Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,927,062 +G coding (2/1284 nt)
coding (169/183 nt)
yieM ←
b4564 ←
hypothetical protein
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,927,0621.G99.7% 1105.4 / ‑4.4 324coding (2/1284 nt)
coding (169/183 nt)
yieM
b4564
hypothetical protein
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/1);  new base G (145/178);  total (145/179)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 347 total aligned reads displayed.

ACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCACGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG  >  NC_000913/3926970‑3927148
                                                                                              |                                                                                      
  tgtgGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCagc                                                                                       <  2:2789601/93‑3 (MQ=255)
  tgtgGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCagc                                                                                       >  2:2579559/1‑91 (MQ=255)
   gtgGGGTGGAGAGGATCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGTGACTCGGGCATCTTTCAGCCGACTGCGCagcg                                                                                      <  1:225335/93‑4 (MQ=255)
    tgGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCagcgc                                                                                     <  1:5036630/93‑5 (MQ=255)
     ggCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTGGGGCGTCTTTCAGCCGACTGCGCAccgct                                                                                   >  2:6686790/1‑89 (MQ=255)
       cGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTc                                                                                  <  2:3604364/93‑1 (MQ=255)
        gTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCa                                                                                 <  2:8377588/93‑1 (MQ=255)
         tGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCAc                                                                                <  2:80620/93‑1 (MQ=255)
            agagGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGcc                                                                             >  1:7710675/1‑93 (MQ=255)
             gaggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCa                                                                            >  2:2156013/1‑93 (MQ=255)
              aggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAg                                                                           <  2:4862662/93‑1 (MQ=255)
               ggagCTGGCTTTGCTGATAGCACATCCCCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCTGACTGCGCAGCGCTTCACGCCAGc                                                                          <  2:1900886/93‑1 (MQ=255)
               ggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCGGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGc                                                                          <  2:7294783/93‑1 (MQ=255)
               ggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGc                                                                          >  1:8195586/1‑93 (MQ=255)
               ggagCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTACGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACCCCAGc                                                                          >  2:4240853/1‑93 (MQ=255)
                gagCTGGATTTGCTGATAGTACATCACCTCTTCGGTGAGGTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCg                                                                         >  2:4108450/1‑93 (MQ=255)
                 agCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCgg                                                                        <  2:3854981/93‑1 (MQ=255)
                    tGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGa                                                                     <  1:1661912/93‑1 (MQ=255)
                     ggCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGaa                                                                    <  1:3064150/93‑1 (MQ=255)
                     ggCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGaa                                                                    <  1:2468539/93‑1 (MQ=255)
                      gCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAc                                                                   <  2:7378718/93‑1 (MQ=255)
                            cTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACatcatc                                                             <  2:8512111/93‑1 (MQ=255)
                             tGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACAtcatca                                                            >  1:2657032/1‑93 (MQ=255)
                             tGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACAtcatca                                                            >  2:6265850/1‑93 (MQ=255)
                             cgATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACAtcatca                                                            <  1:1162002/92‑1 (MQ=255)
                              gATAGCACATCACCTCTTCGGTGAGTTCCGGAGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAg                                                           <  1:5514238/93‑1 (MQ=255)
                               aTAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGt                                                          >  2:4039513/1‑93 (MQ=255)
                                tAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTg                                                         <  2:8714777/93‑1 (MQ=255)
                                 aGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGa                                                        <  2:544554/93‑1 (MQ=255)
                                  gCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGAt                                                       <  2:6527323/93‑1 (MQ=255)
                                      aTCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCTTCAGTTATTgcc                                                   >  2:7816608/1‑93 (MQ=255)
                                      aTCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgcc                                                   >  1:3831037/1‑93 (MQ=255)
                                         aCCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCATCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgccgcc                                                >  1:4905791/1‑93 (MQ=255)
                                         aCCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTgccgcc                                                >  1:3377154/1‑93 (MQ=255)
                                          ccTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCt                                               <  2:581334/93‑1 (MQ=255)
                                          ccTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCt                                               <  2:2444097/93‑1 (MQ=255)
                                           ctctTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCtt                                              >  1:1978529/1‑93 (MQ=255)
                                           ctctTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGACtt                                              >  2:8423710/1‑93 (MQ=255)
                                            tctTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTc                                             >  2:4606720/1‑93 (MQ=255)
                                             ctTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCa                                            <  2:3416230/93‑1 (MQ=255)
                                             ctTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCa                                            <  1:8390283/93‑1 (MQ=255)
                                             ctTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCa                                            <  2:5095848/93‑1 (MQ=255)
                                              ttCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAg                                           >  2:1250171/1‑93 (MQ=255)
                                              ttCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAg                                           >  1:8104590/1‑93 (MQ=255)
                                              ttCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAg                                           <  1:6699366/93‑1 (MQ=255)
                                               tCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAgg                                          <  2:4693609/93‑1 (MQ=255)
                                               tCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAgg                                          <  1:891710/93‑1 (MQ=255)
                                               tCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAACCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAgg                                          >  2:7534339/1‑93 (MQ=255)
                                                cGGTGAGTTCCGGCGGGGCTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGc                                         <  2:2234034/93‑1 (MQ=255)
                                                cGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGc                                         <  2:2398439/93‑1 (MQ=255)
                                                cGGTGAGTTATGGCGGGACTGAGGCACCTTTCAGCCGACTGCGCGGCGTTCCACGCCAGTGGAGAACTGCATCAGTGATTGCCGCCGTCAgga                                         <  2:3521999/93‑2 (MQ=255)
                                                 ggTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCg                                        >  1:3488820/1‑93 (MQ=255)
                                                  gTGAGTTCCGGCGGGACTCGGGCATTTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGCCgg                                       >  1:7284673/1‑92 (MQ=255)
                                                  gTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCgg                                       >  2:5369134/1‑92 (MQ=255)
                                                   tGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTg                                      >  1:747361/1‑93 (MQ=255)
                                                   tGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTg                                      >  1:2802517/1‑93 (MQ=255)
                                                    gAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTgg                                     <  1:4151136/93‑1 (MQ=255)
                                                    gAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTgg                                     <  2:8296382/93‑1 (MQ=255)
                                                     aGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTggg                                    <  2:2531127/93‑1 (MQ=255)
                                                     aGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTggg                                    <  1:6952184/93‑1 (MQ=255)
                                                      gTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGa                                   <  1:5984415/93‑1 (MQ=255)
                                                       ttCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGaa                                  <  2:8745271/93‑1 (MQ=255)
                                                       ttCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGaa                                  >  1:6124059/1‑93 (MQ=255)
                                                        tCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAt                                 <  1:7912499/93‑1 (MQ=255)
                                                         ccGGCGAGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAtt                                <  1:1376646/93‑1 (MQ=255)
                                                            gcggGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAttttt                             >  1:1575059/1‑93 (MQ=255)
                                                            gcggGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAttttt                             >  2:7036073/1‑93 (MQ=255)
                                                              gggACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCa                           >  2:7682496/1‑93 (MQ=255)
                                                               ggACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCaa                          >  1:655179/1‑93 (MQ=255)
                                                                gACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCaaa                         <  1:8573728/93‑1 (MQ=255)
                                                                gACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCaaa                         >  1:1310519/1‑93 (MQ=255)
                                                                gACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCaaa                         <  1:1725698/93‑1 (MQ=255)
                                                                gACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCaaa                         >  2:1132551/1‑93 (MQ=255)
                                                                 aCTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaag                        >  2:8483660/1‑93 (MQ=255)
                                                                  cTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaaga                       >  1:4420993/1‑93 (MQ=255)
                                                                  cTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAaaga                       >  2:1564631/1‑93 (MQ=255)
                                                                     gggCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAagaaga                    >  2:1702435/1‑93 (MQ=255)
                                                                     gggCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAagaaga                    <  2:1184840/93‑1 (MQ=255)
                                                                      ggCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAc                   >  1:6406078/1‑93 (MQ=255)
                                                                      ggCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAc                   >  1:7517393/1‑93 (MQ=255)
                                                                       gCATCTTTCAGCCGACTGCGCAGCNNTNCACTCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAcc                  <  2:3939534/93‑1 (MQ=255)
                                                                       gCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAcc                  <  2:3440353/93‑1 (MQ=255)
                                                                       gCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAcc                  <  1:958692/93‑1 (MQ=255)
                                                                         aTCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGc                <  1:1895078/93‑1 (MQ=255)
                                                                         aTCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGc                <  1:3224500/93‑1 (MQ=255)
                                                                          tCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGcc               <  1:4624043/93‑1 (MQ=255)
                                                                            tttCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAg             <  1:3151959/93‑1 (MQ=255)
                                                                             ttCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGc            <  2:6393580/93‑1 (MQ=255)
                                                                             ttCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGc            <  1:1018187/93‑1 (MQ=255)
                                                                             ttCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGc            >  2:6153134/1‑93 (MQ=255)
                                                                                aGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGc         <  1:5662614/93‑1 (MQ=255)
                                                                                  ccGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCgg       <  1:4231020/93‑1 (MQ=255)
                                                                                   cGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGt      <  1:3759222/93‑1 (MQ=255)
                                                                                   cGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCCCCAGCTGCggg      >  1:2916243/1‑92 (MQ=255)
                                                                                     aCTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGa    <  1:2591366/93‑1 (MQ=255)
                                                                                     aCTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGa    <  1:6639451/93‑1 (MQ=255)
                                                                                     aCTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGa    >  2:7184145/1‑93 (MQ=255)
                                                                                      cTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAg   >  2:3104565/1‑93 (MQ=255)
                                                                                       tGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAgg  >  2:8193247/1‑93 (MQ=255)
                                                                                       tGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCATGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAgg  <  2:5974661/93‑1 (MQ=255)
                                                                                              |                                                                                      
ACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCACGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG  >  NC_000913/3926970‑3927148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCACGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  >  NC_000913/3926969‑3927155
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AACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCA                                                                                                <  SRR4302541.578150/94‑1 (MQ=60)
   TGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAgcg                                                                                             >  SRR4302541.925269/1‑91 (MQ=60)
    GTGGGGTGGAGAGGATCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGTGACTCGGGCATCTTTCAGCCGACTGCGCAGCGC                                                                                            <  SRR4302541.227075/94‑1 (MQ=60)
     TGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCT                                                                                           <  SRR4302541.5088449/94‑1 (MQ=60)
      GGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTT                                                                                          >  SRR4302541.3798510/1‑94 (MQ=60)
      GGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTT                                                                                          >  SRR4302541.1304424/1‑94 (MQ=60)
       GCGGGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTC                                                                                         <  SRR4302541.5023088/94‑1 (MQ=60)
           GGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCTGACTGCGCAGCGCTTCACGC                                                                                     >  SRR4302541.5467693/1‑94 (MQ=60)
           GGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGC                                                                                     <  SRR4302541.754491/94‑1 (MQ=60)
            GAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCC                                                                                    >  SRR4302541.7792684/1‑94 (MQ=60)
            GAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCC                                                                                    >  SRR4302541.3504062/1‑94 (MQ=60)
            GAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCC                                                                                    >  SRR4302541.6718171/1‑94 (MQ=60)
             AGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCA                                                                                   <  SRR4302541.6823183/94‑1 (MQ=60)
              GAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAG                                                                                  <  SRR4302541.7032549/94‑1 (MQ=60)
              GAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAG                                                                                  >  SRR4302541.1094721/1‑94 (MQ=60)
              GAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAG                                                                                  <  SRR4302541.6693083/94‑1 (MQ=60)
               AGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGC                                                                                 <  SRR4302541.1302345/94‑1 (MQ=60)
               AGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGC                                                                                 >  SRR4302541.8285028/1‑94 (MQ=60)
                 GAGCTGGCTTTGCTGATAGCACATCGCCGCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCACAGCGCTTCACGCCAGCGG                                                                               <  SRR4302541.102720/94‑1 (MQ=60)
                 GAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGG                                                                               >  SRR4302541.6274194/1‑94 (MQ=60)
                 GAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGG                                                                               >  SRR4302541.1910890/1‑94 (MQ=60)
                    CTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGA                                                                            >  SRR4302541.2855848/1‑94 (MQ=60)
                     TGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGGAGCGCTTCACGCCAGCGGGGAA                                                                           >  SRR4302541.1696416/1‑94 (MQ=60)
                     TGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAA                                                                           <  SRR4302541.3180001/94‑1 (MQ=60)
                     TGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAA                                                                           <  SRR4302541.1678310/94‑1 (MQ=60)
                     TGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGACGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAA                                                                           >  SRR4302541.4389766/1‑94 (MQ=60)
                      GGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCTACTGCGCAGCGCTTCACGCCAGCGGGGAAC                                                                          <  SRR4302541.8495588/94‑1 (MQ=60)
                      GGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAC                                                                          <  SRR4302541.3825351/94‑1 (MQ=60)
                      GGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAC                                                                          >  SRR4302541.7986905/1‑94 (MQ=60)
                      GGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAC                                                                          <  SRR4302541.3095215/94‑1 (MQ=60)
                      GGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAAC                                                                          <  SRR4302541.2493223/94‑1 (MQ=60)
                       GCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACA                                                                         <  SRR4302541.6478965/94‑1 (MQ=60)
                       GCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACA                                                                         <  SRR4302541.1568326/94‑1 (MQ=60)
                       GCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACA                                                                         >  SRR4302541.947067/1‑94 (MQ=60)
                        CTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACAT                                                                        <  SRR4302541.938548/94‑1 (MQ=60)
                         TTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATC                                                                       >  SRR4302541.1458174/1‑94 (MQ=60)
                            GCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATC                                                                    <  SRR4302541.827613/94‑1 (MQ=60)
                             CTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCA                                                                   <  SRR4302541.3759106/94‑1 (MQ=60)
                             CTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCA                                                                   >  SRR4302541.2683461/1‑94 (MQ=60)
                              TGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  >  SRR4302541.2189436/1‑94 (MQ=60)
                              TGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  >  SRR4302541.4470336/1‑94 (MQ=60)
                              TGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  <  SRR4302541.1364343/94‑1 (MQ=60)
                              TGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  <  SRR4302541.6571670/94‑1 (MQ=60)
                              TGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  <  SRR4302541.8224901/94‑1 (MQ=60)
                              CGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAG                                                                  <  SRR4302541.1173156/94‑1 (MQ=60)
                               GATAGCACATCACCTCTTCGGTGAGTTCCGGAGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGT                                                                 <  SRR4302541.5570692/94‑1 (MQ=60)
                                 acGCACATCACCGCTTCGGGGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTCCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGA                                                               <  SRR4302541.6081780/92‑1 (MQ=60)
                                 TAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGA                                                               >  SRR4302541.8129382/1‑94 (MQ=60)
                                    CACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTG                                                            <  SRR4302541.3601195/94‑1 (MQ=60)
                                    CACATCACCTCCTCGGTGAGTTCCGGCGAGCTGCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTG                                                            <  SRR4302541.3601194/94‑1 (MQ=60)
                                     ACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGC                                                           >  SRR4302541.1946883/1‑94 (MQ=60)
                                     ACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGC                                                           >  SRR4302541.1883780/1‑94 (MQ=60)
                                      CATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCC                                                          <  SRR4302541.5820431/94‑1 (MQ=60)
                                      CATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCC                                                          >  SRR4302541.3285045/1‑94 (MQ=60)
                                      CATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCC                                                          >  SRR4302541.3869634/1‑94 (MQ=60)
                                      CATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCC                                                          >  SRR4302541.4136072/1‑94 (MQ=60)
                                       ATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCG                                                         >  SRR4302541.2690223/1‑94 (MQ=60)
                                       ATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCG                                                         >  SRR4302541.1995714/1‑94 (MQ=60)
                                        TCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGC                                                        >  SRR4302541.7698580/1‑94 (MQ=60)
                                         CACCTCTTCGGTGAGTTCCGGCGGGTCTCGGGCATCTTTCATCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCC                                                       >  SRR4302541.7590829/1‑94 (MQ=60)
                                         CACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCATCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCC                                                       >  SRR4302541.4955839/1‑94 (MQ=60)
                                         CACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGCACATCATCAGTGATTGACGCC                                                       >  SRR4302541.8832702/1‑94 (MQ=60)
                                         CACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCC                                                       >  SRR4302541.3410822/1‑94 (MQ=60)
                                         CACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCC                                                       <  SRR4302541.5391257/94‑1 (MQ=60)
                                          ACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCT                                                      >  SRR4302541.4238778/1‑94 (MQ=60)
                                           CCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTT                                                     >  SRR4302541.1997643/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302541.2135111/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302541.3903104/1‑94 (MQ=60)
                                            CTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTC                                                    >  SRR4302541.3353855/1‑94 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302541.5855276/94‑1 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302541.8481124/94‑1 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  >  SRR4302541.8193419/1‑94 (MQ=60)
                                              CTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302541.6443586/94‑1 (MQ=60)
                                              CTTCGGGGAGTTCCGGCGGGGCTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAG                                                  <  SRR4302541.7431719/94‑1 (MQ=60)
                                               TTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGG                                                 <  SRR4302541.4918784/94‑1 (MQ=60)
                                               TTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGG                                                 <  SRR4302541.6769452/94‑1 (MQ=60)
                                               TTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGG                                                 <  SRR4302541.1041479/94‑1 (MQ=60)
                                                TCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGC                                                <  SRR4302541.899906/94‑1 (MQ=60)
                                                TCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGC                                                <  SRR4302541.6748294/94‑1 (MQ=60)
                                                 CGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCG                                               >  SRR4302541.3523760/1‑94 (MQ=60)
                                                 CGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCG                                               <  SRR4302541.7792587/94‑1 (MQ=60)
                                                 CGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGAGGGGAACATCATAAGTGATTGCCGCCTTCAGGCG                                               >  SRR4302541.2971147/1‑94 (MQ=60)
                                                  GGTGAGTTCCGGCGGGACTCGGGCATTTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGccgg                                              >  SRR4302541.7362413/1‑90 (MQ=60)
                                                  GGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGT                                              >  SRR4302541.4412547/1‑94 (MQ=60)
                                                  GGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGT                                              >  SRR4302541.1369185/1‑94 (MQ=60)
                                                  GGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGG                                              >  SRR4302541.2614490/1‑94 (MQ=60)
                                                   GTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTG                                             >  SRR4302541.754438/1‑94 (MQ=60)
                                                   GTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTG                                             <  SRR4302541.8440043/94‑1 (MQ=60)
                                                   GTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTG                                             >  SRR4302541.2830858/1‑94 (MQ=60)
                                                   GTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTG                                             <  SRR4302541.8267495/94‑1 (MQ=60)
                                                    TGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGG                                            >  SRR4302541.58970/1‑94 (MQ=60)
                                                     GAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGG                                           <  SRR4302541.2174235/94‑1 (MQ=60)
                                                     GAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGG                                           <  SRR4302541.4192179/94‑1 (MQ=60)
                                                      AGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGA                                          <  SRR4302541.7026325/94‑1 (MQ=60)
                                                      AGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGA                                          >  SRR4302541.8117738/1‑94 (MQ=60)
                                                       GTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAA                                         >  SRR4302541.6186605/1‑94 (MQ=60)
                                                       GTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAA                                         <  SRR4302541.6045664/94‑1 (MQ=60)
                                                        TTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAAT                                        <  SRR4302541.2964914/94‑1 (MQ=60)
                                                         TCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATT                                       <  SRR4302541.7999564/94‑1 (MQ=60)
                                                          CCGGCGAGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTT                                      <  SRR4302541.1390183/94‑1 (MQ=60)
                                                           CGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTT                                     <  SRR4302541.3216615/94‑1 (MQ=60)
                                                            GGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTT                                    >  SRR4302541.4335729/1‑94 (MQ=60)
                                                            GGCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTT                                    >  SRR4302541.1590807/1‑94 (MQ=60)
                                                             GCGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTC                                   >  SRR4302541.2654957/1‑94 (MQ=60)
                                                              CGGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCA                                  >  SRR4302541.1387333/1‑94 (MQ=60)
                                                               GGGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAA                                 >  SRR4302541.661360/1‑94 (MQ=60)
                                                                GGACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAA                                >  SRR4302541.1323422/1‑94 (MQ=60)
                                                                 GACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAG                               <  SRR4302541.8665801/94‑1 (MQ=60)
                                                                 GACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAG                               <  SRR4302541.8665802/94‑1 (MQ=60)
                                                                 GACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAG                               <  SRR4302541.1742558/94‑1 (MQ=60)
                                                                  ACTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGA                              >  SRR4302541.4465371/1‑94 (MQ=60)
                                                                   CTCTGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAA                             <  SRR4302541.1717057/94‑1 (MQ=60)
                                                                   CTCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAA                             >  SRR4302541.4638757/1‑94 (MQ=60)
                                                                    TCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAG                            <  SRR4302541.7573364/94‑1 (MQ=60)
                                                                    TCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAG                            <  SRR4302541.4817172/94‑1 (MQ=60)
                                                                    TCGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAG                            <  SRR4302541.789891/94‑1 (MQ=60)
                                                                     CGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGA                           >  SRR4302541.3238556/1‑94 (MQ=60)
                                                                     CGGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGA                           <  SRR4302541.271731/94‑1 (MQ=60)
                                                                      GGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAC                          >  SRR4302541.7597730/1‑94 (MQ=60)
                                                                      GGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAC                          <  SRR4302541.4212505/94‑1 (MQ=60)
                                                                      GGGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAC                          >  SRR4302541.6471429/1‑94 (MQ=60)
                                                                      CGGCATCTTTCAGCGGACTGCGCAGCCCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGAC                          <  SRR4302541.3155492/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302541.6750600/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302541.3468405/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         <  SRR4302541.3379248/94‑1 (MQ=60)
                                                                       GGCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACC                         >  SRR4302541.2606079/1‑94 (MQ=60)
                                                                        GCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCG                        <  SRR4302541.967739/94‑1 (MQ=60)
                                                                        GCATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCG                        <  SRR4302541.6198470/94‑1 (MQ=60)
                                                                         CATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGC                       <  SRR4302541.4898561/94‑1 (MQ=60)
                                                                         CATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGC                       >  SRR4302541.7798117/1‑94 (MQ=60)
                                                                         CATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGC                       >  SRR4302541.8246764/1‑94 (MQ=60)
                                                                          ATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCC                      >  SRR4302541.2550659/1‑94 (MQ=60)
                                                                          ATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCC                      <  SRR4302541.3257065/94‑1 (MQ=60)
                                                                          ATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCC                      <  SRR4302541.1913266/94‑1 (MQ=60)
                                                                          ATCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCC                      >  SRR4302541.160388/1‑94 (MQ=60)
                                                                           TCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCA                     <  SRR4302541.8483200/94‑1 (MQ=60)
                                                                           TCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCA                     >  SRR4302541.6090499/1‑94 (MQ=60)
                                                                           TCTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCA                     <  SRR4302541.4671065/94‑1 (MQ=60)
                                                                            CTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAG                    >  SRR4302541.2657097/1‑94 (MQ=60)
                                                                            CTTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAG                    <  SRR4302541.8883052/94‑1 (MQ=60)
                                                                             TTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGC                   <  SRR4302541.3183773/94‑1 (MQ=60)
                                                                             TTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGC                   >  SRR4302541.4134439/1‑94 (MQ=60)
                                                                             TTTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGGGATTGCCGCCTTCAGGCGTGGGAAGTTTTCAAAGAAGACCGCGAGC                   >  SRR4302541.2279372/1‑94 (MQ=60)
                                                                              TTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCT                  <  SRR4302541.1027597/94‑1 (MQ=60)
                                                                              TTCAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCT                  <  SRR4302541.7426655/94‑1 (MQ=60)
                                                                                CAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGC                >  SRR4302541.7066646/1‑94 (MQ=60)
                                                                                CAGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGC                <  SRR4302541.7336035/94‑1 (MQ=60)
                                                                                 AGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCG               <  SRR4302541.5720438/94‑1 (MQ=60)
                                                                                 AGCCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCG               <  SRR4302541.2765669/94‑1 (MQ=60)
                                                                                   CCGACTGCGCAGCGGTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGT             <  SRR4302541.6950548/94‑1 (MQ=60)
                                                                                   CCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCCGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCCAAGAAGACCGCCAGCTGCGGT             >  SRR4302541.5643695/1‑94 (MQ=60)
                                                                                   CCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGT             <  SRR4302541.1748678/94‑1 (MQ=60)
                                                                                   CCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGT             <  SRR4302541.4273179/94‑1 (MQ=60)
                                                                                   CCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGT             <  SRR4302541.2919831/94‑1 (MQ=60)
                                                                                   CCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGG             >  SRR4302541.5643696/1‑94 (MQ=60)
                                                                                   CCGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCCCCAGCTGCGGG             >  SRR4302541.2945576/1‑94 (MQ=60)
                                                                                    CGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCCGCTGCGGTG            >  SRR4302541.5425492/1‑94 (MQ=60)
                                                                                    CGACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTG            <  SRR4302541.3796998/94‑1 (MQ=60)
                                                                                     GACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGG           >  SRR4302541.2285160/1‑94 (MQ=60)
                                                                                     GACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGA           >  SRR4302541.3005984/1‑94 (MQ=60)
                                                                                     GACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGA           >  SRR4302541.669101/1‑94 (MQ=60)
                                                                                     GACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGA           <  SRR4302541.8857302/94‑1 (MQ=60)
                                                                                      CCTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAG          <  SRR4302541.1609138/94‑1 (MQ=60)
                                                                                      ACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAG          <  SRR4302541.2617332/94‑1 (MQ=60)
                                                                                      ACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAG          <  SRR4302541.6707529/94‑1 (MQ=60)
                                                                                      ACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAG          <  SRR4302541.6146598/94‑1 (MQ=60)
                                                                                      ACTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAG          <  SRR4302541.4992512/94‑1 (MQ=60)
                                                                                       CTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG         <  SRR4302541.3586729/94‑1 (MQ=60)
                                                                                       CTGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGG         >  SRR4302541.1603034/1‑94 (MQ=60)
                                                                                        TGCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGC        >  SRR4302541.3168389/1‑94 (MQ=60)
                                                                                         GCGCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCC       <  SRR4302541.1785732/94‑1 (MQ=60)
                                                                                           GCAGCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAG     >  SRR4302541.6318178/1‑94 (MQ=60)
                                                                                             GCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  <  SRR4302541.6543239/94‑1 (MQ=60)
                                                                                             GCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  <  SRR4302541.1769178/94‑1 (MQ=60)
                                                                                             GCGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  <  SRR4302541.6065692/94‑1 (MQ=60)
                                                                                             |                                                                                              
AACTGTGGCGTGGAGAGGAGCTGGCTTTGCTGATAGCACATCACCTCTTCGGTGAGTTCCGGCGGGACTCGGGCATCTTTCAGCCGACTGCGCACGCTTCACGCCAGCGGGGAACATCATCAGTGATTGCCGCCTTCAGGCGTGGGAATTTTTCAAAGAAGACCGCCAGCTGCGGTGAGGCCAGCAG  >  NC_000913/3926969‑3927155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: