Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,951,168	+G	coding (37/1818 nt)	ilvD →	dihydroxyacid dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,951,168	1	.	G	100.0%	908.8 / NA	269	P13A (CCC→GCC)	ilvD	dihydroxyacid dehydratase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (34/235); total (34/235)

Only 100 of 333 total aligned reads displayed.

GGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GG‑GC‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951087‑3951248

ggAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGaa                                                                         <  2:8353741/93‑1 (MQ=255)

   gTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGa                                                                      <  1:5228743/93‑1 (MQ=255)

   gTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGa                                                                      <  1:2399783/93‑1 (MQ=255)

    taaataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGAc                                                                     <  1:4268396/93‑1 (MQ=255)

      aataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCg                                                                   <  2:707946/93‑1 (MQ=255)

       ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGa                                                                  <  2:3976302/93‑1 (MQ=255)

       ataaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGa                                                                  <  1:8442327/93‑1 (MQ=255)

        taaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGAc                                                                 <  2:2964924/93‑1 (MQ=255)

         aaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACg                                                                <  2:549121/93‑1 (MQ=255)

         aaaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACg                                                                <  1:7427169/93‑1 (MQ=255)

          aaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGc                                                               <  2:2760477/93‑1 (MQ=255)

          aaGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGGGCGG‑TGGG‑GCGC‑‑CCCCCGAAAGACCGACGc                                                               >  1:1230590/1‑93 (MQ=255)

           aGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGcc                                                              <  1:6445284/93‑1 (MQ=255)

             tATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGa                                                            <  1:1922482/93‑1 (MQ=255)

             tATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGa                                                            <  2:3270992/93‑1 (MQ=255)

              aTGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGAt                                                           <  1:6929981/93‑1 (MQ=255)

              aTGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTCCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGAt                                                           <  1:3342951/93‑1 (MQ=255)

               tGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGAtt                                                          <  2:672872/93‑1 (MQ=255)

               tGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGAtt                                                          <  1:4820114/93‑1 (MQ=255)

                gCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTG‑T‑GGCGCGC‑‑CACCCGGAAGACCGCCGCCCAttt                                                         >  1:4740756/1‑93 (MQ=255)

                  cTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCg                                                       <  2:7913348/93‑1 (MQ=255)

                  cTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCg                                                       <  1:2793549/93‑1 (MQ=255)

                   tAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCgg                                                      <  2:372047/93‑1 (MQ=255)

                    aaGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGt                                                     <  1:6370299/93‑1 (MQ=255)

                    aaGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑TGGG‑GCGC‑‑CCCCCGGATGACCGACGCCGCtttttgt                                                     >  2:486522/1‑89 (MQ=255)

                     aGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTG‑T‑GGCGCGC‑‑CACCCGGAAGACCGACGCCGCTTTTGGTa                                                    >  2:120305/1‑93 (MQ=255)

                      ntNCCCTNCCGCCACCACCACNCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTaa                                                   <  1:7606667/92‑1 (MQ=255)

                       tACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCCG‑TGGG‑GCGC‑‑CACCGGGAGGAACCGCGCCCATTTCGGTGAg                                                  >  1:3766200/1‑93 (MQ=255)

                        aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGc                                                 <  2:7781982/93‑1 (MQ=255)

                        aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGc                                                 <  2:6063836/93‑1 (MQ=255)

                        aCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGc                                                 <  2:1340145/93‑1 (MQ=255)

                         cctttCCGCCACCACCACTCAGGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGcc                                                <  1:3503823/90‑1 (MQ=255)

                           gTTCCGCCACCACCACTCATGGTCGTCATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGa                                              <  1:7493753/93‑1 (MQ=255)

                           gTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑T‑GGCGCGC‑‑CGCCCGGATGACCGACGCCGAGTTCGGTAAGCCgc                                              >  2:5672138/1‑92 (MQ=255)

                            ttCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCCGGAAGACCAACCCCGAGTTCTGTAAGCCgct                                             >  2:8111373/1‑91 (MQ=255)

                             tCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGAtt                                            <  1:7453823/93‑1 (MQ=255)

                             tCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTG‑G‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCAGAtt                                            >  2:1125203/1‑93 (MQ=255)

                             tCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCGCGCGGGCCG‑T‑GGCGCGC‑‑CACCCGCATGAGCGACGCCGCTTTCCGTAAGCCGact                                            >  1:6540958/1‑91 (MQ=255)

                               cGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCCG‑T‑GGCGCGG‑‑CCCCGGGATGAACGACGCCCACTTTGGGAAGCCGATTAt                                          >  2:14211/1‑93 (MQ=255)

                                gCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATc                                         <  2:4920437/93‑1 (MQ=255)

                                 ccaccaccaCTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATcg                                        <  2:5125820/93‑1 (MQ=255)

                                 ccaccaccaCTCATGGTCGTAATATGGCGGGGGCTCGTGGGCCG‑G‑GGCGCGC‑‑CCCCCGAATGACCGCCCCCGCGTTCGGTAAGCCGATTCTcg                                        >  2:7236671/1‑93 (MQ=255)

                                  caccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATcgc                                       <  2:745209/93‑1 (MQ=255)

                                  caccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATcgc                                       <  1:889325/93‑1 (MQ=255)

                                   accaccacTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCCGGATGACCGACGCCGCCTTTGGTAAGCCGATTATtgcg                                      >  2:4575365/1‑93 (MQ=255)

                                    ccaccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCCG‑G‑GG‑GG‑CGGCCCCGGAATGACCGACCCCGATTTTGGTAACACGATTATCGCgg                                     >  2:6641923/1‑93 (MQ=255)

                                     caccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGt                                    <  1:8728352/93‑1 (MQ=255)

                                      cccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGtt                                   <  1:2976481/92‑1 (MQ=255)

                                      accacTCATGGTCGTAATATGGCGGGGGCTCGTGCGCCG‑TGGG‑GCGC‑‑CACCCGGATGACCGACGCCGATTTCGGTAAAGCGATTATCGCGGtg                                   >  2:2631452/1‑92 (MQ=255)

                                      accacTCATGGTCGTAATATGGCGGGGGCTCCTGCGCTG‑TGGG‑GCGC‑‑CCCCGGGAAGAACGACCCCGCTTTTCGTAAGCCGGTTATCTCGGtt                                   >  2:3105742/1‑93 (MQ=255)

                                       ccacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTtg                                  <  2:1916727/93‑1 (MQ=255)

                                        cacTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTtgt                                 <  1:1767178/93‑1 (MQ=255)

                                         ccTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTtgtg                                <  2:1823636/92‑1 (MQ=255)

                                         acTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTtgtg                                <  2:231875/93‑1 (MQ=255)

                                           tCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGaa                              <  1:7080963/93‑1 (MQ=255)

                                            cATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAAc                             <  2:2877294/93‑1 (MQ=255)

                                            cATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAAc                             <  1:4647561/93‑1 (MQ=255)

                                             gtGGGCGTAAGATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACt                            <  2:6849934/92‑1 (MQ=255)

                                              tGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTc                           <  2:4295845/93‑1 (MQ=255)

                                              tGGTCGTAATAGGGCGGGTGCTCGTGCGCTG‑TGGG‑GCGC‑‑CCCCGGGATGACCGACCCCGATTTCGGGAAGCCGATTATCCGGGGTGTGAACTc                           >  2:8688110/1‑93 (MQ=255)

                                                 tCGTAATATGGCGGGGGCTCGTGCGCTG‑TGGG‑GCGC‑‑CCCCCGGATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGGTGGGGACTCGtt                        >  2:6489810/1‑93 (MQ=255)

                                                   gTAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCa                      <  1:3816881/93‑1 (MQ=255)

                                                   gTAATATGGCGGGGGGTCGGGCGCCG‑G‑GGCGCGC‑‑CCCCCGGATGACCGACGCCGATTTCGGTAAGACCATTATTGCGGTTGTGAACTCGtttc                      >  2:7190197/1‑91 (MQ=255)

                                                    tAATATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAc                     <  1:8170906/93‑1 (MQ=255)

                                                     aaTATGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAcc                    <  1:7232980/93‑1 (MQ=255)

                                                      atatGGCGGGTGCTCGTGCGCTGTT‑GC‑GCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                   <  1:2256608/93‑1 (MQ=255)

                                                      atatGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                   <  2:2422769/93‑1 (MQ=255)

                                                      atatGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                   <  1:839566/93‑1 (MQ=255)

                                                      atatGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAccc                   <  1:2510092/93‑1 (MQ=255)

                                                       tatGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCa                  <  1:5685382/93‑1 (MQ=255)

                                                       tatGGCGGGGGGTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGGTTATCTCGGTTGTGAAATCGTTTAcaca                  >  2:4076753/1‑93 (MQ=255)

                                                        atGGCGCGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGAAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAGCTCGTTTActaaa                 <  2:1571545/93‑5 (MQ=255)

                                                         tGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  1:6992105/93‑1 (MQ=255)

                                                         tGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  1:3982347/93‑1 (MQ=255)

                                                         tGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  1:4423799/93‑1 (MQ=255)

                                                         tGGCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAt                <  1:3010891/93‑1 (MQ=255)

                                                          ggCGGGTGGTCGTGCGTTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               <  1:2053369/93‑1 (MQ=255)

                                                          ggCGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAtt               <  1:5261609/93‑1 (MQ=255)

                                                            cGGGTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTg             <  1:3115641/93‑1 (MQ=255)

                                                             gggTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGt            >  2:8416694/1‑93 (MQ=255)

                                                              ggTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTa           <  1:1006597/93‑1 (MQ=255)

                                                               gTGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAc          <  2:460259/93‑1 (MQ=255)

                                                                tGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         <  2:6194654/93‑1 (MQ=255)

                                                                tGCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAcc         <  2:1485965/93‑1 (MQ=255)

                                                                 gCTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCg        >  1:1098046/1‑93 (MQ=255)

                                                                  cTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCgg       <  1:6159538/93‑1 (MQ=255)

                                                                  cTCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCgg       <  2:3607790/93‑1 (MQ=255)

                                                                   tCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      >  2:2820902/1‑93 (MQ=255)

                                                                   tCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      >  1:1616910/1‑93 (MQ=255)

                                                                   tCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      >  2:7013538/1‑93 (MQ=255)

                                                                   tCGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCggg      <  2:6352244/93‑1 (MQ=255)

                                                                    cGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     <  1:49587/93‑1 (MQ=255)

                                                                    cGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     <  1:601831/93‑1 (MQ=255)

                                                                    cGTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGt     <  2:4049779/93‑1 (MQ=255)

                                                                     gTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    <  1:4517674/93‑1 (MQ=255)

                                                                     gTGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTc    >  2:3384088/1‑93 (MQ=255)

                                                                      tGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa   >  2:3749203/1‑93 (MQ=255)

                                                                      tGCGCTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCa   <  2:1754783/93‑1 (MQ=255)

                                                                       gcgcTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  <  2:7390793/93‑1 (MQ=255)

                                                                       gcgcTG‑T‑GGCGCGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCACGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAc  >  1:7938891/1‑93 (MQ=255)

GGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑GG‑GC‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC  >  NC_000913/3951087‑3951248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑G‑‑‑G‑‑C‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTGCGCG  >  NC_000913/3951075‑3951261

AGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTG‑T‑‑‑G‑‑G‑‑‑G‑‑G                                                                                                  >  SRR4302541.2747737/1‑94 (MQ=60)

          TGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGCGGGCTG‑T‑‑‑G‑‑G‑‑‑GGCG‑C‑‑CACCGGA                                                                                       >  SRR4302541.4507016/1‑94 (MQ=60)

            GGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAAT                                                                                     <  SRR4302541.2012110/94‑1 (MQ=60)

            GGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAAT                                                                                     <  SRR4302541.7190176/94‑1 (MQ=60)

               GTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGAC                                                                                  <  SRR4302541.2423306/94‑1 (MQ=60)

               GTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGAC                                                                                  <  SRR4302541.5282619/94‑1 (MQ=60)

                TAAATAAAGTATGCCTGAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACC                                                                                 <  SRR4302541.2281641/94‑1 (MQ=60)

                TAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACC                                                                                 <  SRR4302541.4311052/94‑1 (MQ=60)

                TAAATAAAGTATGCCTAAGTACCGTTCCGCATCCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACC                                                                                 <  SRR4302541.2209586/94‑1 (MQ=60)

                   ATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGAC                                                                              <  SRR4302541.3918117/94‑1 (MQ=60)

                   ATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGAC                                                                              <  SRR4302541.6227802/94‑1 (MQ=60)

                   ATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGAC                                                                              <  SRR4302541.3059/94‑1 (MQ=60)

                   ATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGAC                                                                              <  SRR4302541.8533500/94‑1 (MQ=60)

                     AAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGC                                                                            <  SRR4302541.7224601/94‑1 (MQ=60)

                     AAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGC                                                                            <  SRR4302541.7506572/94‑1 (MQ=60)

                      AAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCC                                                                           <  SRR4302541.2561818/94‑1 (MQ=60)

                       AGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCG                                                                          <  SRR4302541.3849674/94‑1 (MQ=60)

                       AGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCG                                                                          <  SRR4302541.6510973/94‑1 (MQ=60)

                        GTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGA                                                                         <  SRR4302541.4856828/94‑1 (MQ=60)

                         TATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGAT                                                                        <  SRR4302541.7606586/94‑1 (MQ=60)

                         TATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGAT                                                                        <  SRR4302541.46233/94‑1 (MQ=60)

                         TATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGAT                                                                        <  SRR4302541.1940988/94‑1 (MQ=60)

                          ATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATT                                                                       <  SRR4302541.7003931/94‑1 (MQ=60)

                          ATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATT                                                                       <  SRR4302541.484767/94‑1 (MQ=60)

                          ATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTCCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATT                                                                       <  SRR4302541.3376381/94‑1 (MQ=60)

                           TGCCTAAGTGCCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTT                                                                      <  SRR4302541.553349/94‑1 (MQ=60)

                           TGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTT                                                                      <  SRR4302541.5325165/94‑1 (MQ=60)

                           TGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTT                                                                      <  SRR4302541.4869253/94‑1 (MQ=60)

                              CTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGG                                                                   <  SRR4302541.2821772/94‑1 (MQ=60)

                               caagtccccTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCTGAATGACCGACGCCGATTTCGGT                                                                  <  SRR4302541.3019377/85‑1 (MQ=60)

                                AAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTA                                                                 <  SRR4302541.4668243/94‑1 (MQ=60)

                                AAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTA                                                                 <  SRR4302541.6435409/94‑1 (MQ=60)

                                AAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCCG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCCGGATGACCGACGCCGCTTTCGGTA                                                                 >  SRR4302541.5307550/1‑94 (MQ=60)

                                 AGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAA                                                                <  SRR4302541.8916066/94‑1 (MQ=60)

                                 AGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAA                                                                <  SRR4302541.6157811/94‑1 (MQ=60)

                                 AGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAA                                                                <  SRR4302541.8916065/94‑1 (MQ=60)

                                  NTNCCCTNCCGCCACCACCACNCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAG                                                               <  SRR4302541.7687944/94‑1 (MQ=60)

                                  GTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAG                                                               <  SRR4302541.4045708/94‑1 (MQ=60)

                                  GTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAG                                                               <  SRR4302541.4251417/94‑1 (MQ=60)

                                  GTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAG                                                               <  SRR4302541.6849127/94‑1 (MQ=60)

                                  GTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAG                                                               <  SRR4302541.70349/94‑1 (MQ=60)

                                   TACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGC                                                              <  SRR4302541.619162/94‑1 (MQ=60)

                                    ACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCC                                                             <  SRR4302541.7122055/94‑1 (MQ=60)

                                    ACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCC                                                             <  SRR4302541.103894/94‑1 (MQ=60)

                                    ACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCC                                                             <  SRR4302541.6510430/94‑1 (MQ=60)

                                     CCTTTCCGCCACCACCACTCAGGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCG                                                            <  SRR4302541.3539002/94‑1 (MQ=60)

                                     CCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCG                                                            <  SRR4302541.1758395/94‑1 (MQ=60)

                                     CCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCG                                                            <  SRR4302541.787191/94‑1 (MQ=60)

                                      CGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑TGGGG‑‑G‑‑‑G‑‑C‑C‑‑CCCCGGAA‑GAACGACGCCGCTTTCGGGAAGCCGA                                                           >  SRR4302541.1952101/1‑94 (MQ=55)

                                       GTTCCGCCACCACCACTCATGGTCGTCATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGAT                                                          <  SRR4302541.7573880/94‑1 (MQ=60)

                                       GTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGAT                                                          <  SRR4302541.6255411/94‑1 (MQ=60)

                                         TCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTA                                                        <  SRR4302541.7533429/94‑1 (MQ=60)

                                         TCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTA                                                        <  SRR4302541.3269643/94‑1 (MQ=60)

                                         TCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGGGCGCTG‑T‑‑‑G‑‑G‑‑‑GGCG‑C‑‑CACCGGGATGACCGGCGCCGATTTCGGgaaggcgagtt                                                        >  SRR4302541.65876/1‑83 (MQ=44)

                                           CGCCACCACCACTCATGGTCGTAATATGGCGGGTGGTCGTGCGCTG‑T‑‑‑G‑‑GCGCG‑‑C‑C‑‑C‑CCCGAATGACCGACGCCCCTTTCGGTAAGCCGCTTTTC                                                      >  SRR4302541.6922683/1‑94 (MQ=53)

                                           CGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGCTG‑G‑‑‑G‑‑G‑‑‑G‑‑G‑CGGCACCGGAATGACACACGCCGCTTTCGGTAAGCCCACTATC                                                      >  SRR4302541.2528803/1‑94 (MQ=38)

                                            GCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCG                                                     <  SRR4302541.8332014/94‑1 (MQ=60)

                                            GCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCG                                                     <  SRR4302541.3740273/94‑1 (MQ=60)

                                             cgcCCACCATTCAGGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGC                                                    <  SRR4302541.6854828/91‑1 (MQ=60)

                                             CCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGC                                                    <  SRR4302541.4156302/94‑1 (MQ=60)

                                             CCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑T‑‑‑G‑‑GGGCG‑‑C‑C‑‑C‑CCGGAATGACCGACGCCGCTTTCGGGAAGCCCATTATCGC                                                    >  SRR4302541.487468/1‑94 (MQ=60)

                                              CACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCG                                                   <  SRR4302541.6449771/94‑1 (MQ=60)

                                              CACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCG                                                   <  SRR4302541.897485/94‑1 (MQ=60)

                                              CACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGGATGAACGGCGCCCATTTCGGTAAGGCCAATATCGCG                                                   >  SRR4302541.3661826/1‑94 (MQ=26)

                                              CACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGCAAGACCGCAGCCGATTTTGGTAAGCCGATTATCCCG                                                   >  SRR4302541.4876382/1‑94 (MQ=44)

                                              CACCACCAATCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCG                                                   <  SRR4302541.5362045/94‑1 (MQ=60)

                                               ACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCCGGATGACCGACGCCCATTTCGGTAAACCGATTATCTCGG                                                  >  SRR4302541.5617436/1‑94 (MQ=53)

                                                CCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGT                                                 <  SRR4302541.5047659/94‑1 (MQ=60)

                                                 CACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTT                                                <  SRR4302541.8821800/94‑1 (MQ=60)

                                                 CACCACTCATGGTCGTAATATGGCGGGGGCTCCTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGAACGACGCCGATTTCGGGAAGCCGATTATCGCGGGT                                                >  SRR4302541.3823447/1‑94 (MQ=60)

                                                  CCCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTG                                               <  SRR4302541.3006486/94‑1 (MQ=60)

                                                  CCCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTG                                               <  SRR4302541.7565546/94‑1 (MQ=60)

                                                  CCCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTG                                               <  SRR4302541.445598/94‑1 (MQ=60)

                                                    CACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTG                                             <  SRR4302541.7317659/94‑1 (MQ=60)

                                                    CACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTG                                             <  SRR4302541.7458195/94‑1 (MQ=60)

                                                    CACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTG                                             <  SRR4302541.8585140/94‑1 (MQ=60)

                                                    CACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTG                                             <  SRR4302541.1784364/94‑1 (MQ=60)

                                                     ACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTG‑T‑‑‑G‑‑GCGCG‑‑C‑C‑‑C‑CCGGAATGACCGACGCCGATTTTGGGTAGCCGATTATTGCGGGTGTGA                                            >  SRR4302541.3956075/1‑94 (MQ=34)

                                                     ACTCATGGTCGTAATATGGCGGGGGCTCGTGCGCCG‑T‑‑‑G‑‑GCGCG‑‑C‑C‑‑C‑CCGGAATGACCCACGCCGCATTTGGTGAGCCGATTATCGCGGGTGTGA                                            >  SRR4302541.7039465/1‑94 (MQ=25)

                                                     ACTCATGGTCGTAATATGGCGGGGGCTCGCGCGCTG‑TGGCG‑‑G‑‑‑G‑‑C‑C‑‑CCCCGG‑ATGACCCACCCCGATTTCGGGAAGCCGAatttccgcgttgtga                                            >  SRR4302541.2063508/1‑79 (MQ=18)

                                                      CTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAA                                           <  SRR4302541.1726295/94‑1 (MQ=60)

                                                       TCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GGGCG‑‑C‑C‑‑C‑CCGGAAAGAACGACCCCGATTTCGGTAAGCCGATTATCtccggtgtggaa                                          >  SRR4302541.7688865/1‑82 (MQ=57)

                                                       TCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GCTCG‑‑‑‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAAC                                          <  SRR4302541.4521362/94‑1 (MQ=60)

                                                       TCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAAC                                          <  SRR4302541.7156280/94‑1 (MQ=60)

                                                       TCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAAC                                          <  SRR4302541.4366324/94‑1 (MQ=60)

                                                       TCATGGTCGTAATATGGCGGGGGCTCGTGCGCTG‑T‑‑‑G‑‑G‑‑‑GGCG‑C‑‑CACCCGGATGACCGACGCCGCTTTCGGTAAGCCGCTTATTGCGGTTGTGAAC                                          >  SRR4302541.2789442/1‑94 (MQ=53)

                                                        CATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACT                                         <  SRR4302541.4694889/94‑1 (MQ=60)

                                                        CATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACT                                         <  SRR4302541.1740113/94‑1 (MQ=60)

                                                        CATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACT                                         <  SRR4302541.8641162/94‑1 (MQ=60)

                                                         ATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTC                                        <  SRR4302541.3436814/94‑1 (MQ=60)

                                                         ATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTC                                        <  SRR4302541.4908766/94‑1 (MQ=60)

                                                          TGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCG                                       <  SRR4302541.459325/94‑1 (MQ=60)

                                                          TGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCG                                       <  SRR4302541.7095436/94‑1 (MQ=60)

                                                           GGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGT                                      <  SRR4302541.295347/94‑1 (MQ=60)

                                                           GGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACACCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGT                                      <  SRR4302541.8792259/94‑1 (MQ=60)

                                                           GGTCGTAATATGGCGGGGGCTCGTGGGCCG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCCGTTGTGAAATCGT                                      >  SRR4302541.1240529/1‑94 (MQ=60)

                                                           GGTCGTAATATGGCGGGGGCTCGTGCGCTG‑T‑‑‑GGCG‑‑‑G‑‑G‑C‑‑CACCGGAATGACCGACCCCGATTTCGGTAAGCCGATTATCGCGGTTTGGAACTCGT                                      >  SRR4302541.479441/1‑94 (MQ=60)

                                                            GTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTT                                     <  SRR4302541.7561948/94‑1 (MQ=60)

                                                            GTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTT                                     <  SRR4302541.1818625/94‑1 (MQ=60)

                                                             TCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTC                                    <  SRR4302541.2992643/94‑1 (MQ=60)

                                                             TCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTC                                    <  SRR4302541.3979226/94‑1 (MQ=60)

                                                              CGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCA                                   <  SRR4302541.2366854/94‑1 (MQ=60)

                                                               GTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAC                                  <  SRR4302541.3039149/94‑1 (MQ=60)

                                                               GTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAC                                  <  SRR4302541.3855331/94‑1 (MQ=60)

                                                               GTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAC                                  <  SRR4302541.757228/94‑1 (MQ=60)

                                                               GTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAC                                  <  SRR4302541.4491442/94‑1 (MQ=60)

                                                               GTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCAC                                  <  SRR4302541.7528280/94‑1 (MQ=60)

                                                                TAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACC                                 <  SRR4302541.8260125/94‑1 (MQ=60)

                                                                 AATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCC                                <  SRR4302541.7310136/94‑1 (MQ=60)

                                                                 AATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCC                                <  SRR4302541.4716301/94‑1 (MQ=60)

                                                                 AATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCC                                <  SRR4302541.4987067/94‑1 (MQ=60)

                                                                 AATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCC                                <  SRR4302541.8118260/94‑1 (MQ=60)

                                                                  ATATGGCGGGTGCTCGTGCGCTGTT‑‑‑G‑‑C‑‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCA                               <  SRR4302541.2278399/94‑1 (MQ=60)

                                                                  ATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCA                               <  SRR4302541.847180/94‑1 (MQ=60)

                                                                  ATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCA                               <  SRR4302541.6539768/94‑1 (MQ=60)

                                                                  ATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCA                               <  SRR4302541.3088452/94‑1 (MQ=60)

                                                                  ATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCA                               <  SRR4302541.2535387/94‑1 (MQ=60)

                                                                   TATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAA                              <  SRR4302541.5743391/94‑1 (MQ=60)

                                                                   TATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAA                              <  SRR4302541.3348819/94‑1 (MQ=60)

                                                                    ATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAAT                             <  SRR4302541.5809349/94‑1 (MQ=60)

                                                                     TGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATT                            <  SRR4302541.3041285/94‑1 (MQ=60)

                                                                     TGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATT                            <  SRR4302541.7066549/94‑1 (MQ=60)

                                                                     TGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATT                            <  SRR4302541.4468225/94‑1 (MQ=60)

                                                                     TGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATT                            <  SRR4302541.4021818/94‑1 (MQ=60)

                                                                     TGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATT                            <  SRR4302541.809476/94‑1 (MQ=60)

                                                                      GGCGGGTGGTCGTGCGTTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTT                           <  SRR4302541.2073191/94‑1 (MQ=60)

                                                                      GGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCCATTT                           >  SRR4302541.192690/1‑94 (MQ=60)

                                                                      GGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTT                           <  SRR4302541.2511191/94‑1 (MQ=60)

                                                                      GGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTT                           <  SRR4302541.221301/94‑1 (MQ=60)

                                                                      GGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTT                           <  SRR4302541.7516408/94‑1 (MQ=60)

                                                                      GGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTT                           <  SRR4302541.5315829/94‑1 (MQ=60)

                                                                      GGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTT                           <  SRR4302541.2799378/94‑1 (MQ=60)

                                                                      GGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTT                           <  SRR4302541.5979847/94‑1 (MQ=60)

                                                                      GGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACAGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTT                           <  SRR4302541.2602801/94‑1 (MQ=60)

                                                                       GCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTG                          <  SRR4302541.5642858/94‑1 (MQ=60)

                                                                        CGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGT                         <  SRR4302541.3147175/94‑1 (MQ=60)

                                                                        CGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGT                         >  SRR4302541.5286400/1‑94 (MQ=60)

                                                                         GGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTA                        >  SRR4302541.1416470/1‑94 (MQ=60)

                                                                         GGGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTA                        <  SRR4302541.6266121/94‑1 (MQ=60)

                                                                          GGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAC                       <  SRR4302541.1015934/94‑1 (MQ=60)

                                                                          GGTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTAC                       >  SRR4302541.4734032/1‑94 (MQ=60)

                                                                           GTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACC                      <  SRR4302541.4965192/94‑1 (MQ=60)

                                                                           GTGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACC                      <  SRR4302541.1241538/94‑1 (MQ=60)

                                                                            TGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCG                     >  SRR4302541.6665608/1‑94 (MQ=60)

                                                                            TGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCG                     >  SRR4302541.1108313/1‑94 (MQ=60)

                                                                            TGCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCG                     >  SRR4302541.1208718/1‑94 (MQ=60)

                                                                             GCTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGG                    <  SRR4302541.8079458/94‑1 (MQ=60)

                                                                              CTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGG                   <  SRR4302541.1066229/94‑1 (MQ=60)

                                                                              CTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGG                   <  SRR4302541.3647003/94‑1 (MQ=60)

                                                                              CTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGG                   <  SRR4302541.6222486/94‑1 (MQ=60)

                                                                              CTCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGG                   >  SRR4302541.1632956/1‑94 (MQ=60)

                                                                               TCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGT                  >  SRR4302541.8511047/1‑94 (MQ=60)

                                                                               TCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGT                  >  SRR4302541.8511044/1‑94 (MQ=60)

                                                                               TCGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGC                  >  SRR4302541.3589444/1‑94 (MQ=60)

                                                                                CGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTC                 >  SRR4302541.2214216/1‑94 (MQ=60)

                                                                                CGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTC                 <  SRR4302541.607494/94‑1 (MQ=60)

                                                                                CGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTC                 >  SRR4302541.5245844/1‑94 (MQ=60)

                                                                                CGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTC                 <  SRR4302541.49968/94‑1 (MQ=60)

                                                                                CGTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTC                 >  SRR4302541.2514566/1‑94 (MQ=60)

                                                                                 GTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCC                >  SRR4302541.1620196/1‑94 (MQ=60)

                                                                                 GTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCA                <  SRR4302541.4563261/94‑1 (MQ=60)

                                                                                 GTGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCA                <  SRR4302541.7765627/94‑1 (MQ=60)

                                                                                  TGCGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCACGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCAC               >  SRR4302541.8026326/1‑94 (MQ=60)

                                                                                    CGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGT             <  SRR4302541.3392129/94‑1 (MQ=60)

                                                                                    CGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGT             <  SRR4302541.6247659/94‑1 (MQ=60)

                                                                                    CGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGT             >  SRR4302541.4509573/1‑94 (MQ=60)

                                                                                    CGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGT             >  SRR4302541.4441414/1‑94 (MQ=60)

                                                                                    CGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGT             >  SRR4302541.1392138/1‑94 (MQ=60)

                                                                                    CGCTG‑T‑‑‑G‑‑GC‑‑G‑‑CGC‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGT             <  SRR4302541.6088092/94‑1 (MQ=60)

                                                                                                        G‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTGCGCG  <  SRR4302541.8343376/94‑1 (MQ=60)

                                                                                                        G‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTGCGCG  <  SRR4302541.2421006/94‑1 (MQ=60)

AGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTG‑T‑‑‑G‑‑G‑‑‑G‑‑C‑C‑‑CACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTGCGCG  >  NC_000913/3951075‑3951261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`