Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,005,601	+C	coding (237/282 nt)	b4568 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,005,600	1	.	C	99.2%	1773.8 / 2.4	517	coding (236/282 nt)	b4568	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (2/2); new base C (260/253); total (262/255)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 561 total aligned reads displayed.

CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC  >  NC_000913/4005508‑4005689

 gTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GG‑c                                                                                          >  1:4685162/1‑93 (MQ=255)

  tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGCTTATGGTGGGCGG‑T‑GG‑cc                                                                                         >  2:7556101/1‑92 (MQ=255)

  tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GG‑cc                                                                                         <  2:6198268/93‑2 (MQ=255)

    aTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GG‑cctg                                                                                       >  2:6688869/1‑90 (MQ=255)

    aTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GG‑cctg                                                                                       >  1:3179634/1‑90 (MQ=255)

       gTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTAt                                                                                     >  2:7179057/1‑93 (MQ=255)

          tGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTAtctc                                                                                  <  2:4208202/93‑1 (MQ=255)

           gggCTGGGAATGCGCTGCTTGGCTTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGTCGG‑T‑GGCCTGTATctct                                                                                 >  2:1150543/1‑93 (MQ=255)

            ggCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTctg                                                                                >  1:5632276/1‑93 (MQ=255)

              cTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTctgct                                                                              <  2:5811153/93‑1 (MQ=255)

              cTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTctgct                                                                              >  2:3263961/1‑93 (MQ=255)

              cTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTctgct                                                                              >  1:2737855/1‑93 (MQ=255)

               tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTctgctg                                                                             <  2:1317765/93‑1 (MQ=255)

               tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTctgctg                                                                             >  1:485234/1‑93 (MQ=255)

                gggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTgg                                                                            >  2:3472031/1‑93 (MQ=255)

                  gATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGAt                                                                          <  1:2383619/93‑1 (MQ=255)

                  gATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGAt                                                                          >  1:41945/1‑93 (MQ=255)

                  gATGGCGCTGCTTGGCCTGCATTTGAGTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGAt                                                                          <  1:1667410/93‑1 (MQ=255)

                   aTTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATg                                                                         <  2:7348628/93‑1 (MQ=255)

                   aTTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATg                                                                         <  2:2095018/93‑1 (MQ=255)

                     tGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATggg                                                                       <  2:7991366/93‑1 (MQ=255)

                     tGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATggg                                                                       <  1:4474510/93‑1 (MQ=255)

                      gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGt                                                                      <  1:6168418/93‑1 (MQ=255)

                       cgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGtt                                                                     <  2:3683879/93‑1 (MQ=255)

                         ctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTAc                                                                   >  1:2860643/1‑93 (MQ=255)

                          tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTAcc                                                                  <  1:8485771/93‑1 (MQ=255)

                             ttGGCCTGCGTTTGATTATCAAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTCCCAGa                                                               <  2:2495879/93‑1 (MQ=255)

                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                               <  1:6645516/93‑1 (MQ=255)

                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                               >  2:4611301/1‑93 (MQ=255)

                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                               >  1:1824340/1‑93 (MQ=255)

                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                               >  1:1278407/1‑93 (MQ=255)

                              tGGCCTGCATTTTATTATCGAAGAAATGGTCTGGCCGCATGCGCTGATTATCGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGAt                                                              <  2:7269632/93‑1 (MQ=255)

                              tGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGAt                                                              <  1:1935827/93‑1 (MQ=255)

                               ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                             <  1:4995580/93‑1 (MQ=255)

                                gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATTGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTTCCAGATGc                                                            >  1:7825174/1‑93 (MQ=255)

                                gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGGTGGGGTACCAGATGc                                                            >  2:5842086/1‑93 (MQ=255)

                                gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGc                                                            <  2:8485526/93‑1 (MQ=255)

                                  cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTa                                                          >  2:1502688/1‑93 (MQ=255)

                                   tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGTGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                         >  2:5398201/1‑93 (MQ=255)

                                   tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                         <  2:2151869/93‑1 (MQ=255)

                                   tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                         <  2:7689725/93‑1 (MQ=255)

                                     cATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgt                                                       <  2:7044115/93‑1 (MQ=255)

                                      aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                      >  2:6387623/1‑93 (MQ=255)

                                       tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                     <  1:3361381/93‑1 (MQ=255)

                                        ttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggt                                                    >  1:3277718/1‑93 (MQ=255)

                                        ttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggt                                                    <  1:3697054/93‑1 (MQ=255)

                                          gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtga                                                  >  2:4447523/1‑92 (MQ=255)

                                          gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                  >  2:5963836/1‑93 (MQ=255)

                                          gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                  >  1:7541070/1‑93 (MQ=255)

                                          gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGGGc                                                  >  1:2100067/1‑93 (MQ=255)

                                            ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACGTGGTGCAc                                                >  1:8298247/1‑93 (MQ=255)

                                            ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGACTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                                                >  1:5699833/1‑93 (MQ=255)

                                             tATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                               >  2:5661260/1‑93 (MQ=255)

                                               tCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGa                                             >  1:7049168/1‑93 (MQ=255)

                                                 gAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaa                                           <  2:176989/93‑1 (MQ=255)

                                                    aaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaaa                                        >  1:638645/1‑93 (MQ=255)

                                                     aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                                       >  1:5156655/1‑93 (MQ=255)

                                                     aaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                                       <  2:196908/93‑1 (MQ=255)

                                                      aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                      >  1:3900896/1‑93 (MQ=255)

                                                      aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                      <  1:1366593/93‑1 (MQ=255)

                                                      aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                      <  1:5997116/93‑1 (MQ=255)

                                                      aaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                      <  2:8193772/93‑1 (MQ=255)

                                                       aTGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagag                                     >  2:4718219/1‑93 (MQ=255)

                                                        tGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAgg                                    >  1:7146594/1‑93 (MQ=255)

                                                        tGGCCTGGCTGCATACGCTGATTATGGGGGGGGG‑T‑GGCCTGGATCTCTGCTGGATGGGTTACCCGATGCTACGTGGTGCACTGAAAAAAGAgg                                    >  2:630441/1‑93 (MQ=255)

                                                         ggCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAggg                                   >  1:3800069/1‑92 (MQ=255)

                                                         ggCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                   <  1:258702/93‑1 (MQ=255)

                                                         ggCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACAAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                   <  2:3962322/93‑1 (MQ=255)

                                                          gCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCg                                  <  2:674342/93‑1 (MQ=255)

                                                           ccTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg                                 <  1:1150544/93‑1 (MQ=255)

                                                           ccTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg                                 <  1:1466160/93‑1 (MQ=255)

                                                            cTGGCTGCATACGCTGATTATTGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                                <  2:1455163/93‑1 (MQ=255)

                                                            cTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                                <  2:3121833/93‑1 (MQ=255)

                                                            cTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                                >  1:8670296/1‑93 (MQ=255)

                                                             cggCTGCATACGCGGATCGTGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGtt                               <  1:646115/92‑1 (MQ=255)

                                                               gCTGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTc                             <  2:6563653/93‑1 (MQ=255)

                                                                 tGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTTCTGGATGGGTTACCAGATGCTACTTGGTGCACTGAAAAAAGAGGCGGTTTCtc                           >  2:8276801/1‑92 (MQ=255)

                                                                 tGCATACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTg                           >  1:4579298/1‑93 (MQ=255)

                                                                 tGCATACGCGTAGTATGGGGGACGG‑T‑GGCCTGTATCTGTGCTGGATGGGTTCCCAGATGCTGCGTGGTGCACTGAAAAAAGAGGCGGTTTCtt                           <  2:428148/93‑2 (MQ=255)

                                                                     tACGCTGATTATGGTGGGCGGTT‑GC‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                       <  1:6800489/93‑1 (MQ=255)

                                                                     tACGCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                       <  1:5782080/93‑1 (MQ=255)

                                                                        ggtGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                    <  1:7316188/91‑1 (MQ=255)

                                                                        gCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                    <  1:2182896/93‑1 (MQ=255)

                                                                        gCTGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                    >  1:5530906/1‑93 (MQ=255)

                                                                          tGATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcgc                  >  1:8058699/1‑93 (MQ=255)

                                                                           gATTATGGTGGGCGG‑TGGG‑CTGTATCTCTGCTGGATGGGGGAGCAGATGCTACGGGGTGCACTGAAAAAAGAGGGGGTTTCTGCACCAGCGcc                 >  2:7654153/1‑93 (MQ=255)

                                                                           gATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGcc                 <  2:385041/93‑1 (MQ=255)

                                                                           gATTATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGcc                 <  1:5243524/93‑1 (MQ=255)

                                                                             ttATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac               <  1:1016889/93‑1 (MQ=255)

                                                                             ttATGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac               <  2:2745216/93‑1 (MQ=255)

                                                                               aTGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg             <  1:3541059/93‑1 (MQ=255)

                                                                               aTGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg             <  2:5128650/93‑1 (MQ=255)

                                                                               aTGGTGGGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg             <  2:2225876/93‑1 (MQ=255)

                                                                                 ggtggGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACGTGGTGCGCTGAAAAAAGAGGCGGGTTCTGCACCTGCGCCACAggg           >  2:7786541/1‑92 (MQ=255)

                                                                                  gtggGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc          <  1:961963/93‑1 (MQ=255)

                                                                                   tggGCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCg         <  1:2315498/93‑1 (MQ=255)

                                                                                    gggCGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa        <  2:4917300/93‑1 (MQ=255)

                                                                                       cGG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCt     <  1:5325048/93‑1 (MQ=255)

                                                                                        gg‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTg    <  2:8702149/93‑1 (MQ=255)

                                                                                           tggg‑CTTTTTCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCATTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGc  <  2:2832125/91‑1 (MQ=255)

CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑T‑GG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC  >  NC_000913/4005508‑4005689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 315 total aligned reads displayed.

CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  NC_000913/4005508‑4005694

CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGG‑C                                                                                               >  SRR4302541.4732882/1‑94 (MQ=60)

 GTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGG‑CC                                                                                              >  SRR4302541.8678191/1‑94 (MQ=60)

 GTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGG‑CC                                                                                              <  SRR4302541.5111902/94‑1 (MQ=60)

   AATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGG‑Cctg                                                                                            >  SRR4302541.3211756/1‑91 (MQ=60)

   AATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGG‑Cctg                                                                                            <  SRR4302541.3702264/94‑4 (MQ=60)

   AATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGG‑Cctg                                                                                            <  SRR4302541.5239609/94‑4 (MQ=60)

    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGT                                                                                            <  SRR4302541.1628047/94‑1 (MQ=60)

    ATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGT                                                                                            >  SRR4302541.8840559/1‑94 (MQ=60)

      GGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTAT                                                                                          <  SRR4302541.2251138/94‑1 (MQ=60)

      GGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTAT                                                                                          <  SRR4302541.1953146/94‑1 (MQ=60)

      GGTTTGGGCTGGGATTGCGCTGCCTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTAT                                                                                          <  SRR4302541.3173397/94‑1 (MQ=60)

       GTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATC                                                                                         <  SRR4302541.5983033/94‑1 (MQ=60)

        TTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCT                                                                                        <  SRR4302541.7458676/94‑1 (MQ=60)

         TTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTC                                                                                       <  SRR4302541.2361139/94‑1 (MQ=60)

          TGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCT                                                                                      <  SRR4302541.6513235/94‑1 (MQ=60)

          TGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCT                                                                                      <  SRR4302541.282486/94‑1 (MQ=60)

           GGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTG                                                                                     >  SRR4302541.5689882/1‑94 (MQ=60)

             GCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCT                                                                                   <  SRR4302541.1382827/94‑1 (MQ=60)

             GCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCT                                                                                   >  SRR4302541.2765300/1‑94 (MQ=60)

             GCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCT                                                                                   >  SRR4302541.4175018/1‑94 (MQ=60)

              CTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTG                                                                                  >  SRR4302541.7030858/1‑94 (MQ=60)

              CTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTG                                                                                  >  SRR4302541.489832/1‑94 (MQ=60)

              CTGGGATTGCGCTGCTTGGCCTGCATTTAATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTG                                                                                  >  SRR4302541.4514691/1‑94 (MQ=60)

                 GGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGAT                                                                               >  SRR4302541.1443772/1‑94 (MQ=60)

                 GGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGAT                                                                               <  SRR4302541.5459540/94‑1 (MQ=60)

                  GATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATG                                                                              >  SRR4302541.1929427/1‑94 (MQ=60)

                  GATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATG                                                                              <  SRR4302541.2406923/94‑1 (MQ=60)

                   ATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGG                                                                             <  SRR4302541.5234259/94‑1 (MQ=60)

                   ATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGG                                                                             <  SRR4302541.4721870/94‑1 (MQ=60)

                   ATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGG                                                                             >  SRR4302541.8892821/1‑94 (MQ=60)

                     TGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGT                                                                           <  SRR4302541.5785283/94‑1 (MQ=60)

                      GCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTT                                                                          >  SRR4302541.6099656/1‑94 (MQ=60)

                      GCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTT                                                                          <  SRR4302541.6231449/94‑1 (MQ=60)

                       CGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTC                                                                         >  SRR4302541.1254939/1‑94 (MQ=60)

                       CGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTA                                                                         <  SRR4302541.7296311/94‑1 (MQ=60)

                        GCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGTCGG‑TGGCCTGTATCTCTGCTGGATGGGTTAC                                                                        >  SRR4302541.6027251/1‑94 (MQ=60)

                        GCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTAC                                                                        >  SRR4302541.2889397/1‑94 (MQ=60)

                         CTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACC                                                                       >  SRR4302541.7461818/1‑94 (MQ=60)

                          TGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCA                                                                      >  SRR4302541.8366857/1‑94 (MQ=60)

                          TGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCA                                                                      <  SRR4302541.8577223/94‑1 (MQ=60)

                          TGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCA                                                                      >  SRR4302541.2075133/1‑94 (MQ=60)

                           GCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAG                                                                     >  SRR4302541.6250538/1‑94 (MQ=60)

                            CTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGA                                                                    >  SRR4302541.1842046/1‑94 (MQ=60)

                            CTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGA                                                                    >  SRR4302541.2666429/1‑94 (MQ=60)

                            CTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGA                                                                    >  SRR4302541.2434492/1‑94 (MQ=60)

                             TTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGAT                                                                   <  SRR4302541.6713679/94‑1 (MQ=60)

                             TTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGAT                                                                   <  SRR4302541.1354037/94‑1 (MQ=60)

                              TGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATG                                                                  <  SRR4302541.5472954/94‑1 (MQ=60)

                              TGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATG                                                                  <  SRR4302541.1954470/94‑1 (MQ=60)

                              TGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATG                                                                  >  SRR4302541.8877350/1‑94 (MQ=60)

                              TGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATG                                                                  <  SRR4302541.5361890/94‑1 (MQ=60)

                              TGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATG                                                                  >  SRR4302541.6927008/1‑94 (MQ=60)

                               GGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATTGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTTCCAGATGC                                                                 >  SRR4302541.7910175/1‑94 (MQ=60)

                               GGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGC                                                                 >  SRR4302541.526235/1‑94 (MQ=60)

                               GGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGC                                                                 >  SRR4302541.2719654/1‑94 (MQ=60)

                                GCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCT                                                                <  SRR4302541.4061197/94‑1 (MQ=60)

                                GCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGGTACCAGATGCT                                                                >  SRR4302541.8261794/1‑94 (MQ=60)

                                  CTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAC                                                              >  SRR4302541.5305778/1‑94 (MQ=60)

                                  CTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAC                                                              <  SRR4302541.8133012/94‑1 (MQ=60)

                                  CTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAC                                                              >  SRR4302541.2829892/1‑94 (MQ=60)

                                  CTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAC                                                              >  SRR4302541.4369352/1‑94 (MQ=60)

                                    GCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGT                                                            >  SRR4302541.5432406/1‑94 (MQ=60)

                                     CATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTG                                                           <  SRR4302541.5762379/94‑1 (MQ=60)

                                     CATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTG                                                           >  SRR4302541.4933805/1‑94 (MQ=60)

                                     CATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTG                                                           <  SRR4302541.377919/94‑1 (MQ=60)

                                     CATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTG                                                           >  SRR4302541.4569984/1‑94 (MQ=60)

                                       TTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGT                                                         <  SRR4302541.3394924/94‑1 (MQ=60)

                                       TTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGT                                                         <  SRR4302541.7791389/94‑1 (MQ=60)

                                       TTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGT                                                         >  SRR4302541.3310769/1‑94 (MQ=60)

                                       TTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTAACAGATGCTACGTGGG                                                         >  SRR4302541.6530200/1‑94 (MQ=60)

                                        TTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTG                                                        <  SRR4302541.3526650/94‑1 (MQ=60)

                                         TGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGC                                                       >  SRR4302541.7621671/1‑94 (MQ=60)

                                         TGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGGGC                                                       >  SRR4302541.2120420/1‑94 (MQ=60)

                                         TGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACGTGGTGC                                                       >  SRR4302541.3951929/1‑94 (MQ=60)

                                          GATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCA                                                      <  SRR4302541.4522908/94‑1 (MQ=60)

                                           ATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAC                                                     <  SRR4302541.2132217/94‑1 (MQ=60)

                                           ATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAC                                                     <  SRR4302541.1708806/94‑1 (MQ=60)

                                           ATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGGTACCAGATGCTACGTGGTGCAC                                                     >  SRR4302541.8388481/1‑94 (MQ=60)

                                           ATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGACTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAC                                                     >  SRR4302541.5757957/1‑94 (MQ=60)

                                            TTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACT                                                    >  SRR4302541.3480301/1‑94 (MQ=60)

                                            TTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACT                                                    >  SRR4302541.7655119/1‑94 (MQ=60)

                                            TTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGGGCACT                                                    >  SRR4302541.2653785/1‑94 (MQ=60)

                                             TATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTG                                                   >  SRR4302541.1756365/1‑94 (MQ=60)

                                              ATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGA                                                  >  SRR4302541.7124141/1‑94 (MQ=60)

                                              ATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGA                                                  >  SRR4302541.7202376/1‑94 (MQ=60)

                                              ATAGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGA                                                  >  SRR4302541.5316988/1‑94 (MQ=60)

                                               TCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAA                                                 <  SRR4302541.284079/94‑1 (MQ=60)

                                               TCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAA                                                 >  SRR4302541.6022154/1‑94 (MQ=60)

                                                CGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAA                                                <  SRR4302541.2936188/94‑1 (MQ=60)

                                                CGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAA                                                >  SRR4302541.1265689/1‑94 (MQ=60)

                                                CGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGAGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAA                                                >  SRR4302541.4191664/1‑94 (MQ=60)

                                                 GAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAA                                               <  SRR4302541.3671271/94‑1 (MQ=60)

                                                   AAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAA                                             >  SRR4302541.644672/1‑94 (MQ=60)

                                                   AAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAA                                             >  SRR4302541.5710076/1‑94 (MQ=60)

                                                    AAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAG                                            <  SRR4302541.6306049/94‑1 (MQ=60)

                                                    AAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAG                                            <  SRR4302541.5151708/94‑1 (MQ=60)

                                                    AAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAG                                            <  SRR4302541.2212111/94‑1 (MQ=60)

                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          >  SRR4302541.6388750/1‑94 (MQ=60)

                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          <  SRR4302541.5045069/94‑1 (MQ=60)

                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          <  SRR4302541.6058553/94‑1 (MQ=60)

                                                      AATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAG                                          <  SRR4302541.1380051/94‑1 (MQ=60)

                                                       ATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGG                                         >  SRR4302541.6492309/1‑94 (MQ=60)

                                                       ATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGG                                         <  SRR4302541.8595404/94‑1 (MQ=60)

                                                       ATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGG                                         <  SRR4302541.2519655/94‑1 (MQ=60)

                                                       ATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGG                                         >  SRR4302541.7205814/1‑94 (MQ=60)

                                                        TGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGG                                        >  SRR4302541.3838313/1‑94 (MQ=60)

                                                        TGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGC                                        <  SRR4302541.2152828/94‑1 (MQ=60)

                                                        TGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGC                                        <  SRR4302541.6779503/94‑1 (MQ=60)

                                                        TGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGC                                        <  SRR4302541.4494470/94‑1 (MQ=60)

                                                         GGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCG                                       <  SRR4302541.260808/94‑1 (MQ=60)

                                                         GGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCG                                       >  SRR4302541.2926499/1‑94 (MQ=60)

                                                         GGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCG                                       <  SRR4302541.3891884/94‑1 (MQ=60)

                                                          GCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGG                                      <  SRR4302541.1197564/94‑1 (MQ=60)

                                                           CCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGT                                     <  SRR4302541.1480519/94‑1 (MQ=60)

                                                           CCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGT                                     <  SRR4302541.1161524/94‑1 (MQ=60)

                                                           CCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGT                                     <  SRR4302541.1480520/94‑1 (MQ=60)

                                                           CCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGT                                     >  SRR4302541.458412/1‑94 (MQ=60)

                                                           CCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGT                                     >  SRR4302541.8763087/1‑94 (MQ=60)

                                                            CTGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTT                                    >  SRR4302541.6699000/1‑94 (MQ=60)

                                                            CTGGCTGCATACGCTGATTATGGTGGGCGG‑GGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGGGCACTGAAAAAAGAGGCGGGT                                    >  SRR4302541.169872/1‑94 (MQ=60)

                                                             TGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTT                                   >  SRR4302541.1165500/1‑94 (MQ=60)

                                                             TGGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGGTT                                   >  SRR4302541.7915086/1‑94 (MQ=60)

                                                             CGGCTGCATACGCGGATCGTGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTT                                   <  SRR4302541.652217/94‑1 (MQ=60)

                                                              GGCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTC                                  >  SRR4302541.5638755/1‑94 (MQ=60)

                                                               GCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCT                                 <  SRR4302541.7127356/94‑1 (MQ=60)

                                                               GCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCT                                 >  SRR4302541.1580124/1‑94 (MQ=60)

                                                               GCTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCT                                 <  SRR4302541.112293/94‑1 (MQ=60)

                                                                CTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTG                                <  SRR4302541.360461/94‑1 (MQ=60)

                                                                CTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTG                                >  SRR4302541.4625690/1‑94 (MQ=60)

                                                                CTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTG                                <  SRR4302541.4816325/94‑1 (MQ=60)

                                                                CTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTG                                <  SRR4302541.8410945/94‑1 (MQ=60)

                                                                CTGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTG                                <  SRR4302541.4687157/94‑1 (MQ=60)

                                                                 TGCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGC                               >  SRR4302541.3909311/1‑94 (MQ=60)

                                                                  GCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTGTGCA                              >  SRR4302541.5732833/1‑94 (MQ=60)

                                                                  GCATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCA                              >  SRR4302541.5732832/1‑94 (MQ=60)

                                                                   CATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAC                             >  SRR4302541.7840901/1‑94 (MQ=60)

                                                                   CATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAC                             <  SRR4302541.8510652/94‑1 (MQ=60)

                                                                    ATACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACC                            >  SRR4302541.6716920/1‑94 (MQ=60)

                                                                     TACGCTGATTATGGTGGGCGGTTGC‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCT                           <  SRR4302541.6873225/94‑1 (MQ=60)

                                                                     TACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCT                           <  SRR4302541.8457557/94‑1 (MQ=60)

                                                                     TACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCT                           <  SRR4302541.1028128/94‑1 (MQ=60)

                                                                     TACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCT                           <  SRR4302541.5840863/94‑1 (MQ=60)

                                                                      ACGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTG                          <  SRR4302541.1321613/94‑1 (MQ=60)

                                                                       CGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGC                         >  SRR4302541.5587527/1‑94 (MQ=60)

                                                                       CGCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGC                         >  SRR4302541.5587525/1‑94 (MQ=60)

                                                                        GCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCG                        <  SRR4302541.7394299/94‑1 (MQ=60)

                                                                        GCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCG                        >  SRR4302541.1306776/1‑94 (MQ=60)

                                                                        GCTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCG                        >  SRR4302541.3821029/1‑94 (MQ=60)

                                                                         GTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGC                       <  SRR4302541.332948/94‑1 (MQ=60)

                                                                         CTGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGC                       >  SRR4302541.3390102/1‑94 (MQ=60)

                                                                          TGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAACAAAGAGGCGGTTTCTGCACCTGCGCC                      >  SRR4302541.2314999/1‑94 (MQ=60)

                                                                          TGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCC                      <  SRR4302541.6746583/94‑1 (MQ=60)

                                                                          TGATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCC                      >  SRR4302541.7091798/1‑94 (MQ=60)

                                                                           GATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     >  SRR4302541.3349387/1‑94 (MQ=60)

                                                                           GATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     >  SRR4302541.5137450/1‑94 (MQ=60)

                                                                           GATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     <  SRR4302541.3243606/94‑1 (MQ=60)

                                                                           GATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     >  SRR4302541.814604/1‑94 (MQ=60)

                                                                           GATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCA                     <  SRR4302541.3243605/94‑1 (MQ=60)

                                                                           GATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTCCGCCC                     >  SRR4302541.2578826/1‑94 (MQ=60)

                                                                            ATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCAC                    >  SRR4302541.385298/1‑94 (MQ=60)

                                                                            ATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCAC                    >  SRR4302541.3737026/1‑94 (MQ=60)

                                                                            ATTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCAC                    <  SRR4302541.6461142/94‑1 (MQ=60)

                                                                             TTATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACA                   <  SRR4302541.1026291/94‑1 (MQ=60)

                                                                               ATGGTGGGCGG‑TGGCCTTTCTCTCTGCTGGATGGGTTGCCAGATTCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGG                 <  SRR4302541.3576777/94‑1 (MQ=60)

                                                                               ATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGG                 <  SRR4302541.3576778/94‑1 (MQ=60)

                                                                               ATGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGCTTCTGCACCTGCGCCACAGG                 >  SRR4302541.4834765/1‑94 (MQ=60)

                                                                                TGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGACAAAAGAGGCGGTTTCTGCACCTGCGCCCCAGGC                >  SRR4302541.4407968/1‑94 (MQ=60)

                                                                                TGGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGT                <  SRR4302541.1440971/94‑1 (MQ=60)

                                                                                 GGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTC               >  SRR4302541.5161159/1‑94 (MQ=60)

                                                                                 GGTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTC               <  SRR4302541.4672698/94‑1 (MQ=60)

                                                                                  GTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCG              <  SRR4302541.971025/94‑1 (MQ=60)

                                                                                  GTGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCG              <  SRR4302541.2290607/94‑1 (MQ=60)

                                                                                   TGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGA             <  SRR4302541.1617992/94‑1 (MQ=60)

                                                                                   TGGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGA             <  SRR4302541.2337966/94‑1 (MQ=60)

                                                                                    GGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAG            <  SRR4302541.7334718/94‑1 (MQ=60)

                                                                                    GGGCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAG            <  SRR4302541.6128156/94‑1 (MQ=60)

                                                                                      GCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT          >  SRR4302541.1111908/1‑94 (MQ=60)

                                                                                      GCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT          <  SRR4302541.4937405/94‑1 (MQ=60)

                                                                                      GCGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCT          >  SRR4302541.1922739/1‑94 (MQ=60)

                                                                                       CGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG         <  SRR4302541.2168320/94‑1 (MQ=60)

                                                                                       CGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG         >  SRR4302541.5357289/1‑94 (MQ=60)

                                                                                       CGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG         >  SRR4302541.2037998/1‑94 (MQ=60)

                                                                                       CGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG         <  SRR4302541.729747/94‑1 (MQ=60)

                                                                                       CGG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG         <  SRR4302541.2372448/94‑1 (MQ=60)

                                                                                        GG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        <  SRR4302541.7993800/94‑1 (MQ=60)

                                                                                        GG‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGG        >  SRR4302541.8202983/1‑94 (MQ=60)

                                                                                         G‑TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC       <  SRR4302541.3160004/94‑1 (MQ=60)

                                                                                         G‑TGGCCTGTATCTCTGCTGCATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGC       <  SRR4302541.8665412/94‑1 (MQ=60)

                                                                                           TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCG      <  SRR4302541.3956690/94‑1 (MQ=60)

                                                                                           TGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCG      <  SRR4302541.5577188/94‑1 (MQ=60)

                                                                                            ggcCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGA     >  SRR4302541.8489566/4‑94 (MQ=60)

                                                                                             C‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAA   >  SRR4302541.6894780/1‑94 (MQ=60)

                                                                                             C‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAA   <  SRR4302541.5459149/94‑1 (MQ=60)

                                                                                             C‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAA   <  SRR4302541.7664067/94‑1 (MQ=60)

                                                                                             C‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAA   >  SRR4302541.2820421/1‑94 (MQ=60)

                                                                                             C‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAA   >  SRR4302541.1954234/1‑94 (MQ=60)

                                                                                             C‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAA   >  SRR4302541.2121409/1‑94 (MQ=60)

                                                                                               CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  SRR4302541.6551553/1‑94 (MQ=60)

                                                                                               CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  SRR4302541.7234464/1‑94 (MQ=60)

                                                                                               CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTATGAACCTGCGCCACAGGTCGAGCTGGCGACAA  >  SRR4302541.4608120/1‑94 (MQ=60)

CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGG‑TGG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAA  >  NC_000913/4005508‑4005694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`