Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,026,252 2 bp→GC coding (110‑111/1164 nt) fadA ← thiolase I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,026,2520CG100.0% 1663.3 / NA 485T37S (ACG→AGC) fadAthiolase I
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (228/257);  total (228/257)
*NC_0009134,026,2530GC100.0% 1660.8 / NA 489T37S (ACG→AGC) fadAthiolase I
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (229/260);  total (229/260)

Only 100 of 516 total aligned reads displayed.

AAAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGCGTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCA  >  NC_000913/4026165‑4026339
                                                                                       ||                                                                                      
  accccTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCa                                                                                  <  1:5160903/91‑1 (MQ=255)
  aaCCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCCCCAGCAGGCTACGCa                                                                                  >  2:2316824/1‑93 (MQ=255)
   aCCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGGTACGCGCCAGCAGGCTACGCAt                                                                                 >  2:1330913/1‑93 (MQ=255)
    cccTGCTCCAGCGTCTGCTGCACACACCCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCAtt                                                                                <  1:1966814/93‑1 (MQ=255)
    cccTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCAtt                                                                                <  2:7944283/93‑1 (MQ=255)
     ccTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTa                                                                               <  2:7813703/93‑1 (MQ=255)
     ccTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTa                                                                               >  1:7260180/1‑93 (MQ=255)
     ccTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATAGCGTCGAGGGGCGCCGCTTCCAGCGCCGGGGTACGCGCCAGCACGGTAGGCAGTa                                                                               >  2:6764337/1‑93 (MQ=255)
      cTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTaa                                                                              >  2:337262/1‑93 (MQ=255)
      cTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTaa                                                                              >  1:6273589/1‑93 (MQ=255)
      cTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTaa                                                                              <  1:5510664/93‑1 (MQ=255)
       tGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTaaa                                                                             <  2:6522089/93‑1 (MQ=255)
       tGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGCTACGCGCCAGCAGGCGACGCACTaaa                                                                             >  2:5009512/1‑93 (MQ=255)
        gCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAAt                                                                            <  1:6738194/93‑1 (MQ=255)
         cTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATg                                                                           <  1:6120972/93‑1 (MQ=255)
          tCCGGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGa                                                                          <  1:3633450/93‑1 (MQ=255)
          tCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTCAATGa                                                                          >  1:3534637/1‑93 (MQ=255)
          cccAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGa                                                                          <  1:4278519/92‑1 (MQ=255)
            cAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAgg                                                                        >  2:6901891/1‑92 (MQ=255)
            cAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGc                                                                        <  2:4442822/93‑1 (MQ=255)
            cAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGc                                                                        <  1:6878146/93‑1 (MQ=255)
            cAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGc                                                                        >  1:8125742/1‑93 (MQ=255)
             aGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCg                                                                       <  2:1573716/93‑1 (MQ=255)
              gCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGGGCCGGGTTACGCGCCACCAGGCTACGCATTAAATGAGCgg                                                                      >  1:6500263/1‑93 (MQ=255)
               cGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGga                                                                     <  2:8182368/93‑1 (MQ=255)
                 tCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgagg                                                                   >  1:1755827/1‑92 (MQ=255)
                 tCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgaga                                                                   >  2:858200/1‑93 (MQ=255)
                 tCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgaga                                                                   <  2:5099080/93‑1 (MQ=255)
                   tgctgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgagaga                                                                 >  2:4761189/1‑93 (MQ=255)
                   tgctgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGgagaga                                                                 <  2:7403541/93‑1 (MQ=255)
                    gctgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAt                                                                >  1:1223515/1‑93 (MQ=255)
                    gctgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCACCAGGCTACGCACTAAATCAGCGGAGAGAt                                                                >  2:6799253/1‑93 (MQ=255)
                     ctgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtc                                                               <  2:7139382/93‑1 (MQ=255)
                      tgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtct                                                              <  1:3949125/93‑1 (MQ=255)
                      tgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtct                                                              >  2:7058360/1‑93 (MQ=255)
                      tgcACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtct                                                              >  1:8031864/1‑93 (MQ=255)
                        cacacaACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtcttc                                                            <  2:3574415/93‑1 (MQ=255)
                         acacaACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAtcttct                                                           >  2:6139004/1‑93 (MQ=255)
                          cacaACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTg                                                          >  1:8527478/1‑93 (MQ=255)
                          cacaACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTg                                                          >  1:8703422/1‑93 (MQ=255)
                           acaACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgc                                                         >  2:841752/1‑93 (MQ=255)
                            cacccccAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgca                                                        <  1:3388087/90‑1 (MQ=255)
                             acccccAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgcac                                                       <  2:7588896/91‑1 (MQ=255)
                               ccccAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgcacgc                                                     >  1:3030886/1‑93 (MQ=255)
                                cccAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgcacgca                                                    >  1:7637653/1‑93 (MQ=255)
                                 ccAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgcacgcac                                                   >  1:2449376/1‑93 (MQ=255)
                                 ccAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTgcacgcac                                                   <  2:5209642/93‑1 (MQ=255)
                                   aGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGt                                                 >  2:4005467/1‑93 (MQ=255)
                                    gTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGtt                                                >  2:8273916/1‑93 (MQ=255)
                                       aaTATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACg                                             <  2:1467605/93‑1 (MQ=255)
                                           tcgtcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGaaaa                                         <  2:7663795/93‑1 (MQ=255)
                                           tcgtcgAGGGCCGCCACTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGaaaa                                         <  2:3898947/93‑1 (MQ=255)
                                            cgtcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAg                                        <  2:1824058/93‑1 (MQ=255)
                                            cgtcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAg                                        >  2:5332065/1‑93 (MQ=255)
                                             gtcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGc                                       >  1:2106956/1‑93 (MQ=255)
                                             gtcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGc                                       <  1:2629681/93‑1 (MQ=255)
                                              tcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCa                                      <  2:5419671/93‑1 (MQ=255)
                                              tcgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCa                                      <  1:8317066/93‑1 (MQ=255)
                                               cgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCAc                                     <  1:6978508/93‑1 (MQ=255)
                                               cgAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCAc                                     <  1:4030068/93‑1 (MQ=255)
                                                gAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCAcc                                    >  2:5754373/1‑93 (MQ=255)
                                                gAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCAcc                                    <  2:2887760/93‑1 (MQ=255)
                                                 aGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCg                                   >  1:4974192/1‑93 (MQ=255)
                                                  gggCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGc                                  >  1:2777383/1‑93 (MQ=255)
                                                    gccgccGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGccc                                <  1:7124373/93‑1 (MQ=255)
                                                      cgccgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCtt                              <  1:2279554/93‑1 (MQ=255)
                                                        ccgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCg                            >  1:7928449/1‑93 (MQ=255)
                                                         cgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGa                           >  1:1005066/1‑93 (MQ=255)
                                                         cgcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGa                           <  2:8725067/93‑1 (MQ=255)
                                                          gcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGaa                          >  1:2846213/1‑93 (MQ=255)
                                                          gcTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGaa                          >  1:3907728/1‑93 (MQ=255)
                                                           cTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAAc                         <  1:3154312/93‑1 (MQ=255)
                                                           cTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAAc                         >  1:492885/1‑93 (MQ=255)
                                                           cTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAAc                         <  1:5754790/93‑1 (MQ=255)
                                                             tCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACgg                       >  2:4152001/1‑93 (MQ=255)
                                                              ccAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGc                      >  2:1100068/1‑93 (MQ=255)
                                                              ccAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCACCCTTCGAACGGc                      >  1:4756910/1‑93 (MQ=255)
                                                                aGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGccc                    <  1:7950284/93‑1 (MQ=255)
                                                                aGCGCCGGGATACGAGACAGCAGGCTAAGCATTAAAAGAGCGGAGAGATCTTCTGCACACACGTTAAGAAAAGCACCGCACTTCGAACGAccc                    <  1:7811781/93‑1 (MQ=255)
                                                                  cgcCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCAt                  <  2:3777936/93‑1 (MQ=255)
                                                                   gcCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATc                 <  2:3116813/93‑1 (MQ=255)
                                                                   gcCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATc                 <  2:2066733/93‑1 (MQ=255)
                                                                   gcCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATc                 <  2:8124047/93‑1 (MQ=255)
                                                                    ccGGGTTAAGCGCCAGCAGGCTACGCATTAAATGAGCGGAGCGATCTTCTGCACGCACGTTACGAAAAGCACCGGCCTTAGAACGGCACATCg                >  2:224447/1‑93 (MQ=255)
                                                                     cGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCgg               <  1:1587756/93‑1 (MQ=255)
                                                                     cGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCgg               <  2:2604224/93‑1 (MQ=255)
                                                                      gggTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCggg              <  2:5587180/93‑1 (MQ=255)
                                                                       ggTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCgggg             <  2:6185987/93‑1 (MQ=255)
                                                                        gTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCggggg            >  1:5660854/1‑92 (MQ=255)
                                                                        gTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGt            <  2:5886429/93‑1 (MQ=255)
                                                                         ttACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTg           <  2:8636548/93‑1 (MQ=255)
                                                                          tACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGc          <  1:7354438/93‑1 (MQ=255)
                                                                             gcgcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCTCTTCGAACGGCCCATCCGGGTGCGac       >  1:922106/1‑92 (MQ=255)
                                                                             gcgcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGaa       <  1:4470018/93‑1 (MQ=255)
                                                                              cgcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAAt      <  1:1406753/93‑1 (MQ=255)
                                                                              cgcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAAt      <  1:4595816/93‑1 (MQ=255)
                                                                               gcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTGTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGCTGCGAAtt     >  1:1069163/1‑93 (MQ=255)
                                                                               gcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAAtt     <  1:5304280/93‑1 (MQ=255)
                                                                               gcCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAAtt     >  2:4566290/1‑93 (MQ=255)
                                                                                  agcaggCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCa  <  1:5041880/93‑1 (MQ=255)
                                                                                       ||                                                                                      
AAAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGCGTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCA  >  NC_000913/4026165‑4026339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 286 total aligned reads displayed.
GATATTAAAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGCGTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCATC  >  NC_000913/4026159‑4026341
                                                                                             |                                                                                         
GATATTAAAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGG                                                                                           >  SRR4302541.4774440/1‑94 (MQ=60)
GACATTAAAACCCTGCCCCAGCGTCTGCTGCACACAACCCCAGTAAATAGCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGG                                                                                           <  SRR4302541.1156761/94‑1 (MQ=60)
     TAAAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACG                                                                                      >  SRR4302541.4630226/1‑94 (MQ=60)
     TAAAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACG                                                                                      <  SRR4302541.5341371/94‑1 (MQ=60)
      AAAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGC                                                                                     >  SRR4302541.8034123/1‑94 (MQ=60)
       AAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCA                                                                                    >  SRR4302541.5685522/1‑94 (MQ=60)
       AAACCCTGCCCCAGCGTCGTCCGCACACAACCCCAGTAAATAACGTGGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCA                                                                                    <  SRR4302541.3016490/94‑1 (MQ=60)
        ACCCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCAT                                                                                   <  SRR4302541.5213994/94‑1 (MQ=60)
        AACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCAT                                                                                   <  SRR4302541.3976461/94‑1 (MQ=60)
        AACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCAT                                                                                   >  SRR4302541.8032624/1‑94 (MQ=60)
         ACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATT                                                                                  >  SRR4302541.3024875/1‑94 (MQ=60)
          CCCTGCTCCAGCGTCTGCTGCACACACCCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTA                                                                                 <  SRR4302541.1985780/94‑1 (MQ=60)
          CCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTA                                                                                 >  SRR4302541.8088128/1‑94 (MQ=60)
          CCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTA                                                                                 <  SRR4302541.8815015/94‑1 (MQ=60)
          CCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTA                                                                                 >  SRR4302541.7337632/1‑94 (MQ=60)
          CCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTA                                                                                 >  SRR4302541.5684023/1‑94 (MQ=60)
          CCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTA                                                                                 >  SRR4302541.3646014/1‑94 (MQ=60)
           CCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTTA                                                                                >  SRR4302541.5202949/1‑94 (MQ=60)
            CTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAA                                                                               >  SRR4302541.7375142/1‑94 (MQ=60)
            CTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAA                                                                               >  SRR4302541.7375143/1‑94 (MQ=60)
            CTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAA                                                                               >  SRR4302541.261688/1‑94 (MQ=60)
            CTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAA                                                                               <  SRR4302541.5567091/94‑1 (MQ=60)
              GCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATG                                                                             <  SRR4302541.3558447/94‑1 (MQ=60)
              GCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATG                                                                             <  SRR4302541.6810121/94‑1 (MQ=60)
              GCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGATACGCGCCAGCAGGCTACGCATTAAATG                                                                             >  SRR4302541.2207137/1‑94 (MQ=60)
               CTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGA                                                                            <  SRR4302541.6183488/94‑1 (MQ=60)
               CTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGA                                                                            >  SRR4302541.4603396/1‑94 (MQ=60)
               CTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGA                                                                            >  SRR4302541.6459366/1‑94 (MQ=60)
               CTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGA                                                                            <  SRR4302541.7427633/94‑1 (MQ=60)
                TCCGGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAG                                                                           <  SRR4302541.3670288/94‑1 (MQ=60)
                CCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAG                                                                           <  SRR4302541.634677/94‑1 (MQ=60)
                 CCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGC                                                                          >  SRR4302541.706450/1‑94 (MQ=60)
                 CCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGC                                                                          <  SRR4302541.2095430/94‑1 (MQ=60)
                 CCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGC                                                                          <  SRR4302541.2236467/94‑1 (MQ=60)
                 CCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTCACGCGCCAGCAGGCTACGCATTAAATGAGG                                                                          >  SRR4302541.8214717/1‑94 (MQ=60)
                  CAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCG                                                                         >  SRR4302541.8021661/1‑94 (MQ=60)
                  CAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCG                                                                         >  SRR4302541.8204913/1‑94 (MQ=60)
                  CAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCG                                                                         <  SRR4302541.6951590/94‑1 (MQ=60)
                  CAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCG                                                                         >  SRR4302541.1554318/1‑94 (MQ=60)
                  CAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCG                                                                         <  SRR4302541.6951589/94‑1 (MQ=60)
                   AGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGGGCCGGGTTACGCGCCACCAGGCTACGCATTAAATGAGCGG                                                                        >  SRR4302541.6566549/1‑94 (MQ=60)
                   AGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGG                                                                        <  SRR4302541.637681/94‑1 (MQ=60)
                   AGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGG                                                                        >  SRR4302541.7009358/1‑94 (MQ=60)
                   AGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGG                                                                        >  SRR4302541.1646525/1‑94 (MQ=60)
                   AGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGG                                                                        <  SRR4302541.7940249/94‑1 (MQ=60)
                    gcgcgTGCTGCACTCACCCCCAGTAAACATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGA                                                                       <  SRR4302541.6817367/89‑1 (MQ=60)
                     CGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAG                                                                      <  SRR4302541.8587936/94‑1 (MQ=60)
                     CGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAG                                                                      <  SRR4302541.2118763/94‑1 (MQ=60)
                      GTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGG                                                                     >  SRR4302541.6266419/1‑94 (MQ=60)
                      GTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGG                                                                     >  SRR4302541.1772935/1‑94 (MQ=60)
                      GTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGA                                                                     >  SRR4302541.7793521/1‑94 (MQ=60)
                      GTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGA                                                                     >  SRR4302541.3627950/1‑94 (MQ=60)
                      GTCTGCTGCACACAACCCCAGTAAATATCGTAGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGA                                                                     <  SRR4302541.1627906/94‑1 (MQ=60)
                       TCTGCTGCACACAGCCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAG                                                                    <  SRR4302541.7933831/94‑1 (MQ=60)
                       TCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAG                                                                    <  SRR4302541.1974752/94‑1 (MQ=60)
                       TCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAG                                                                    <  SRR4302541.6617860/94‑1 (MQ=60)
                        CTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAACTGAGCGGAGAGA                                                                   >  SRR4302541.2411879/1‑94 (MQ=60)
                        CTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGT                                                                   >  SRR4302541.2351250/1‑94 (MQ=60)
                        CTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGA                                                                   >  SRR4302541.404235/1‑94 (MQ=60)
                        CTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGA                                                                   <  SRR4302541.3975767/94‑1 (MQ=60)
                        CTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGA                                                                   >  SRR4302541.8783144/1‑94 (MQ=60)
                         TGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAT                                                                  >  SRR4302541.1235505/1‑94 (MQ=60)
                         TGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGACGCTTCCAGCGCCGGGATACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGAT                                                                  >  SRR4302541.1027432/1‑94 (MQ=60)
                          GCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATC                                                                 <  SRR4302541.7756624/94‑1 (MQ=60)
                           CTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCT                                                                <  SRR4302541.2526252/94‑1 (MQ=60)
                           CTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCT                                                                >  SRR4302541.8120162/1‑94 (MQ=60)
                            TGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTT                                                               >  SRR4302541.121735/1‑94 (MQ=60)
                            TGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTT                                                               >  SRR4302541.2718961/1‑94 (MQ=60)
                             GCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTC                                                              >  SRR4302541.6035659/1‑94 (MQ=60)
                               ACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTG                                                            >  SRR4302541.4807786/1‑94 (MQ=60)
                               ACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTG                                                            >  SRR4302541.8796548/1‑94 (MQ=60)
                                CACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGC                                                           >  SRR4302541.5192932/1‑94 (MQ=60)
                                  CACCCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCAC                                                         <  SRR4302541.3421877/94‑1 (MQ=60)
                                  CAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCAG                                                         >  SRR4302541.4252888/1‑94 (MQ=60)
                                  CAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCAC                                                         <  SRR4302541.6982228/94‑1 (MQ=60)
                                   ACCCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACG                                                        <  SRR4302541.3121691/94‑1 (MQ=60)
                                   AACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACG                                                        >  SRR4302541.1000231/1‑94 (MQ=60)
                                   AACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACG                                                        <  SRR4302541.3961009/94‑1 (MQ=60)
                                   AACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACG                                                        >  SRR4302541.3362710/1‑94 (MQ=60)
                                    ACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGC                                                       >  SRR4302541.3061484/1‑94 (MQ=60)
                                     CCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCA                                                      >  SRR4302541.7719104/1‑94 (MQ=60)
                                      CCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCAC                                                     >  SRR4302541.8627624/1‑94 (MQ=60)
                                      CCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCAC                                                     >  SRR4302541.2473717/1‑94 (MQ=60)
                                      CCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCAC                                                     >  SRR4302541.7938094/1‑94 (MQ=60)
                                       CCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGTGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACG                                                    >  SRR4302541.5392244/1‑94 (MQ=60)
                                       CCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACG                                                    >  SRR4302541.5575613/1‑94 (MQ=60)
                                       CCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACG                                                    <  SRR4302541.1890712/94‑1 (MQ=60)
                                       CCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACG                                                    >  SRR4302541.6303933/1‑94 (MQ=60)
                                        CAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGT                                                   >  SRR4302541.2044145/1‑94 (MQ=60)
                                        CAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGT                                                   >  SRR4302541.8342304/1‑94 (MQ=60)
                                        CAATAAATATCGTGGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGGGCGGAGAGATCTTCTGCACGCACGT                                                   <  SRR4302541.2419618/94‑1 (MQ=60)
                                         AGTAAATATGGGAGAGGTCCGCCGCTTACAGCGCCGGGTTCCGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTT                                                  <  SRR4302541.1935344/94‑1 (MQ=60)
                                         AGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGATAAGCGCCAGCCGGCTACGCATTAAATCAGCGGAGAGATCATGTGCACGCACGTT                                                  >  SRR4302541.3684540/1‑94 (MQ=60)
                                            AAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTCCGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACG                                               <  SRR4302541.7335673/94‑1 (MQ=60)
                                            AAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACG                                               <  SRR4302541.6330795/94‑1 (MQ=60)
                                            AAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACG                                               <  SRR4302541.3377454/94‑1 (MQ=60)
                                            AAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACG                                               >  SRR4302541.6784013/1‑94 (MQ=60)
                                            AAATATCGTCCAGGGCCGCCGCTTCCAGCGCCGGGGTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACG                                               <  SRR4302541.7335674/94‑1 (MQ=60)
                                             AATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGA                                              >  SRR4302541.4691730/1‑94 (MQ=60)
                                              ATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAA                                             >  SRR4302541.4963959/1‑94 (MQ=60)
                                              ATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAA                                             >  SRR4302541.2858795/1‑94 (MQ=60)
                                                ATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAA                                           <  SRR4302541.4463032/94‑1 (MQ=60)
                                                 TCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCTCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAG                                          <  SRR4302541.3551073/94‑1 (MQ=60)
                                                 TCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAG                                          >  SRR4302541.1451080/1‑94 (MQ=60)
                                                 TCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAG                                          <  SRR4302541.7098002/94‑1 (MQ=60)
                                                  CGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGC                                         >  SRR4302541.8231130/1‑94 (MQ=60)
                                                   GTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCA                                        <  SRR4302541.5728916/94‑1 (MQ=60)
                                                   GTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCA                                        <  SRR4302541.2655915/94‑1 (MQ=60)
                                                    TCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCAC                                       <  SRR4302541.8407438/94‑1 (MQ=60)
                                                     CGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACC                                      <  SRR4302541.7052863/94‑1 (MQ=60)
                                                     CGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACC                                      <  SRR4302541.4069878/94‑1 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     >  SRR4302541.1527208/1‑94 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     >  SRR4302541.5025170/1‑94 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     <  SRR4302541.5281508/94‑1 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     <  SRR4302541.8856829/94‑1 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     >  SRR4302541.3769025/1‑94 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     >  SRR4302541.7526978/1‑94 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     >  SRR4302541.1055426/1‑94 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     >  SRR4302541.3780508/1‑94 (MQ=60)
                                                      GAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCG                                     >  SRR4302541.4299858/1‑94 (MQ=60)
                                                       AGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGC                                    <  SRR4302541.6684461/94‑1 (MQ=60)
                                                       AGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGC                                    >  SRR4302541.2805370/1‑94 (MQ=60)
                                                         GGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCC                                  >  SRR4302541.8305820/1‑94 (MQ=60)
                                                         GGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCC                                  <  SRR4302541.947774/94‑1 (MQ=60)
                                                          GCCGCCGCTTCCAGCGCCGGGTTACGCGGCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCT                                 <  SRR4302541.5296176/94‑1 (MQ=60)
                                                          GCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCT                                 <  SRR4302541.5721848/94‑1 (MQ=60)
                                                          GCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCT                                 >  SRR4302541.8605088/1‑94 (MQ=60)
                                                          GCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCT                                 <  SRR4302541.7200264/94‑1 (MQ=60)
                                                          GCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCT                                 <  SRR4302541.7574041/94‑1 (MQ=60)
                                                           CCGCCTCTTCCAGCGCCGGATTACGCGCCAGCAGGCTACGCATTAAAGGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTT                                <  SRR4302541.5071724/94‑1 (MQ=60)
                                                           CCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTT                                <  SRR4302541.5426492/94‑1 (MQ=60)
                                                           CCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTT                                <  SRR4302541.6859276/94‑1 (MQ=60)
                                                           CCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTT                                <  SRR4302541.5071723/94‑1 (MQ=60)
                                                           CCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTT                                <  SRR4302541.2953746/94‑1 (MQ=60)
                                                            CGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTC                               <  SRR4302541.2301595/94‑1 (MQ=60)
                                                            CGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTC                               >  SRR4302541.7690727/1‑94 (MQ=60)
                                                             GCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCG                              >  SRR4302541.3463101/1‑94 (MQ=60)
                                                             GCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCG                              >  SRR4302541.4982006/1‑94 (MQ=60)
                                                             GCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCG                              >  SRR4302541.2554746/1‑94 (MQ=60)
                                                             GCCGATTCCAGCGCCGGGTTACGCGCCAGCAGGCTCCGCATTAAATGAGCGGAGAGTTATTCTGCACGTACGTTAGGAAAAGCACCGCCCTTCG                              >  SRR4302541.8015751/1‑94 (MQ=60)
                                                              CCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGA                             >  SRR4302541.1014399/1‑94 (MQ=60)
                                                              CCGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGA                             >  SRR4302541.3992273/1‑94 (MQ=60)
                                                               CGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAA                            >  SRR4302541.2874835/1‑94 (MQ=60)
                                                               CGCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAA                            >  SRR4302541.3946779/1‑94 (MQ=60)
                                                                GCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAAC                           <  SRR4302541.846442/94‑1 (MQ=60)
                                                                GCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAAC                           >  SRR4302541.450478/1‑94 (MQ=60)
                                                                GCTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAAC                           >  SRR4302541.497538/1‑94 (MQ=60)
                                                                 CTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACG                          <  SRR4302541.1040373/94‑1 (MQ=60)
                                                                 CTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACG                          >  SRR4302541.275488/1‑94 (MQ=60)
                                                                 CTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACG                          <  SRR4302541.3186153/94‑1 (MQ=60)
                                                                 CTTCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACG                          <  SRR4302541.5813374/94‑1 (MQ=60)
                                                                   TCCAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCACCCTTCGAACGGC                        >  SRR4302541.4805500/1‑94 (MQ=60)
                                                                     CAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCC                      <  SRR4302541.49101/94‑1 (MQ=60)
                                                                     CAGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCC                      <  SRR4302541.5475236/94‑1 (MQ=60)
                                                                      CGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCA                     <  SRR4302541.2836020/94‑1 (MQ=60)
                                                                      AGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCA                     <  SRR4302541.8642947/94‑1 (MQ=60)
                                                                      AGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCA                     <  SRR4302541.8037877/94‑1 (MQ=60)
                                                                      AGCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCA                     >  SRR4302541.2050273/1‑94 (MQ=60)
                                                                      AGCGCCGGGATACGAGACAGCAGGCTAAGCATTAAAAGAGCGGAGAGATCTTCTGCACACACGTTAAGAAAAGCACCGCACTTCGAACGACCCA                     <  SRR4302541.7896225/94‑1 (MQ=36)
                                                                       GCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCAT                    >  SRR4302541.516488/1‑94 (MQ=60)
                                                                       GCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCAT                    <  SRR4302541.5348810/94‑1 (MQ=60)
                                                                       GCGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCAT                    <  SRR4302541.405646/94‑1 (MQ=60)
                                                                        CGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATC                   <  SRR4302541.1105679/94‑1 (MQ=60)
                                                                        CGCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATC                   <  SRR4302541.2824493/94‑1 (MQ=60)
                                                                         GCCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCG                  >  SRR4302541.3106054/1‑94 (MQ=60)
                                                                          CCGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGG                 <  SRR4302541.5991202/94‑1 (MQ=60)
                                                                           CGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGG                >  SRR4302541.3947855/1‑94 (MQ=60)
                                                                           CGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGG                <  SRR4302541.1603575/94‑1 (MQ=60)
                                                                           CGGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGG                >  SRR4302541.3309456/1‑94 (MQ=60)
                                                                            GGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGG               <  SRR4302541.4085929/94‑1 (MQ=60)
                                                                            GGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGG               >  SRR4302541.1241861/1‑94 (MQ=60)
                                                                            GGGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGG               <  SRR4302541.2150545/94‑1 (MQ=60)
                                                                             GGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGT              <  SRR4302541.4992403/94‑1 (MQ=60)
                                                                             GGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGT              <  SRR4302541.7192607/94‑1 (MQ=60)
                                                                             GGTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGG              <  SRR4302541.4992404/94‑1 (MQ=60)
                                                                              GTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTG             <  SRR4302541.130381/94‑1 (MQ=60)
                                                                              GTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTG             <  SRR4302541.68447/94‑1 (MQ=60)
                                                                              GTTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTG             <  SRR4302541.4537726/94‑1 (MQ=60)
                                                                               TTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGC            >  SRR4302541.5793317/1‑94 (MQ=60)
                                                                               TTACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGC            >  SRR4302541.5748490/1‑94 (MQ=60)
                                                                                TACGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCG           <  SRR4302541.7433006/94‑1 (MQ=60)
                                                                                  CGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCTCTTCGAACGGCCCATCCGGGTGCGAC         >  SRR4302541.930754/1‑94 (MQ=60)
                                                                                  CGCGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAA         <  SRR4302541.8070589/94‑1 (MQ=60)
                                                                                  CGAGCCAGCAGGCTACGCATTAAATGAGCGCAGAGATCTTCTGCACGCCCGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAA         <  SRR4302541.444247/94‑1 (MQ=60)
                                                                                    CGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATT       >  SRR4302541.1079113/1‑94 (MQ=60)
                                                                                    CGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATT       <  SRR4302541.3619759/94‑1 (MQ=60)
                                                                                    CGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATT       <  SRR4302541.3045014/94‑1 (MQ=60)
                                                                                    CGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATT       <  SRR4302541.4642439/94‑1 (MQ=60)
                                                                                    CGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATT       <  SRR4302541.8153852/94‑1 (MQ=60)
                                                                                    CGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATT       <  SRR4302541.1420481/94‑1 (MQ=60)
                                                                                    CGCCAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATT       <  SRR4302541.8681620/94‑1 (MQ=60)
                                                                                     GCCAGCAGGCTACGCATTAAATGAGAGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTG      >  SRR4302541.615156/1‑94 (MQ=60)
                                                                                       CAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCA    >  SRR4302541.436103/1‑94 (MQ=60)
                                                                                       CAGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCA    >  SRR4302541.7857751/1‑94 (MQ=60)
                                                                                        AGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCAT   >  SRR4302541.334875/1‑94 (MQ=60)
                                                                                        AGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCAT   >  SRR4302541.6915708/1‑94 (MQ=60)
                                                                                        AGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCAT   <  SRR4302541.7974975/94‑1 (MQ=60)
                                                                                        AGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCAT   <  SRR4302541.467344/94‑1 (MQ=60)
                                                                                        AGCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCAT   <  SRR4302541.5093761/94‑1 (MQ=60)
                                                                                         GCAGGCTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCATC  >  SRR4302541.438776/1‑94 (MQ=60)
                                                                                             |                                                                                         
GATATTAAAACCCTGCTCCAGCGTCTGCTGCACACAACCCCAGTAAATATCGTCGAGGGCCGCCGCTTCCAGCGCCGGGTTACGCGCCAGCAGCGTACGCATTAAATGAGCGGAGAGATCTTCTGCACGCACGTTACGAAAAGCACCGCCCTTCGAACGGCCCATCGGGGTGCGAATTGCATC  >  NC_000913/4026159‑4026341

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑