Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,006,483 +C coding (183/207 nt) b4554 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,006,4801.C97.5% 1575.3 / 25.5 471coding (186/207 nt)b4554hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (8/4);  new base C (253/205);  total (262/209)
Fisher's exact test for biased strand distribution p-value = 5.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 533 total aligned reads displayed.

GGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG  >  NC_000913/4006388‑4006567
                                                                                              |                                                                                       
ggcgCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGt                                                                                          <  1:7623441/93‑1 (MQ=255)
ggcgCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGt                                                                                          <  2:5401581/93‑1 (MQ=255)
 gcgcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑c                                                                                        <  2:2209241/93‑1 (MQ=255)
 gcgcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑c                                                                                        >  1:7241031/1‑93 (MQ=255)
  cgcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑cc                                                                                       <  1:8345372/93‑1 (MQ=255)
  cgcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑cc                                                                                       <  2:1857199/93‑1 (MQ=255)
     gcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑cccca                                                                                    >  1:3004325/1‑91 (MQ=255)
      ccACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑ccccaa                                                                                   <  1:6533953/93‑4 (MQ=255)
      ccACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑ccccaa                                                                                   <  1:5312208/93‑4 (MQ=255)
       cACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑ccccaac                                                                                  <  1:7838642/93‑5 (MQ=255)
       cACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑ccccaac                                                                                  >  2:6953403/1‑89 (MQ=255)
           gctgGATTCCCGGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAAAG‑CGTCCCCAACCCCa                                                                               <  2:3692844/93‑1 (MQ=255)
           gctgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCa                                                                               <  2:546021/93‑1 (MQ=255)
            ctgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCAc                                                                              <  2:462661/93‑1 (MQ=255)
             tgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACg                                                                             >  1:3687997/1‑93 (MQ=255)
              ggATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGc                                                                            <  2:3233495/93‑1 (MQ=255)
              ggATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGc                                                                            <  2:7764608/93‑1 (MQ=255)
                 ttCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCaa                                                                         <  2:3539911/93‑1 (MQ=255)
                 ttCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCaa                                                                         <  1:4812124/93‑1 (MQ=255)
                 ttCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCaa                                                                         >  1:8570723/1‑93 (MQ=255)
                 ttCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCaa                                                                         <  2:7241453/93‑1 (MQ=255)
                   cccAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAAcc                                                                       <  1:5636260/93‑1 (MQ=255)
                    ccAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCa                                                                      >  1:2601310/1‑93 (MQ=255)
                     cAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAg                                                                     >  1:5013693/1‑93 (MQ=255)
                     cAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAg                                                                     >  1:5944085/1‑93 (MQ=255)
                      aGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGc                                                                    <  1:2421271/93‑1 (MQ=255)
                            aTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAata                                                              <  1:672761/93‑1 (MQ=255)
                               aaGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGa                                                           >  1:4233439/1‑93 (MQ=255)
                               aaGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGa                                                           >  2:8254557/1‑93 (MQ=255)
                                aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGaa                                                          <  1:8762123/93‑1 (MQ=255)
                                aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGaa                                                          <  1:2656126/93‑1 (MQ=255)
                                aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGaa                                                          >  2:4362498/1‑93 (MQ=255)
                                 gTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAAt                                                         <  1:4290938/93‑1 (MQ=255)
                                 gTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAAt                                                         <  2:3067682/93‑1 (MQ=255)
                                  tAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATc                                                        <  1:7132030/93‑1 (MQ=255)
                                  tAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATc                                                        >  1:4359980/1‑93 (MQ=255)
                                    aGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGc                                                      >  2:4096952/1‑93 (MQ=255)
                                     gCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGcc                                                     >  2:1252294/1‑93 (MQ=255)
                                     gCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGcc                                                     <  2:5613548/93‑1 (MQ=255)
                                      ccGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCa                                                    <  1:1918697/93‑1 (MQ=255)
                                       cgcgCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAg                                                   <  2:5774149/93‑1 (MQ=255)
                                        gcgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGt                                                  >  1:7686529/1‑93 (MQ=255)
                                         cgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTc                                                 >  1:2861171/1‑93 (MQ=255)
                                         cgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTc                                                 <  1:4626547/93‑1 (MQ=255)
                                         cgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTc                                                 >  1:3968753/1‑93 (MQ=255)
                                          gcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTcc                                                >  1:3205183/1‑93 (MQ=255)
                                          cccTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTcc                                                <  2:2857805/92‑1 (MQ=255)
                                           ccTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCg                                               >  2:4165821/1‑93 (MQ=255)
                                            cTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCgg                                              >  2:865722/1‑93 (MQ=255)
                                             tGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGt                                             >  1:6436141/1‑93 (MQ=255)
                                              gCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTc                                            >  2:1079813/1‑93 (MQ=255)
                                                ccACTTCAACACTTCAAACGCGATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTg                                          <  2:6678179/93‑1 (MQ=255)
                                                ccACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTg                                          >  2:13440/1‑93 (MQ=255)
                                                ccACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTg                                          >  1:2144850/1‑93 (MQ=255)
                                                 cacttcaacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGa                                         <  2:2019182/93‑1 (MQ=255)
                                                  acttcaacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGaa                                        <  1:1017261/93‑1 (MQ=255)
                                                  acttcaacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGaa                                        >  2:4504919/1‑93 (MQ=255)
                                                   cttcaacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAg                                       <  2:7618795/93‑1 (MQ=255)
                                                    ttcaacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGc                                      >  2:8573740/1‑93 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcc                                     <  2:5059192/93‑1 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcc                                     >  2:272671/1‑93 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcc                                     <  1:5578327/93‑1 (MQ=255)
                                                       aacacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCa                                   >  2:3007574/1‑93 (MQ=255)
                                                        acacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAg                                  >  2:2645301/1‑93 (MQ=255)
                                                         cacttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGc                                 >  2:4914132/1‑93 (MQ=255)
                                                          acttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCa                                >  2:594442/1‑93 (MQ=255)
                                                          acttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCa                                >  2:1741540/1‑93 (MQ=255)
                                                          acttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCa                                <  2:235088/93‑1 (MQ=255)
                                                           cttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCaa                               <  2:6354113/93‑1 (MQ=255)
                                                            ttcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAt                              >  2:687141/1‑93 (MQ=255)
                                                            ctcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAt                              <  1:5172700/92‑1 (MQ=255)
                                                             tcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATa                             <  1:163888/93‑1 (MQ=255)
                                                             tcaaACGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACAAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATa                             <  2:3781905/93‑1 (MQ=255)
                                                               aaaCGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGa                           <  2:5200877/93‑1 (MQ=255)
                                                                aaCGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAc                          >  1:3120103/1‑93 (MQ=255)
                                                                 aCGCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACg                         >  1:3282092/1‑93 (MQ=255)
                                                                   gCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGcc                       >  2:4438559/1‑93 (MQ=255)
                                                                   gCAATCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGcc                       >  1:3764047/1‑93 (MQ=255)
                                                                     aaTCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAc                     >  2:614135/1‑93 (MQ=255)
                                                                      aTCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAcc                    <  1:5416380/93‑1 (MQ=255)
                                                                       tCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccg                   >  1:115315/1‑93 (MQ=255)
                                                                       tCACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccg                   >  1:3520969/1‑93 (MQ=255)
                                                                        cACTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgc                  >  2:2517733/1‑93 (MQ=255)
                                                                          cTGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgc                >  1:1813311/1‑93 (MQ=255)
                                                                           tGAGCGGGAAAATAG‑CGTCCCCACCCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgcc               <  1:1430629/93‑1 (MQ=255)
                                                                           tGAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgcc               >  1:3849880/1‑93 (MQ=255)
                                                                            taGCGGAAAAATAGCCGC‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg              <  2:1601214/92‑1 (MQ=255)
                                                                            gAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg              >  2:8040181/1‑93 (MQ=255)
                                                                            gAGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg              >  1:8235030/1‑93 (MQ=255)
                                                                             aGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgc             >  1:6317384/1‑93 (MQ=255)
                                                                             aGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgc             <  1:5743179/93‑1 (MQ=255)
                                                                             aGCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgc             >  2:891166/1‑93 (MQ=255)
                                                                              gCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgcg            >  2:740942/1‑93 (MQ=255)
                                                                              gCGGGAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgcg            >  1:8046867/1‑93 (MQ=255)
                                                                                  gAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATaa        <  1:2794299/93‑1 (MQ=255)
                                                                                  gAAAATAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATaa        <  2:8439344/93‑1 (MQ=255)
                                                                                   aaaaTAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAc       <  1:3379251/93‑1 (MQ=255)
                                                                                    aaaTAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAcc      >  1:4190193/1‑93 (MQ=255)
                                                                                    aaaTAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAcc      <  2:5885453/93‑1 (MQ=255)
                                                                                      aTAG‑CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGt    <  1:7360549/93‑1 (MQ=255)
                                                                                              |                                                                                       
GGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAG‑CGT‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG  >  NC_000913/4006388‑4006567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 303 total aligned reads displayed.
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  NC_000913/4006390‑4006576
                                                                                               |                                                                                             
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CC                                                                                               >  SRR4302541.2907122/1‑94 (MQ=60)
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CC                                                                                               <  SRR4302541.8435957/94‑1 (MQ=60)
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CC                                                                                               >  SRR4302541.8160169/1‑94 (MQ=60)
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CC                                                                                               >  SRR4302541.1879652/1‑94 (MQ=60)
CCCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CC                                                                                               <  SRR4302541.7475579/94‑1 (MQ=60)
 GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCC                                                                                              >  SRR4302541.6876438/1‑94 (MQ=60)
 GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCC                                                                                              <  SRR4302541.2886203/94‑1 (MQ=60)
 GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCA                                                                                              >  SRR4302541.232003/1‑94 (MQ=60)
 CCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCC                                                                                              <  SRR4302541.2627398/94‑1 (MQ=60)
  CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCCA                                                                                             >  SRR4302541.8793291/1‑94 (MQ=60)
  CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCCA                                                                                             >  SRR4302541.3034656/1‑94 (MQ=60)
  CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCCA                                                                                             <  SRR4302541.7256033/94‑1 (MQ=60)
  CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCCA                                                                                             >  SRR4302541.3895475/1‑94 (MQ=60)
  CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCCA                                                                                             >  SRR4302541.4863804/1‑94 (MQ=60)
   GCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCcaa                                                                                            >  SRR4302541.3603806/1‑91 (MQ=60)
   GCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCcaa                                                                                            <  SRR4302541.5200964/94‑4 (MQ=60)
   GCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCAATTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCcaa                                                                                            >  SRR4302541.3171470/1‑91 (MQ=60)
    CCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAAC                                                                                            >  SRR4302541.8164804/1‑94 (MQ=60)
    CCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAAC                                                                                            <  SRR4302541.5366889/94‑1 (MQ=60)
    CCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAAC                                                                                            >  SRR4302541.4540592/1‑94 (MQ=60)
     CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACC                                                                                           >  SRR4302541.2590270/1‑94 (MQ=60)
     CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACC                                                                                           <  SRR4302541.7741024/94‑1 (MQ=60)
     CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACC                                                                                           >  SRR4302541.6188663/1‑94 (MQ=60)
     CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACC                                                                                           <  SRR4302541.7924259/94‑1 (MQ=60)
      CCTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCC                                                                                          <  SRR4302541.6037586/94‑1 (MQ=60)
      ACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCC                                                                                          >  SRR4302541.7959359/1‑94 (MQ=60)
       CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCC                                                                                         >  SRR4302541.188090/1‑94 (MQ=60)
       CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCC                                                                                         <  SRR4302541.6583590/94‑1 (MQ=60)
        TGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACTCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCA                                                                                        >  SRR4302541.3777690/1‑94 (MQ=60)
         GCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCAC                                                                                       >  SRR4302541.6089113/1‑94 (MQ=60)
         GCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCAC                                                                                       <  SRR4302541.3749320/94‑1 (MQ=60)
         GCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCAC                                                                                       <  SRR4302541.4361661/94‑1 (MQ=60)
         GCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCAC                                                                                       <  SRR4302541.536881/94‑1 (MQ=60)
          gttGATTCCCCGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCCCTGAGCGGGAAAATAGCGTCC‑CCAACCCCACG                                                                                      <  SRR4302541.6478016/91‑1 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACG                                                                                      <  SRR4302541.7718329/94‑1 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACG                                                                                      >  SRR4302541.3725318/1‑94 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACG                                                                                      >  SRR4302541.1623416/1‑94 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACG                                                                                      <  SRR4302541.1777715/94‑1 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACC                                                                                      >  SRR4302541.7641178/1‑94 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCCACCCCcaca                                                                                     >  SRR4302541.7598105/1‑90 (MQ=60)
           TGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGGAAATAGCGTCC‑CCAACCCAACGC                                                                                     >  SRR4302541.1790837/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCC                                                                                    >  SRR4302541.6185060/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCC                                                                                    >  SRR4302541.3530047/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCC                                                                                    >  SRR4302541.5692360/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCC                                                                                    >  SRR4302541.6524772/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCC                                                                                    >  SRR4302541.1160672/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCC                                                                                    >  SRR4302541.8018323/1‑94 (MQ=60)
             GATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCA                                                                                   >  SRR4302541.2675761/1‑94 (MQ=60)
             GATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCA                                                                                   <  SRR4302541.5089024/94‑1 (MQ=60)
               TTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAAC                                                                                 >  SRR4302541.5656563/1‑94 (MQ=60)
               TTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAAC                                                                                 <  SRR4302541.4861190/94‑1 (MQ=60)
                TCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACC                                                                                <  SRR4302541.6787647/94‑1 (MQ=60)
                TCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACC                                                                                <  SRR4302541.1195677/94‑1 (MQ=60)
                  CCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAG                                                                              >  SRR4302541.6004651/1‑94 (MQ=60)
                  CCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAG                                                                              >  SRR4302541.5065236/1‑94 (MQ=60)
                    AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCA                                                                            >  SRR4302541.7272186/1‑94 (MQ=60)
                    AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCA                                                                            <  SRR4302541.2445161/94‑1 (MQ=60)
                    AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCA                                                                            >  SRR4302541.5384222/1‑94 (MQ=60)
                    AGCCAAAACAAGTAAGCCGCGCCTGCCCCCTTCAACAATTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCA                                                                            <  SRR4302541.1956605/94‑1 (MQ=60)
                      CCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACA                                                                          <  SRR4302541.3533534/94‑1 (MQ=60)
                         AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302541.7878481/94‑1 (MQ=60)
                         AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302541.36822/94‑1 (MQ=60)
                          ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302541.1721320/94‑1 (MQ=60)
                            CAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGA                                                                    >  SRR4302541.4275631/1‑94 (MQ=60)
                             AAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAA                                                                   >  SRR4302541.8047446/1‑94 (MQ=60)
                             AAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAA                                                                   >  SRR4302541.3593076/1‑94 (MQ=60)
                              AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302541.2682548/94‑1 (MQ=60)
                              AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302541.2637584/94‑1 (MQ=60)
                              AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302541.8324473/94‑1 (MQ=60)
                              AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302541.3170526/94‑1 (MQ=60)
                               GTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATC                                                                 <  SRR4302541.4333806/94‑1 (MQ=60)
                               ATAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATC                                                                 <  SRR4302541.2058332/94‑1 (MQ=60)
                                TAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCG                                                                <  SRR4302541.2778891/94‑1 (MQ=60)
                                TAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCG                                                                <  SRR4302541.7208023/94‑1 (MQ=60)
                                  AGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCC                                                              <  SRR4302541.2248123/94‑1 (MQ=60)
                                   GCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCA                                                             <  SRR4302541.5852540/94‑1 (MQ=60)
                                     CGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGT                                                           <  SRR4302541.6727669/94‑1 (MQ=60)
                                     CGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGT                                                           >  SRR4302541.7768256/1‑94 (MQ=60)
                                     CGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGT                                                           <  SRR4302541.5816613/94‑1 (MQ=60)
                                     CGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGC                                                           >  SRR4302541.349322/1‑94 (MQ=60)
                                      GCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTC                                                          >  SRR4302541.4008152/1‑94 (MQ=60)
                                       CGCCTTCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACGATATGAATCGCCAGTCC                                                         <  SRR4302541.3392830/94‑1 (MQ=60)
                                       CGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCC                                                         >  SRR4302541.3281737/1‑94 (MQ=60)
                                       CGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCC                                                         <  SRR4302541.7393834/94‑1 (MQ=60)
                                       CGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCC                                                         <  SRR4302541.500105/94‑1 (MQ=60)
                                       CGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCC                                                         >  SRR4302541.3237563/1‑94 (MQ=60)
                                        GCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCG                                                        >  SRR4302541.3242914/1‑94 (MQ=60)
                                         CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       >  SRR4302541.220377/1‑94 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302541.4200874/1‑94 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302541.6501736/1‑94 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      <  SRR4302541.7685264/94‑1 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      <  SRR4302541.5709479/94‑1 (MQ=60)
                                           TGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTC                                                     >  SRR4302541.3133924/1‑94 (MQ=60)
                                           TGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTC                                                     >  SRR4302541.5748716/1‑94 (MQ=60)
                                           CGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTC                                                     >  SRR4302541.2778126/1‑94 (MQ=60)
                                            GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302541.8691174/94‑1 (MQ=60)
                                            GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302541.5373839/94‑1 (MQ=60)
                                            GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302541.1089801/94‑1 (MQ=60)
                                             CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   >  SRR4302541.2165597/1‑94 (MQ=60)
                                              CCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGA                                                  >  SRR4302541.3832343/1‑94 (MQ=60)
                                               CACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAA                                                 >  SRR4302541.5734294/1‑94 (MQ=60)
                                                ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                <  SRR4302541.1026663/94‑1 (MQ=60)
                                                ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                <  SRR4302541.1548664/94‑1 (MQ=60)
                                                ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                >  SRR4302541.33645/1‑94 (MQ=60)
                                                ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                <  SRR4302541.129801/94‑1 (MQ=60)
                                                 CTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGC                                               >  SRR4302541.8686705/1‑94 (MQ=60)
                                                 CTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGC                                               >  SRR4302541.6635407/1‑94 (MQ=60)
                                                   TCAACACTTCAAACGCAATCACTGAGCGGGAAATTAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCC                                             <  SRR4302541.8584897/94‑1 (MQ=60)
                                                   TCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCC                                             <  SRR4302541.5635432/94‑1 (MQ=60)
                                                   TCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCC                                             <  SRR4302541.7363146/94‑1 (MQ=60)
                                                   TCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCC                                             <  SRR4302541.6539874/94‑1 (MQ=60)
                                                    CAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTGCGGTCTGAAGCCCA                                            >  SRR4302541.7787786/1‑94 (MQ=60)
                                                    CAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCA                                            <  SRR4302541.5297482/94‑1 (MQ=60)
                                                    CAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCA                                            >  SRR4302541.2625254/1‑94 (MQ=60)
                                                    CAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCA                                            >  SRR4302541.4125339/1‑94 (MQ=60)
                                                    CAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCA                                            >  SRR4302541.6428104/1‑94 (MQ=60)
                                                     AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           >  SRR4302541.5704050/1‑94 (MQ=60)
                                                     AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGACCAG                                           >  SRR4302541.4896487/1‑94 (MQ=60)
                                                      ACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGC                                          >  SRR4302541.1141047/1‑94 (MQ=60)
                                                        ACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAA                                        >  SRR4302541.5679955/1‑94 (MQ=60)
                                                        ACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAA                                        >  SRR4302541.4717610/1‑94 (MQ=60)
                                                         CTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       <  SRR4302541.384202/94‑1 (MQ=60)
                                                         CTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       <  SRR4302541.2763396/94‑1 (MQ=60)
                                                           TCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAG                                     >  SRR4302541.5599700/1‑94 (MQ=60)
                                                           TCAAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAG                                     <  SRR4302541.165118/94‑1 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302541.2849434/94‑1 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302541.3274261/94‑1 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   >  SRR4302541.3151670/1‑94 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302541.8385234/94‑1 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302541.5494127/94‑1 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   >  SRR4302541.1831108/1‑94 (MQ=60)
                                                              AACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  >  SRR4302541.6497198/1‑94 (MQ=60)
                                                              AACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  >  SRR4302541.3315173/1‑94 (MQ=60)
                                                              AACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  <  SRR4302541.8361209/94‑1 (MQ=60)
                                                              AACGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  >  SRR4302541.3369745/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302541.3801854/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302541.1399513/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302541.2971861/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                <  SRR4302541.5168665/94‑1 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302541.47503/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                <  SRR4302541.404689/94‑1 (MQ=60)
                                                                 GCAATCACGGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCA                               <  SRR4302541.3029064/94‑1 (MQ=60)
                                                                  CAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              >  SRR4302541.4365690/1‑94 (MQ=60)
                                                                  CAATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              >  SRR4302541.4349631/1‑94 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302541.3078643/1‑94 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             <  SRR4302541.6026854/94‑1 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302541.3924792/1‑94 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGAACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302541.3078642/1‑94 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTAC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302541.4299572/1‑94 (MQ=60)
                                                                    ATCACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCG                            <  SRR4302541.5471940/94‑1 (MQ=60)
                                                                      CACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCG                          <  SRR4302541.8016123/94‑1 (MQ=60)
                                                                       ACTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGC                         >  SRR4302541.1830941/1‑94 (MQ=60)
                                                                        CTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCC                        >  SRR4302541.3888632/1‑94 (MQ=60)
                                                                        CTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCC                        <  SRR4302541.4420095/94‑1 (MQ=60)
                                                                        CTGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCC                        <  SRR4302541.8654712/94‑1 (MQ=60)
                                                                         TGAGCGGGAAAATAGCGTCC‑CCACCCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       <  SRR4302541.1444544/94‑1 (MQ=60)
                                                                         TGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       >  SRR4302541.2559863/1‑94 (MQ=60)
                                                                         TGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       >  SRR4302541.8324795/1‑94 (MQ=60)
                                                                         TGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       >  SRR4302541.4314380/1‑94 (MQ=60)
                                                                         TGAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       <  SRR4302541.2873777/94‑1 (MQ=60)
                                                                          GAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      >  SRR4302541.6381973/1‑94 (MQ=60)
                                                                          GAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      <  SRR4302541.4266007/94‑1 (MQ=60)
                                                                          GAGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      <  SRR4302541.8588751/94‑1 (MQ=60)
                                                                           AGCGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCG                     >  SRR4302541.8135348/1‑94 (MQ=60)
                                                                             CGGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAT                   <  SRR4302541.1805183/94‑1 (MQ=60)
                                                                              GGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  <  SRR4302541.52455/94‑1 (MQ=60)
                                                                              GGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  >  SRR4302541.1004367/1‑94 (MQ=60)
                                                                              GGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  >  SRR4302541.219724/1‑94 (MQ=60)
                                                                              GGGAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  <  SRR4302541.211037/94‑1 (MQ=60)
                                                                                GAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAC                <  SRR4302541.2822530/94‑1 (MQ=60)
                                                                                GAAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAC                >  SRR4302541.6930255/1‑94 (MQ=60)
                                                                                 AAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               <  SRR4302541.8645162/94‑1 (MQ=60)
                                                                                 AAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               >  SRR4302541.6642689/1‑94 (MQ=60)
                                                                                 AAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               >  SRR4302541.4231787/1‑94 (MQ=60)
                                                                                 AAAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               <  SRR4302541.3412937/94‑1 (MQ=60)
                                                                                  AAATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCG              >  SRR4302541.442642/1‑94 (MQ=60)
                                                                                    atagctgcC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302541.5472241/86‑1 (MQ=60)
                                                                                    ATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302541.7059452/94‑1 (MQ=60)
                                                                                    ATAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302541.3791726/94‑1 (MQ=60)
                                                                                    ATAGCGTCC‑CCAACCCCACGCAAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302541.7438932/94‑1 (MQ=60)
                                                                                     TAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           <  SRR4302541.424452/94‑1 (MQ=60)
                                                                                     TAGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           <  SRR4302541.3891617/94‑1 (MQ=60)
                                                                                      AGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGT          >  SRR4302541.915011/1‑94 (MQ=60)
                                                                                      AGCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGT          <  SRR4302541.721361/94‑1 (MQ=60)
                                                                                       GCGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTT         <  SRR4302541.6837907/94‑1 (MQ=60)
                                                                                       GCGT‑CACCAACCCCACGCGAACCAGCACAATATGACGCGCAAGTCCGGTCTGAAGCCCAGCAATAGACCCCACCGCGCCGCGATAACCGTGGTT         <  SRR4302541.5846375/94‑1 (MQ=60)
                                                                                        CGTCC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTG        >  SRR4302541.6840220/1‑94 (MQ=60)
                                                                                         gtcC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       >  SRR4302541.5786669/4‑94 (MQ=60)
                                                                                         gtcC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       <  SRR4302541.8830688/91‑1 (MQ=60)
                                                                                         gtcC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       <  SRR4302541.2673729/91‑1 (MQ=60)
                                                                                          tcC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAG      <  SRR4302541.7905273/92‑1 (MQ=60)
                                                                                          tcC‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAACAGACGCCACCGTGCCGCGATAACCGTGGTTTAG      >  SRR4302541.5276779/3‑94 (MQ=60)
                                                                                          C‑C‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     >  SRR4302541.8361926/1‑94 (MQ=60)
                                                                                          C‑C‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     >  SRR4302541.5778686/1‑94 (MQ=60)
                                                                                          C‑C‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGC     >  SRR4302541.7019/1‑94 (MQ=60)
                                                                                            C‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACTCCACCGCGCCGCGATAACCGTGGTTGAGCG    <  SRR4302541.1143687/94‑1 (MQ=60)
                                                                                            C‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCG    >  SRR4302541.2238912/1‑94 (MQ=60)
                                                                                            C‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCG    >  SRR4302541.1824913/1‑94 (MQ=60)
                                                                                               CAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  SRR4302541.3308401/1‑94 (MQ=60)
                                                                                               CAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  SRR4302541.5301349/1‑94 (MQ=60)
                                                                                               |                                                                                             
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑C‑CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  NC_000913/4006390‑4006576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑