Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,930,568	+G	intergenic (+66/‑373)	kup → / → rbsD	low affinity potassium transport system/RbsD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,930,567	1	.	G	99.7%	1106.6 / ‑3.9	322	intergenic (+65/‑374)	kup/rbsD	low affinity potassium transport system/RbsD
Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (158/163); total (159/163)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.85e-01

Only 100 of 352 total aligned reads displayed.

GCACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑GCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTAT  >  NC_000913/3930475‑3930654

gcACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑tt                                                                                          >  1:6443092/1‑93 (MQ=255)

gcACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑tt                                                                                          >  1:3234329/1‑93 (MQ=255)

gcACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑tt                                                                                          <  1:8031112/93‑1 (MQ=255)

 cACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑g                                                                                        >  2:6739909/1‑93 (MQ=255)

 cACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑g                                                                                        <  2:5293049/93‑1 (MQ=255)

 cACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑g                                                                                        >  2:2412185/1‑93 (MQ=255)

 cACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑g                                                                                        >  2:1111123/1‑93 (MQ=255)

  aCCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑gg                                                                                       <  2:8316781/93‑2 (MQ=255)

  aCCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑gg                                                                                       <  1:8055278/93‑2 (MQ=255)

   ccGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑ggc                                                                                      <  2:2868911/93‑3 (MQ=255)

   ccGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑ggc                                                                                      >  1:3328069/1‑91 (MQ=255)

   ccGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCACACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑ggc                                                                                      >  2:2322796/1‑91 (MQ=255)

    cGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑ggcg                                                                                     <  1:7268681/93‑4 (MQ=255)

     gAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑ggcga                                                                                    <  1:923764/93‑5 (MQ=255)

     gAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑ggcga                                                                                    >  2:5133545/1‑89 (MQ=255)

     gAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑ggcga                                                                                    >  1:3419010/1‑89 (MQ=255)

       aGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCgaga                                                                                   >  1:7150114/1‑93 (MQ=255)

        gACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGaa                                                                                  <  1:1167310/93‑1 (MQ=255)

          cGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAAc                                                                                <  1:6300575/93‑1 (MQ=255)

          cGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAAc                                                                                <  1:235418/93‑1 (MQ=255)

           gCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACg                                                                               >  1:8296209/1‑93 (MQ=255)

            cTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGc                                                                              <  2:4944169/93‑1 (MQ=255)

             tCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGAGGCAAGTTATGGTTT‑GCGAGAAACGcc                                                                             >  2:7896911/1‑93 (MQ=255)

              ccATGTGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCa                                                                            >  1:2834291/1‑93 (MQ=255)

              ccATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCa                                                                            >  1:8121706/1‑93 (MQ=255)

               cATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCaa                                                                           >  2:683557/1‑93 (MQ=255)

               cATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCaa                                                                           <  2:1639398/93‑1 (MQ=255)

                atatGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCaaa                                                                          >  1:5377435/1‑93 (MQ=255)

                atatGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCaaa                                                                          <  1:158744/93‑1 (MQ=255)

                 tatGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTTGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAAc                                                                         >  1:7117632/1‑93 (MQ=255)

                 tatGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAAc                                                                         >  2:6243257/1‑93 (MQ=255)

                 tatGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAAc                                                                         <  2:3651468/93‑1 (MQ=255)

                 tatGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAAc                                                                         >  2:8469970/1‑93 (MQ=255)

                 tatGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAAc                                                                         >  2:4597872/1‑93 (MQ=255)

                  atGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCACACg                                                                        >  1:4803642/1‑93 (MQ=255)

                  atGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACg                                                                        >  1:8591345/1‑93 (MQ=255)

                  atGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACg                                                                        <  2:8087967/93‑1 (MQ=255)

                  atGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACg                                                                        <  1:1773707/93‑1 (MQ=255)

                    gTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTa                                                                      <  2:7433269/93‑1 (MQ=255)

                     tCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTag                                                                     >  2:5554921/1‑93 (MQ=255)

                     tCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTag                                                                     >  1:2029205/1‑93 (MQ=255)

                         tAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGCCAAGTTATGG‑TTGGCGAGaaa                                                                                 >  2:2044946/1‑77 (MQ=255)

                          aaCGTCCGTCTGGTACAGATTGAACAAGTGTCGCCCACTAGCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAgaagaa                                                                <  2:4441830/93‑1 (MQ=255)

                          aaCGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAgaagaa                                                                >  1:5746779/1‑93 (MQ=255)

                           aCGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGaagaag                                                               >  2:1316945/1‑93 (MQ=255)

                           aCGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGaagaag                                                               <  1:4982029/93‑1 (MQ=255)

                            cgtccgtcGGGTACAGATTGAACAACTGTCGCCCACTTTATGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGt                                                              >  1:1463648/1‑93 (MQ=255)

                             gtccgtcGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGtt                                                             >  2:1197286/1‑93 (MQ=255)

                             gtccgtcGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGtt                                                             <  2:33717/93‑1 (MQ=255)

                              tccgtcGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGttt                                                            >  1:1243417/1‑93 (MQ=255)

                                cgtcGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTc                                                          >  2:631992/1‑93 (MQ=255)

                                 gtcGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTcc                                                         >  1:6000163/1‑93 (MQ=255)

                                  tcGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCa                                                        <  2:4081877/93‑1 (MQ=255)

                                  tcGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCa                                                        >  2:731342/1‑93 (MQ=255)

                                   cGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGTGAGAAACGCCAAACGTAGAAGAAGTTTTCCAc                                                       <  2:2498842/93‑1 (MQ=255)

                                    gggTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCAcc                                                      >  2:3158353/1‑93 (MQ=255)

                                    gggTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCAcc                                                      <  1:2629517/93‑1 (MQ=255)

                                     ggTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCg                                                     >  1:1014036/1‑93 (MQ=255)

                                      gTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGc                                                    <  1:3913144/93‑1 (MQ=255)

                                      gTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGc                                                    <  2:473124/93‑1 (MQ=255)

                                       tACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCt                                                   >  1:6768950/1‑93 (MQ=255)

                                       tACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCt                                                   <  2:308396/93‑1 (MQ=255)

                                        aCAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTg                                                  >  1:4229082/1‑93 (MQ=255)

                                          aGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCg                                                >  2:7110024/1‑93 (MQ=255)

                                           gATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCgg                                               <  2:7680583/93‑1 (MQ=255)

                                             ttGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTc                                             <  1:6109334/93‑1 (MQ=255)

                                              tGAACAACTGTCGCCCAGTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCt                                            <  2:2576373/93‑1 (MQ=255)

                                                gacatcTGTCGCCATCTTTCTGGCGCGTGGTGGAAGGTTGTGG‑TTGGCGCGCCGCGCCAAACGTAGCAGCAGTTTTCCACCGCTGCGGTCTgg                                          <  1:7844345/92‑1 (MQ=255)

                                                aacaacTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTgg                                          >  1:4533689/1‑93 (MQ=255)

                                                 acaacTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGa                                         <  2:2743375/93‑1 (MQ=255)

                                                   aacTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAg                                       >  2:1865205/1‑93 (MQ=255)

                                                      tGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGAt                                    >  2:2957367/1‑93 (MQ=255)

                                                         cGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTaa                                 >  2:878982/1‑93 (MQ=255)

                                                           cccACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGt                               <  2:3980800/93‑1 (MQ=255)

                                                            ccACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGtt                              >  2:6590401/1‑93 (MQ=255)

                                                            ccACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGtt                              >  2:734788/1‑93 (MQ=255)

                                                            ccACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGtt                              >  2:5426792/1‑93 (MQ=255)

                                                             cACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTg                             >  2:8172869/1‑93 (MQ=255)

                                                             cACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTg                             >  1:8411524/1‑93 (MQ=255)

                                                              aCTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGc                            <  1:5891413/93‑1 (MQ=255)

                                                              aCTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGc                            >  1:655224/1‑93 (MQ=255)

                                                              aCTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGc                            <  2:5826387/93‑1 (MQ=255)

                                                              aCTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGc                            <  1:8344515/93‑1 (MQ=255)

                                                               cTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGcc                           <  1:862405/93‑1 (MQ=255)

                                                               cTTTCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGcc                           <  1:8181056/93‑1 (MQ=255)

                                                                  tCTGGCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGga                        <  1:7596137/93‑1 (MQ=255)

                                                                     ggCGCGTTGTTGCAAGTTATGG‑TTGGCGAGAAACGCTAAACGTAGAAGAAGTTTTCCTCCGCTGCGGTCTGGAAGGATTAAGTTGCCGgatga                     <  1:2292111/93‑1 (MQ=255)

                                                                     ggCGCGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGgatga                     <  1:4289652/93‑1 (MQ=255)

                                                                      gcgcGTGGTGGCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGgatgat                    <  2:4278159/93‑1 (MQ=255)

                                                                             gtggCAAGTTATTG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCATCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAAcc             <  1:8711658/93‑1 (MQ=255)

                                                                                gCAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAAcctcc          >  1:1992313/1‑93 (MQ=255)

                                                                                 cAAGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAAcctcct         <  2:3507978/93‑1 (MQ=255)

                                                                                   aGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCcttc       >  2:6518234/1‑93 (MQ=255)

                                                                                   aGTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCcttc       >  1:4055116/1‑93 (MQ=255)

                                                                                    gTTATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCcttct      >  1:2549701/1‑93 (MQ=255)

                                                                                     ttATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCcttctt     >  2:3445478/1‑93 (MQ=255)

                                                                                      tATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCttt    <  2:5902203/93‑1 (MQ=255)

                                                                                      tATGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCttt    >  1:3511266/1‑93 (MQ=255)

                                                                                        tGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTTCCGGATGATGGAAACCTCCTTCTTTAt  >  1:5572785/1‑93 (MQ=255)

                                                                                        tGG‑TTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTAt  >  1:2982141/1‑93 (MQ=255)

GCACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGG‑TT‑GCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTAT  >  NC_000913/3930475‑3930654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTT‑GCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCAT  >  NC_000913/3930475‑3930661

GCACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTT‑G                                                                                               <  SRR4302541.6883135/94‑1 (MQ=60)

GCACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTT‑G                                                                                               <  SRR4302541.8119401/94‑1 (MQ=60)

  ACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTT‑Ggc                                                                                             >  SRR4302541.3361410/1‑92 (MQ=60)

  ACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTT‑Ggc                                                                                             <  SRR4302541.8143816/94‑3 (MQ=60)

    CGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGA                                                                                            >  SRR4302541.3507498/1‑94 (MQ=60)

    CGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGA                                                                                            >  SRR4302541.3453145/1‑94 (MQ=60)

    CGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGA                                                                                            <  SRR4302541.7346228/94‑1 (MQ=60)

    CGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATAGTTGGCGA                                                                                            >  SRR4302541.7803124/1‑94 (MQ=60)

     gaatgCGCTCCATATGTTCATAACGGCCTGCGTGTGCAGATTGAACAACTGTCGCCCCCTTTCGGGCGCGTGGTGGCAAGTTATGGTT‑Ggctag                                                                                          <  SRR4302541.932435/89‑6 (MQ=46)

     GAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGACCAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAG                                                                                           >  SRR4302541.378777/1‑94 (MQ=60)

     GAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAG                                                                                           >  SRR4302541.984403/1‑94 (MQ=60)

     GAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAG                                                                                           <  SRR4302541.932434/94‑1 (MQ=60)

     GAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAG                                                                                           >  SRR4302541.72190/1‑94 (MQ=60)

      AAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGA                                                                                          >  SRR4302541.7226332/1‑94 (MQ=60)

       AGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAA                                                                                         >  SRR4302541.4733958/1‑94 (MQ=60)

       AGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAA                                                                                         >  SRR4302541.5311688/1‑94 (MQ=60)

       AGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAA                                                                                         >  SRR4302541.8497934/1‑94 (MQ=60)

       AGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAA                                                                                         <  SRR4302541.8357725/94‑1 (MQ=60)

        GACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAA                                                                                        <  SRR4302541.1178535/94‑1 (MQ=60)

         tccgatcttgacattATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGCCAAGTTATGGTTGGCGAGAAAC                                                                                       <  SRR4302541.2064688/79‑1 (MQ=60)

         ACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGACGCCCGCTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAAC                                                                                       <  SRR4302541.2979120/94‑1 (MQ=60)

          cgctccagatggtgcTAACGGCCGTAGGGTACAGATTTGACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGCGAAACG                                                                                      <  SRR4302541.3607089/79‑1 (MQ=60)

          CGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACG                                                                                      >  SRR4302541.4918117/1‑94 (MQ=60)

          CGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACG                                                                                      <  SRR4302541.237265/94‑1 (MQ=60)

          CGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACG                                                                                      >  SRR4302541.8386427/1‑94 (MQ=60)

          CGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACG                                                                                      <  SRR4302541.3607090/94‑1 (MQ=60)

          CGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACG                                                                                      <  SRR4302541.1977919/94‑1 (MQ=60)

          CGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACG                                                                                      <  SRR4302541.6364973/94‑1 (MQ=60)

          CGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACG                                                                                      >  SRR4302541.2443737/1‑94 (MQ=60)

           GCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGC                                                                                     >  SRR4302541.1381494/1‑94 (MQ=60)

            CTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCC                                                                                    >  SRR4302541.438794/1‑94 (MQ=60)

            CTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCC                                                                                    >  SRR4302541.6606844/1‑94 (MQ=60)

            CTCCATATGTCCATAACGTCCATCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCC                                                                                    >  SRR4302541.3307681/1‑94 (MQ=60)

             TCCATGTGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCA                                                                                   >  SRR4302541.2862831/1‑94 (MQ=60)

             TCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCA                                                                                   >  SRR4302541.8210648/1‑94 (MQ=60)

             TCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCA                                                                                   <  SRR4302541.3998694/94‑1 (MQ=60)

              CCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAA                                                                                  >  SRR4302541.7324343/1‑94 (MQ=60)

              CCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAA                                                                                  >  SRR4302541.2132978/1‑94 (MQ=60)

               CATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAA                                                                                 >  SRR4302541.5432627/1‑94 (MQ=60)

                ATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTTGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAAC                                                                                >  SRR4302541.7193441/1‑94 (MQ=60)

                ATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAAC                                                                                <  SRR4302541.159935/94‑1 (MQ=60)

                ATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAAC                                                                                <  SRR4302541.8240058/94‑1 (MQ=60)

                 TATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCACACG                                                                               >  SRR4302541.4852638/1‑94 (MQ=60)

                 TATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACG                                                                               <  SRR4302541.4156496/94‑1 (MQ=60)

                 TATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACG                                                                               >  SRR4302541.8683544/1‑94 (MQ=60)

                  ATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGT                                                                              <  SRR4302541.1790939/94‑1 (MQ=60)

                    GTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAG                                                                            >  SRR4302541.3993763/1‑94 (MQ=60)

                    GTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAG                                                                            >  SRR4302541.2048807/1‑94 (MQ=60)

                    GTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAG                                                                            >  SRR4302541.2036629/1‑94 (MQ=60)

                    GTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGCCAAGTTATGGTT‑Ggggagaacgccaaaacgaaa                                                                           >  SRR4302541.2862679/1‑74 (MQ=60)

                     TCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGA                                                                           >  SRR4302541.6010336/1‑94 (MQ=60)

                     TCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGA                                                                           >  SRR4302541.2349925/1‑94 (MQ=60)

                     TCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGA                                                                           >  SRR4302541.3091656/1‑94 (MQ=60)

                      CCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAA                                                                          >  SRR4302541.6788047/1‑94 (MQ=60)

                       CATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAG                                                                         >  SRR4302541.3031561/1‑94 (MQ=60)

                        ATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGA                                                                        <  SRR4302541.2352376/94‑1 (MQ=60)

                        ATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGA                                                                        <  SRR4302541.3597038/94‑1 (MQ=60)

                        ATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGA                                                                        <  SRR4302541.7220499/94‑1 (MQ=60)

                        ATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGA                                                                        <  SRR4302541.8916814/94‑1 (MQ=60)

                         TAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAA                                                                       >  SRR4302541.5805302/1‑94 (MQ=60)

                         TAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAA                                                                       <  SRR4302541.1238687/94‑1 (MQ=60)

                          AACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTATAAGAAG                                                                      >  SRR4302541.5498953/1‑94 (MQ=60)

                          AACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAG                                                                      <  SRR4302541.3267687/94‑1 (MQ=60)

                          AACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAG                                                                      >  SRR4302541.1549963/1‑94 (MQ=60)

                          AACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAG                                                                      >  SRR4302541.4912778/1‑94 (MQ=60)

                          AACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAG                                                                      >  SRR4302541.2434355/1‑94 (MQ=60)

                          AACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAG                                                                      >  SRR4302541.2670683/1‑94 (MQ=60)

                           ACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGT                                                                     <  SRR4302541.5033127/94‑1 (MQ=60)

                           ACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGT                                                                     <  SRR4302541.1939936/94‑1 (MQ=60)

                           ACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTATGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGT                                                                     >  SRR4302541.1477980/1‑94 (MQ=60)

                            CGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTT                                                                    <  SRR4302541.6048612/94‑1 (MQ=60)

                            CGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTT                                                                    >  SRR4302541.2771844/1‑94 (MQ=60)

                            CGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTT                                                                    >  SRR4302541.6417646/1‑94 (MQ=60)

                             GTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTT                                                                   >  SRR4302541.2403369/1‑94 (MQ=60)

                             GTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTT                                                                   >  SRR4302541.1255723/1‑94 (MQ=60)

                             GTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTT                                                                   <  SRR4302541.6910948/94‑1 (MQ=60)

                               CCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTC                                                                 <  SRR4302541.8327565/94‑1 (MQ=60)

                                CGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCC                                                                >  SRR4302541.6061626/1‑94 (MQ=60)

                                 GTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCA                                                               <  SRR4302541.365380/94‑1 (MQ=60)

                                 GTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCA                                                               <  SRR4302541.2966604/94‑1 (MQ=60)

                                   CGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACC                                                             >  SRR4302541.4128297/1‑94 (MQ=60)

                                   CGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACC                                                             >  SRR4302541.6272612/1‑94 (MQ=60)

                                   CGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACC                                                             >  SRR4302541.6272614/1‑94 (MQ=60)

                                    GGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCG                                                            >  SRR4302541.1023413/1‑94 (MQ=60)

                                    GGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCG                                                            <  SRR4302541.2655751/94‑1 (MQ=60)

                                     GGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGC                                                           >  SRR4302541.2670501/1‑94 (MQ=60)

                                     GGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGC                                                           >  SRR4302541.7699911/1‑94 (MQ=60)

                                     GGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGC                                                           <  SRR4302541.1096520/94‑1 (MQ=60)

                                      GTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCT                                                          >  SRR4302541.6841342/1‑94 (MQ=60)

                                      GTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCT                                                          <  SRR4302541.5846310/94‑1 (MQ=60)

                                      GTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCT                                                          >  SRR4302541.4924614/1‑94 (MQ=60)

                                      GTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCT                                                          >  SRR4302541.8015201/1‑94 (MQ=60)

                                      GTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCT                                                          <  SRR4302541.3952213/94‑1 (MQ=60)

                                       TACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTG                                                         >  SRR4302541.4271205/1‑94 (MQ=60)

                                        ACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGC                                                        <  SRR4302541.841602/94‑1 (MQ=60)

                                         CAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCG                                                       <  SRR4302541.579209/94‑1 (MQ=60)

                                         CAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCG                                                       >  SRR4302541.2614724/1‑94 (MQ=60)

                                         CAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCG                                                       <  SRR4302541.951794/94‑1 (MQ=60)

                                           GATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGT                                                     <  SRR4302541.8509701/94‑1 (MQ=60)

                                           GATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGC                                                     >  SRR4302541.4168210/1‑94 (MQ=60)

                                            ATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTC                                                    <  SRR4302541.8743648/94‑1 (MQ=60)

                                            ATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTC                                                    >  SRR4302541.3504631/1‑94 (MQ=60)

                                            ATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTC                                                    <  SRR4302541.6714180/94‑1 (MQ=60)

                                            ATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTC                                                    <  SRR4302541.4532880/94‑1 (MQ=60)

                                             TTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCT                                                   <  SRR4302541.5966816/94‑1 (MQ=60)

                                             TTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCT                                                   <  SRR4302541.8623491/94‑1 (MQ=60)

                                             TTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCT                                                   <  SRR4302541.6122831/94‑1 (MQ=60)

                                             TTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCT                                                   <  SRR4302541.6171717/94‑1 (MQ=60)

                                              TGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTG                                                  >  SRR4302541.5769242/1‑94 (MQ=60)

                                              TGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTG                                                  <  SRR4302541.5665411/94‑1 (MQ=60)

                                               GAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGG                                                 >  SRR4302541.8130752/1‑94 (MQ=60)

                                               GAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGG                                                 >  SRR4302541.4579488/1‑94 (MQ=60)

                                                AACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGACACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGA                                                >  SRR4302541.7824222/1‑94 (MQ=60)

                                                AACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGA                                                >  SRR4302541.5325321/1‑94 (MQ=60)

                                                AACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGA                                                >  SRR4302541.8537433/1‑94 (MQ=60)

                                                  CAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAG                                              <  SRR4302541.8225156/94‑1 (MQ=60)

                                                     CTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGAT                                           <  SRR4302541.7935759/94‑1 (MQ=60)

                                                      TGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATT                                          <  SRR4302541.8126515/94‑1 (MQ=60)

                                                      TGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATT                                          >  SRR4302541.8792896/1‑94 (MQ=60)

                                                      TGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATT                                          >  SRR4302541.8695003/1‑94 (MQ=60)

                                                       GTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTA                                         <  SRR4302541.5611421/94‑1 (MQ=60)

                                                       GTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTA                                         <  SRR4302541.6451786/94‑1 (MQ=60)

                                                       GTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTA                                         <  SRR4302541.1174370/94‑1 (MQ=60)

                                                         CGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGTGGTCTGGAAGGATTAAG                                       <  SRR4302541.4326476/94‑1 (MQ=60)

                                                         CGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAG                                       <  SRR4302541.89446/94‑1 (MQ=60)

                                                         CGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAG                                       <  SRR4302541.1743365/94‑1 (MQ=60)

                                                          GCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGT                                      >  SRR4302541.8434832/1‑94 (MQ=60)

                                                          GCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGT                                      <  SRR4302541.757595/94‑1 (MQ=60)

                                                            CCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTG                                    >  SRR4302541.8502490/1‑94 (MQ=60)

                                                            CCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTG                                    >  SRR4302541.2032251/1‑94 (MQ=60)

                                                            CCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTG                                    >  SRR4302541.580181/1‑94 (MQ=60)

                                                             CACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCTCCGCTGCGGTCTGGAAGGATTAAGTTGC                                   <  SRR4302541.6065821/94‑1 (MQ=60)

                                                             CACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGC                                   >  SRR4302541.661405/1‑94 (MQ=60)

                                                              GCTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCC                                  <  SRR4302541.8435096/94‑1 (MQ=60)

                                                              ACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCC                                  <  SRR4302541.8435095/94‑1 (MQ=60)

                                                              ACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCC                                  <  SRR4302541.5951362/94‑1 (MQ=60)

                                                               CTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCG                                 >  SRR4302541.1243205/1‑94 (MQ=60)

                                                               CTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCG                                 <  SRR4302541.870242/94‑1 (MQ=60)

                                                               CTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCG                                 >  SRR4302541.3378596/1‑94 (MQ=60)

                                                               CTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCG                                 <  SRR4302541.8270377/94‑1 (MQ=60)

                                                                TTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGG                                <  SRR4302541.3204576/94‑1 (MQ=60)

                                                                TTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGG                                <  SRR4302541.7341696/94‑1 (MQ=60)

                                                                  TCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGAT                              <  SRR4302541.7677291/94‑1 (MQ=60)

                                                                  TCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGAT                              >  SRR4302541.7213810/1‑94 (MQ=60)

                                                                  TCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGAT                              <  SRR4302541.8387192/94‑1 (MQ=60)

                                                                     GGCGCGTTGTTGCAAGTTATGGTTGGCGAGAAACGCTAAACGTAGAAGAAGTTTTCCTCCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGAT                           <  SRR4302541.2314319/94‑1 (MQ=60)

                                                                     GGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGAT                           >  SRR4302541.7585071/1‑94 (MQ=60)

                                                                     GGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGAT                           <  SRR4302541.4332513/94‑1 (MQ=60)

                                                                      GCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATG                          <  SRR4302541.8836043/94‑1 (MQ=60)

                                                                        GCGTGGTGGCAATTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGA                        <  SRR4302541.1519383/94‑1 (MQ=60)

                                                                        GCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGA                        <  SRR4302541.8136130/94‑1 (MQ=60)

                                                                        GCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGA                        <  SRR4302541.68879/94‑1 (MQ=60)

                                                                         CGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGTGGTCTGGAAGGATTAAGTTGCCGGATGATGGAA                       >  SRR4302541.8194810/1‑94 (MQ=60)

                                                                         CGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAA                       >  SRR4302541.8754483/1‑94 (MQ=60)

                                                                         CGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAA                       <  SRR4302541.5257890/94‑1 (MQ=60)

                                                                          GTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAA                      >  SRR4302541.176207/1‑94 (MQ=60)

                                                                          GTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAA                      >  SRR4302541.7324901/1‑94 (MQ=60)

                                                                           TGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAAC                     >  SRR4302541.8166540/1‑94 (MQ=60)

                                                                           TGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAAC                     <  SRR4302541.4359479/94‑1 (MQ=60)

                                                                            GGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACC                    <  SRR4302541.628405/94‑1 (MQ=60)

                                                                            GGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACC                    <  SRR4302541.4842169/94‑1 (MQ=60)

                                                                             GTGGCAAGTTATTGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCATCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCT                   <  SRR4302541.8804860/94‑1 (MQ=60)

                                                                             GTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCT                   <  SRR4302541.1001038/94‑1 (MQ=60)

                                                                             GTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCT                   <  SRR4302541.8263115/94‑1 (MQ=60)

                                                                             GTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCT                   <  SRR4302541.3450482/94‑1 (MQ=60)

                                                                             GTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCT                   <  SRR4302541.1504057/94‑1 (MQ=60)

                                                                               GGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCC                 >  SRR4302541.6596241/1‑94 (MQ=60)

                                                                               GGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCC                 >  SRR4302541.4282942/1‑94 (MQ=60)

                                                                               GGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCC                 >  SRR4302541.2011586/1‑94 (MQ=60)

                                                                                 CAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTTCCGGATGATGGAAACCTCCTT               >  SRR4302541.1215108/1‑94 (MQ=60)

                                                                                 CAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTT               <  SRR4302541.1950437/94‑1 (MQ=60)

                                                                                 CAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTT               <  SRR4302541.3407300/94‑1 (MQ=60)

                                                                                 CAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTT               <  SRR4302541.6596619/94‑1 (MQ=60)

                                                                                  AAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTC              >  SRR4302541.4095126/1‑94 (MQ=60)

                                                                                   AGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCT             >  SRR4302541.2575274/1‑94 (MQ=60)

                                                                                    GTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTT            <  SRR4302541.2231842/94‑1 (MQ=60)

                                                                                     TTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTT           >  SRR4302541.8712498/1‑94 (MQ=60)

                                                                                     TTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTT           >  SRR4302541.3546557/1‑94 (MQ=60)

                                                                                       ATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTTCCGGATGATGGAAACCTCCTTCTTTAT         <  SRR4302541.2593746/94‑1 (MQ=60)

                                                                                       ATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTTCCGGATGATGGAAACCTCCTTCTTTAT         >  SRR4302541.5629835/1‑94 (MQ=60)

                                                                                       ATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTAT         >  SRR4302541.3012223/1‑94 (MQ=60)

                                                                                        TGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATG        >  SRR4302541.5128214/1‑94 (MQ=60)

                                                                                        TGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATG        >  SRR4302541.6871017/1‑94 (MQ=60)

                                                                                          GTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTC      <  SRR4302541.3663263/94‑1 (MQ=60)

                                                                                          GTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTATGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTC      <  SRR4302541.136280/94‑1 (MQ=60)

                                                                                           ttgGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCG     <  SRR4302541.3048841/91‑1 (MQ=60)

                                                                                            G‑GCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCA   >  SRR4302541.5094088/1‑94 (MQ=60)

                                                                                              GCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCAT  <  SRR4302541.4233640/94‑1 (MQ=60)

                                                                                              GCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCAT  <  SRR4302541.1667743/94‑1 (MQ=60)

GCACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTT‑GCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCAT  >  NC_000913/3930475‑3930661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`