Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,021,684 Δ1 bp coding (542/609 nt)|coding (1/243 nt) b4556 →
tatD →		 hypothetical protein
Mg‑dependent DNase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,021,6830C.99.8% 2504.4 / ‑4.2 537coding (541/609 nt)b4556hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base . (270/266);  total (271/266)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 592 total aligned reads displayed.

TTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACCGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTC  >  NC_000913/4021591‑4021771
                                                                                            |                                                                                        
ttcttcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACTGGTTGGGTTTGCGATGAAc                                                                                          >  1:4585479/1‑93 (MQ=255)
ttcttcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAAc                                                                                          <  2:7882540/93‑1 (MQ=255)
ttcttcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAAc                                                                                          <  1:2260256/93‑1 (MQ=255)
  cttcATTGCTTTACCGGTACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAAcgc                                                                                        >  2:7929393/1‑91 (MQ=255)
  cttcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAAcga                                                                                        <  2:2037390/93‑3 (MQ=255)
   ttcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAAcgac                                                                                       >  2:1871966/1‑90 (MQ=255)
    tcATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAAcgacg                                                                                      >  1:8392275/1‑89 (MQ=255)
     cATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAcgc                                                                                    <  1:4484950/93‑1 (MQ=255)
     cATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAcgc                                                                                    <  1:4024006/93‑1 (MQ=255)
     cATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAcgc                                                                                    <  1:3179192/93‑1 (MQ=255)
      aTTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAcgcg                                                                                   >  2:4001890/1‑93 (MQ=255)
       ttGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCgg                                                                                  <  2:2280976/93‑1 (MQ=255)
         gCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGAc                                                                                <  1:3307776/93‑1 (MQ=255)
         gCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGAc                                                                                <  2:5173044/93‑1 (MQ=255)
           tttACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTg                                                                              <  1:8713353/93‑1 (MQ=255)
           tttACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTg                                                                              <  1:4912289/93‑1 (MQ=255)
              aCCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGCAg                                                                           >  1:5323671/1‑93 (MQ=255)
               ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                          <  2:2134627/93‑1 (MQ=255)
               ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                          <  1:7384815/93‑1 (MQ=255)
               ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                          <  1:3782522/93‑1 (MQ=255)
               ccGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGc                                                                          <  2:4958599/93‑1 (MQ=255)
                cGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCt                                                                         <  1:4694702/93‑1 (MQ=255)
                      acGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGa                                                                   <  1:164904/93‑1 (MQ=255)
                       cgcgAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGaa                                                                  <  1:1128083/93‑1 (MQ=255)
                       cgcgAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGaa                                                                  >  1:3695846/1‑93 (MQ=255)
                         cgAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGGACt                                                                >  1:7887491/1‑93 (MQ=255)
                         cgAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACt                                                                >  2:8033299/1‑93 (MQ=255)
                          gAAGAGATGCAGGCGTTCGTGGCGCATGGGATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACtt                                                               <  1:2684536/93‑1 (MQ=255)
                          gAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACtt                                                               >  1:1973851/1‑93 (MQ=255)
                          gAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACtt                                                               >  2:4728213/1‑93 (MQ=255)
                           aaGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAAAttt                                                              >  2:2363521/1‑93 (MQ=255)
                            agagATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACtttt                                                             >  2:6900691/1‑93 (MQ=255)
                             gagaTGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTg                                                            <  2:8714571/93‑1 (MQ=255)
                               gaTGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGcc                                                          >  2:3362875/1‑93 (MQ=255)
                                aTGCAGGCGTGCGTGGCGCATGGAATTTATATCTGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCg                                                         >  1:7951479/1‑93 (MQ=255)
                                  gCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGtt                                                       <  2:8510404/93‑1 (MQ=255)
                                  gCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGtt                                                       >  2:924155/1‑93 (MQ=255)
                                   cAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTg                                                      <  2:4379637/93‑1 (MQ=255)
                                     ggCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGAt                                                    <  1:3908192/93‑1 (MQ=255)
                                      gcgtgcgtGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGAtt                                                   <  1:6476518/93‑1 (MQ=255)
                                       cgtgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTc                                                  <  1:4770334/93‑1 (MQ=255)
                                        gtgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTcc                                                 >  1:1493823/1‑93 (MQ=255)
                                        gtgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTcc                                                 >  1:6707551/1‑93 (MQ=255)
                                        gtgcgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTcc                                                 >  1:5035382/1‑93 (MQ=255)
                                           cgtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggc                                              >  1:2364883/1‑93 (MQ=255)
                                            gtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcg                                             >  1:257253/1‑93 (MQ=255)
                                            gtgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcg                                             >  2:4167547/1‑93 (MQ=255)
                                             tgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcgg                                            <  1:7477543/93‑1 (MQ=255)
                                             tgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcgg                                            <  2:154331/93‑1 (MQ=255)
                                             tgGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCcggcgg                                            >  1:1322309/1‑93 (MQ=255)
                                              ggCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGa                                           >  1:8799199/1‑93 (MQ=255)
                                              ggCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACACGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGa                                           >  2:6273103/1‑93 (MQ=255)
                                                cgcATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaa                                         >  1:714502/1‑93 (MQ=255)
                                                 gcATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaa                                        >  1:7778715/1‑93 (MQ=255)
                                                 gcATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaa                                        >  1:2205090/1‑93 (MQ=255)
                                                  cATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaaa                                       >  1:3126680/1‑93 (MQ=255)
                                                  cATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGaaaaa                                       >  1:4385502/1‑93 (MQ=255)
                                                   aTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                      >  1:8594658/1‑93 (MQ=255)
                                                   aTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                      >  1:1823466/1‑93 (MQ=255)
                                                   aTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                      <  1:1225929/93‑1 (MQ=255)
                                                   aTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAt                                      >  2:6023484/1‑93 (MQ=255)
                                                   aTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCAGTTGATTCAGGCGGAAAAAt                                      >  2:5353579/1‑93 (MQ=255)
                                                      gAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTAc                                   <  2:5662805/93‑1 (MQ=255)
                                                      gAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTAc                                   <  1:5636587/93‑1 (MQ=255)
                                                       aaTTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACt                                  <  2:5102286/93‑1 (MQ=255)
                                                        aTTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTg                                 <  2:7106147/93‑1 (MQ=255)
                                                        aTTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTg                                 >  2:2982023/1‑93 (MQ=255)
                                                         tttATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGa                                >  1:3592508/1‑93 (MQ=255)
                                                         tttATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGa                                >  1:5245967/1‑93 (MQ=255)
                                                         tttATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGa                                <  2:354085/93‑1 (MQ=255)
                                                           tataTCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc                              >  2:6586775/1‑93 (MQ=255)
                                                           tataTCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc                              <  2:4518406/93‑1 (MQ=255)
                                                           tataTCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc                              >  2:8305225/1‑93 (MQ=255)
                                                           tataTCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc                              >  1:989860/1‑93 (MQ=255)
                                                           tataTCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATc                              <  1:1003829/93‑1 (MQ=255)
                                                            atatCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCg                             >  2:6451052/1‑93 (MQ=255)
                                                                  gCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTg                       <  1:6426153/93‑1 (MQ=255)
                                                                    cttACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAt                     <  2:7359292/92‑1 (MQ=255)
                                                                     ttACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATg                    >  1:8235482/1‑93 (MQ=255)
                                                                     ttACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATg                    <  2:8758116/93‑1 (MQ=255)
                                                                      tACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgc                   <  2:2615114/93‑1 (MQ=255)
                                                                      tACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgc                   >  2:3195052/1‑93 (MQ=255)
                                                                       tccGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgcg                  <  2:5845717/92‑1 (MQ=255)
                                                                       aCCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgcg                  >  2:1690741/1‑93 (MQ=255)
                                                                        ccGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgcgc                 >  1:5903945/1‑93 (MQ=255)
                                                                        ccGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATgcgc                 <  2:2742184/93‑1 (MQ=255)
                                                                          ggTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCg               >  1:6171776/1‑93 (MQ=255)
                                                                           gTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGt              >  2:7704507/1‑93 (MQ=255)
                                                                            ttGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTa             <  2:3660299/93‑1 (MQ=255)
                                                                             tGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTAt            <  1:4152941/93‑1 (MQ=255)
                                                                              gggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATc           <  2:555821/93‑1 (MQ=255)
                                                                              gggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATc           <  1:2964768/93‑1 (MQ=255)
                                                                              gggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATc           <  2:6781698/93‑1 (MQ=255)
                                                                               ggTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCt          <  1:6940389/93‑1 (MQ=255)
                                                                                gTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTGGCCGTTGATTCCGGCGGAAAAATTACTACTCGAAAAGGAGGCGCCGTATcgg         >  1:2093517/1‑91 (MQ=255)
                                                                                    gCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTcc     >  2:1356826/1‑93 (MQ=255)
                                                                                      gATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCt   <  2:244760/93‑1 (MQ=255)
                                                                                       aTGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTc  <  1:5519423/93‑1 (MQ=255)
                                                                                       aTGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTc  <  2:2907790/93‑1 (MQ=255)
                                                                                       aTGAA‑CGACACGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTc  <  2:7039502/93‑1 (MQ=255)
                                                                                            |                                                                                        
TTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACCGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTC  >  NC_000913/4021591‑4021771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 318 total aligned reads displayed.
TTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACCGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCGATC  >  NC_000913/4021591‑4021777
                                                                                             |                                                                                             
TTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACG                                                                                               <  SRR4302541.2282078/94‑1 (MQ=60)
TTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACG                                                                                               >  SRR4302541.216891/1‑94 (MQ=60)
TTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACG                                                                                               >  SRR4302541.7171284/1‑94 (MQ=60)
  CTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAC                                                                                            <  SRR4302541.2579934/94‑1 (MQ=60)
  CTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAC                                                                                            <  SRR4302541.7960401/94‑1 (MQ=60)
  CTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGGGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGAC                                                                                            <  SRR4302541.1584327/94‑1 (MQ=60)
   TTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACG                                                                                           <  SRR4302541.2448884/94‑1 (MQ=60)
   TTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACG                                                                                           <  SRR4302541.5398533/94‑1 (MQ=60)
     CATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCG                                                                                         <  SRR4302541.3329541/94‑1 (MQ=60)
     CATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCG                                                                                         <  SRR4302541.475203/94‑1 (MQ=60)
     CATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCG                                                                                         <  SRR4302541.4530157/94‑1 (MQ=60)
     CATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGAGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCG                                                                                         <  SRR4302541.4716159/94‑1 (MQ=60)
     AATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCG                                                                                         <  SRR4302541.5316421/94‑1 (MQ=60)
      ATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGG                                                                                        >  SRR4302541.4959646/1‑94 (MQ=60)
      ATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGG                                                                                        >  SRR4302541.1956200/1‑94 (MQ=60)
      ATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGG                                                                                        <  SRR4302541.2148369/94‑1 (MQ=60)
      ATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGG                                                                                        <  SRR4302541.233678/94‑1 (MQ=60)
         GCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACT                                                                                     <  SRR4302541.3341002/94‑1 (MQ=60)
         GCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACT                                                                                     <  SRR4302541.5057190/94‑1 (MQ=60)
           TTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGG                                                                                   >  SRR4302541.4806129/1‑94 (MQ=60)
           TTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGG                                                                                   <  SRR4302541.8806564/94‑1 (MQ=60)
           TTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGG                                                                                   <  SRR4302541.4962418/94‑1 (MQ=60)
           TTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGG                                                                                   >  SRR4302541.7264141/1‑94 (MQ=60)
             TACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGCAG                                                                                 >  SRR4302541.5378459/1‑94 (MQ=60)
              ACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGC                                                                                <  SRR4302541.2628066/94‑1 (MQ=60)
              ACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGC                                                                                >  SRR4302541.2463049/1‑94 (MQ=60)
               CCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCT                                                                               <  SRR4302541.7463766/94‑1 (MQ=60)
               CCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCT                                                                               >  SRR4302541.1141782/1‑94 (MQ=60)
               CCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCT                                                                               <  SRR4302541.3820523/94‑1 (MQ=60)
               CCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCT                                                                               <  SRR4302541.7494000/94‑1 (MQ=60)
               CCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCT                                                                               <  SRR4302541.1100250/94‑1 (MQ=60)
                CGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTG                                                                              >  SRR4302541.1938730/1‑94 (MQ=60)
                 GGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGG                                                                             >  SRR4302541.2235806/1‑94 (MQ=60)
                 GGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGC                                                                             <  SRR4302541.3273962/94‑1 (MQ=60)
                 GGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGC                                                                             <  SRR4302541.4442803/94‑1 (MQ=60)
                 GGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGC                                                                             >  SRR4302541.3342731/1‑94 (MQ=60)
                  GCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCG                                                                            <  SRR4302541.4081831/94‑1 (MQ=60)
                   CACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGG                                                                           <  SRR4302541.8493682/94‑1 (MQ=60)
                   CACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGG                                                                           >  SRR4302541.8021719/1‑94 (MQ=60)
                     CACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTTCGATGAA‑CGACGCGGACTGGAGCTGCGGGA                                                                         >  SRR4302541.1560754/1‑94 (MQ=60)
                      ACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAA                                                                        >  SRR4302541.3733219/1‑94 (MQ=60)
                      ACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAA                                                                        <  SRR4302541.5332653/94‑1 (MQ=60)
                       CGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAAC                                                                       <  SRR4302541.1138737/94‑1 (MQ=60)
                        GCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTAGCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACT                                                                      <  SRR4302541.6541004/94‑1 (MQ=60)
                        GCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACGGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACT                                                                      <  SRR4302541.3160195/94‑1 (MQ=60)
                        GCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACT                                                                      >  SRR4302541.4155554/1‑94 (MQ=60)
                         CGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGGACTT                                                                     >  SRR4302541.4717425/1‑94 (MQ=60)
                         CGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTT                                                                     >  SRR4302541.3783706/1‑94 (MQ=60)
                         CGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTT                                                                     >  SRR4302541.8030391/1‑94 (MQ=60)
                         CGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTT                                                                     <  SRR4302541.7746073/94‑1 (MQ=60)
                         CGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTT                                                                     <  SRR4302541.4022188/94‑1 (MQ=60)
                         CGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTT                                                                     >  SRR4302541.1787776/1‑94 (MQ=60)
                          GAAGAGATGCAGGCGTTCGTGGCGCATGGGATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTT                                                                    <  SRR4302541.2711203/94‑1 (MQ=60)
                          GAAGAGATGCAGGCGTGCGTGGCGCGTGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTT                                                                    >  SRR4302541.3953021/1‑94 (MQ=60)
                           AAGAGATGCAGGTGTGCGTGGCGTATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTT                                                                   <  SRR4302541.6844894/94‑1 (MQ=60)
                           AAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCTGCATTACCGGTTAGGTTTGCGATGAA‑CGACGCGGACGGGACCTGCGGGAACTTTT                                                                   >  SRR4302541.2799260/1‑94 (MQ=60)
                           AAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTT                                                                   <  SRR4302541.3165783/94‑1 (MQ=60)
                            AGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTG                                                                  >  SRR4302541.7603439/1‑94 (MQ=60)
                               GATGCAGGCGTGCGTGGCGCATGGAATTTATATCTGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCG                                                               >  SRR4302541.8039088/1‑94 (MQ=60)
                                ATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGT                                                              >  SRR4302541.8125513/1‑94 (MQ=60)
                                ATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGT                                                              >  SRR4302541.5130194/1‑94 (MQ=60)
                                 TGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTT                                                             <  SRR4302541.3962459/94‑1 (MQ=60)
                                 TGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTT                                                             <  SRR4302541.1784819/94‑1 (MQ=60)
                                  GCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTG                                                            <  SRR4302541.1717249/94‑1 (MQ=60)
                                  GCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGGTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGCAACTTTTGCCGTTG                                                            >  SRR4302541.4250969/1‑94 (MQ=60)
                                   CAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGA                                                           >  SRR4302541.6684159/1‑94 (MQ=60)
                                   CAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTGGCCGTTGA                                                           >  SRR4302541.3148406/1‑94 (MQ=60)
                                    AGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGAT                                                          >  SRR4302541.8350940/1‑94 (MQ=60)
                                    AGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGAT                                                          >  SRR4302541.7139031/1‑94 (MQ=60)
                                    AGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGAT                                                          <  SRR4302541.1256999/94‑1 (MQ=60)
                                    AGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGAT                                                          >  SRR4302541.6541758/1‑94 (MQ=60)
                                     GGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATT                                                         >  SRR4302541.6644338/1‑94 (MQ=60)
                                     GGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATT                                                         <  SRR4302541.7495889/94‑1 (MQ=60)
                                      GCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTC                                                        <  SRR4302541.2260688/94‑1 (MQ=60)
                                       CGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCC                                                       >  SRR4302541.6778394/1‑94 (MQ=60)
                                       CGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCC                                                       <  SRR4302541.4819041/94‑1 (MQ=60)
                                       CGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCC                                                       <  SRR4302541.5176327/94‑1 (MQ=60)
                                       CGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCC                                                       >  SRR4302541.1508566/1‑94 (MQ=60)
                                       CGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCC                                                       >  SRR4302541.4442755/1‑94 (MQ=60)
                                       CGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCC                                                       <  SRR4302541.8834365/94‑1 (MQ=60)
                                       CGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCC                                                       >  SRR4302541.5697685/1‑94 (MQ=60)
                                        GTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCG                                                      >  SRR4302541.4590076/1‑94 (MQ=60)
                                        GTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCG                                                      <  SRR4302541.4904234/94‑1 (MQ=60)
                                         TGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGG                                                     <  SRR4302541.5330892/94‑1 (MQ=60)
                                         TGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGG                                                     <  SRR4302541.835724/94‑1 (MQ=60)
                                          GCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGC                                                    >  SRR4302541.2387938/1‑94 (MQ=60)
                                          GCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGCTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGC                                                    <  SRR4302541.1218283/94‑1 (MQ=60)
                                           CGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTGTTCGATGAA‑CGACACGTACTGGAGCTTCGGGGACTTTTGCCGCTGATTtttgcg                                                   >  SRR4302541.4810697/1‑88 (MQ=48)
                                            GTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGG                                                  >  SRR4302541.7406702/1‑94 (MQ=60)
                                            GTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTGTTGCCGTTGATTCCGGCGG                                                  >  SRR4302541.7886242/1‑94 (MQ=60)
                                             TGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGA                                                 >  SRR4302541.2626835/1‑94 (MQ=60)
                                             TGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGA                                                 >  SRR4302541.5762036/1‑94 (MQ=60)
                                             TGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGA                                                 >  SRR4302541.5680625/1‑94 (MQ=60)
                                             TGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGA                                                 <  SRR4302541.1880451/94‑1 (MQ=60)
                                              GGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGTTTCCGGCGGAA                                                >  SRR4302541.6065664/1‑94 (MQ=60)
                                              GGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAA                                                >  SRR4302541.3653225/1‑94 (MQ=60)
                                              GGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAA                                                >  SRR4302541.3179492/1‑94 (MQ=60)
                                               GCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAA                                               >  SRR4302541.721242/1‑94 (MQ=60)
                                                CGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGTACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              <  SRR4302541.5185491/94‑1 (MQ=60)
                                                CGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              <  SRR4302541.3845483/94‑1 (MQ=60)
                                                CGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              >  SRR4302541.7861469/1‑94 (MQ=60)
                                                CGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              >  SRR4302541.1396335/1‑94 (MQ=60)
                                                CGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              <  SRR4302541.1255449/94‑1 (MQ=60)
                                                CGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              >  SRR4302541.5733826/1‑94 (MQ=60)
                                                CGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              >  SRR4302541.948912/1‑94 (MQ=60)
                                                CGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              >  SRR4302541.1428740/1‑94 (MQ=60)
                                                CGCATGGAATTTATATAGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAA                                              >  SRR4302541.2055194/1‑94 (MQ=60)
                                                 GCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAA                                             >  SRR4302541.1634532/1‑94 (MQ=60)
                                                 GCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAA                                             >  SRR4302541.3741290/1‑94 (MQ=60)
                                                 GCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAA                                             >  SRR4302541.3641159/1‑94 (MQ=60)
                                                 GCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAA                                             >  SRR4302541.4143103/1‑94 (MQ=60)
                                                 GCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACACGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAA                                             >  SRR4302541.6533655/1‑94 (MQ=60)
                                                 GCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACACGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAA                                             >  SRR4302541.601779/1‑94 (MQ=60)
                                                 GCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACACGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAA                                             >  SRR4302541.22717/1‑94 (MQ=60)
                                                  CATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAT                                            >  SRR4302541.8686872/1‑94 (MQ=60)
                                                  CATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAT                                            >  SRR4302541.8686873/1‑94 (MQ=60)
                                                  CATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAT                                            >  SRR4302541.1841168/1‑94 (MQ=60)
                                                  CATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAT                                            >  SRR4302541.1147721/1‑94 (MQ=60)
                                                  CATGGAATTTATATCGGCATTACCGCTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAAT                                            >  SRR4302541.6299313/1‑94 (MQ=60)
                                                   ATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATT                                           >  SRR4302541.3708547/1‑94 (MQ=60)
                                                   ATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATT                                           <  SRR4302541.1237959/94‑1 (MQ=60)
                                                    TGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTA                                          <  SRR4302541.232480/94‑1 (MQ=60)
                                                      GAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCNTTGATTCCGGCGGAAAAATTACT                                        >  SRR4302541.4017128/1‑94 (MQ=60)
                                                       AATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTG                                       <  SRR4302541.8889134/94‑1 (MQ=60)
                                                       AATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTG                                       <  SRR4302541.1131088/94‑1 (MQ=60)
                                                       AATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTG                                       <  SRR4302541.1288535/94‑1 (MQ=60)
                                                       AATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTG                                       <  SRR4302541.7871485/94‑1 (MQ=60)
                                                       AATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTG                                       <  SRR4302541.4903565/94‑1 (MQ=60)
                                                        ATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGA                                      >  SRR4302541.4358698/1‑94 (MQ=60)
                                                        ATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGA                                      >  SRR4302541.3628934/1‑94 (MQ=60)
                                                        ATTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGA                                      >  SRR4302541.5300018/1‑94 (MQ=60)
                                                         TTTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGAT                                     <  SRR4302541.6554986/94‑1 (MQ=60)
                                                          TTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATC                                    <  SRR4302541.2927689/94‑1 (MQ=60)
                                                          TTATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATC                                    >  SRR4302541.5074179/1‑94 (MQ=60)
                                                           TATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCG                                   <  SRR4302541.1013148/94‑1 (MQ=60)
                                                           TATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCG                                   >  SRR4302541.5629369/1‑94 (MQ=60)
                                                           TATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCG                                   >  SRR4302541.3922103/1‑94 (MQ=60)
                                                           TATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCG                                   <  SRR4302541.2222820/94‑1 (MQ=60)
                                                            ATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGA                                  >  SRR4302541.5420745/1‑94 (MQ=60)
                                                            ATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGA                                  >  SRR4302541.3200491/1‑94 (MQ=60)
                                                            ATATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGA                                  <  SRR4302541.1672171/94‑1 (MQ=60)
                                                             TATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGGACTTTTtgcgtttgtttccgggggaaaaataattgtttga                                 >  SRR4302541.8899087/1‑60 (MQ=60)
                                                             TATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAA                                 <  SRR4302541.5475348/94‑1 (MQ=60)
                                                              ATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAA                                <  SRR4302541.8770977/94‑1 (MQ=60)
                                                              ATCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAA                                >  SRR4302541.8896934/1‑94 (MQ=60)
                                                               TCGGCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAAC                               <  SRR4302541.3018041/94‑1 (MQ=60)
                                                                CGGCATTGCCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACT                              <  SRR4302541.7438301/94‑1 (MQ=60)
                                                                  GCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGA                            <  SRR4302541.3924416/94‑1 (MQ=60)
                                                                  GCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGA                            <  SRR4302541.6491664/94‑1 (MQ=60)
                                                                  GCATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGA                            <  SRR4302541.3505346/94‑1 (MQ=60)
                                                                   CATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGTACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAT                           >  SRR4302541.5857248/1‑94 (MQ=60)
                                                                   CATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAT                           <  SRR4302541.800868/94‑1 (MQ=60)
                                                                   CATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAT                           >  SRR4302541.2091016/1‑94 (MQ=60)
                                                                   CATTACCGGTTGGGTTTGCAATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGAT                           <  SRR4302541.8594128/94‑1 (MQ=60)
                                                                    ATTACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATG                          >  SRR4302541.8325251/1‑94 (MQ=60)
                                                                      TACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCG                        <  SRR4302541.6916211/94‑1 (MQ=60)
                                                                      TACCGGTTGCGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCG                        <  SRR4302541.2113420/94‑1 (MQ=60)
                                                                       TCCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGC                       <  SRR4302541.4465670/94‑1 (MQ=60)
                                                                       ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGC                       >  SRR4302541.7532904/1‑94 (MQ=60)
                                                                       ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGC                       >  SRR4302541.2283399/1‑94 (MQ=60)
                                                                       ACCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGC                       >  SRR4302541.8201867/1‑94 (MQ=60)
                                                                        CCGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGACAAATTACTGATCGAAACTGATGCGCC                      >  SRR4302541.3302628/1‑94 (MQ=60)
                                                                         CGGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCG                     >  SRR4302541.3092097/1‑94 (MQ=60)
                                                                          GGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGT                    >  SRR4302541.5028426/1‑94 (MQ=60)
                                                                          GGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGT                    >  SRR4302541.6424102/1‑94 (MQ=60)
                                                                          GGTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATCCGCCGT                    >  SRR4302541.1090720/1‑94 (MQ=60)
                                                                           GTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTA                   <  SRR4302541.4263574/94‑1 (MQ=60)
                                                                           GTTGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTA                   >  SRR4302541.2104776/1‑94 (MQ=60)
                                                                             TGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATC                 <  SRR4302541.8770432/94‑1 (MQ=60)
                                                                             TGGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATC                 <  SRR4302541.4194010/94‑1 (MQ=60)
                                                                              GGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCT                <  SRR4302541.7403947/94‑1 (MQ=60)
                                                                              GGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCT                <  SRR4302541.8415440/94‑1 (MQ=60)
                                                                              GGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCT                >  SRR4302541.473088/1‑94 (MQ=60)
                                                                              GGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCT                >  SRR4302541.689192/1‑94 (MQ=60)
                                                                              GGGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCT                <  SRR4302541.6299843/94‑1 (MQ=60)
                                                                               GGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTG               <  SRR4302541.972790/94‑1 (MQ=60)
                                                                               GGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTG               <  SRR4302541.6111867/94‑1 (MQ=60)
                                                                               GGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTG               <  SRR4302541.7014416/94‑1 (MQ=60)
                                                                               GGTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTGGCCGTTGATTCCGGCGGAAAAATTACTactcgaaaaggaggcgccgtatcgg               >  SRR4302541.2113808/1‑69 (MQ=60)
                                                                                GTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGC              >  SRR4302541.462776/1‑94 (MQ=60)
                                                                                GTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGC              <  SRR4302541.4545118/94‑1 (MQ=60)
                                                                                GTTTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTCATTCCGGCGGAAAAATTACTGATCGAAACTGATGCCCCGTATCTGC              >  SRR4302541.2785146/1‑94 (MQ=60)
                                                                                  TTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTC            <  SRR4302541.8056972/94‑1 (MQ=60)
                                                                                  TTGCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTC            >  SRR4302541.5665723/1‑94 (MQ=60)
                                                                                    GCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCC          >  SRR4302541.4800798/1‑94 (MQ=60)
                                                                                    GCGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACGGATGCGCCGTATCTGCTCCC          <  SRR4302541.8627946/94‑1 (MQ=60)
                                                                                     CGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCT         >  SRR4302541.8761878/1‑94 (MQ=60)
                                                                                     CGATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCC         >  SRR4302541.1454456/1‑94 (MQ=60)
                                                                                      GATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTC        <  SRR4302541.7580426/94‑1 (MQ=60)
                                                                                      GATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTC        <  SRR4302541.190397/94‑1 (MQ=60)
                                                                                      GATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTC        <  SRR4302541.7697704/94‑1 (MQ=60)
                                                                                       ATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCG       <  SRR4302541.3745596/94‑1 (MQ=60)
                                                                                       ATGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCG       <  SRR4302541.5575921/94‑1 (MQ=60)
                                                                                        TGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCTGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGC      <  SRR4302541.2916846/94‑1 (MQ=60)
                                                                                        TGAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAATTTACTGATCGAAACTGATGCGCCGTATCTGCCCCCTCcg      >  SRR4302541.917249/1‑92 (MQ=60)
                                                                                         GAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCG     <  SRR4302541.8416540/94‑1 (MQ=60)
                                                                                         GAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCG     >  SRR4302541.793501/1‑94 (MQ=60)
                                                                                         GAA‑CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCG     >  SRR4302541.7082150/1‑94 (MQ=60)
                                                                                             CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCGATC  >  SRR4302541.4148451/1‑94 (MQ=60)
                                                                                             CGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCGATC  >  SRR4302541.2402566/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACCGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCGATC  >  NC_000913/4021591‑4021777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑