Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,001,717	+C	coding (86/903 nt)	rarD ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,001,717	1	.	C	99.8%	1593.5 / NA	476	T29R (ACG→AGG)	rarD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); major base C (217/258); minor base A (0/1); total (217/259)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 571 total aligned reads displayed.

TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATT  >  NC_000913/4001625‑4001803

tGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACg                                                                                         >  1:606216/1‑93 (MQ=255)

tGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACg                                                                                         >  2:1594497/1‑93 (MQ=255)

 gCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTACgc                                                                                        >  2:3928397/1‑92 (MQ=255)

  cTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgct                                                                                       <  1:428961/93‑3 (MQ=255)

  cTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgct                                                                                       <  1:7876240/93‑3 (MQ=255)

  cTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgct                                                                                       <  2:8685270/93‑3 (MQ=255)

   tcatcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTGAATCAACTTGAAGTACgctg                                                                                      >  2:7539991/1‑90 (MQ=255)

   tcatcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgctg                                                                                      <  2:2364543/93‑4 (MQ=255)

   tcatcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgctg                                                                                      >  1:407419/1‑90 (MQ=255)

      tcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGgcg                                                                                   >  2:7421010/1‑93 (MQ=255)

       caGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGgcgc                                                                                  <  1:6639602/93‑1 (MQ=255)

         gCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCta                                                                                <  2:2758111/93‑1 (MQ=255)

         acaccacCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCta                                                                                <  1:4450915/92‑1 (MQ=255)

           accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTACGCTGGCGCtata                                                                              >  2:2045760/1‑93 (MQ=255)

            ccaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAc                                                                             <  1:3781040/93‑1 (MQ=255)

            ccaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTAAGCTGGCGCTATAc                                                                             >  2:6797637/1‑93 (MQ=255)

            ccaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTCCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAc                                                                             >  1:221215/1‑93 (MQ=255)

             cgccaTAAAGAAAAACGAGCGGATCACCAGATGCGTCAGGATTTCATCGGCCGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAcc                                                                            <  2:1250771/91‑1 (MQ=255)

              accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAccc                                                                           <  1:1771126/93‑1 (MQ=255)

               ccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAcccc                                                                          <  1:7121817/93‑1 (MQ=255)

               ccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAcccc                                                                          >  1:1421074/1‑93 (MQ=255)

                caTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCa                                                                         >  2:4318249/1‑93 (MQ=255)

                 aTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaa                                                                        >  2:3977942/1‑93 (MQ=255)

                  tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaa                                                                       >  2:8514636/1‑93 (MQ=255)

                    aaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGAACGTAGTAAAACAAATTGAAGTACGCTTGCGCTATACCCCaaata                                                                     >  2:4431569/1‑93 (MQ=255)

                      gAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaa                                                                   >  2:4242386/1‑93 (MQ=255)

                        aaaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaat                                                                 >  1:5860784/1‑93 (MQ=255)

                         aaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaata                                                                >  1:8009056/1‑93 (MQ=255)

                         aaaCGACCAGAGCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaata                                                                <  2:8753790/93‑1 (MQ=255)

                           aCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAg                                                              <  2:179982/93‑1 (MQ=255)

                           aCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAg                                                              <  2:3632217/93‑1 (MQ=255)

                            cGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGc                                                             >  2:901046/1‑93 (MQ=255)

                            cGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGc                                                             <  1:3338333/93‑1 (MQ=255)

                             gACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCCAATAAAATAAGCg                                                            >  2:3208707/1‑93 (MQ=255)

                             gACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCg                                                            <  2:5958166/93‑1 (MQ=255)

                              aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCgg                                                           <  1:1999578/93‑1 (MQ=255)

                               ccAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGc                                                          <  2:3109539/93‑1 (MQ=255)

                               ccAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGGACGCTGGCGCTATACCCCAAATAAAAAAAGCGGc                                                          >  1:8796430/1‑93 (MQ=255)

                                cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCa                                                         <  1:4509/93‑1 (MQ=255)

                                 aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCaa                                                        >  1:5221800/1‑93 (MQ=255)

                                 aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCaa                                                        <  1:4710765/93‑1 (MQ=255)

                                 aGATCACGCGATGCGTCAGGAGTTCATCGGCGGGCAAGGGGTTAATCAACTTGAAGGAAGCTCGCGCTATAGCCCAAATAAAATAAGCGGCaa                                                        >  2:5833031/1‑93 (MQ=255)

                                   aTCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                      >  1:5101189/1‑93 (MQ=255)

                                    tCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAagag                                                     >  2:5095906/1‑93 (MQ=255)

                                     cACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGc                                                    <  1:5480691/93‑1 (MQ=255)

                                      aCGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCg                                                   >  2:2680806/1‑93 (MQ=255)

                                      aCGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGGACGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGAACg                                                   >  1:7741377/1‑93 (MQ=255)

                                       cgcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGa                                                  <  2:1409984/93‑1 (MQ=255)

                                        gcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAg                                                 >  2:8608108/1‑93 (MQ=255)

                                        gcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTAAGCTGGCGCTATACCCCAAATAAAATAAGCGGGAAGAGCGAg                                                 >  2:5301888/1‑93 (MQ=255)

                                          gATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTa                                               <  2:8326572/93‑1 (MQ=255)

                                           aTGCGTCAGGATTTCATCGGCGGGGACGTAGTAAATCAACTTGAAGAAAGCTGGCGCCATACCCCAAATAAACTAAACGGCAAGAGCGAGGaa                                              >  2:1142604/1‑93 (MQ=255)

                                           aTGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTaa                                              <  1:8557309/93‑1 (MQ=255)

                                           aTGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTaa                                              >  1:2591056/1‑93 (MQ=255)

                                             gCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATa                                            <  1:6559230/93‑1 (MQ=255)

                                             gCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATa                                            <  2:4903714/93‑1 (MQ=255)

                                             gCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATa                                            <  1:3892588/93‑1 (MQ=255)

                                             gCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATa                                            >  1:6961279/1‑93 (MQ=255)

                                             gCGTCAGGATTTCATCGGCGGGCACGTAGGAAAACAACTTTAAGTACGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGAGCGAGGAATa                                            >  2:7690825/1‑93 (MQ=255)

                                                  aGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGccc                                       <  1:16210/93‑1 (MQ=255)

                                                  aGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGccc                                       <  2:7210646/93‑1 (MQ=255)

                                                   ggATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCt                                      >  1:7412154/1‑93 (MQ=255)

                                                     aTTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGc                                    <  1:7650762/93‑1 (MQ=255)

                                                      tttCATCGGCGGGCACGTAGGAAATCAATTTTAAGGACGTTGTCGCTTTAGCCCAAATTGAATAAGCGGTCAGAGCGAGTGATACGACCTggc                                   >  2:6414182/1‑91 (MQ=255)

                                                       ttCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCcg                                  <  1:3629290/93‑1 (MQ=255)

                                                       ttCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCcg                                  <  1:4197907/93‑1 (MQ=255)

                                                        tCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCcgc                                 >  2:7765027/1‑93 (MQ=255)

                                                          aTCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgt                               <  1:11848/93‑1 (MQ=255)

                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                              >  1:8307197/1‑93 (MQ=255)

                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                              <  2:384240/93‑1 (MQ=255)

                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                              >  1:6796228/1‑93 (MQ=255)

                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                              <  1:2999762/93‑1 (MQ=255)

                                                            cggcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgttt                             >  2:4555271/1‑93 (MQ=255)

                                                             ggcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttg                            <  2:1892610/93‑1 (MQ=255)

                                                              gcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgt                           <  2:343085/93‑1 (MQ=255)

                                                                gggCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgttt                         >  2:2598404/1‑93 (MQ=255)

                                                                    aCGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                     >  1:977583/1‑93 (MQ=255)

                                                                    aCGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                     >  1:8114732/1‑93 (MQ=255)

                                                                     cGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcat                    <  1:5425607/93‑1 (MQ=255)

                                                                     cGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcat                    >  2:6700510/1‑93 (MQ=255)

                                                                       tagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcc                  <  2:7944002/93‑1 (MQ=255)

                                                                       tagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcc                  <  1:2803561/93‑1 (MQ=255)

                                                                       tagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcc                  <  2:2967884/93‑1 (MQ=255)

                                                                        agtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcca                 >  2:6326451/1‑93 (MQ=255)

                                                                        agtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcca                 <  1:3205665/93‑1 (MQ=255)

                                                                         gtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                <  2:5388937/93‑1 (MQ=255)

                                                                         gtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                <  1:2926325/93‑1 (MQ=255)

                                                                          taAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGCAATACGCCCTGCCGCGTTTGTTTTGcatccatc               >  1:8493124/1‑93 (MQ=255)

                                                                            aaTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCgg             >  2:8136717/1‑93 (MQ=255)

                                                                            aaTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCgg             <  1:4983836/93‑1 (MQ=255)

                                                                              tCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGa           <  2:7039735/93‑1 (MQ=255)

                                                                              tCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGa           >  2:3317240/1‑93 (MQ=255)

                                                                                aaCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAt         >  2:4695689/1‑93 (MQ=255)

                                                                                aaCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAt         <  2:610621/93‑1 (MQ=255)

                                                                                aaCTTGAAGTACGCTGGCGCTATACCCCAAATAAAAGAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAt         <  1:7245600/93‑1 (MQ=255)

                                                                                 aCTTGAAGTACGCTGGCGCTATTCCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATa        <  1:1043402/93‑1 (MQ=255)

                                                                                  cTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAc       <  1:6196670/93‑1 (MQ=255)

                                                                                   ttGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACt      >  2:6535669/1‑93 (MQ=255)

                                                                                   ttGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACt      <  2:8278048/93‑1 (MQ=255)

                                                                                   ttGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTATTGCATCAATCGGGAATACt      >  1:2432787/1‑93 (MQ=255)

TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATT  >  NC_000913/4001625‑4001803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 290 total aligned reads displayed.

ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATT  >  NC_000913/4001624‑4001810

ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG                                                                                                <  SRR4302541.7159245/94‑1 (MQ=60)

ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG                                                                                                >  SRR4302541.7987831/1‑94 (MQ=60)

ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG                                                                                                >  SRR4302541.668878/1‑94 (MQ=60)

ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG                                                                                                >  SRR4302541.611924/1‑94 (MQ=60)

 TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑C                                                                                              >  SRR4302541.6200591/1‑94 (MQ=60)

  GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                              <  SRR4302541.1610372/94‑3 (MQ=60)

  GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGct                                                                                              >  SRR4302541.1228202/1‑92 (MQ=60)

   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGTACGctg                                                                                             >  SRR4302541.4024721/1‑91 (MQ=60)

   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             >  SRR4302541.4575505/1‑91 (MQ=60)

   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             <  SRR4302541.432975/94‑4 (MQ=60)

   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             <  SRR4302541.3299622/94‑4 (MQ=60)

   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             >  SRR4302541.411195/1‑91 (MQ=60)

   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             <  SRR4302541.1522963/94‑4 (MQ=60)

   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             <  SRR4302541.5294987/94‑4 (MQ=60)

    TCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGG                                                                                            >  SRR4302541.959408/1‑94 (MQ=60)

    TCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGG                                                                                            >  SRR4302541.3823698/1‑94 (MQ=60)

     CATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                           <  SRR4302541.7806547/94‑1 (MQ=60)

     CAACACCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                           <  SRR4302541.5640260/94‑1 (MQ=60)

      ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCG                                                                                          <  SRR4302541.7643356/94‑1 (MQ=60)

       TCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGC                                                                                         >  SRR4302541.684857/1‑94 (MQ=60)

          ACACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTAT                                                                                      <  SRR4302541.4495681/94‑1 (MQ=60)

           CACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATA                                                                                     >  SRR4302541.828560/1‑94 (MQ=60)

           CACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATA                                                                                     >  SRR4302541.4284447/1‑94 (MQ=60)

           CACCACCATAAAGAAAAACGACCAGATCACGCAATGCGTCAGGAGTTCATCGCCAGGCACGGACTAAATCAAATTCAAGAACGCTGGCGCTATA                                                                                     >  SRR4302541.3701475/1‑94 (MQ=38)

            ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAC                                                                                    >  SRR4302541.4338259/1‑94 (MQ=60)

            ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTACGCTGGCGCTATAC                                                                                    >  SRR4302541.7420440/1‑94 (MQ=60)

            ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTCCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAC                                                                                    >  SRR4302541.222924/1‑94 (MQ=60)

              CACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTAAGCTGGCGCTATACCC                                                                                  >  SRR4302541.3024830/1‑94 (MQ=60)

               ACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCC                                                                                 <  SRR4302541.1788341/94‑1 (MQ=60)

               ACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCC                                                                                 >  SRR4302541.2886991/1‑94 (MQ=60)

                CCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCA                                                                                <  SRR4302541.8906349/94‑1 (MQ=60)

                CCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCA                                                                                <  SRR4302541.7197677/94‑1 (MQ=60)

                CCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCA                                                                                <  SRR4302541.7197675/94‑1 (MQ=60)

                CCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTATCCCCCA                                                                                >  SRR4302541.5169610/1‑94 (MQ=60)

                 CATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAA                                                                               >  SRR4302541.443028/1‑94 (MQ=60)

                  ATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAA                                                                              <  SRR4302541.2230533/94‑1 (MQ=60)

                    AAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATA                                                                            >  SRR4302541.5383809/1‑94 (MQ=60)

                      AGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAA                                                                          >  SRR4302541.3016558/1‑94 (MQ=60)

                      AGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGCAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAA                                                                          <  SRR4302541.3271819/94‑1 (MQ=60)

                        AAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAT                                                                        >  SRR4302541.3730176/1‑94 (MQ=60)

                          AAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAA                                                                      >  SRR4302541.1320477/1‑94 (MQ=60)

                          AAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAA                                                                      >  SRR4302541.5138052/1‑94 (MQ=60)

                          AAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAA                                                                      <  SRR4302541.8207019/94‑1 (MQ=60)

                          AAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGGATATCAACTTGAAGCACGCTGGCGCTATACCACAAATAAAATAA                                                                      >  SRR4302541.4575514/1‑94 (MQ=60)

                           AACGACCAGATCCCGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAG                                                                     <  SRR4302541.391923/94‑1 (MQ=60)

                           AACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAG                                                                     <  SRR4302541.5117362/94‑1 (MQ=60)

                            ACGACCAGATCACGCGATGCGTGAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGC                                                                    <  SRR4302541.4531794/94‑1 (MQ=60)

                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302541.1827243/94‑1 (MQ=60)

                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302541.3371733/94‑1 (MQ=60)

                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302541.5948256/94‑1 (MQ=60)

                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302541.7186049/94‑1 (MQ=60)

                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302541.4028896/94‑1 (MQ=60)

                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATCAAATAAGCG                                                                   >  SRR4302541.160864/1‑94 (MQ=60)

                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   >  SRR4302541.3824720/1‑94 (MQ=60)

                              GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGGACGTAGGAAATCAACTTGAAGTCCGCTGGGGTTATACCCCAAATAAAATAAGCGG                                                                  >  SRR4302541.2947423/1‑94 (MQ=60)

                              GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGG                                                                  >  SRR4302541.1176537/1‑94 (MQ=60)

                              GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGG                                                                  >  SRR4302541.85073/1‑94 (MQ=60)

                               ACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGC                                                                 <  SRR4302541.2018944/94‑1 (MQ=60)

                               ACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGC                                                                 <  SRR4302541.377131/94‑1 (MQ=60)

                               ACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGGACGCTGGCGCTATACCCCAAATAAAAAAAGCGGC                                                                 >  SRR4302541.8890380/1‑94 (MQ=60)

                               ACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGA                                                                 >  SRR4302541.1473280/1‑94 (MQ=60)

                                CCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCCAATAAAATAACAGGCA                                                                >  SRR4302541.824808/1‑94 (MQ=60)

                                CCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCA                                                                <  SRR4302541.3204816/94‑1 (MQ=60)

                                 CAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAA                                                               <  SRR4302541.4549/94‑1 (MQ=60)

                                 CAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAA                                                               <  SRR4302541.8744679/94‑1 (MQ=60)

                                 CAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAA                                                               >  SRR4302541.7231411/1‑94 (MQ=60)

                                 CAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAA                                                               >  SRR4302541.5275613/1‑94 (MQ=60)

                                  AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAG                                                              >  SRR4302541.2906937/1‑94 (MQ=60)

                                  AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAG                                                              >  SRR4302541.3155353/1‑94 (MQ=60)

                                  AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAG                                                              >  SRR4302541.404355/1‑94 (MQ=60)

                                  AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAG                                                              <  SRR4302541.4758790/94‑1 (MQ=60)

                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                             >  SRR4302541.7462074/1‑94 (MQ=60)

                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                             >  SRR4302541.5153600/1‑94 (MQ=60)

                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                             >  SRR4302541.5427656/1‑94 (MQ=60)

                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                             <  SRR4302541.6855879/94‑1 (MQ=60)

                                    ATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAG                                                            >  SRR4302541.7892331/1‑94 (MQ=60)

                                     TCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCCAATAAAATAAGCGGCAAGAGC                                                           >  SRR4302541.4859691/1‑94 (MQ=60)

                                     TCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGC                                                           <  SRR4302541.3909984/94‑1 (MQ=60)

                                     TCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGC                                                           <  SRR4302541.1644650/94‑1 (MQ=60)

                                      CACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCG                                                          <  SRR4302541.7162846/94‑1 (MQ=60)

                                      CACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGGACGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGAACG                                                          >  SRR4302541.7823743/1‑94 (MQ=60)

                                      CACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGGTAACAAACCTTAAGTAAGCTGGCGATCTACCCCAAATAAAATAAGCGGCATGAGCG                                                          >  SRR4302541.1520049/1‑94 (MQ=28)

                                       ACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGA                                                         >  SRR4302541.2102479/1‑94 (MQ=60)

                                       ACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGA                                                         <  SRR4302541.783973/94‑1 (MQ=60)

                                        CGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAG                                                        >  SRR4302541.8126287/1‑94 (MQ=60)

                                        CGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAG                                                        >  SRR4302541.3775803/1‑94 (MQ=60)

                                         GCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGT                                                       >  SRR4302541.5094332/1‑94 (MQ=60)

                                         GCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGC                                                       <  SRR4302541.2102762/94‑1 (MQ=60)

                                         GCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGA                                                       >  SRR4302541.5994665/1‑94 (MQ=60)

                                         GCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGA                                                       >  SRR4302541.2045179/1‑94 (MQ=60)

                                          CGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTA                                                      <  SRR4302541.5485961/94‑1 (MQ=60)

                                          CGATGCGTCAGGATTTCATCGGCGGGCAAGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACTCCAAATTAAATAAGCTGCAAGAGagcgga                                                      >  SRR4302541.3898731/1‑88 (MQ=60)

                                           GATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAATTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAA                                                     <  SRR4302541.8498891/94‑1 (MQ=60)

                                           GATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAA                                                     >  SRR4302541.2509232/1‑94 (MQ=60)

                                           GATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAA                                                     >  SRR4302541.5228499/1‑94 (MQ=60)

                                            ATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAT                                                    <  SRR4302541.6945583/94‑1 (MQ=60)

                                            ATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGAGGCAAGAGCGAGTAAA                                                    >  SRR4302541.5513594/1‑94 (MQ=60)

                                             TGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATA                                                   >  SRR4302541.7035477/1‑94 (MQ=60)

                                              GCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATAC                                                  <  SRR4302541.6626291/94‑1 (MQ=60)

                                              GCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATAC                                                  <  SRR4302541.7737330/94‑1 (MQ=60)

                                              GCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATAC                                                  <  SRR4302541.3931594/94‑1 (MQ=60)

                                                GTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGC                                                >  SRR4302541.3491630/1‑94 (MQ=60)

                                                GTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGGAATACGC                                                >  SRR4302541.3363862/1‑94 (MQ=60)

                                                GTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAACCCAAATAAAATAAGCGGCAAGAGCGAGAAATACGC                                                >  SRR4302541.6282063/1‑94 (MQ=60)

                                                  CAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCC                                              <  SRR4302541.4248276/94‑1 (MQ=60)

                                                  CAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTAAGCTGGCGTTATACCCCAAATAAAATAAGCGGCAAGAGCGAGcaaaatgccc                                              >  SRR4302541.1978457/1‑84 (MQ=60)

                                                   AGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAaagcccct                                             >  SRR4302541.3394148/1‑86 (MQ=60)

                                                   AGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCT                                             <  SRR4302541.4133359/94‑1 (MQ=60)

                                                   AGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCT                                             >  SRR4302541.7491429/1‑94 (MQ=60)

                                                   AGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCT                                             >  SRR4302541.8605531/1‑94 (MQ=60)

                                                   AGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCT                                             <  SRR4302541.3682204/94‑1 (MQ=60)

                                                   AGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGCAATACGCCCT                                             <  SRR4302541.5520121/94‑1 (MQ=60)

                                                    GGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACACCAAATAAAATAAGCGGCAAGATCGAGTAATACGCCCTG                                            >  SRR4302541.4398510/1‑94 (MQ=60)

                                                     GATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGC                                           >  SRR4302541.7442847/1‑94 (MQ=60)

                                                     GATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGGAATACGCCCTGC                                           >  SRR4302541.6779215/1‑94 (MQ=60)

                                                      GTTTCATCGGCGGGCAGGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCC                                          <  SRR4302541.2512013/94‑1 (MQ=60)

                                                      ATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCC                                          <  SRR4302541.7732272/94‑1 (MQ=60)

                                                      ATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCC                                          <  SRR4302541.4561816/94‑1 (MQ=60)

                                                      ATTTCATCGGCGGGCACGTAGTAAATAAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCC                                          >  SRR4302541.6879744/1‑94 (MQ=60)

                                                        TTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGG                                        >  SRR4302541.7204249/1‑94 (MQ=60)

                                                        TTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGC                                        <  SRR4302541.4239611/94‑1 (MQ=60)

                                                         TCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAGATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCG                                       >  SRR4302541.4148161/1‑94 (MQ=60)

                                                         TCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCG                                       <  SRR4302541.7333708/94‑1 (MQ=60)

                                                           ATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                     <  SRR4302541.11929/94‑1 (MQ=60)

                                                           ATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                     >  SRR4302541.8853397/1‑94 (MQ=60)

                                                           ATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                     <  SRR4302541.23259/94‑1 (MQ=60)

                                                           ATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                     >  SRR4302541.7995104/1‑94 (MQ=60)

                                                           ATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                     >  SRR4302541.6868908/1‑94 (MQ=60)

                                                           ATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                     >  SRR4302541.8469888/1‑94 (MQ=60)

                                                           ATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                     >  SRR4302541.8397504/1‑94 (MQ=60)

                                                            TCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                    >  SRR4302541.1166834/1‑94 (MQ=60)

                                                            TCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                    <  SRR4302541.2535936/94‑1 (MQ=60)

                                                             CGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTG                                   <  SRR4302541.8035483/94‑1 (MQ=60)

                                                             CGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAGTCGCCCTGCCGCGTTTG                                   >  SRR4302541.7926337/1‑94 (MQ=60)

                                                              GGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGT                                  <  SRR4302541.5751641/94‑1 (MQ=60)

                                                               GCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTT                                 <  SRR4302541.3569910/94‑1 (MQ=60)

                                                                CGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTT                                <  SRR4302541.5849369/94‑1 (MQ=60)

                                                                CGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGCAATACGCCCTGCCGCGTTTGTTT                                <  SRR4302541.2601561/94‑1 (MQ=60)

                                                                 GGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                               <  SRR4302541.3391728/94‑1 (MQ=60)

                                                                 GGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                               <  SRR4302541.3039586/94‑1 (MQ=60)

                                                                 GGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                               <  SRR4302541.1667197/94‑1 (MQ=60)

                                                                 GGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                               <  SRR4302541.4525808/94‑1 (MQ=60)

                                                                  GGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTG                              <  SRR4302541.4829558/94‑1 (MQ=60)

                                                                  GGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTG                              <  SRR4302541.7019068/94‑1 (MQ=60)

                                                                    CACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCA                            >  SRR4302541.3127660/1‑94 (MQ=60)

                                                                    CACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCA                            >  SRR4302541.8203636/1‑94 (MQ=60)

                                                                     ACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCAT                           <  SRR4302541.1058923/94‑1 (MQ=60)

                                                                     ACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCAT                           <  SRR4302541.6204080/94‑1 (MQ=60)

                                                                       GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                         >  SRR4302541.4504429/1‑94 (MQ=60)

                                                                       GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                         >  SRR4302541.8367312/1‑94 (MQ=60)

                                                                       GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                         <  SRR4302541.1740207/94‑1 (MQ=60)

                                                                       GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                         <  SRR4302541.5967019/94‑1 (MQ=60)

                                                                       GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                         >  SRR4302541.3028959/1‑94 (MQ=60)

                                                                       GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                         <  SRR4302541.6711946/94‑1 (MQ=60)

                                                                       GTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCC                         >  SRR4302541.2277048/1‑94 (MQ=60)

                                                                        TAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCA                        <  SRR4302541.2831915/94‑1 (MQ=60)

                                                                        TAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCA                        >  SRR4302541.3309794/1‑94 (MQ=60)

                                                                        TAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCA                        <  SRR4302541.2831914/94‑1 (MQ=60)

                                                                         AGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                       >  SRR4302541.6663234/1‑94 (MQ=60)

                                                                         AGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                       <  SRR4302541.5888931/94‑1 (MQ=60)

                                                                          GTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATC                      <  SRR4302541.2955747/94‑1 (MQ=60)

                                                                          GTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGCAATACGCCCTGCCGCGTTTGTTTTGCATCCATC                      >  SRR4302541.8584639/1‑94 (MQ=60)

                                                                          GTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGAGATACGCCCTGCCGCGTTTGTTTTGCATCCATG                      >  SRR4302541.8896883/1‑94 (MQ=60)

                                                                          GTAAATCAACTTGAAGTACGCGGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATC                      <  SRR4302541.4435668/94‑1 (MQ=60)

                                                                           TAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCG                     <  SRR4302541.7676023/94‑1 (MQ=60)

                                                                           TAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCG                     <  SRR4302541.1207082/94‑1 (MQ=60)

                                                                           TAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCG                     <  SRR4302541.6066446/94‑1 (MQ=60)

                                                                           TAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGCTTGTTTTGCATCCATCG                     >  SRR4302541.6410644/1‑94 (MQ=60)

                                                                            AAATCAACTTGAAGTACGCTGGCGCTATGCCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGG                    <  SRR4302541.1812238/94‑1 (MQ=60)

                                                                            AAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGG                    >  SRR4302541.8727823/1‑94 (MQ=60)

                                                                            AAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGG                    >  SRR4302541.5527207/1‑94 (MQ=60)

                                                                             AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGG                   <  SRR4302541.7951934/94‑1 (MQ=60)

                                                                             AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGG                   <  SRR4302541.5034961/94‑1 (MQ=60)

                                                                             AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGG                   <  SRR4302541.4167284/94‑1 (MQ=60)

                                                                             AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCAACCATCGGG                   <  SRR4302541.5231520/94‑1 (MQ=60)

                                                                               TCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAA                 >  SRR4302541.857392/1‑94 (MQ=60)

                                                                                 AACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATA               <  SRR4302541.8613624/94‑1 (MQ=60)

                                                                                 AACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATA               <  SRR4302541.7519396/94‑1 (MQ=60)

                                                                                 AACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATA               >  SRR4302541.8142071/1‑94 (MQ=60)

                                                                                 AACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAGAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATA               <  SRR4302541.7322882/94‑1 (MQ=60)

                                                                                  ACTTGAAGTACGCTGGCGCTATTCCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC              <  SRR4302541.1053071/94‑1 (MQ=60)

                                                                                  ACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC              >  SRR4302541.4563682/1‑94 (MQ=60)

                                                                                  ACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC              >  SRR4302541.5432984/1‑94 (MQ=60)

                                                                                  ACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC              >  SRR4302541.8065495/1‑94 (MQ=60)

                                                                                  ACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC              <  SRR4302541.637476/94‑1 (MQ=60)

                                                                                   CTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACT             <  SRR4302541.7792217/94‑1 (MQ=60)

                                                                                   CTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACT             <  SRR4302541.6259987/94‑1 (MQ=60)

                                                                                   CTTCAAGTACGCTGGCGCTATGCCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACT             <  SRR4302541.2600978/94‑1 (MQ=60)

                                                                                     TGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTTCCGCGTTTGTTTTGCATCCATCGGGAATACTCA           <  SRR4302541.1293875/94‑1 (MQ=60)

                                                                                     TGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCA           >  SRR4302541.6675482/1‑94 (MQ=60)

                                                                                     TGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCA           >  SRR4302541.864531/1‑94 (MQ=60)

                                                                                      GAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAT          <  SRR4302541.4910710/94‑1 (MQ=60)

                                                                                        AGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTT        <  SRR4302541.4271037/94‑1 (MQ=60)

                                                                                        AGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTT        >  SRR4302541.618645/1‑94 (MQ=60)

                                                                                        AGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTT        <  SRR4302541.2743666/94‑1 (MQ=60)

                                                                                        AGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTT        <  SRR4302541.2743665/94‑1 (MQ=60)

                                                                                         GTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTT       >  SRR4302541.6336046/1‑94 (MQ=60)

                                                                                          TACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT      <  SRR4302541.503898/94‑1 (MQ=60)

                                                                                          TACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT      <  SRR4302541.6057323/94‑1 (MQ=60)

                                                                                             C‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGGTTTGCATCCATCGGGAATACTCATTTTTAATT  >  SRR4302541.935522/1‑94 (MQ=60)

ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATT  >  NC_000913/4001624‑4001810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`