Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,881,483 Δ1 bp intergenic (‑126/‑482) dnaA ← / → rpmH DnaA/50S ribosomal subunit protein L34

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,881,4830G.100.0% 1574.5 / NA 337intergenic (‑126/‑482)dnaA/rpmHDnaA/50S ribosomal subunit protein L34
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (171/166);  total (171/166)

Only 100 of 346 total aligned reads displayed.

GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTA  >  NC_000913/3881395‑3881570
                                                                                        |                                                                                       
  cTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGAt                                                                                  <  1:6524877/93‑1 (MQ=255)
  cTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGAt                                                                                  <  1:5630210/93‑1 (MQ=255)
   tGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATc                                                                                 >  2:2733800/1‑93 (MQ=255)
   tGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATc                                                                                 >  2:345439/1‑93 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  1:6899454/1‑93 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  2:8644299/1‑93 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  2:8472067/1‑93 (MQ=255)
    gAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATcc                                                                                >  2:3506566/1‑93 (MQ=255)
      aaCATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTg                                                                              >  1:2764323/1‑93 (MQ=255)
        cATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCa                                                                            <  2:1698798/93‑1 (MQ=255)
         aTTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaa                                                                           >  1:528070/1‑93 (MQ=255)
         aTTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaa                                                                           >  2:745073/1‑93 (MQ=255)
          ttCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaa                                                                          <  1:3539732/93‑1 (MQ=255)
           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         >  2:3087086/1‑93 (MQ=255)
           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         <  1:3965002/93‑1 (MQ=255)
           tCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGCCTGCGGTTATATGCCCGA‑TCAAGATCCTGCaaaa                                                                         <  2:5501751/93‑1 (MQ=255)
            cATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAc                                                                        <  2:5222124/93‑1 (MQ=255)
            cATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAc                                                                        <  1:7298659/93‑1 (MQ=255)
             aTGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACg                                                                       >  1:4284539/1‑93 (MQ=255)
             aTGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACg                                                                       >  1:4372264/1‑93 (MQ=255)
              tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGa                                                                      <  1:3070568/93‑1 (MQ=255)
              tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGa                                                                      >  2:8188505/1‑93 (MQ=255)
              tGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGa                                                                      <  1:1578975/93‑1 (MQ=255)
               gATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAt                                                                     <  2:3592066/93‑1 (MQ=255)
                aTTGTTGACGTACGTCGAAAAGGCCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                    <  1:7132906/93‑1 (MQ=255)
                aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                    <  2:4488362/93‑1 (MQ=255)
                aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                    <  2:6059722/93‑1 (MQ=255)
                aTTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATc                                                                    >  2:4529729/1‑93 (MQ=255)
                 ttgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCg                                                                   <  1:7553977/93‑1 (MQ=255)
                 ttgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCg                                                                   >  2:3981515/1‑93 (MQ=255)
                  tgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg                                                                  <  1:1806430/93‑1 (MQ=255)
                  tgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg                                                                  <  1:6402536/93‑1 (MQ=255)
                  tgttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCgg                                                                  <  2:6572509/93‑1 (MQ=255)
                    ttgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGa                                                                >  1:5384630/1‑93 (MQ=255)
                     tgACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAc                                                               <  2:6758287/93‑1 (MQ=255)
                       acgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcg                                                             >  2:1106345/1‑93 (MQ=255)
                       acgtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcg                                                             <  1:5765420/93‑1 (MQ=255)
                         gtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgcg                                                           >  1:8544745/1‑93 (MQ=255)
                         gtacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACcgcg                                                           >  2:8522946/1‑93 (MQ=255)
                          tacgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAACACGATCGGGACCGCgg                                                          >  2:4993524/1‑93 (MQ=255)
                           acgtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGa                                                         >  1:233151/1‑93 (MQ=255)
                             gtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATc                                                       <  2:5648863/93‑1 (MQ=255)
                             gtCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATc                                                       >  1:1438901/1‑93 (MQ=255)
                              tCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCa                                                      >  2:2044097/1‑93 (MQ=255)
                              tCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCa                                                      >  2:7748825/1‑93 (MQ=255)
                               cGAAAAGAGCCTGCTTGAGTGTGACGCACGAACCGCTGTCTGCGTTTATATGCCCGA‑TCAAGATCCTGCAAATCGAGCGGGCCCGCGGATCAt                                                     <  2:4841680/93‑1 (MQ=255)
                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    <  1:1043108/93‑1 (MQ=255)
                                gAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATa                                                    <  1:4505163/93‑1 (MQ=255)
                                  aaaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGc                                                  >  2:3738171/1‑93 (MQ=255)
                                   aaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGcc                                                 <  1:8469777/93‑1 (MQ=255)
                                   aaGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGcc                                                 <  1:2654690/93‑1 (MQ=255)
                                    aGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCt                                                <  2:7935475/93‑1 (MQ=255)
                                    aGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCt                                                <  1:6173901/93‑1 (MQ=255)
                                     gACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTa                                               >  1:2977175/1‑93 (MQ=255)
                                       cccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCTCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             >  1:1399080/1‑93 (MQ=255)
                                       cccTGCTTGAGGGTGACGCACGAACCGCTATCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTaaa                                             <  1:8114525/93‑1 (MQ=255)
                                        ccTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAc                                            >  1:6203782/1‑93 (MQ=255)
                                         cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt                                           >  1:8331442/1‑93 (MQ=255)
                                         cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt                                           <  1:6001309/93‑1 (MQ=255)
                                         cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt                                           <  2:3845077/93‑1 (MQ=255)
                                         cTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACt                                           >  1:6617974/1‑93 (MQ=255)
                                          tGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg                                          <  1:6451266/93‑1 (MQ=255)
                                           gCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgc                                         <  2:2454060/93‑1 (MQ=255)
                                            cTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTgcg                                        <  2:6301914/93‑1 (MQ=255)
                                             ttGAGGGTGCCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCAAAACTgcgc                                       >  1:6762122/1‑93 (MQ=255)
                                               gAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCaa                                     >  1:6137576/1‑93 (MQ=255)
                                               gAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCaa                                     >  1:2428215/1‑93 (MQ=255)
                                                aGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAag                                    >  2:6438251/1‑93 (MQ=255)
                                                 gggTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAaga                                   >  2:1531862/1‑93 (MQ=255)
                                                   gTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAgaga                                 <  1:7083943/93‑1 (MQ=255)
                                                     gACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtc                               <  2:1381015/93‑1 (MQ=255)
                                                      gcGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtct                              <  2:7034861/92‑1 (MQ=255)
                                                        gaaCGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttc                            <  2:4115334/91‑1 (MQ=255)
                                                        gCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttc                            >  2:727789/1‑93 (MQ=255)
                                                        gCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttc                            <  1:2058145/93‑1 (MQ=255)
                                                        gCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttc                            <  1:4717211/93‑1 (MQ=255)
                                                        gCACGAACCGCTGTCTGCGGTTACATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAtcttc                            <  2:4738166/93‑1 (MQ=255)
                                                          aCGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTg                          >  2:1030129/1‑93 (MQ=255)
                                                           cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt                         >  1:1221008/1‑93 (MQ=255)
                                                           cGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGt                         >  2:7663325/1‑93 (MQ=255)
                                                            gAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGtt                        <  2:2362381/93‑1 (MQ=255)
                                                            gAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGtt                        <  2:1472645/93‑1 (MQ=255)
                                                             aaCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGttt                       >  2:5759203/1‑93 (MQ=255)
                                                             aaCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGttt                       >  1:5058233/1‑93 (MQ=255)
                                                             aaCCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGttt                       >  1:1328658/1‑93 (MQ=255)
                                                                cGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtctc                    <  2:2208182/93‑1 (MQ=255)
                                                                   tGTCTGCTGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcaca                 <  2:7395014/93‑1 (MQ=255)
                                                                   tGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcaca                 >  2:883028/1‑93 (MQ=255)
                                                                   tGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTcaca                 >  2:2941260/1‑93 (MQ=255)
                                                                    gTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAGCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAg                <  1:8718279/93‑1 (MQ=255)
                                                                    gTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAg                >  2:4921614/1‑93 (MQ=255)
                                                                         cGGTTTTATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCATCTGTGTCTCACAGAtttt           >  1:7845863/1‑93 (MQ=255)
                                                                          ggTTATATGCCGGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTc          <  1:1180749/93‑1 (MQ=255)
                                                                          ggTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTc          >  1:8163355/1‑93 (MQ=255)
                                                                          ggTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTc          >  1:3474449/1‑93 (MQ=255)
                                                                          ggTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTc          >  2:955562/1‑93 (MQ=255)
                                                                               tatGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAt     >  1:7447503/1‑93 (MQ=255)
                                                                                atGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAtt    <  1:4830993/93‑1 (MQ=255)
                                                                                atGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAtt    <  1:3172656/93‑1 (MQ=255)
                                                                                 tGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAttt   >  2:8358088/1‑93 (MQ=255)
                                                                                        |                                                                                       
GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTA  >  NC_000913/3881395‑3881570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 201 total aligned reads displayed.
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA  >  NC_000913/3881390‑3881576
                                                                                             |                                                                                             
ACTAAGGCTGAAACATTCATGATTGTTGTCGTACGTCGAAAAGACCCTGCTTGAGGGTGCCGCACGAACCGCTGTCTGCGGTTATATGCCCGAT                                                                                               <  SRR4302541.81002/94‑1 (MQ=60)
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAT                                                                                               >  SRR4302541.848608/1‑94 (MQ=60)
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAT                                                                                               <  SRR4302541.7153069/94‑1 (MQ=60)
  TAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCA                                                                                            <  SRR4302541.1494493/94‑1 (MQ=60)
  TAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCA                                                                                            >  SRR4302541.8680292/1‑94 (MQ=60)
  TAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCA                                                                                            <  SRR4302541.1494492/94‑1 (MQ=60)
  TAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCA                                                                                            >  SRR4302541.8355126/1‑94 (MQ=60)
  TAAGGATGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGACCCGCTGTCTGCGGTTATATGCCCGA‑TCA                                                                                            <  SRR4302541.5673757/94‑1 (MQ=60)
   AAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAA                                                                                           >  SRR4302541.3131436/1‑94 (MQ=60)
   AAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAA                                                                                           >  SRR4302541.357680/1‑94 (MQ=60)
   AAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAA                                                                                           <  SRR4302541.3546327/94‑1 (MQ=60)
    AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG                                                                                          >  SRR4302541.2293864/1‑94 (MQ=60)
    AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG                                                                                          >  SRR4302541.6806293/1‑94 (MQ=60)
    AGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAG                                                                                          <  SRR4302541.7650577/94‑1 (MQ=60)
     GGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGA                                                                                         >  SRR4302541.3368543/1‑94 (MQ=60)
       CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC                                                                                       <  SRR4302541.6591469/94‑1 (MQ=60)
       CTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATC                                                                                       <  SRR4302541.5687803/94‑1 (MQ=60)
        TGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCC                                                                                      >  SRR4302541.6973081/1‑94 (MQ=60)
         GAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCT                                                                                     <  SRR4302541.4873946/94‑1 (MQ=60)
         GAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCT                                                                                     >  SRR4302541.8916621/1‑94 (MQ=60)
         GAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCT                                                                                     <  SRR4302541.6646678/94‑1 (MQ=60)
         GAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACAAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCT                                                                                     <  SRR4302541.8583267/94‑1 (MQ=60)
          AAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTG                                                                                    >  SRR4302541.2792143/1‑94 (MQ=60)
            ACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCA                                                                                  >  SRR4302541.1179276/1‑94 (MQ=60)
            ACATTCATGATTGGTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCGGCGGTTATATGCCCGA‑TCAAGATCCTGCA                                                                                  <  SRR4302541.3490848/94‑1 (MQ=60)
             CATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAA                                                                                 >  SRR4302541.533019/1‑94 (MQ=60)
             CATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAA                                                                                 >  SRR4302541.6722737/1‑94 (MQ=60)
              ATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAA                                                                                >  SRR4302541.6148461/1‑94 (MQ=60)
               TTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAA                                                                               <  SRR4302541.3575430/94‑1 (MQ=60)
               TTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAA                                                                               >  SRR4302541.5443642/1‑94 (MQ=60)
                TCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAAC                                                                              <  SRR4302541.4004370/94‑1 (MQ=60)
                 CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG                                                                             >  SRR4302541.4327333/1‑94 (MQ=60)
                 CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG                                                                             <  SRR4302541.3174405/94‑1 (MQ=60)
                 CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG                                                                             >  SRR4302541.4415947/1‑94 (MQ=60)
                 CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG                                                                             <  SRR4302541.7376560/94‑1 (MQ=60)
                 CATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACG                                                                             >  SRR4302541.4142678/1‑94 (MQ=60)
                  ATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGA                                                                            >  SRR4302541.1448949/1‑94 (MQ=60)
                  ATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGA                                                                            >  SRR4302541.6274093/1‑94 (MQ=60)
                   TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT                                                                           <  SRR4302541.7183880/94‑1 (MQ=60)
                   TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT                                                                           <  SRR4302541.1594751/94‑1 (MQ=60)
                   TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT                                                                           <  SRR4302541.4985766/94‑1 (MQ=60)
                   TGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGAT                                                                           <  SRR4302541.3101710/94‑1 (MQ=60)
                    GATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATC                                                                          <  SRR4302541.3365129/94‑1 (MQ=60)
                    GATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATC                                                                          >  SRR4302541.3076913/1‑94 (MQ=60)
                     ATTGTTGACGTACGTCGAAAAGGCCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCG                                                                         <  SRR4302541.7208914/94‑1 (MQ=60)
                     ATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCG                                                                         >  SRR4302541.3825958/1‑94 (MQ=60)
                     ATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCG                                                                         >  SRR4302541.1691938/1‑94 (MQ=60)
                      TTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGG                                                                        <  SRR4302541.7634698/94‑1 (MQ=60)
                      TTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGG                                                                        <  SRR4302541.6854970/94‑1 (MQ=60)
                      TTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGG                                                                        <  SRR4302541.1439822/94‑1 (MQ=60)
                      TTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGG                                                                        >  SRR4302541.2584071/1‑94 (MQ=60)
                       TGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGG                                                                       <  SRR4302541.6467865/94‑1 (MQ=60)
                       TGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGG                                                                       <  SRR4302541.1823975/94‑1 (MQ=60)
                        GTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGC                                                                      >  SRR4302541.5951756/1‑94 (MQ=60)
                        GTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGA                                                                      >  SRR4302541.5439908/1‑94 (MQ=60)
                        GGTGACGTGCGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGA                                                                      <  SRR4302541.2536601/94‑1 (MQ=60)
                         TTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAC                                                                     >  SRR4302541.5132609/1‑94 (MQ=60)
                         TTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAC                                                                     <  SRR4302541.5655991/94‑1 (MQ=60)
                          TGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGAACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACC                                                                    >  SRR4302541.8759773/1‑94 (MQ=60)
                          TGACGTACGTCGAAAAGACCCTGCTTCAGGGTGACGAACGAACCGCTGTCTGCGGTTATATGCCCGA‑CCAAGATCCTGCAAAACGATCGGGTCC                                                                    >  SRR4302541.1330436/1‑94 (MQ=60)
                           GACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCG                                                                   <  SRR4302541.4577552/94‑1 (MQ=60)
                           GACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCG                                                                   <  SRR4302541.8487123/94‑1 (MQ=60)
                           GACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCG                                                                   <  SRR4302541.5104281/94‑1 (MQ=60)
                            ACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGC                                                                  <  SRR4302541.4100632/94‑1 (MQ=60)
                            ACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGC                                                                  <  SRR4302541.5824094/94‑1 (MQ=60)
                             CGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCG                                                                 >  SRR4302541.8636597/1‑94 (MQ=60)
                              GTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGG                                                                >  SRR4302541.8556956/1‑94 (MQ=60)
                               TACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGA                                                               >  SRR4302541.641313/1‑94 (MQ=60)
                               TACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGA                                                               >  SRR4302541.234971/1‑94 (MQ=60)
                                ACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGAT                                                              <  SRR4302541.6245229/94‑1 (MQ=60)
                                 CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC                                                             >  SRR4302541.3548259/1‑94 (MQ=60)
                                 CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC                                                             <  SRR4302541.1614830/94‑1 (MQ=60)
                                 CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC                                                             <  SRR4302541.1864381/94‑1 (MQ=60)
                                 CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC                                                             <  SRR4302541.7043338/94‑1 (MQ=60)
                                 CGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATC                                                             >  SRR4302541.1452901/1‑94 (MQ=60)
                                  GTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCA                                                            <  SRR4302541.1172099/94‑1 (MQ=60)
                                    CGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATA                                                          >  SRR4302541.4360246/1‑94 (MQ=60)
                                     GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG                                                         <  SRR4302541.4550611/94‑1 (MQ=60)
                                     GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG                                                         <  SRR4302541.7451986/94‑1 (MQ=60)
                                     GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG                                                         <  SRR4302541.1052776/94‑1 (MQ=60)
                                     GAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAG                                                         >  SRR4302541.7798414/1‑94 (MQ=60)
                                      AAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGC                                                        <  SRR4302541.8173788/94‑1 (MQ=60)
                                      AAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGC                                                        >  SRR4302541.1373052/1‑94 (MQ=60)
                                       AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC                                                       >  SRR4302541.1318696/1‑94 (MQ=60)
                                       AAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCC                                                       >  SRR4302541.5160444/1‑94 (MQ=60)
                                        AAGACCCTGCTTGAGGGTGGCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCT                                                      <  SRR4302541.7087410/94‑1 (MQ=60)
                                        AAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCT                                                      <  SRR4302541.8561123/94‑1 (MQ=60)
                                        AAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCT                                                      <  SRR4302541.2681100/94‑1 (MQ=60)
                                        AAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCT                                                      <  SRR4302541.1533883/94‑1 (MQ=60)
                                         AGGCCCTGCTTGATGGTGACGCGCGGAGCGATCTCTGCGGTTATATGCGCGA‑TCAAGATCCTGCAACACGATCGGGACCGCGGATCATAGCCTA                                                     <  SRR4302541.6236980/94‑1 (MQ=41)
                                         AGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTA                                                     >  SRR4302541.3007194/1‑94 (MQ=60)
                                         AGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTA                                                     <  SRR4302541.6236979/94‑1 (MQ=60)
                                           ACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCTCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAA                                                   >  SRR4302541.1412765/1‑94 (MQ=60)
                                           ACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAA                                                   <  SRR4302541.7642598/94‑1 (MQ=60)
                                            CCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC                                                  >  SRR4302541.759702/1‑94 (MQ=60)
                                            CCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC                                                  <  SRR4302541.8497873/94‑1 (MQ=60)
                                            CCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC                                                  >  SRR4302541.8371445/1‑94 (MQ=60)
                                            CCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC                                                  >  SRR4302541.6267172/1‑94 (MQ=60)
                                            CCCTGCTTGAGGGTGACGCACGAACCGCTATCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAC                                                  <  SRR4302541.8203427/94‑1 (MQ=60)
                                            CCCTGCTTGAGGGGGACGCACGGACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATGCTGCAAAACGATCGGAACCGCGGATCATAGCCTAAAC                                                  >  SRR4302541.7679452/1‑94 (MQ=60)
                                             CCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACT                                                 <  SRR4302541.7297954/94‑1 (MQ=60)
                                             CCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACT                                                 >  SRR4302541.7392810/1‑94 (MQ=60)
                                             CCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACT                                                 >  SRR4302541.6685800/1‑94 (MQ=60)
                                             CCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACT                                                 >  SRR4302541.8421933/1‑94 (MQ=60)
                                              CTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTG                                                <  SRR4302541.6062787/94‑1 (MQ=60)
                                              CTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTG                                                <  SRR4302541.166022/94‑1 (MQ=60)
                                               TGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGC                                               <  SRR4302541.6517019/94‑1 (MQ=60)
                                               TGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGC                                               <  SRR4302541.6517020/94‑1 (MQ=60)
                                                GCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCG                                              <  SRR4302541.7435728/94‑1 (MQ=60)
                                                GCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCG                                              <  SRR4302541.4585817/94‑1 (MQ=60)
                                                 CTTGAGGGTGCCGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCAAAACTGCGC                                             >  SRR4302541.6834435/1‑94 (MQ=60)
                                                  TTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCA                                            <  SRR4302541.4549622/94‑1 (MQ=60)
                                                   TGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAA                                           >  SRR4302541.6200256/1‑94 (MQ=60)
                                                   TGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAA                                           >  SRR4302541.2452220/1‑94 (MQ=60)
                                                   TGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAA                                           <  SRR4302541.5003753/94‑1 (MQ=60)
                                                    GAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAG                                          <  SRR4302541.1210656/94‑1 (MQ=60)
                                                     AGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTTCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGA                                         >  SRR4302541.487354/1‑94 (MQ=60)
                                                     AGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGA                                         >  SRR4302541.2706202/1‑94 (MQ=60)
                                                      GGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAG                                        <  SRR4302541.8169068/94‑1 (MQ=60)
                                                      GGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAG                                        <  SRR4302541.1252695/94‑1 (MQ=60)
                                                      GGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAG                                        <  SRR4302541.7171651/94‑1 (MQ=60)
                                                      GGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAG                                        >  SRR4302541.5725805/1‑94 (MQ=60)
                                                        GTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAT                                      <  SRR4302541.2873613/94‑1 (MQ=60)
                                                        GTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAT                                      <  SRR4302541.7159292/94‑1 (MQ=60)
                                                         TGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATC                                     <  SRR4302541.7192004/94‑1 (MQ=60)
                                                         TGACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATC                                     >  SRR4302541.8758978/1‑94 (MQ=60)
                                                          GACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCT                                    >  SRR4302541.6031501/1‑94 (MQ=60)
                                                          GACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCT                                    <  SRR4302541.3119639/94‑1 (MQ=60)
                                                          GACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCT                                    <  SRR4302541.4504442/94‑1 (MQ=60)
                                                           ACGCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTT                                   <  SRR4302541.193920/94‑1 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 <  SRR4302541.2078019/94‑1 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 <  SRR4302541.6604577/94‑1 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 >  SRR4302541.5575000/1‑94 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 >  SRR4302541.6694218/1‑94 (MQ=60)
                                                             GCACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCT                                 <  SRR4302541.4765307/94‑1 (MQ=60)
                                                              CACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTG                                <  SRR4302541.6206335/94‑1 (MQ=60)
                                                              CACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTG                                >  SRR4302541.5366025/1‑94 (MQ=60)
                                                               ACGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGT                               >  SRR4302541.1232958/1‑94 (MQ=60)
                                                                CGAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTT                              <  SRR4302541.622337/94‑1 (MQ=60)
                                                                 GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT                             >  SRR4302541.5110259/1‑94 (MQ=60)
                                                                 GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT                             >  SRR4302541.1200642/1‑94 (MQ=60)
                                                                 GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT                             >  SRR4302541.5731829/1‑94 (MQ=60)
                                                                 GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT                             >  SRR4302541.1341712/1‑94 (MQ=60)
                                                                 GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT                             >  SRR4302541.688212/1‑94 (MQ=60)
                                                                 GAACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTT                             >  SRR4302541.6588585/1‑94 (MQ=60)
                                                                   ACCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCT                           >  SRR4302541.3545343/1‑94 (MQ=60)
                                                                    CCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTC                          <  SRR4302541.8602479/94‑1 (MQ=60)
                                                                    CCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTC                          >  SRR4302541.5850306/1‑94 (MQ=60)
                                                                    CCGCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTC                          >  SRR4302541.3654173/1‑94 (MQ=60)
                                                                     CGCTGGCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCA                         <  SRR4302541.7620258/94‑1 (MQ=60)
                                                                      GCTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCAC                        >  SRR4302541.2675663/1‑94 (MQ=60)
                                                                       CTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA                       >  SRR4302541.6494784/1‑94 (MQ=60)
                                                                       CTGTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACA                       >  SRR4302541.6581402/1‑94 (MQ=60)
                                                                         GTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGAGCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGA                     <  SRR4302541.8811519/94‑1 (MQ=60)
                                                                         GTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAAtggggcaggagatttctgtttttccacggt                     >  SRR4302541.2587316/1‑64 (MQ=60)
                                                                         GTCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGA                     >  SRR4302541.4409777/1‑94 (MQ=60)
                                                                          TCTGCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGAT                    <  SRR4302541.1397836/94‑1 (MQ=60)
                                                                             GCGGTTTTATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCATCTGTGTCTCACAGATTTT                 >  SRR4302541.7931864/1‑94 (MQ=60)
                                                                             GCGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTT                 <  SRR4302541.1416949/94‑1 (MQ=60)
                                                                              CGNTTATATNCCCGA‑TCAAGANNCTNCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                <  SRR4302541.156283/94‑1 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCTGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                >  SRR4302541.3803821/1‑94 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                >  SRR4302541.8252528/1‑94 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                >  SRR4302541.5372191/1‑94 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                <  SRR4302541.6113558/94‑1 (MQ=60)
                                                                              CGGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTC                >  SRR4302541.3509192/1‑94 (MQ=60)
                                                                               GGTTATATGCCGGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC               <  SRR4302541.1192161/94‑1 (MQ=60)
                                                                               GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATTTTCTGTTTCTCcaagctttccc               >  SRR4302541.778544/1‑83 (MQ=60)
                                                                               GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC               >  SRR4302541.3093890/1‑94 (MQ=60)
                                                                               GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC               <  SRR4302541.621013/94‑1 (MQ=60)
                                                                               GGTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCC               >  SRR4302541.4342478/1‑94 (MQ=60)
                                                                                GTTATATGCTC‑AATCAAGATCCTGGAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCC              <  SRR4302541.2405069/94‑1 (MQ=60)
                                                                                GTTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCC              <  SRR4302541.2405070/94‑1 (MQ=60)
                                                                                 TTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCG             <  SRR4302541.6254410/94‑1 (MQ=60)
                                                                                 TTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCG             >  SRR4302541.6379264/1‑94 (MQ=60)
                                                                                 TTATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCG             >  SRR4302541.2728292/1‑94 (MQ=60)
                                                                                  TATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGA            >  SRR4302541.8747043/1‑94 (MQ=60)
                                                                                  TATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGA            >  SRR4302541.2078745/1‑94 (MQ=60)
                                                                                  TATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGA            >  SRR4302541.7307944/1‑94 (MQ=60)
                                                                                   ATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTACACTGCGCAAGAGATCTTCTGTTTCTCACCGATTTTCCCGAT           >  SRR4302541.6562820/1‑94 (MQ=60)
                                                                                   ATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAT           >  SRR4302541.7527063/1‑94 (MQ=60)
                                                                                   ATATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTCCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGAT           >  SRR4302541.7725012/1‑94 (MQ=60)
                                                                                    TATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATT          >  SRR4302541.4673175/1‑94 (MQ=60)
                                                                                     ATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCTCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT         <  SRR4302541.8212655/94‑1 (MQ=60)
                                                                                     ATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT         <  SRR4302541.2938075/94‑1 (MQ=60)
                                                                                     ATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT         <  SRR4302541.3204713/94‑1 (MQ=60)
                                                                                     ATGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT         <  SRR4302541.4880241/94‑1 (MQ=60)
                                                                                     ACGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTT         <  SRR4302541.8212654/94‑1 (MQ=60)
                                                                                      TGCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTA        >  SRR4302541.8314235/1‑94 (MQ=60)
                                                                                       GCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTAT       <  SRR4302541.3078155/94‑1 (MQ=60)
                                                                                       GCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTAT       >  SRR4302541.1510255/1‑94 (MQ=60)
                                                                                       GCCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTAT       <  SRR4302541.2085071/94‑1 (MQ=60)
                                                                                        CCCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATC      >  SRR4302541.6848818/1‑94 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC     <  SRR4302541.2984713/94‑1 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCC     <  SRR4302541.8532201/94‑1 (MQ=60)
                                                                                         CCGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCA     >  SRR4302541.5774924/1‑94 (MQ=60)
                                                                                          CGA‑TCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCA    <  SRR4302541.6612068/94‑1 (MQ=60)
                                                                                             ATCAAGATCCTGCAAAGCGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA  >  SRR4302541.8678143/1‑94 (MQ=60)
                                                                                             ATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA  >  SRR4302541.3116499/1‑94 (MQ=60)
                                                                                             ATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA  >  SRR4302541.2669314/1‑94 (MQ=60)
                                                                                             ATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTACTGTTTCTCACAGATTTTCCCGATTTTTCCGCA  <  SRR4302541.7886733/94‑1 (MQ=60)
                                                                                             |                                                                                             
ACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGAGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCTCACAGATTTTCCCGATTTATCCACA  >  NC_000913/3881390‑3881576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑