa > 1:3359500/1‑93 (MQ=255)
gATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCa < 1:5881724/93‑1 (MQ=255)
ttGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAc < 1:2341429/93‑1 (MQ=255)
ttGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAc < 1:110373/93‑1 (MQ=255)
gCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACgg < 2:3619062/93‑1 (MQ=255)
cGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCaa > 1:2694853/1‑93 (MQ=255)
cGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCaa < 1:1498482/93‑1 (MQ=255)
ggCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCaaa > 2:2035193/1‑93 (MQ=255)
ggCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCaaa < 2:2371044/93‑1 (MQ=255)
cgcgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGa < 1:996116/93‑1 (MQ=255)
gcgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAc < 2:5975561/93‑1 (MQ=255)
gcgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAc > 2:5685976/1‑93 (MQ=255)
gcgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAc > 2:1253662/1‑93 (MQ=255)
gcgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAc > 2:4146854/1‑93 (MQ=255)
gATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTg > 2:5351232/1‑93 (MQ=255)
aTAAAGACCGCTCCCTCAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc < 2:4662146/93‑1 (MQ=255)
gagaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAt < 1:309320/93‑1 (MQ=255)
gagaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAt > 2:217104/1‑93 (MQ=255)
agaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg < 2:5011838/93‑1 (MQ=255)
agaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg < 2:2663894/93‑1 (MQ=255)
agaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg < 1:4019776/93‑1 (MQ=255)
gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt < 2:4734345/93‑1 (MQ=255)
gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt < 1:6126707/93‑1 (MQ=255)
gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt > 2:4392314/1‑93 (MQ=255)
tCGCTGCCTAACCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTcc < 1:1162123/93‑1 (MQ=255)
gcggCCTACGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTGTTCTGGCGTCACGCCGCCATCGGCAAAGACTGCGATGTCCGa < 1:6441696/90‑1 (MQ=255)
ctcccTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGAt < 1:3611441/90‑1 (MQ=255)
gCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATgg > 2:4497602/1‑93 (MQ=255)
gCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATgg < 1:1661353/93‑1 (MQ=255)
ccTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGc < 2:2737995/93‑1 (MQ=255)
cTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCa > 1:875120/1‑93 (MQ=255)
aaGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAt < 1:209731/93‑1 (MQ=255)
aGCCCGCCCCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATa < 2:4452821/93‑1 (MQ=255)
gcccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAc < 2:486616/93‑1 (MQ=255)
gcccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAc > 1:5706616/1‑93 (MQ=255)
ccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCg > 1:265655/1‑93 (MQ=255)
cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc > 2:3165843/1‑93 (MQ=255)
cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc > 2:846703/1‑93 (MQ=255)
cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc > 1:1744927/1‑93 (MQ=255)
cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc > 1:4168113/1‑93 (MQ=255)
cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc < 1:485620/93‑1 (MQ=255)
gcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCt < 2:5797420/93‑1 (MQ=255)
gcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCt > 2:5597740/1‑93 (MQ=255)
cccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCttt > 2:1971113/1‑93 (MQ=255)
cccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCttt > 2:3734963/1‑93 (MQ=255)
ccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCtttt > 2:1558884/1‑93 (MQ=255)
cTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTa > 2:1119639/1‑93 (MQ=255)
cTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTa < 2:5148941/93‑1 (MQ=255)
cTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTa > 2:3869715/1‑93 (MQ=255)
gCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAc > 1:4991504/1‑93 (MQ=255)
cacaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACg > 2:1443051/1‑93 (MQ=255)
acaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGc > 2:2820671/1‑93 (MQ=255)
caACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCt > 1:4554311/1‑93 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt < 2:1235154/93‑1 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt < 2:4291492/93‑1 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt > 1:5507730/1‑93 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt < 1:5606461/93‑1 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt > 1:758977/1‑93 (MQ=255)
tGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAt > 2:6391440/1‑93 (MQ=255)
tGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAt < 1:5954386/93‑1 (MQ=255)
gCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATg < 1:444824/93‑1 (MQ=255)
cGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGt < 1:5452683/93‑1 (MQ=255)
cGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGt < 1:2477163/93‑1 (MQ=255)
cGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGt < 1:5333718/93‑1 (MQ=255)
tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt < 1:542772/93‑1 (MQ=255)
tATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTg > 1:1962323/1‑93 (MQ=255)
aTCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGc > 2:1657719/1‑93 (MQ=255)
aTCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGc < 2:2960672/93‑1 (MQ=255)
ccACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCgg > 1:6169962/1‑93 (MQ=255)
cACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGa < 1:6231525/93‑1 (MQ=255)
aCTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAc > 1:1447639/1‑93 (MQ=255)
cTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAcc > 1:2062478/1‑93 (MQ=255)
cTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAcc > 1:3426433/1‑93 (MQ=255)
cTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAcc < 2:6258127/93‑1 (MQ=255)
tGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCa < 2:3395745/93‑1 (MQ=255)
gcCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCaaaa < 1:4622213/93‑1 (MQ=255)
gcCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCaaaa < 1:2521880/93‑1 (MQ=255)
ccAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAg < 2:3697438/93‑1 (MQ=255)
ccAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAg > 1:5633312/1‑93 (MQ=255)
cAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCTAAAGc > 1:3801783/1‑93 (MQ=255)
cAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGc > 1:5977869/1‑93 (MQ=255)
aGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGcc > 2:5872139/1‑93 (MQ=255)
aGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGcc < 2:1749525/93‑1 (MQ=255)
ggTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCg > 1:3174574/1‑93 (MQ=255)
ggTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCg > 2:3994707/1‑93 (MQ=255)
gTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGa > 1:5198372/1‑93 (MQ=255)
|
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG > NC_000913/3870672‑3870851
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAA > NC_000913/3870672‑3870857
|
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G > SRR4302534.1818022/1‑94 (MQ=60)
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G > SRR4302534.3252421/1‑94 (MQ=60)
CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G‑G > SRR4302534.6427706/1‑94 (MQ=60)
GCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTC < SRR4302534.2029212/94‑1 (MQ=60)
GCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTC < SRR4302534.6553767/94‑1 (MQ=60)
GCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTC > SRR4302534.1998229/1‑94 (MQ=60)
GCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCAC < SRR4302534.1243114/94‑1 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACG > SRR4302534.2335577/1‑94 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACG < SRR4302534.3208188/94‑1 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACG > SRR4302534.3707372/1‑94 (MQ=60)
TCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGC > SRR4302534.1395443/1‑94 (MQ=60)
TCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGC > SRR4302534.5765028/1‑94 (MQ=60)
TTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCC < SRR4302534.6069592/94‑1 (MQ=60)
CTAGGAATTGCCGGGGGCGAGAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCC < SRR4302534.271374/94‑1 (MQ=60)
CTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCC < SRR4302534.4948962/94‑1 (MQ=60)
cacggatccCCCGGCGCTATAGAGATCGCTCCCTAACCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCCGTCACGCCG < SRR4302534.109954/85‑1 (MQ=60)
ACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGC > SRR4302534.4740371/1‑94 (MQ=60)
ACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCAACTCCGCCAGGTTTTCTGG‑CGTCACGCCCC > SRR4302534.1255103/1‑94 (MQ=60)
CGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCC > SRR4302534.2872742/1‑94 (MQ=60)
CGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCC > SRR4302534.71684/1‑94 (MQ=60)
CGGATTCCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCC < SRR4302534.2337561/94‑1 (MQ=60)
GGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCA > SRR4302534.3449482/1‑94 (MQ=60)
GATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAA < SRR4302534.3335205/94‑1 (MQ=60)
GATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAA < SRR4302534.6041430/94‑1 (MQ=60)
ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAAC < SRR4302534.6416059/94‑1 (MQ=60)
TTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACG < SRR4302534.4680618/94‑1 (MQ=60)
TTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACG < SRR4302534.113313/94‑1 (MQ=60)
TTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACG < SRR4302534.2403570/94‑1 (MQ=60)
GCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGC > SRR4302534.4561476/1‑94 (MQ=60)
GCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGC > SRR4302534.3965542/1‑94 (MQ=60)
CCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAA < SRR4302534.2548647/94‑1 (MQ=60)
CCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAA > SRR4302534.2766059/1‑94 (MQ=60)
CCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAA < SRR4302534.5562244/94‑1 (MQ=60)
CGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAA < SRR4302534.1537924/94‑1 (MQ=60)
GGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAG > SRR4302534.3846452/1‑94 (MQ=60)
GCGCGATAGAGATCACTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAAGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGA < SRR4302534.6080200/94‑1 (MQ=60)
CGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGAC < SRR4302534.1021630/94‑1 (MQ=60)
CCGATAGAGAGAGCTGCCTACGCCCGCCCCTGCACAACCTGCTTCTCTCCACTGCGCCCGGTTTCCTGG‑CGTCACGCCGCCAACTGCAAAGACT < SRR4302534.5922912/94‑1 (MQ=44)
GATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGC > SRR4302534.2429002/1‑94 (MQ=60)
GATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGC < SRR4302534.2772041/94‑1 (MQ=60)
CATAGAGACCGCTGCCTAAGCCCGCAGCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGC < SRR4302534.6046490/94‑1 (MQ=60)
ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCG > SRR4302534.2406510/1‑94 (MQ=60)
TAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGA > SRR4302534.5475719/1‑94 (MQ=60)
AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCTAT < SRR4302534.6348040/94‑1 (MQ=60)
AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGAT > SRR4302534.1738991/1‑94 (MQ=60)
GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATG < SRR4302534.317307/94‑1 (MQ=60)
AGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGT < SRR4302534.4127543/94‑1 (MQ=60)
GATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTC < SRR4302534.6293349/94‑1 (MQ=60)
ATCTCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCC < SRR4302534.5058675/94‑1 (MQ=60)
ATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCC > SRR4302534.265194/1‑94 (MQ=60)
tccccGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCG < SRR4302534.3839818/89‑1 (MQ=60)
ccgcgcctTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCAAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCA < SRR4302534.1514414/86‑1 (MQ=60)
TCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCG < SRR4302534.1525478/94‑1 (MQ=60)
TCGCTGCCTAACCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCG < SRR4302534.1192618/94‑1 (MQ=60)
TCGCTCCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCG < SRR4302534.5637868/94‑1 (MQ=60)
GCGGCCTACGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTGTTCTGG‑CGTCACGCCGCCATCGGCAAAGACTGCGATGTCCGAT < SRR4302534.6615292/94‑1 (MQ=60)
CTTCCTAACCCCGCCCCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGTCTGCGATGTCCGATG < SRR4302534.2082905/94‑1 (MQ=60)
CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG > SRR4302534.6140052/1‑94 (MQ=60)
CTCCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG < SRR4302534.3708558/94‑1 (MQ=60)
TGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGG < SRR4302534.5396304/94‑1 (MQ=60)
GCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGC < SRR4302534.573380/94‑1 (MQ=60)
GCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGC < SRR4302534.1704624/94‑1 (MQ=60)
GCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGC > SRR4302534.4775420/1‑94 (MQ=60)
CCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCA > SRR4302534.897259/1‑94 (MQ=60)
GTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGATTTCTGG‑CGTCACGACGCCCACGGCAAAGACTGCGATCTCCGATAGCAA > SRR4302534.2736284/1‑94 (MQ=60)
CTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAA > SRR4302534.6008549/1‑94 (MQ=60)
TAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT > SRR4302534.115701/1‑94 (MQ=60)
AAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATA > SRR4302534.5498469/1‑94 (MQ=60)
AAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATA < SRR4302534.215238/94‑1 (MQ=60)
AAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATA > SRR4302534.514158/1‑94 (MQ=60)
AGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAC > SRR4302534.5861202/1‑94 (MQ=60)
AGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAC < SRR4302534.5793760/94‑1 (MQ=60)
CCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCG > SRR4302534.272547/1‑94 (MQ=60)
CCCGCCCCTGCACAACCTGCATCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGCTGGCAATACCG > SRR4302534.6405060/1‑94 (MQ=60)
CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC > SRR4302534.1790213/1‑94 (MQ=60)
CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC > SRR4302534.4280699/1‑94 (MQ=60)
CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC > SRR4302534.2132242/1‑94 (MQ=60)
CGCCTCTGCACAACCTGCGTCTATCCACTGCCCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCT < SRR4302534.4250902/94‑1 (MQ=60)
CGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCT < SRR4302534.497773/94‑1 (MQ=60)
CGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGAAATACCGCT > SRR4302534.170143/1‑94 (MQ=60)
GCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTT < SRR4302534.990283/94‑1 (MQ=60)
GCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTT < SRR4302534.823657/94‑1 (MQ=60)
CCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTT < SRR4302534.968545/94‑1 (MQ=60)
CCCCTGCACAACCTGCGTCTAGCCACTGAGCCAGGTTTTCTGG‑CGTCACGCCGCAAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTT < SRR4302534.3445620/94‑1 (MQ=60)
CCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTT < SRR4302534.2578691/94‑1 (MQ=60)
CCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTA < SRR4302534.5785396/94‑1 (MQ=60)
CCTGCACAACCTGCGTCTATCCACTGCTCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGTCAATACCGCTTTTA < SRR4302534.6379549/94‑1 (MQ=60)
CCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTA > SRR4302534.4394487/1‑94 (MQ=60)
CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAA > SRR4302534.3183892/1‑94 (MQ=60)
CTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAA > SRR4302534.5849745/1‑94 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC > SRR4302534.5126535/1‑94 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC < SRR4302534.5097300/94‑1 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGATTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC < SRR4302534.4573898/94‑1 (MQ=60)
GCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACG < SRR4302534.6164329/94‑1 (MQ=60)
CCAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCT < SRR4302534.2137050/94‑1 (MQ=60)
ACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCT > SRR4302534.6040635/1‑94 (MQ=60)
ACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCT > SRR4302534.4677772/1‑94 (MQ=60)
CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT > SRR4302534.2915688/1‑94 (MQ=60)
CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT > SRR4302534.6601703/1‑94 (MQ=60)
AACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTT < SRR4302534.6320715/94‑1 (MQ=60)
AACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTT > SRR4302534.777805/1‑94 (MQ=60)
AACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTT > SRR4302534.5656291/1‑94 (MQ=60)
ACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTG < SRR4302534.5758107/94‑1 (MQ=60)
CCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGA < SRR4302534.1972781/94‑1 (MQ=60)
CCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGA > SRR4302534.3396418/1‑94 (MQ=60)
CTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT < SRR4302534.2770532/94‑1 (MQ=60)
TGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATG < SRR4302534.6116070/94‑1 (MQ=60)
TGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATG < SRR4302534.3284015/94‑1 (MQ=60)
GCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT < SRR4302534.456111/94‑1 (MQ=60)
GCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT > SRR4302534.3889776/1‑94 (MQ=60)
GGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA < SRR4302534.4585255/94‑1 (MQ=60)
CGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA < SRR4302534.5477561/94‑1 (MQ=60)
CGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA < SRR4302534.5599608/94‑1 (MQ=60)
CGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA < SRR4302534.2542992/94‑1 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT < SRR4302534.1759890/94‑1 (MQ=60)
TCTATCCCCTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATT < SRR4302534.2730196/94‑1 (MQ=60)
TCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATT < SRR4302534.1493935/94‑1 (MQ=60)
TCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATT < SRR4302534.556190/94‑1 (MQ=60)
CTATCCACTGCGCCAGTTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302534.560390/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302534.347892/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG > SRR4302534.2013686/1‑94 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302534.3324609/94‑1 (MQ=60)
ATCCACTGCGCCAGGTGTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCG < SRR4302534.859084/94‑1 (MQ=60)
TCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGG > SRR4302534.6337786/1‑94 (MQ=60)
CCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGA > SRR4302534.2085485/1‑94 (MQ=60)
CCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGA < SRR4302534.6134458/94‑1 (MQ=60)
TACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC > SRR4302534.5324769/1‑94 (MQ=60)
CACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC < SRR4302534.4256486/94‑1 (MQ=60)
CACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC > SRR4302534.1446572/1‑94 (MQ=60)
CACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC > SRR4302534.1485733/1‑94 (MQ=60)
CACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAC < SRR4302534.6400673/94‑1 (MQ=60)
ACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACC > SRR4302534.3518490/1‑94 (MQ=60)
ACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACC > SRR4302534.2116410/1‑94 (MQ=60)
CTGCGCAAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCA < SRR4302534.1432978/94‑1 (MQ=60)
TGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAA > SRR4302534.667815/1‑94 (MQ=60)
GCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG < SRR4302534.2588821/94‑1 (MQ=60)
GCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG < SRR4302534.4747634/94‑1 (MQ=60)
GCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG < SRR4302534.3560967/94‑1 (MQ=60)
GCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG > SRR4302534.5785779/1‑94 (MQ=60)
CCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCTAAAGC > SRR4302534.3903857/1‑94 (MQ=60)
CCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGC > SRR4302534.6140238/1‑94 (MQ=60)
CCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGC > SRR4302534.5573928/1‑94 (MQ=60)
CAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC > SRR4302534.4108576/1‑94 (MQ=60)
CAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC < SRR4302534.3053639/94‑1 (MQ=60)
CAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC < SRR4302534.5691236/94‑1 (MQ=60)
AGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG > SRR4302534.3208391/1‑94 (MQ=60)
AGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG < SRR4302534.3510398/94‑1 (MQ=60)
AGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG > SRR4302534.3258373/1‑94 (MQ=60)
GGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGA > SRR4302534.6187563/1‑94 (MQ=60)
GGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGA > SRR4302534.5338571/1‑94 (MQ=60)
GGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGA < SRR4302534.1573900/94‑1 (MQ=60)
GGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGA < SRR4302534.2704103/94‑1 (MQ=60)
TTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCCTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGA < SRR4302534.6310/94‑1 (MQ=60)
TCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACG < SRR4302534.4225014/94‑1 (MQ=60)
TCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACG < SRR4302534.2740477/94‑1 (MQ=60)
ctgG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG > SRR4302534.1247106/4‑94 (MQ=60)
tgG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA < SRR4302534.3499265/92‑1 (MQ=60)
tgG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA < SRR4302534.3959998/92‑1 (MQ=60)
tgG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGA < SRR4302534.3984692/92‑1 (MQ=60)
G‑G‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAA > SRR4302534.3783627/1‑94 (MQ=60)
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GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGGAA > NC_000913/3870672‑3870857
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |