Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,088,793 T→C T385T (ACA→ACG)  frvB ← PTS system, fructose‑like enzyme IIBC component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,088,7930TC99.3% 909.5 / ‑3.7 270T385T (ACA→ACG) frvBPTS system, fructose‑like enzyme IIBC component
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (114/154);  total (115/155)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01

Only 100 of 288 total aligned reads displayed.

CACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACTGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGC  >  NC_000913/4088703‑4088882
                                                                                          |                                                                                         
cACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACcgt                                                                                         <  2:4039858/93‑1 (MQ=255)
 ccGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACcgtg                                                                                        <  2:211840/92‑1 (MQ=255)
 aCGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACcgtg                                                                                        <  2:3063193/93‑1 (MQ=255)
       gTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCg                                                                                  >  2:4120265/1‑93 (MQ=255)
         aaTGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGAc                                                                                <  2:5463031/93‑1 (MQ=255)
         aaTGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGAc                                                                                >  1:5926662/1‑93 (MQ=255)
          aTGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCCTGGCACCGAcc                                                                               >  1:2589345/1‑93 (MQ=255)
             ccgcccgcCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACcaca                                                                            >  2:8253289/1‑93 (MQ=255)
              cgcccgccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACaa                                                                           >  2:5573953/1‑93 (MQ=255)
              cgcccgccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACaa                                                                           >  2:3564798/1‑93 (MQ=255)
              cgcccgccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACaa                                                                           <  1:4197978/93‑1 (MQ=255)
              cgcccgccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACaa                                                                           <  1:666063/93‑1 (MQ=255)
               gcccgccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAAt                                                                          <  1:3800120/93‑1 (MQ=255)
                cccgccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATg                                                                         <  1:654552/93‑1 (MQ=255)
                 ccgccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATgg                                                                        <  2:5882207/93‑1 (MQ=255)
                   gccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCAACCACAATGGCa                                                                      <  2:4421921/93‑1 (MQ=255)
                    ccAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCac                                                                     <  2:1792987/93‑1 (MQ=255)
                        cGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCactact                                                                 >  1:1355585/1‑93 (MQ=255)
                         gtgttGGCGGTGATCATCGGCAGCGGAGCTGCCAGAGCGTACGGAATAGCCGGTTCGGTTGCGGCCGTGGCACCGACCACAATGGCACTACTg                                                                <  1:6684830/90‑1 (MQ=255)
                         gTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTg                                                                <  1:4558353/93‑1 (MQ=255)
                         gTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTg                                                                <  1:5091967/93‑1 (MQ=255)
                          tATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTgg                                                               <  2:7138528/93‑1 (MQ=255)
                          tATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTgg                                                               >  2:6952745/1‑93 (MQ=255)
                           aTTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTgtc                                                              >  1:6837943/1‑91 (MQ=255)
                           aTTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGc                                                              >  1:237130/1‑93 (MQ=255)
                            ttGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCa                                                             >  1:6757412/1‑93 (MQ=255)
                            ttGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCa                                                             <  1:1097599/93‑1 (MQ=255)
                            ttGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCa                                                             <  2:419865/93‑1 (MQ=255)
                            ttGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCa                                                             <  1:2218675/93‑1 (MQ=255)
                              ggCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGc                                                           <  2:3138020/93‑1 (MQ=255)
                               gCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGcc                                                          >  2:1276705/1‑93 (MQ=255)
                                cGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCct                                                         <  1:7513732/93‑1 (MQ=255)
                                 ggTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCctc                                                        >  2:6567678/1‑93 (MQ=255)
                                 ggTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCctc                                                        <  2:3452234/93‑1 (MQ=255)
                                  gTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCctct                                                       <  1:6471437/93‑1 (MQ=255)
                                  gTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCctct                                                       >  1:1941208/1‑93 (MQ=255)
                                  gTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCctct                                                       <  2:1848331/93‑1 (MQ=255)
                                    aaTCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCttt                                                     <  1:8290289/93‑1 (MQ=255)
                                     atcatcGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCtttt                                                    <  1:8202706/93‑1 (MQ=255)
                                     atcatcGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCtttt                                                    <  1:101793/93‑1 (MQ=255)
                                     atcatcGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCtttt                                                    <  1:1608446/93‑1 (MQ=255)
                                      tcatcaGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCttttt                                                   >  1:7366043/1‑93 (MQ=255)
                                          cGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTg                                               <  2:4315186/93‑1 (MQ=255)
                                          cGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTg                                               <  2:5423798/93‑1 (MQ=255)
                                           ggCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGt                                              <  1:4120019/93‑1 (MQ=255)
                                            gCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTc                                             <  2:6118964/93‑1 (MQ=255)
                                            gCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTc                                             <  2:2016244/93‑1 (MQ=255)
                                            gCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTc                                             <  1:8047814/93‑1 (MQ=255)
                                             cAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCg                                            <  2:1476529/93‑1 (MQ=255)
                                               aCGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCggg                                          >  2:6844076/1‑93 (MQ=255)
                                               aCGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCggg                                          <  1:5676680/93‑1 (MQ=255)
                                               aCGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCggg                                          >  1:3685904/1‑93 (MQ=255)
                                               aCGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCggg                                          >  1:2468296/1‑93 (MQ=255)
                                                cGGAGCTGCGAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGt                                         <  2:3276519/93‑1 (MQ=255)
                                                 ggAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTa                                        <  1:8731687/93‑1 (MQ=255)
                                                   aGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGaaaa                                      >  1:939383/1‑93 (MQ=255)
                                                    gCTGCGAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAAc                                     <  1:1684708/93‑1 (MQ=255)
                                                    gCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAAc                                     >  2:7472844/1‑93 (MQ=255)
                                                      tGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAg                                   <  1:7018371/93‑1 (MQ=255)
                                                      tGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAg                                   <  1:4912704/93‑1 (MQ=255)
                                                       gCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGt                                  >  1:473320/1‑93 (MQ=255)
                                                        ccAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCGCCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGCCGGGTAAACAGtt                                 <  2:1116779/93‑1 (MQ=255)
                                                         cAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGttt                                >  2:2526592/1‑93 (MQ=255)
                                                         cAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGttt                                >  1:7983619/1‑93 (MQ=255)
                                                         cAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGttt                                <  1:374603/93‑1 (MQ=255)
                                                          agagCGTAATGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTg                               <  1:7410592/93‑1 (MQ=255)
                                                          agagCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTTGGGTAAACAGTTTg                               <  1:2895583/93‑1 (MQ=255)
                                                          agagCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTg                               >  1:7579126/1‑93 (MQ=255)
                                                          agagCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTg                               <  1:2032320/93‑1 (MQ=255)
                                                           gagCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTgg                              >  2:6295731/1‑93 (MQ=255)
                                                            agCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTggg                             <  2:2340577/93‑1 (MQ=255)
                                                            agCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCGTTTTCCTGTCGGGTAAACATGTTggg                             >  1:5462888/1‑93 (MQ=255)
                                                             gCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGgc                            <  2:2277537/93‑1 (MQ=255)
                                                                  aGGAATAGCCGGTTCGGTTGCGACTGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAAt                       >  1:1513512/1‑93 (MQ=255)
                                                                  aGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAAt                       <  1:5138120/93‑1 (MQ=255)
                                                                  aGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAAt                       <  1:2703740/93‑1 (MQ=255)
                                                                  aGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGGCGGGTAAACAGTTTGGGCGCAAt                       >  2:4740705/1‑93 (MQ=255)
                                                                    gAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGa                     >  1:910550/1‑93 (MQ=255)
                                                                     aaTAGCCGGTTGGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGaa                    <  2:5012332/93‑1 (MQ=255)
                                                                      aTAGCTGGTTCGGTTGCGCCCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAAc                   <  1:8489917/93‑1 (MQ=255)
                                                                      aTAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAAc                   <  2:8412908/93‑1 (MQ=255)
                                                                      aTAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAAc                   >  2:8001368/1‑93 (MQ=255)
                                                                        aGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACgc                 >  2:6862239/1‑92 (MQ=255)
                                                                         gCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTc                >  2:2594148/1‑93 (MQ=255)
                                                                         gCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTc                <  1:6080863/93‑1 (MQ=255)
                                                                           cggttcggttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGc              >  1:3974932/1‑93 (MQ=255)
                                                                           cggttcggttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGc              >  2:762197/1‑93 (MQ=255)
                                                                             gtttggttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCaa            >  2:6882216/1‑93 (MQ=255)
                                                                             gttcggttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCaa            >  1:5811576/1‑93 (MQ=255)
                                                                             gttcggttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCaa            <  2:4806006/93‑1 (MQ=255)
                                                                                 ggttGCTACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGAcc        <  2:925010/93‑1 (MQ=255)
                                                                                 ggttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGAcc        <  2:3902908/93‑1 (MQ=255)
                                                                                  gttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGAccc       <  2:1619592/93‑1 (MQ=255)
                                                                                  gttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGAccc       >  2:2840607/1‑93 (MQ=255)
                                                                                  gttGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGAccc       >  2:2459684/1‑93 (MQ=255)
                                                                                    tGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGCCccgc     <  2:7744258/93‑1 (MQ=255)
                                                                                     gCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACccgcc    <  2:6766391/93‑1 (MQ=255)
                                                                                       gACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCcgccgc  >  1:3472328/1‑93 (MQ=255)
                                                                                       gACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCcgccgc  <  1:4501433/93‑1 (MQ=255)
                                                                                       gACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCcgccgc  <  1:2906925/93‑1 (MQ=255)
                                                                                          |                                                                                         
CACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACTGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGC  >  NC_000913/4088703‑4088882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAGCACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACTGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGCGA  >  NC_000913/4088700‑4088884
                                                                                             |                                                                                           
CAGCCCGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACC                                                                                             <  SRR4302541.6297406/94‑1 (MQ=60)
CAGCACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACC                                                                                             <  SRR4302541.1052996/94‑1 (MQ=60)
CAGCACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACC                                                                                             <  SRR4302541.272578/94‑1 (MQ=60)
CAGCACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACC                                                                                             >  SRR4302541.4246539/1‑94 (MQ=60)
CAGCACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACC                                                                                             >  SRR4302541.6410206/1‑94 (MQ=60)
CAGCACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACC                                                                                             >  SRR4302541.8243496/1‑94 (MQ=60)
  GCACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGT                                                                                           <  SRR4302541.3194598/94‑1 (MQ=60)
  GCACCCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGT                                                                                           <  SRR4302541.7695370/94‑1 (MQ=60)
       CCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCAC                                                                                      >  SRR4302541.7677701/1‑94 (MQ=60)
       CCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAACGAATAGCCGGTTCGGTTGCGACCGTGGCAC                                                                                      >  SRR4302541.2827954/1‑94 (MQ=60)
        CGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACC                                                                                     >  SRR4302541.8431760/1‑94 (MQ=60)
        CGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACC                                                                                     >  SRR4302541.686718/1‑94 (MQ=60)
         GGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAGGGAATAGCCGGTCCGGTTGCGACAGTGGCACCG                                                                                    >  SRR4302541.7617321/1‑94 (MQ=60)
         GGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCG                                                                                    >  SRR4302541.7617320/1‑94 (MQ=60)
         GGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCG                                                                                    >  SRR4302541.7480209/1‑94 (MQ=60)
         GGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCG                                                                                    >  SRR4302541.6669395/1‑94 (MQ=60)
           TAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGAC                                                                                  >  SRR4302541.5987018/1‑94 (MQ=60)
            AATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCCTGGCACCGACC                                                                                 >  SRR4302541.2615287/1‑94 (MQ=60)
              TGCCGCCCGCCAGCGTATTGGAGGTAATCATCGGCAACAAAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCAC                                                                               >  SRR4302541.6364084/1‑94 (MQ=60)
                 CGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAAT                                                                            <  SRR4302541.672342/94‑1 (MQ=60)
                 CGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAAT                                                                            <  SRR4302541.4239684/94‑1 (MQ=60)
                  GCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATG                                                                           <  SRR4302541.3838364/94‑1 (MQ=60)
                   CCCTCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGG                                                                          <  SRR4302541.2931166/94‑1 (MQ=60)
                   CCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGG                                                                          <  SRR4302541.660729/94‑1 (MQ=60)
                   CCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGG                                                                          <  SRR4302541.4227211/94‑1 (MQ=60)
                   CCCCCCAGCGTGTTGGCGATAACCCTCGGCAACGGAGCTGCCAGAGCGGAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGG                                                                          <  SRR4302541.2931165/94‑1 (MQ=60)
                    CCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGC                                                                         <  SRR4302541.1322213/94‑1 (MQ=60)
                      GCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCAC                                                                       >  SRR4302541.8258964/1‑94 (MQ=60)
                       CCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACT                                                                      <  SRR4302541.5579670/94‑1 (MQ=60)
                        CAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTA                                                                     >  SRR4302541.5146417/1‑94 (MQ=60)
                         AGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTAC                                                                    >  SRR4302541.3681402/1‑94 (MQ=60)
                          GCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACT                                                                   <  SRR4302541.6206410/94‑1 (MQ=60)
                          GCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACT                                                                   <  SRR4302541.1268294/94‑1 (MQ=60)
                          GCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACT                                                                   >  SRR4302541.1368978/1‑94 (MQ=60)
                           CGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTG                                                                  >  SRR4302541.8324361/1‑94 (MQ=60)
                           CGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTG                                                                  <  SRR4302541.3791833/94‑1 (MQ=60)
                            GTGTTGGCGGTGATCATCGGCAGCGGAGCTGCCAGAGCGTACGGAATAGCCGGTTCGGTTGCGGCCGTGGCACCGACCACAATGGCACTACTGG                                                                 <  SRR4302541.6754077/94‑1 (MQ=60)
                            GTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCGCCGACCACAATGGCACTACTGG                                                                 <  SRR4302541.6867858/94‑1 (MQ=60)
                            GTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGG                                                                 <  SRR4302541.4604488/94‑1 (MQ=60)
                            GTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGG                                                                 <  SRR4302541.5144270/94‑1 (MQ=60)
                             TATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGTC                                                                >  SRR4302541.6911086/1‑94 (MQ=60)
                             TATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGC                                                                >  SRR4302541.239007/1‑94 (MQ=60)
                             TATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGC                                                                <  SRR4302541.1534297/94‑1 (MQ=60)
                              ATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCA                                                               <  SRR4302541.5814904/94‑1 (MQ=60)
                              ATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCA                                                               <  SRR4302541.1529798/94‑1 (MQ=60)
                              ATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCA                                                               >  SRR4302541.6829677/1‑94 (MQ=60)
                               TTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTTGCAG                                                              >  SRR4302541.5474064/1‑94 (MQ=60)
                               TTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAG                                                              <  SRR4302541.2240188/94‑1 (MQ=60)
                               TTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAG                                                              >  SRR4302541.4359095/1‑94 (MQ=60)
                               TTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAG                                                              >  SRR4302541.3730384/1‑94 (MQ=60)
                               TTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAG                                                              <  SRR4302541.1107861/94‑1 (MQ=60)
                                TGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGC                                                             <  SRR4302541.1419165/94‑1 (MQ=60)
                                 GGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCC                                                            >  SRR4302541.2552351/1‑94 (MQ=60)
                                  GCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCT                                                           <  SRR4302541.7092662/94‑1 (MQ=60)
                                   CGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTC                                                          <  SRR4302541.4004058/94‑1 (MQ=60)
                                   CGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTC                                                          <  SRR4302541.7594032/94‑1 (MQ=60)
                                    GGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCT                                                         >  SRR4302541.1959907/1‑94 (MQ=60)
                                     GTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTT                                                        >  SRR4302541.5915743/1‑94 (MQ=60)
                                     GTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTT                                                        <  SRR4302541.6537394/94‑1 (MQ=60)
                                     GTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTT                                                        <  SRR4302541.2443994/94‑1 (MQ=60)
                                     GTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGGTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTT                                                        >  SRR4302541.5915744/1‑94 (MQ=60)
                                      TAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTT                                                       <  SRR4302541.2626594/94‑1 (MQ=60)
                                       AATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTT                                                      <  SRR4302541.8380448/94‑1 (MQ=60)
                                       AATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTT                                                      >  SRR4302541.6824380/1‑94 (MQ=60)
                                        ATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCCCCGACCACAATGGCACTACTGGCAGCCTCTTTTT                                                     <  SRR4302541.8292214/94‑1 (MQ=60)
                                        ATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGCCCACAATGGCACTACTGGCAGCCTCTTTTT                                                     >  SRR4302541.1434431/1‑94 (MQ=60)
                                        ATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTT                                                     >  SRR4302541.8808920/1‑94 (MQ=60)
                                        ATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTT                                                     >  SRR4302541.7444769/1‑94 (MQ=60)
                                        ATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTT                                                     <  SRR4302541.8292213/94‑1 (MQ=60)
                                        ATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTT                                                     <  SRR4302541.102655/94‑1 (MQ=60)
                                        ATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTT                                                     <  SRR4302541.1624435/94‑1 (MQ=60)
                                        ATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTT                                                     <  SRR4302541.8126456/94‑1 (MQ=60)
                                        ATCATCAGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTT                                                     >  SRR4302541.7444770/1‑94 (MQ=60)
                                           ATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCT                                                  <  SRR4302541.20636/94‑1 (MQ=60)
                                           ATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCT                                                  <  SRR4302541.4753844/94‑1 (MQ=60)
                                           ATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCT                                                  <  SRR4302541.2003953/94‑1 (MQ=60)
                                            TCGGCAGCGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTG                                                 <  SRR4302541.6008839/94‑1 (MQ=60)
                                            TCGGCAACGGAGCTGCCAGAGCGTAAGGAATGGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTG                                                 >  SRR4302541.6746375/1‑94 (MQ=60)
                                            TCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTG                                                 >  SRR4302541.6746374/1‑94 (MQ=60)
                                            TCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTG                                                 <  SRR4302541.5762190/94‑1 (MQ=60)
                                             CGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGT                                                <  SRR4302541.921582/94‑1 (MQ=60)
                                              GGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTC                                               <  SRR4302541.4160709/94‑1 (MQ=60)
                                              GGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCCTTTTCCTGTC                                               >  SRR4302541.4091411/1‑94 (MQ=60)
                                               GCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCG                                              <  SRR4302541.8136304/94‑1 (MQ=60)
                                               GCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCG                                              <  SRR4302541.7540105/94‑1 (MQ=60)
                                               GCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCG                                              <  SRR4302541.4169307/94‑1 (MQ=60)
                                                CAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGG                                             >  SRR4302541.7400700/1‑94 (MQ=60)
                                                CAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGG                                             >  SRR4302541.2446673/1‑94 (MQ=60)
                                                 AACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGG                                            <  SRR4302541.8842465/94‑1 (MQ=60)
                                                 AACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGG                                            >  SRR4302541.3723215/1‑94 (MQ=60)
                                                 AACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGG                                            >  SRR4302541.38192/1‑94 (MQ=60)
                                                 AACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGG                                            >  SRR4302541.2492971/1‑94 (MQ=60)
                                                  ACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGT                                           <  SRR4302541.5734603/94‑1 (MQ=60)
                                                  ACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGT                                           <  SRR4302541.5995372/94‑1 (MQ=60)
                                                  ACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGT                                           <  SRR4302541.4560404/94‑1 (MQ=60)
                                                    GGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAA                                         <  SRR4302541.8042289/94‑1 (MQ=60)
                                                    GGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAA                                         <  SRR4302541.8825172/94‑1 (MQ=60)
                                                     GAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAA                                        <  SRR4302541.5714927/94‑1 (MQ=60)
                                                     GAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGAAAA                                        >  SRR4302541.948333/1‑94 (MQ=60)
                                                      AGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAAC                                       >  SRR4302541.7478858/1‑94 (MQ=60)
                                                       GCTGCGAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACA                                      <  SRR4302541.1701264/94‑1 (MQ=60)
                                                       GCTGCCAGAGCGTAGGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGAGCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACA                                      <  SRR4302541.5093348/94‑1 (MQ=60)
                                                       GCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACA                                      <  SRR4302541.4254901/94‑1 (MQ=60)
                                                       GCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACA                                      <  SRR4302541.707244/94‑1 (MQ=60)
                                                        CTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAG                                     >  SRR4302541.1060821/1‑94 (MQ=60)
                                                         TGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGT                                    >  SRR4302541.477816/1‑94 (MQ=60)
                                                         TGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGT                                    <  SRR4302541.7093002/94‑1 (MQ=60)
                                                         TGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGT                                    <  SRR4302541.4962842/94‑1 (MQ=60)
                                                         CGCCAGAGCGTAAGGAATAGACGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCGTCTTTTTCCTGTCGGGTAAACAGT                                    <  SRR4302541.4641401/94‑1 (MQ=60)
                                                          GCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTT                                   >  SRR4302541.6642171/1‑94 (MQ=60)
                                                          GCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTT                                   >  SRR4302541.236203/1‑94 (MQ=60)
                                                           CCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTT                                  >  SRR4302541.8071548/1‑94 (MQ=60)
                                                            CAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTG                                 <  SRR4302541.986256/94‑1 (MQ=60)
                                                            CAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTG                                 <  SRR4302541.6522185/94‑1 (MQ=60)
                                                            CAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTG                                 >  SRR4302541.7660104/1‑94 (MQ=60)
                                                            CAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTG                                 <  SRR4302541.378047/94‑1 (MQ=60)
                                                            CAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGGAAACAGTTTG                                 >  SRR4302541.6584781/1‑94 (MQ=60)
                                                            CAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTATTTTTCCTGTCGGGGAAACAGTTTG                                 >  SRR4302541.3442885/1‑94 (MQ=60)
                                                             CGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGG                                <  SRR4302541.8101590/94‑1 (MQ=60)
                                                             AGAGCGTAATGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGG                                <  SRR4302541.7489851/94‑1 (MQ=60)
                                                             AGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTTGGGTAAACAGTTTGG                                <  SRR4302541.2924679/94‑1 (MQ=60)
                                                             AGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGG                                <  SRR4302541.2051944/94‑1 (MQ=60)
                                                             AGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGG                                >  SRR4302541.3680219/1‑94 (MQ=60)
                                                             AGAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGG                                >  SRR4302541.8847822/1‑94 (MQ=60)
                                                              GAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGG                               <  SRR4302541.2061454/94‑1 (MQ=60)
                                                              GAGCGTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCGTTTTCCTGTCGGGTAAACATGTTGGG                               >  SRR4302541.5518925/1‑94 (MQ=60)
                                                                  GTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCA                           <  SRR4302541.8218717/94‑1 (MQ=60)
                                                                  GTAAGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCA                           >  SRR4302541.5471219/1‑94 (MQ=60)
                                                                    AAGGAATAGCCGGTTCGGTTGCGACTGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAAT                         >  SRR4302541.1528584/1‑94 (MQ=60)
                                                                     AGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATG                        <  SRR4302541.4009668/94‑1 (MQ=60)
                                                                     AGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATG                        <  SRR4302541.2730623/94‑1 (MQ=60)
                                                                     AGGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATG                        <  SRR4302541.5190948/94‑1 (MQ=60)
                                                                      GGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGA                       <  SRR4302541.6795123/94‑1 (MQ=60)
                                                                      GGAATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGA                       >  SRR4302541.919030/1‑94 (MQ=60)
                                                                        GATAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAAC                     <  SRR4302541.1705865/94‑1 (MQ=60)
                                                                         ATAGCTGGTTCGGTTGCGCCCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACG                    <  SRR4302541.8581402/94‑1 (MQ=60)
                                                                          TAGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGT                   <  SRR4302541.1667552/94‑1 (MQ=60)
                                                                           AGCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTC                  >  SRR4302541.2887229/1‑94 (MQ=60)
                                                                            GCCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCG                 <  SRR4302541.6142935/94‑1 (MQ=60)
                                                                            GCCGGTGCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCG                 <  SRR4302541.4855374/94‑1 (MQ=60)
                                                                             CCGGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGC                >  SRR4302541.4014371/1‑94 (MQ=60)
                                                                               GGTTTGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAA              >  SRR4302541.2575996/1‑94 (MQ=60)
                                                                               GGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAA              >  SRR4302541.5870623/1‑94 (MQ=60)
                                                                               GGTTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAA              >  SRR4302541.4041195/1‑94 (MQ=60)
                                                                                 TTCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGA            <  SRR4302541.8555493/94‑1 (MQ=60)
                                                                                  TCGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGAC           <  SRR4302541.2014180/94‑1 (MQ=60)
                                                                                   CGGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACC          <  SRR4302541.5147929/94‑1 (MQ=60)
                                                                                    GGTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCC         <  SRR4302541.8734443/94‑1 (MQ=60)
                                                                                     GTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCG        <  SRR4302541.168649/94‑1 (MQ=60)
                                                                                     GTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCG        <  SRR4302541.4824187/94‑1 (MQ=60)
                                                                                     GTTGCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCG        >  SRR4302541.1923097/1‑94 (MQ=60)
                                                                                       TGCGACCGGGGCCCCCACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCC      <  SRR4302541.2620205/94‑1 (MQ=60)
                                                                                        GCGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCATGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCG     <  SRR4302541.3452414/94‑1 (MQ=60)
                                                                                         CGACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGC    >  SRR4302541.3507056/1‑94 (MQ=60)
                                                                                          GACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGCG   <  SRR4302541.4546839/94‑1 (MQ=60)
                                                                                          GACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGCG   <  SRR4302541.4546840/94‑1 (MQ=60)
                                                                                          GACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGCG   <  SRR4302541.2936149/94‑1 (MQ=60)
                                                                                           ACCGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGCGA  <  SRR4302541.4725226/94‑1 (MQ=60)
                                                                                             |                                                                                           
CAGCACGCCGGTAATGCCGCCCGCCAGCGTATTGGCGGTAATCATCGGCAACGGAGCTGCCAGAGCGTAAGGAATAGCCGGTTCGGTTGCGACTGTGGCACCGACCACAATGGCACTACTGGCAGCCTCTTTTTCCTGTCGGGTAAACAGTTTGGGCGCAATGAACGTCGCAAGACCCGCCGCGA  >  NC_000913/4088700‑4088884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑