Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,108,732	T→C	Q119R (CAG→CGG)	tpiA ←	triosephosphate isomerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,108,732	0	T	C	100.0%	1063.7 / NA	312	Q119R (CAG→CGG)	tpiA	triosephosphate isomerase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (139/173); total (139/173)

Only 100 of 335 total aligned reads displayed.

GCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCTGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTAC  >  NC_000913/4108642‑4108821

  ggcGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGctc                                                                                       <  1:7104862/91‑1 (MQ=255)

   tCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGctct                                                                                      >  2:1059252/1‑93 (MQ=255)

    cGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCtt                                                                                     >  1:8776662/1‑93 (MQ=255)

      aTCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTc                                                                                   >  1:8415689/1‑93 (MQ=255)

      aTCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTc                                                                                   >  1:2946255/1‑93 (MQ=255)

      aTCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTc                                                                                   <  1:5414352/93‑1 (MQ=255)

       tCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCa                                                                                  <  1:2284953/93‑1 (MQ=255)

       tCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCa                                                                                  <  2:4908812/93‑1 (MQ=255)

       tCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCa                                                                                  >  1:5952197/1‑93 (MQ=255)

        cTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAg                                                                                 >  1:6125020/1‑93 (MQ=255)

        cTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAg                                                                                 >  2:3882048/1‑93 (MQ=255)

          gACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCa                                                                               <  1:2099410/93‑1 (MQ=255)

           aCGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCAc                                                                              >  1:3590953/1‑93 (MQ=255)

             gTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACcg                                                                            >  2:6948740/1‑93 (MQ=255)

              tGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACcgc                                                                           >  1:7610323/1‑93 (MQ=255)

              tGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACcgc                                                                           <  2:592852/93‑1 (MQ=255)

               acgcAAACTTCTTCAGTTTTGCCCGCTTCATTTTTAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCAAcgcg                                                                          >  2:2824/2‑93 (MQ=255)

                 gcAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGaa                                                                        <  1:5631773/93‑1 (MQ=255)

                  cAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAt                                                                       <  2:3921583/93‑1 (MQ=255)

                  cAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAt                                                                       >  1:5252985/1‑93 (MQ=255)

                   aagcttcttCAGTTTTCCACGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAtt                                                                      <  2:6521851/90‑1 (MQ=255)

                   aaaCTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAtt                                                                      >  2:6140963/1‑93 (MQ=255)

                    aaCTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAttt                                                                     >  1:5177799/1‑93 (MQ=255)

                    aaCTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAttt                                                                     <  1:1200113/93‑1 (MQ=255)

                    aaCTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTCCAGCACCGCGAAttt                                                                     >  1:937377/1‑93 (MQ=255)

                      cttcttCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAttttt                                                                   <  1:8049934/93‑1 (MQ=255)

                       ttcttcAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAtttttt                                                                  >  1:6903752/1‑93 (MQ=255)

                       ttcttcAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAtttttt                                                                  >  1:655541/1‑93 (MQ=255)

                        tcttcAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTc                                                                 >  2:700470/1‑93 (MQ=255)

                        tcttcAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTc                                                                 <  2:8585196/93‑1 (MQ=255)

                         cttcAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTcg                                                                <  1:7909238/93‑1 (MQ=255)

                             aGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGAt                                                            <  2:3572699/93‑1 (MQ=255)

                              gTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATc                                                           <  2:4678792/93‑1 (MQ=255)

                              gTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATc                                                           <  2:5645795/93‑1 (MQ=255)

                              attttGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATc                                                           <  2:2210080/92‑1 (MQ=255)

                               ttttGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCa                                                          <  1:1035997/93‑1 (MQ=255)

                                tttGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAg                                                         >  1:8212744/1‑93 (MQ=255)

                                 ttGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGt                                                        <  2:8451144/93‑1 (MQ=255)

                                  tGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGtt                                                       <  2:367833/93‑1 (MQ=255)

                                  tGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGtt                                                       <  2:7901131/93‑1 (MQ=255)

                                   gCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTc                                                      >  1:2408294/1‑93 (MQ=255)

                                     ccGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGt                                                    <  1:3366735/93‑1 (MQ=255)

                                     ccGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGt                                                    >  2:460759/1‑93 (MQ=255)

                                       gCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCa                                                  >  1:6056243/1‑93 (MQ=255)

                                       gCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCa                                                  <  2:7508735/93‑1 (MQ=255)

                                          tCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGAt                                               <  2:1743119/93‑1 (MQ=255)

                                          tCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGACCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGAt                                               >  1:1496158/1‑93 (MQ=255)

                                            aTTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGTTCAGTTCGTCAGATTc                                             >  1:7837333/1‑93 (MQ=255)

                                            aTTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTc                                             <  1:3325741/93‑1 (MQ=255)

                                              tttCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCtt                                           >  2:29679/1‑93 (MQ=255)

                                              tttCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCtt                                           <  2:4093040/93‑1 (MQ=255)

                                               ttCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCttt                                          <  2:4123530/93‑1 (MQ=255)

                                                tCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTtg                                         <  1:1147130/93‑1 (MQ=255)

                                                tCAGCTGCGGTTTCACCGATGCACAGACCCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTtg                                         <  2:4343927/93‑1 (MQ=255)

                                                  aGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTtgtg                                       >  2:6638033/1‑93 (MQ=255)

                                                   gCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTgg                                      <  2:5118103/93‑1 (MQ=255)

                                                   gCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTgg                                      <  2:3236911/93‑1 (MQ=255)

                                                    cTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCTCGATCAGTTCGTCAGATTCTTTGTGGt                                     <  2:1160585/93‑1 (MQ=255)

                                                    cTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGt                                     <  1:4062943/93‑1 (MQ=255)

                                                     ttCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTa                                    >  2:8677168/1‑93 (MQ=255)

                                                     ttCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTa                                    >  1:6408587/1‑93 (MQ=255)

                                                      tCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTaa                                   >  2:7708186/1‑93 (MQ=255)

                                                      tCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTaa                                   <  1:2151819/93‑1 (MQ=255)

                                                      tCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTaa                                   >  1:7712589/1‑93 (MQ=255)

                                                       cGGTTTCCCCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAg                                  <  2:6725903/93‑1 (MQ=255)

                                                       cGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAg                                  >  1:2477708/1‑93 (MQ=255)

                                                         gTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTa                                <  1:64973/93‑1 (MQ=255)

                                                         gTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTa                                <  1:4769826/93‑1 (MQ=255)

                                                           ttCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTacg                              >  2:4012549/1‑93 (MQ=255)

                                                             cACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTacgac                            <  1:6972214/93‑1 (MQ=255)

                                                              aCCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTacgacg                           >  2:7564296/1‑93 (MQ=255)

                                                              aCCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTacgacg                           <  2:1804480/93‑1 (MQ=255)

                                                               ccGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGt                          <  2:8103521/93‑1 (MQ=255)

                                                                cGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGtt                         <  2:6091389/93‑1 (MQ=255)

                                                                  aTGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCa                       <  1:895542/93‑1 (MQ=255)

                                                                  aTGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCa                       >  2:3165802/1‑93 (MQ=255)

                                                                   tGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCag                      >  1:3831240/1‑93 (MQ=255)

                                                                   tGCACAGAACCGGAGGCAGGCCCCGCTCTTTCAGCCCCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCag                      <  1:1576585/93‑1 (MQ=255)

                                                                     cacaGAACCGGAGTCAGGCCCCGCTCTTTCAGGACCGCGCATTTTTTCGCGCTCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCagtg                    >  2:4483055/1‑91 (MQ=255)

                                                                     cacaGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCagag                    <  2:723757/93‑1 (MQ=255)

                                                                     cacaGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCagag                    <  1:453963/93‑1 (MQ=255)

                                                                     cacaGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCagag                    <  1:7546935/93‑1 (MQ=255)

                                                                     cacaGAACCGGAGTCAGGCCCCGCTCGTTCAGCCCGGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCagag                    <  2:8375367/93‑1 (MQ=255)

                                                                      acaGAACCGGAGTCAGGCCCCGCTCTTTCAGCTCCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGt                   <  1:4959328/93‑1 (MQ=255)

                                                                      acaGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGt                   <  2:3088650/93‑1 (MQ=255)

                                                                      acaGAACCGGAGTCAGGCCCAGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGt                   <  1:4195989/93‑1 (MQ=255)

                                                                         gAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGAc                <  2:2481349/93‑1 (MQ=255)

                                                                         gAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGAc                <  1:2560765/93‑1 (MQ=255)

                                                                         gAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGAc                <  1:2647581/93‑1 (MQ=255)

                                                                         gAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGAc                >  2:6225871/1‑93 (MQ=255)

                                                                            ccGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCga             <  2:260664/93‑1 (MQ=255)

                                                                                 gTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCgatgatg        >  2:8761331/1‑93 (MQ=255)

                                                                                  tCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCgatgatga       <  1:1767012/93‑1 (MQ=255)

                                                                                  gcAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCgatgatga       <  1:4657295/92‑1 (MQ=255)

                                                                                   cAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCgatgatgat      <  2:138287/93‑1 (MQ=255)

                                                                                       ccccGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTAc  <  2:5852573/93‑1 (MQ=255)

                                                                                       ccccGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTAc  <  2:5418498/93‑1 (MQ=255)

                                                                                       ccccGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTAc  <  1:5534612/93‑1 (MQ=255)

                                                                                       ccccGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTAc  <  2:8277249/93‑1 (MQ=255)

                                                                                       ccccGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTAc  <  2:197684/93‑1 (MQ=255)

GCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCTGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTAC  >  NC_000913/4108642‑4108821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ACCGCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCTGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACTGTG  >  NC_000913/4108639‑4108825

ACCGCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCC                                                                                               >  SRR4302541.2721849/1‑94 (MQ=60)

ACCGCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCC                                                                                               >  SRR4302541.630697/1‑94 (MQ=60)

ACCGCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCC                                                                                               <  SRR4302541.3358126/94‑1 (MQ=60)

ACCGCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCC                                                                                               <  SRR4302541.4888587/94‑1 (MQ=60)

 CCGCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCG                                                                                              <  SRR4302541.1745846/94‑1 (MQ=60)

   CCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCT                                                                                            <  SRR4302541.2917414/94‑1 (MQ=60)

    CGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTC                                                                                           >  SRR4302541.4612588/1‑94 (MQ=60)

    CGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTC                                                                                           >  SRR4302541.1897459/1‑94 (MQ=60)

     GTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCT                                                                                          <  SRR4302541.7180489/94‑1 (MQ=60)

     GGCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCT                                                                                          <  SRR4302541.7180490/94‑1 (MQ=60)

      TCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTT                                                                                         >  SRR4302541.8870463/1‑94 (MQ=60)

       CGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTT                                                                                        >  SRR4302541.5784007/1‑94 (MQ=60)

        GATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTC                                                                                       <  SRR4302541.909726/94‑1 (MQ=60)

        GATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTC                                                                                       >  SRR4302541.8506686/1‑94 (MQ=60)

        GATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTC                                                                                       >  SRR4302541.2975874/1‑94 (MQ=60)

        GATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTC                                                                                       <  SRR4302541.2145261/94‑1 (MQ=60)

        GATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTC                                                                                       <  SRR4302541.7259699/94‑1 (MQ=60)

        GATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCGTCGGTTTCACCGATGCACAGAACCGGAGGCAGGCCCCGCTCTTTC                                                                                       >  SRR4302541.7888684/1‑94 (MQ=60)

         ATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCA                                                                                      <  SRR4302541.5469890/94‑1 (MQ=60)

         ATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCA                                                                                      <  SRR4302541.5038146/94‑1 (MQ=60)

         ATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCA                                                                                      <  SRR4302541.4134312/94‑1 (MQ=60)

         ATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCA                                                                                      >  SRR4302541.6012857/1‑94 (MQ=60)

          TCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAG                                                                                     <  SRR4302541.8193108/94‑1 (MQ=60)

          TCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAG                                                                                     <  SRR4302541.2530457/94‑1 (MQ=60)

          TCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAG                                                                                     <  SRR4302541.2307061/94‑1 (MQ=60)

          TCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAG                                                                                     >  SRR4302541.6187572/1‑94 (MQ=60)

          ACTGACGTGCGCAAACTTCTTCAGTTTTGCGCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAG                                                                                     <  SRR4302541.6533077/94‑1 (MQ=60)

            TGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCA                                                                                   <  SRR4302541.5137454/94‑1 (MQ=60)

             GACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCAC                                                                                  <  SRR4302541.2119753/94‑1 (MQ=60)

             GACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCAC                                                                                  >  SRR4302541.3627361/1‑94 (MQ=60)

              ACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGAACC                                                                                 >  SRR4302541.8101502/1‑94 (MQ=60)

               CGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCG                                                                                <  SRR4302541.5000906/94‑1 (MQ=60)

                GTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGC                                                                               >  SRR4302541.703482/1‑94 (MQ=60)

                GTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGC                                                                               >  SRR4302541.7691646/1‑94 (MQ=60)

                  GCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGA                                                                             >  SRR4302541.8896695/1‑94 (MQ=60)

                   CGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAA                                                                            <  SRR4302541.6922671/94‑1 (MQ=60)

                    GCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAT                                                                           <  SRR4302541.5568060/94‑1 (MQ=60)

                    GCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAT                                                                           <  SRR4302541.5689376/94‑1 (MQ=60)

                    GCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAAT                                                                           >  SRR4302541.5307120/1‑94 (MQ=60)

                     CAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATT                                                                          <  SRR4302541.3251143/94‑1 (MQ=60)

                     CAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATT                                                                          <  SRR4302541.2208035/94‑1 (MQ=60)

                     CAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATT                                                                          <  SRR4302541.4621947/94‑1 (MQ=60)

                      AAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTT                                                                         >  SRR4302541.5231067/1‑94 (MQ=60)

                      AAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTT                                                                         <  SRR4302541.8901607/94‑1 (MQ=60)

                      AAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTT                                                                         >  SRR4302541.5231065/1‑94 (MQ=60)

                      AAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTCCAGCACCGCGAATTT                                                                         >  SRR4302541.946279/1‑94 (MQ=60)

                       AACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTT                                                                        <  SRR4302541.4220223/94‑1 (MQ=60)

                       AACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTT                                                                        <  SRR4302541.1211756/94‑1 (MQ=60)

                       AACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTT                                                                        <  SRR4302541.1211754/94‑1 (MQ=60)

                        ACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTT                                                                       <  SRR4302541.7617747/94‑1 (MQ=60)

                         CTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGACTTTTTT                                                                      >  SRR4302541.8723068/1‑94 (MQ=60)

                         CTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTT                                                                      <  SRR4302541.8138440/94‑1 (MQ=60)

                         CTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTT                                                                      >  SRR4302541.2666875/1‑94 (MQ=60)

                         CTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTT                                                                      >  SRR4302541.6977419/1‑94 (MQ=60)

                         CTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTT                                                                      >  SRR4302541.661724/1‑94 (MQ=60)

                          TTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTC                                                                     <  SRR4302541.3272750/94‑1 (MQ=60)

                           TCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCG                                                                    <  SRR4302541.1337/94‑1 (MQ=60)

                           TCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCG                                                                    <  SRR4302541.7954228/94‑1 (MQ=60)

                           TCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCG                                                                    <  SRR4302541.7954229/94‑1 (MQ=60)

                            CTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGC                                                                   <  SRR4302541.7996256/94‑1 (MQ=60)

                            CTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGC                                                                   >  SRR4302541.7577105/1‑94 (MQ=60)

                             TTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCG                                                                  >  SRR4302541.3397506/1‑94 (MQ=60)

                                AGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATC                                                               >  SRR4302541.4761121/1‑94 (MQ=60)

                                AGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATC                                                               <  SRR4302541.7021292/94‑1 (MQ=60)

                                 GTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCA                                                              <  SRR4302541.1167656/94‑1 (MQ=60)

                                 GTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCA                                                              <  SRR4302541.5236996/94‑1 (MQ=60)

                                  TTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAG                                                             <  SRR4302541.1045592/94‑1 (MQ=60)

                                  TTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAG                                                             >  SRR4302541.8302342/1‑94 (MQ=60)

                                  TTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAG                                                             <  SRR4302541.5786372/94‑1 (MQ=60)

                                   TTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGT                                                            <  SRR4302541.7790124/94‑1 (MQ=60)

                                    TTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTT                                                           <  SRR4302541.392331/94‑1 (MQ=60)

                                     TGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTC                                                          >  SRR4302541.2431966/1‑94 (MQ=60)

                                      TCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCG                                                         <  SRR4302541.19743/94‑1 (MQ=60)

                                      GCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCG                                                         >  SRR4302541.6659319/1‑94 (MQ=60)

                                       CCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGT                                                        <  SRR4302541.6409214/94‑1 (MQ=60)

                                       CCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGT                                                        >  SRR4302541.3482191/1‑94 (MQ=60)

                                       CCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGT                                                        >  SRR4302541.8091970/1‑94 (MQ=60)

                                        CCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTC                                                       <  SRR4302541.3400319/94‑1 (MQ=60)

                                         CGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCA                                                      >  SRR4302541.6118134/1‑94 (MQ=60)

                                         CGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCA                                                      >  SRR4302541.1743511/1‑94 (MQ=60)

                                         CGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCA                                                      >  SRR4302541.2452001/1‑94 (MQ=60)

                                           CTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGA                                                    >  SRR4302541.1123422/1‑94 (MQ=60)

                                           CTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGA                                                    >  SRR4302541.648170/1‑94 (MQ=60)

                                            TTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGAT                                                   >  SRR4302541.3596875/1‑94 (MQ=60)

                                            TTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGACCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGAT                                                   >  SRR4302541.1510933/1‑94 (MQ=60)

                                              CATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGTTCAGTTCGTCAGATTC                                                 >  SRR4302541.7922883/1‑94 (MQ=60)

                                               ATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCT                                                <  SRR4302541.3359070/94‑1 (MQ=60)

                                               ATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCT                                                <  SRR4302541.4555523/94‑1 (MQ=60)

                                               ATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGATCTTTCAGCACCGCGACTTTTTTAGCGATCAGTTCGTCATATTCT                                                >  SRR4302541.8452722/1‑94 (MQ=60)

                                                TTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTT                                               <  SRR4302541.2543320/94‑1 (MQ=60)

                                                 TTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTT                                              <  SRR4302541.1482047/94‑1 (MQ=60)

                                                  TTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTG                                             >  SRR4302541.2634490/1‑94 (MQ=60)

                                                  TTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTG                                             >  SRR4302541.6129998/1‑94 (MQ=60)

                                                  TTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTG                                             <  SRR4302541.6073051/94‑1 (MQ=60)

                                                   TCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGT                                            >  SRR4302541.2590300/1‑94 (MQ=60)

                                                   TCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGT                                            <  SRR4302541.237497/94‑1 (MQ=60)

                                                   TCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGT                                            <  SRR4302541.1158056/94‑1 (MQ=60)

                                                     AGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGG                                          >  SRR4302541.5555290/1‑94 (MQ=60)

                                                      GCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGT                                         >  SRR4302541.3853745/1‑94 (MQ=60)

                                                      GCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATATTTTCGCGATCAGTTCGTCAGATTCTTTGTGGC                                         >  SRR4302541.8596425/1‑94 (MQ=60)

                                                       CTTCGGTTTCACCGATGCACAGACCCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTA                                        <  SRR4302541.1669575/94‑1 (MQ=60)

                                                       CTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTA                                        >  SRR4302541.7718157/1‑94 (MQ=60)

                                                       CTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTA                                        >  SRR4302541.6473954/1‑94 (MQ=60)

                                                       CTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTA                                        <  SRR4302541.6599602/94‑1 (MQ=60)

                                                       CTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTA                                        <  SRR4302541.4103040/94‑1 (MQ=60)

                                                       CTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTA                                        >  SRR4302541.3889568/1‑94 (MQ=60)

                                                        TTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAA                                       >  SRR4302541.7794620/1‑94 (MQ=60)

                                                        TTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAA                                       >  SRR4302541.1722478/1‑94 (MQ=60)

                                                         TCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAG                                      >  SRR4302541.2502551/1‑94 (MQ=60)

                                                         TCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAG                                      <  SRR4302541.2172625/94‑1 (MQ=60)

                                                         TCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAG                                      <  SRR4302541.1550592/94‑1 (MQ=60)

                                                         TCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAG                                      <  SRR4302541.1550591/94‑1 (MQ=60)

                                                         TCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAG                                      <  SRR4302541.6220408/94‑1 (MQ=60)

                                                           GGTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTA                                    <  SRR4302541.3397579/94‑1 (MQ=60)

                                                            GTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTAC                                   <  SRR4302541.4818529/94‑1 (MQ=60)

                                                            GTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTAC                                   >  SRR4302541.2335219/1‑94 (MQ=60)

                                                            GTTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTAC                                   <  SRR4302541.65502/94‑1 (MQ=60)

                                                             TTTCACCGATGCACAGAACTGGAGTCGAGCCCTGCTTTTTCAGCACCGCGAATGTTTTCGCGATCAGTTCGTTAGATTCTTTGTGGTAAGTACG                                  <  SRR4302541.1160504/94‑1 (MQ=60)

                                                             TTTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACG                                  <  SRR4302541.7703024/94‑1 (MQ=60)

                                                              TTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGA                                 >  SRR4302541.2967371/1‑94 (MQ=60)

                                                              TTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGA                                 <  SRR4302541.1003210/94‑1 (MQ=60)

                                                              TTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGA                                 >  SRR4302541.8781792/1‑94 (MQ=60)

                                                              TTCACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGA                                 >  SRR4302541.8143662/1‑94 (MQ=60)

                                                               TCACCGATGCACACAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGAC                                <  SRR4302541.237019/94‑1 (MQ=60)

                                                                CACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACG                               <  SRR4302541.7046514/94‑1 (MQ=60)

                                                                 ACCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGT                              >  SRR4302541.4012148/1‑94 (MQ=60)

                                                                  CCGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTT                             <  SRR4302541.4874042/94‑1 (MQ=60)

                                                                   CGATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTC                            >  SRR4302541.660291/1‑94 (MQ=60)

                                                                    GATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCA                           <  SRR4302541.1104272/94‑1 (MQ=60)

                                                                     ATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAG                          <  SRR4302541.903790/94‑1 (MQ=60)

                                                                     ATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAG                          <  SRR4302541.5439548/94‑1 (MQ=60)

                                                                     ATGCACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAG                          >  SRR4302541.3869838/1‑94 (MQ=60)

                                                                      TGCACAGAACCGGAGGCAGGCCCCGCTCTTTCAGCCCCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGA                         <  SRR4302541.1592339/94‑1 (MQ=60)

                                                                        CACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGT                       >  SRR4302541.2278344/1‑94 (MQ=60)

                                                                        CACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGT                       <  SRR4302541.7627588/94‑1 (MQ=60)

                                                                        CACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGT                       <  SRR4302541.458291/94‑1 (MQ=60)

                                                                        CACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGT                       <  SRR4302541.7627589/94‑1 (MQ=60)

                                                                        CACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGT                       >  SRR4302541.3365921/1‑94 (MQ=60)

                                                                         ACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCTCCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTG                      <  SRR4302541.5010081/94‑1 (MQ=60)

                                                                         ACAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTG                      >  SRR4302541.1839282/1‑94 (MQ=60)

                                                                         ACAGAACCGGAGTCAGGCCCAGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTG                      <  SRR4302541.4237666/94‑1 (MQ=60)

                                                                          CAGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGA                     >  SRR4302541.1482972/1‑94 (MQ=60)

                                                                           AGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTTGTAAGTACGACGTTCAGAGTGAC                    <  SRR4302541.6074022/94‑1 (MQ=60)

                                                                           AGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGAC                    <  SRR4302541.4302733/94‑1 (MQ=60)

                                                                           AGAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGAC                    >  SRR4302541.904704/1‑94 (MQ=60)

                                                                            GAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACC                   <  SRR4302541.2673939/94‑1 (MQ=60)

                                                                            GAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACC                   <  SRR4302541.5668116/94‑1 (MQ=60)

                                                                            GAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACC                   <  SRR4302541.2586434/94‑1 (MQ=60)

                                                                            GAACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACC                   <  SRR4302541.644824/94‑1 (MQ=60)

                                                                             AACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCG                  >  SRR4302541.5445193/1‑94 (MQ=60)

                                                                             AACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCG                  <  SRR4302541.8094217/94‑1 (MQ=60)

                                                                             AACCGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCG                  <  SRR4302541.4809436/94‑1 (MQ=60)

                                                                                CGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCccgtcaggttggtcggttccttttgggtaagtacaacgttcagagtgcccgttg               >  SRR4302541.5683394/1‑40 (MQ=60)

                                                                                CGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATG               <  SRR4302541.591576/94‑1 (MQ=60)

                                                                                CGGAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATG               <  SRR4302541.7636832/94‑1 (MQ=60)

                                                                                  GAGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGAT             >  SRR4302541.365293/1‑94 (MQ=60)

                                                                                   AGTCAGGCCCCGCTCTTTCAGCCCCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATG            <  SRR4302541.2125695/94‑1 (MQ=60)

                                                                                   AGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATG            >  SRR4302541.2490766/1‑94 (MQ=60)

                                                                                   AGTCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATG            <  SRR4302541.6165563/94‑1 (MQ=60)

                                                                                     TCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGAT          <  SRR4302541.1784197/94‑1 (MQ=60)

                                                                                     TCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGAT          <  SRR4302541.6886843/94‑1 (MQ=60)

                                                                                     TCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGAT          >  SRR4302541.4579283/1‑94 (MQ=60)

                                                                                     GCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGAT          <  SRR4302541.4704715/94‑1 (MQ=60)

                                                                                     GCAGGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGAT          <  SRR4302541.4890329/94‑1 (MQ=60)

                                                                                        GGCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTA       >  SRR4302541.7130336/1‑94 (MQ=60)

                                                                                         GCCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTAC      >  SRR4302541.8439905/1‑94 (MQ=60)

                                                                                          CCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACT     >  SRR4302541.4439234/1‑94 (MQ=60)

                                                                                          CCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACT     >  SRR4302541.4227821/1‑94 (MQ=60)

                                                                                          CCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACT     <  SRR4302541.5433576/94‑1 (MQ=60)

                                                                                          CCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACT     <  SRR4302541.5591266/94‑1 (MQ=60)

                                                                                          CCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACT     <  SRR4302541.7863204/94‑1 (MQ=60)

                                                                                          CCCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACT     >  SRR4302541.990298/1‑94 (MQ=60)

                                                                                           CCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACTG    <  SRR4302541.3442483/94‑1 (MQ=60)

                                                                                           CCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACTG    >  SRR4302541.8841053/1‑94 (MQ=60)

                                                                                           CCCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACTG    >  SRR4302541.6802046/1‑94 (MQ=60)

                                                                                            CCGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACTGT   >  SRR4302541.5216839/1‑94 (MQ=60)

                                                                                             CGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACTGTG  <  SRR4302541.1464767/94‑1 (MQ=60)

ACCGCGTCGATCTGACGTGCGCAAACTTCTTCAGTTTTGCCCGCTTCATTTTCAGCTTCGGTTTCACCGATGCACAGAACCGGAGTCAGGCCCTGCTCTTTCAGCACCGCGAATTTTTTCGCGATCAGTTCGTCAGATTCTTTGTGGTAAGTACGACGTTCAGAGTGACCGATGATGATGTACTGTG  >  NC_000913/4108639‑4108825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`