Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,972,637	2 bp→GC	coding (430‑431/546 nt)	wecD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,972,637	0	C	G	100.0%	1678.7 / NA	489	R144A (CGT→GCT)	wecD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (229/260); total (229/260)
*	NC_000913	3,972,638	0	G	C	99.8%	1679.9 / ‑5.1	489	R144A (CGT→GCT)	wecD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (228/260); minor base T (1/0); total (229/260)
Fisher's exact test for biased strand distribution p-value = 4.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01

Only 100 of 500 total aligned reads displayed.

CTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATCGTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAG  >  NC_000913/3972550‑3972724

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  cAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCgg                                                                                  <  1:4171417/93‑1 (MQ=255)

   aaTGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGt                                                                                 >  2:3276969/1‑93 (MQ=255)

    aTGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTa                                                                                >  2:6820935/1‑93 (MQ=255)

    aTGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTa                                                                                >  1:6149841/1‑93 (MQ=255)

    aTGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTa                                                                                <  2:8140378/93‑1 (MQ=255)

        gACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTaaaaa                                                                            >  2:3060562/1‑92 (MQ=255)

        gACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAaac                                                                            <  1:6775648/93‑1 (MQ=255)

         aCAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAaaca                                                                           >  1:8539054/1‑93 (MQ=255)

         aCAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAaaca                                                                           >  1:4961875/1‑93 (MQ=255)

          cAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAaacaa                                                                          <  1:151821/93‑1 (MQ=255)

          cAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGGGCTGGGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAaacca                                                                          >  2:4441627/1‑91 (MQ=255)

           aGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAaacaac                                                                         <  2:5829793/93‑1 (MQ=255)

            gATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACt                                                                        >  2:1352614/1‑93 (MQ=255)

            gATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACt                                                                        <  1:1332954/93‑1 (MQ=255)

              tGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACttt                                                                      <  1:4629500/93‑1 (MQ=255)

              tGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAAAttt                                                                      >  1:5891574/1‑93 (MQ=255)

              agcgcGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGGAAAACAACttt                                                                      <  2:2609268/92‑1 (MQ=255)

                cgcgAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGc                                                                    <  1:100120/93‑1 (MQ=255)

                 gcgAATTGGCCTGCTGGCTGGACGCGGGGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGAGAGAATGCTCCCGGTAAAACAACTTTGCg                                                                   >  2:7948809/1‑93 (MQ=255)

                  cgAATTGGCCTGCTGGCTGGACCCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAACCAACTTTGCgg                                                                  <  1:4063005/93‑1 (MQ=255)

                   gAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCggg                                                                 <  1:5666471/93‑1 (MQ=255)

                   gAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCggg                                                                 >  2:911405/1‑93 (MQ=255)

                   gAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCggg                                                                 <  1:1671438/93‑1 (MQ=255)

                    aaTTGGCCTGCTGGCTGGACGCGGTGCAGGTTCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGt                                                                <  1:6644412/93‑1 (MQ=255)

                     aTTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTg                                                               <  2:3487856/93‑1 (MQ=255)

                     aTTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTg                                                               >  1:8086233/1‑93 (MQ=255)

                     aTTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTg                                                               <  2:115984/93‑1 (MQ=255)

                     aTTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTg                                                               >  1:7654069/1‑93 (MQ=255)

                     aTTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTg                                                               >  2:2254551/1‑93 (MQ=255)

                      ttGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAAAAACTTTGCGGGTgg                                                              >  1:7761226/1‑93 (MQ=255)

                        ggCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCg                                                            >  2:4477974/1‑93 (MQ=255)

                        ggCCTGCTGGCTGGACGCGGTGCAGGCGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCg                                                            >  1:2892778/1‑93 (MQ=255)

                         gCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGa                                                           <  1:3535087/93‑1 (MQ=255)

                          ccTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGAc                                                          <  2:39432/93‑1 (MQ=255)

                           ctgctgGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGAcc                                                         <  1:640556/93‑1 (MQ=255)

                           ctgctgGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGAcc                                                         <  2:4288249/93‑1 (MQ=255)

                               tggctggACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCaaa                                                     >  2:2910411/1‑93 (MQ=255)

                               tggctggACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCaaa                                                     >  1:3470009/1‑93 (MQ=255)

                                 gctggACGCGGTGCAGGTGCTGATCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATg                                                   <  2:6276015/93‑1 (MQ=255)

                                 gctggACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATg                                                   <  1:368761/93‑1 (MQ=255)

                                 gctggACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATg                                                   <  1:7556284/93‑1 (MQ=255)

                                  ctggACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATgg                                                  >  2:726659/1‑93 (MQ=255)

                                   tggACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATggg                                                 >  1:4412301/1‑93 (MQ=255)

                                    ggACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGc                                                >  2:8696677/1‑93 (MQ=255)

                                     gACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCa                                               >  2:7591594/1‑93 (MQ=255)

                                       cgcgGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAac                                             <  1:3365422/93‑1 (MQ=255)

                                       cgcgGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAac                                             <  2:7704161/93‑1 (MQ=255)

                                       cgcgGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAac                                             <  2:8546029/93‑1 (MQ=255)

                                        gcgGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAaca                                            >  2:3702333/1‑93 (MQ=255)

                                         cgGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAacac                                           <  1:8602633/93‑1 (MQ=255)

                                          ggTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACAcc                                          >  1:5489745/1‑93 (MQ=255)

                                          ggTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACAcc                                          <  2:1501575/93‑1 (MQ=255)

                                           gTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACAccg                                         >  2:2404933/1‑93 (MQ=255)

                                           gTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACAccg                                         >  1:505874/1‑93 (MQ=255)

                                            tGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACAccgc                                        <  2:5474884/93‑1 (MQ=255)

                                            tGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACAccgc                                        <  2:7183941/93‑1 (MQ=255)

                                            tGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACAccgc                                        >  1:2283320/1‑93 (MQ=255)

                                             gCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACAccgcc                                       <  2:6183879/93‑1 (MQ=255)

                                                 gTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCgcgc                                   >  1:2132479/1‑93 (MQ=255)

                                                  tGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCt                                  >  1:7935225/1‑93 (MQ=255)

                                                    ctgagctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTa                                <  2:6670233/93‑1 (MQ=255)

                                                    ctgagctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTa                                >  1:8758037/1‑93 (MQ=255)

                                                     tgagctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCACATGGGCAACACCGCCGCGCTTaa                               <  1:1957278/93‑1 (MQ=255)

                                                     tgagctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTaa                               >  2:5658903/1‑93 (MQ=255)

                                                     tgagctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTaa                               >  2:5382131/1‑93 (MQ=255)

                                                      gagctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTaaa                              >  2:4155294/1‑93 (MQ=255)

                                                      gagctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTaaa                              <  1:2741374/93‑1 (MQ=255)

                                                      gagctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTaaa                              <  2:5143720/93‑1 (MQ=255)

                                                       agctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAAc                             >  2:4885447/1‑93 (MQ=255)

                                                        gctgaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACg                            <  1:2567985/93‑1 (MQ=255)

                                                          tgaTGCAAACGGCGCTAAACTGGGCGAATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGat                          <  2:6009793/93‑1 (MQ=255)

                                                           gaTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGata                         <  1:4762367/93‑1 (MQ=255)

                                                            aTGCAAACGTCGCTACACTGGGCGTATGCTCGCGGTAAAACAACGTTGCGGGCGGCGACCAAAATGGGCCACACCGCCGCGCTTAAACGatac                        >  2:6978360/1‑93 (MQ=255)

                                                            aTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGatac                        <  1:650309/93‑1 (MQ=255)

                                                            aTGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGatac                        >  1:320392/1‑93 (MQ=255)

                                                             tGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGataca                       <  2:1686430/93‑1 (MQ=255)

                                                              gCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCAACCCAAATGGGAAACACTCCCGCGCTTAAACGatacaa                      >  2:1763081/1‑92 (MQ=255)

                                                                aaaCGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGatacatac                    >  2:4719987/1‑93 (MQ=255)

                                                                 aaCGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGAtacataca                   >  1:2413553/1‑93 (MQ=255)

                                                                 aaCGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGAtacataca                   >  1:1811618/1‑93 (MQ=255)

                                                                 aaCGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGAtacataca                   >  2:1929149/1‑93 (MQ=255)

                                                                  aCGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACaa                  >  2:210699/1‑93 (MQ=255)

                                                                   cGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACaaa                 <  1:7037508/93‑1 (MQ=255)

                                                                    ggCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAg                >  2:5334763/1‑93 (MQ=255)

                                                                    ggCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAg                <  1:8328878/93‑1 (MQ=255)

                                                                     gcgcTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAga               >  1:6935242/1‑92 (MQ=255)

                                                                      ggcTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAgtg              <  1:3895462/92‑1 (MQ=255)

                                                                      cgcTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAgtg              <  2:7878866/93‑1 (MQ=255)

                                                                       gcTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAgtgg             <  1:4002592/93‑1 (MQ=255)

                                                                       gcTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAgtgg             <  2:1077909/93‑1 (MQ=255)

                                                                       gcTAAACGGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAgtgg             <  1:8632865/93‑1 (MQ=255)

                                                                        cTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAgtggt            <  1:3058779/93‑1 (MQ=255)

                                                                          aaaCTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGc          >  1:7367721/1‑93 (MQ=255)

                                                                           aaCTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCg         >  1:7201671/1‑93 (MQ=255)

                                                                            aCTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGa        >  2:7413521/1‑93 (MQ=255)

                                                                             cTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGaa       <  2:3541129/93‑1 (MQ=255)

                                                                              tGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAAt      >  2:8374206/1‑93 (MQ=255)

                                                                               gggCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATg     <  1:5261219/93‑1 (MQ=255)

                                                                                ggCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGt    <  2:379799/93‑1 (MQ=255)

                                                                                ggCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGt    <  1:1235650/93‑1 (MQ=255)

||

CTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATCGTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAG  >  NC_000913/3972550‑3972724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 270 total aligned reads displayed.

CGGGAACTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATCGTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAGAA  >  NC_000913/3972544‑3972726

CGGGAACTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATG                                                                                           >  SRR4302541.6789083/1‑94 (MQ=60)

CGGGAACTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATG                                                                                           <  SRR4302541.6554301/94‑1 (MQ=60)

     ACTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGC                                                                                      <  SRR4302541.3316015/94‑1 (MQ=60)

      CTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCG                                                                                     >  SRR4302541.32886/1‑94 (MQ=60)

       TCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGG                                                                                    >  SRR4302541.7116447/1‑94 (MQ=60)

       TCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGG                                                                                    >  SRR4302541.7769355/1‑94 (MQ=60)

       TCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGG                                                                                    >  SRR4302541.7116446/1‑94 (MQ=60)

       TCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGG                                                                                    <  SRR4302541.6569211/94‑1 (MQ=60)

        CAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGT                                                                                   >  SRR4302541.3148960/1‑94 (MQ=60)

        CAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGT                                                                                   <  SRR4302541.4212771/94‑1 (MQ=60)

         AATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTA                                                                                  >  SRR4302541.5876723/1‑94 (MQ=60)

         AATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTA                                                                                  >  SRR4302541.4908068/1‑94 (MQ=60)

         AATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTA                                                                                  >  SRR4302541.8062367/1‑94 (MQ=60)

         AATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTA                                                                                  >  SRR4302541.6212670/1‑94 (MQ=60)

          ATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAA                                                                                 <  SRR4302541.5167572/94‑1 (MQ=60)

           TGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAA                                                                                <  SRR4302541.4741000/94‑1 (MQ=60)

           TGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAA                                                                                >  SRR4302541.8447961/1‑94 (MQ=60)

            GCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAA                                                                               <  SRR4302541.7728272/94‑1 (MQ=60)

            GCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAA                                                                               <  SRR4302541.1928586/94‑1 (MQ=60)

            GCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAA                                                                               <  SRR4302541.3374364/94‑1 (MQ=60)

            GCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAA                                                                               >  SRR4302541.3949544/1‑94 (MQ=60)

              GACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACA                                                                             <  SRR4302541.6848115/94‑1 (MQ=60)

              GACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACA                                                                             >  SRR4302541.8630860/1‑94 (MQ=60)

              GACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACA                                                                             >  SRR4302541.4750362/1‑94 (MQ=60)

              GACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACA                                                                             >  SRR4302541.5012666/1‑94 (MQ=60)

                CAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAAC                                                                           <  SRR4302541.152965/94‑1 (MQ=60)

                 AGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACT                                                                          >  SRR4302541.8548446/1‑94 (MQ=60)

                  GATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTT                                                                         >  SRR4302541.2323382/1‑94 (MQ=60)

                   ATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTT                                                                        <  SRR4302541.2640151/94‑1 (MQ=60)

                   ATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAAATTT                                                                        >  SRR4302541.5951526/1‑94 (MQ=60)

                    TGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTG                                                                       <  SRR4302541.4676606/94‑1 (MQ=60)

                    TGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTG                                                                       <  SRR4302541.4676605/94‑1 (MQ=60)

                    TGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTG                                                                       <  SRR4302541.2046387/94‑1 (MQ=60)

                      CGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCG                                                                     <  SRR4302541.100969/94‑1 (MQ=60)

                      CGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCG                                                                     <  SRR4302541.719628/94‑1 (MQ=60)

                       GCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGG                                                                    >  SRR4302541.7764458/1‑94 (MQ=60)

                        CGAATTGGCCTGCTGGCTGGACCCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAACCAACTTTGCGGG                                                                   <  SRR4302541.4103104/94‑1 (MQ=60)

                         GAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGT                                                                  >  SRR4302541.240916/1‑94 (MQ=60)

                         GAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGT                                                                  <  SRR4302541.1687908/94‑1 (MQ=60)

                         GAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGT                                                                  <  SRR4302541.5724327/94‑1 (MQ=60)

                         GAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGT                                                                  >  SRR4302541.8195159/1‑94 (MQ=60)

                         GAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGT                                                                  <  SRR4302541.3287772/94‑1 (MQ=60)

                         GAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGT                                                                  >  SRR4302541.2090305/1‑94 (MQ=60)

                         GAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGG                                                                  >  SRR4302541.5291687/1‑94 (MQ=60)

                          AATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTG                                                                 >  SRR4302541.7735587/1‑94 (MQ=60)

                          AATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTG                                                                 <  SRR4302541.7695683/94‑1 (MQ=60)

                          AATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTG                                                                 <  SRR4302541.6844447/94‑1 (MQ=60)

                          AATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTG                                                                 >  SRR4302541.1185662/1‑94 (MQ=60)

                          AATTGGCCTGCTGGCTGGACGCGGGGCAGGGGCTGAGCTGAGGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTG                                                                 >  SRR4302541.8174890/1‑94 (MQ=60)

                          AATTGGCCTGCTGGCTGGACGCGGCGCAGGTGCTGAGACGATGCAAACGGCGGTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTG                                                                 >  SRR4302541.4413692/1‑94 (MQ=60)

                           ATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGG                                                                <  SRR4302541.2477297/94‑1 (MQ=60)

                           ATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGG                                                                <  SRR4302541.7723251/94‑1 (MQ=60)

                           ATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGG                                                                <  SRR4302541.7590734/94‑1 (MQ=60)

                           ATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGG                                                                >  SRR4302541.5088269/1‑94 (MQ=60)

                           ATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAAAAACTTTGCGGGTGG                                                                >  SRR4302541.7843802/1‑94 (MQ=60)

                             TGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCG                                                              >  SRR4302541.2288868/1‑94 (MQ=60)

                             TGGCCTGCTGGCTGGACGCGGTGCAGGCGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCG                                                              >  SRR4302541.2921849/1‑94 (MQ=60)

                             TGGCCTGCTGGCTGGACGCAGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCG                                                              <  SRR4302541.6544570/94‑1 (MQ=60)

                              GGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGA                                                             >  SRR4302541.6622860/1‑94 (MQ=60)

                               GCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGAC                                                            <  SRR4302541.3570724/94‑1 (MQ=60)

                                CCTGCTGGCTGGACGCGGTGGAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACC                                                           <  SRR4302541.3027221/94‑1 (MQ=60)

                                CCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGTGGTAAAACAACTTTGCGGGTGGCGACC                                                           <  SRR4302541.6576410/94‑1 (MQ=60)

                                CCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACC                                                           >  SRR4302541.5788933/1‑94 (MQ=60)

                                CCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACC                                                           >  SRR4302541.3628127/1‑94 (MQ=60)

                                 CTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCC                                                          <  SRR4302541.646603/94‑1 (MQ=60)

                                 CTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCC                                                          >  SRR4302541.8705114/1‑94 (MQ=60)

                                  TGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCA                                                         <  SRR4302541.3106693/94‑1 (MQ=60)

                                   GCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAA                                                        <  SRR4302541.8695317/94‑1 (MQ=60)

                                    CTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAA                                                       >  SRR4302541.3504718/1‑94 (MQ=60)

                                     TGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTCAAACAACTTTGCGGGTGGCGACCCAAAT                                                      >  SRR4302541.4644321/1‑94 (MQ=60)

                                     TGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGGCCCAAAT                                                      <  SRR4302541.6329421/94‑1 (MQ=60)

                                     TGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAAT                                                      >  SRR4302541.5399113/1‑94 (MQ=60)

                                     TGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAAT                                                      <  SRR4302541.5002797/94‑1 (MQ=60)

                                     TGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAAT                                                      <  SRR4302541.3619073/94‑1 (MQ=60)

                                     TGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAAT                                                      <  SRR4302541.8040077/94‑1 (MQ=60)

                                      GGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATG                                                     <  SRR4302541.1758942/94‑1 (MQ=60)

                                      GGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATG                                                     <  SRR4302541.4057711/94‑1 (MQ=60)

                                      GGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATG                                                     <  SRR4302541.4570605/94‑1 (MQ=60)

                                       GCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGG                                                    <  SRR4302541.7637034/94‑1 (MQ=60)

                                        CTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGG                                                   <  SRR4302541.1521586/94‑1 (MQ=60)

                                        CTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGG                                                   >  SRR4302541.4456509/1‑94 (MQ=60)

                                         TGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGC                                                  >  SRR4302541.7114363/1‑94 (MQ=60)

                                         TGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGC                                                  >  SRR4302541.1293970/1‑94 (MQ=60)

                                         TGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGC                                                  <  SRR4302541.1926969/94‑1 (MQ=60)

                                         TGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGC                                                  >  SRR4302541.3415597/1‑94 (MQ=60)

                                         TGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGAGC                                                  >  SRR4302541.3826357/1‑94 (MQ=60)

                                          GGACGCGGTGCAGGTGCTGAGCTGATGCAAACTGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCA                                                 <  SRR4302541.3391185/94‑1 (MQ=60)

                                          GGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCA                                                 <  SRR4302541.6921838/94‑1 (MQ=60)

                                            ACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAAC                                               >  SRR4302541.4209161/1‑94 (MQ=60)

                                            ACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAAC                                               >  SRR4302541.872759/1‑94 (MQ=60)

                                             CGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACA                                              <  SRR4302541.2903689/94‑1 (MQ=60)

                                             CGCGAGGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACA                                              <  SRR4302541.1376601/94‑1 (MQ=60)

                                               CGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACC                                            >  SRR4302541.5546003/1‑94 (MQ=60)

                                               CGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACC                                            <  SRR4302541.2321825/94‑1 (MQ=60)

                                                GGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCG                                           >  SRR4302541.5915082/1‑94 (MQ=60)

                                                 GTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGC                                          >  SRR4302541.2981559/1‑94 (MQ=60)

                                                  TGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCC                                         <  SRR4302541.4187683/94‑1 (MQ=60)

                                                  TGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCC                                         <  SRR4302541.8654389/94‑1 (MQ=60)

                                                   GCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCG                                        <  SRR4302541.2578922/94‑1 (MQ=60)

                                                    CAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGC                                       <  SRR4302541.3930416/94‑1 (MQ=60)

                                                    CAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGC                                       >  SRR4302541.7025616/1‑94 (MQ=60)

                                                    CAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGC                                       >  SRR4302541.698134/1‑94 (MQ=60)

                                                     AGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCG                                      >  SRR4302541.5958683/1‑94 (MQ=60)

                                                     AGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCG                                      <  SRR4302541.6764153/94‑1 (MQ=60)

                                                     AGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCG                                      >  SRR4302541.374628/1‑94 (MQ=60)

                                                     AGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCG                                      <  SRR4302541.7316052/94‑1 (MQ=60)

                                                      GGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGC                                     <  SRR4302541.8053849/94‑1 (MQ=60)

                                                      GGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGC                                     >  SRR4302541.2153101/1‑94 (MQ=60)

                                                       GTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCT                                    >  SRR4302541.8022617/1‑94 (MQ=60)

                                                        TGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTT                                   <  SRR4302541.3742898/94‑1 (MQ=60)

                                                        TGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTT                                   <  SRR4302541.4058277/94‑1 (MQ=60)

                                                        TGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTT                                   <  SRR4302541.4058278/94‑1 (MQ=60)

                                                         GCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTA                                  >  SRR4302541.8004973/1‑94 (MQ=60)

                                                         GCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTA                                  >  SRR4302541.8851720/1‑94 (MQ=60)

                                                          CTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAA                                 >  SRR4302541.5143960/1‑94 (MQ=60)

                                                           TGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCACATGGGCAACACCGCCGCGCTTAAA                                <  SRR4302541.1976150/94‑1 (MQ=60)

                                                           TGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAA                                <  SRR4302541.3511831/94‑1 (MQ=60)

                                                           TGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAA                                >  SRR4302541.1850440/1‑94 (MQ=60)

                                                            GAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAAC                               <  SRR4302541.5593034/94‑1 (MQ=60)

                                                            GAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAAC                               >  SRR4302541.7512461/1‑94 (MQ=60)

                                                            GAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAAC                               <  SRR4302541.2768869/94‑1 (MQ=60)

                                                            GAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAAC                               <  SRR4302541.4014720/94‑1 (MQ=60)

                                                            GAGCGGATGCAAACGTCGCGAAACTGGGCTTAAGCTCGCGGTAAAACAGCTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAAC                               <  SRR4302541.3450155/94‑1 (MQ=60)

                                                             AGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACG                              <  SRR4302541.567011/94‑1 (MQ=60)

                                                             AGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACG                              <  SRR4302541.117415/94‑1 (MQ=60)

                                                             AGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACG                              >  SRR4302541.2202981/1‑94 (MQ=60)

                                                             AGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACG                              >  SRR4302541.2611577/1‑94 (MQ=60)

                                                             AGCTGAAGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACG                              <  SRR4302541.7503587/94‑1 (MQ=60)

                                                              GCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGA                             >  SRR4302541.4439065/1‑94 (MQ=60)

                                                              GCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGA                             <  SRR4302541.2593727/94‑1 (MQ=60)

                                                               CTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGAT                            <  SRR4302541.6184458/94‑1 (MQ=60)

                                                               CTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGAT                            <  SRR4302541.7960717/94‑1 (MQ=60)

                                                                TGATGCAAACGGGGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATA                           <  SRR4302541.1992580/94‑1 (MQ=60)

                                                                TGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATA                           <  SRR4302541.2534444/94‑1 (MQ=60)

                                                                TGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATA                           >  SRR4302541.7766443/1‑94 (MQ=60)

                                                                 GATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATAC                          <  SRR4302541.4811005/94‑1 (MQ=60)

                                                                  ATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACA                         <  SRR4302541.656445/94‑1 (MQ=60)

                                                                  ATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACA                         >  SRR4302541.8702982/1‑94 (MQ=60)

                                                                   TGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACAT                        <  SRR4302541.2673116/94‑1 (MQ=60)

                                                                   TGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACAT                        <  SRR4302541.509367/94‑1 (MQ=60)

                                                                   TGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACAT                        <  SRR4302541.15667/94‑1 (MQ=60)

                                                                   TGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACAT                        <  SRR4302541.5530669/94‑1 (MQ=60)

                                                                    GCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATA                       >  SRR4302541.2793557/1‑94 (MQ=60)

                                                                    GCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATA                       <  SRR4302541.356085/94‑1 (MQ=60)

                                                                    GCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATA                       <  SRR4302541.6431310/94‑1 (MQ=60)

                                                                     CAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATAC                      >  SRR4302541.8427896/1‑94 (MQ=60)

                                                                      AAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACA                     >  SRR4302541.1007363/1‑94 (MQ=60)

                                                                      AAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACA                     >  SRR4302541.1829235/1‑94 (MQ=60)

                                                                      AAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACA                     >  SRR4302541.2206652/1‑94 (MQ=60)

                                                                      AAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACA                     >  SRR4302541.2437306/1‑94 (MQ=60)

                                                                      AAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACA                     >  SRR4302541.6500063/1‑94 (MQ=60)

                                                                       AACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAGCGATACATACAA                    <  SRR4302541.1340497/94‑1 (MQ=60)

                                                                       AACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAA                    <  SRR4302541.1340716/94‑1 (MQ=60)

                                                                       AACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAA                    >  SRR4302541.4417690/1‑94 (MQ=60)

                                                                        ACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTCAACGATACATAAAAA                   >  SRR4302541.6983169/1‑94 (MQ=60)

                                                                        ACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAA                   >  SRR4302541.8190976/1‑94 (MQ=60)

                                                                        ACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAA                   >  SRR4302541.8772371/1‑94 (MQ=60)

                                                                        ACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAA                   >  SRR4302541.5104557/1‑94 (MQ=60)

                                                                        ACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAA                   <  SRR4302541.4031696/94‑1 (MQ=60)

                                                                          GGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGT                 >  SRR4302541.2824465/1‑94 (MQ=60)

                                                                          GGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGT                 <  SRR4302541.8419353/94‑1 (MQ=60)

                                                                          GGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGA                 >  SRR4302541.7009233/1‑94 (MQ=60)

                                                                          GGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATAAAAAGT                 >  SRR4302541.7040210/1‑94 (MQ=60)

                                                                          GGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACAGCCGCGCTTAAACGATACATACAAAGG                 >  SRR4302541.4170758/1‑94 (MQ=60)

                                                                           GCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTG                <  SRR4302541.1670186/94‑1 (MQ=60)

                                                                           GCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTG                >  SRR4302541.1776821/1‑94 (MQ=60)

                                                                            GGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGG               <  SRR4302541.3934476/94‑1 (MQ=60)

                                                                            CGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGG               <  SRR4302541.1082954/94‑1 (MQ=60)

                                                                             GCTAAACTGTGGGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGT              <  SRR4302541.7947483/94‑1 (MQ=60)

                                                                             GCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGT              <  SRR4302541.6654650/94‑1 (MQ=60)

                                                                             GCTAAACGGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGT              <  SRR4302541.8725362/94‑1 (MQ=60)

                                                                              CTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACCCCGCCGCGCTTAAACGATACATACAAAGTGGTG             <  SRR4302541.5541927/94‑1 (MQ=60)

                                                                              CTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTG             >  SRR4302541.4299462/1‑94 (MQ=60)

                                                                              CTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTG             <  SRR4302541.3409380/94‑1 (MQ=60)

                                                                              CTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTG             <  SRR4302541.4997770/94‑1 (MQ=60)

                                                                              CTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTG             <  SRR4302541.3089764/94‑1 (MQ=60)

                                                                              CTAAACTGGGCGTATGCTCGCGGTAAAACAACTGTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTG             <  SRR4302541.3496139/94‑1 (MQ=60)

                                                                               TAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGC            <  SRR4302541.8668613/94‑1 (MQ=60)

                                                                               TAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGC            <  SRR4302541.8668614/94‑1 (MQ=60)

                                                                                AAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCG           >  SRR4302541.1623728/1‑94 (MQ=60)

                                                                                AAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCG           >  SRR4302541.7388335/1‑94 (MQ=60)

                                                                                AAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCG           >  SRR4302541.7278508/1‑94 (MQ=60)

                                                                                 AACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGA          >  SRR4302541.3064154/1‑94 (MQ=60)

                                                                                 AACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGAGCTTAAACGATACATACAAAGTGGTGCGA          <  SRR4302541.8737875/94‑1 (MQ=60)

                                                                                  ACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAA         >  SRR4302541.6206151/1‑94 (MQ=60)

                                                                                  ACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAA         <  SRR4302541.6729717/94‑1 (MQ=60)

                                                                                   CTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAAT        >  SRR4302541.1366855/1‑94 (MQ=60)

                                                                                    TGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATG       <  SRR4302541.352912/94‑1 (MQ=60)

                                                                                    TGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATG       >  SRR4302541.7102324/1‑94 (MQ=60)

                                                                                     GGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGT      <  SRR4302541.5315432/94‑1 (MQ=60)

                                                                                     GGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGT      >  SRR4302541.4926104/1‑94 (MQ=60)

                                                                                     GGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGT      >  SRR4302541.3131672/1‑94 (MQ=60)

                                                                                      GGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTA     <  SRR4302541.4467429/94‑1 (MQ=60)

                                                                                      GGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTA     <  SRR4302541.1247827/94‑1 (MQ=60)

                                                                                       GCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAG    <  SRR4302541.1435912/94‑1 (MQ=60)

                                                                                       GCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAA    >  SRR4302541.7376443/1‑94 (MQ=60)

                                                                                        CGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAGA   >  SRR4302541.8679754/1‑94 (MQ=60)

                                                                                        CGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAGA   >  SRR4302541.5423889/1‑94 (MQ=60)

                                                                                        CGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAGA   <  SRR4302541.3718512/94‑1 (MQ=60)

                                                                                         GTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAGAA  >  SRR4302541.7682429/1‑94 (MQ=60)

CGGGAACTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATCGTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAGAA  >  NC_000913/3972544‑3972726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 5 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`