Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,109,226	A→G	L190P (CTA→CCA)	yiiQ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,109,226	0	A	G	99.7%	1164.6 / ‑6.0	336	L190P (CTA→CCA)	yiiQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (187/148); total (188/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 341 total aligned reads displayed.

AGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTG  >  NC_000913/4109136‑4109315

  ggCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGgcgc                                                                                       <  2:6717737/93‑1 (MQ=255)

   gcagcaGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGcc                                                                                      >  1:2738898/1‑93 (MQ=255)

     agcagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAg                                                                                    <  2:5959463/93‑1 (MQ=255)

     agcagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAg                                                                                    >  1:4004823/1‑93 (MQ=255)

      gcagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGc                                                                                   >  1:293429/1‑93 (MQ=255)

       cagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCt                                                                                  <  2:5818855/93‑1 (MQ=255)

       cagGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCt                                                                                  <  2:2031239/93‑1 (MQ=255)

        agGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCtt                                                                                 >  2:3356641/1‑93 (MQ=255)

         ggTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTa                                                                                >  1:7706793/1‑93 (MQ=255)

         ggTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTa                                                                                >  2:2988317/1‑93 (MQ=255)

         ggTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTa                                                                                >  2:1798098/1‑93 (MQ=255)

          gTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTaa                                                                               <  2:5354870/93‑1 (MQ=255)

           tCTGTGGAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAAt                                                                              >  1:7502668/1‑93 (MQ=255)

           tCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAAt                                                                              >  2:2849644/1‑93 (MQ=255)

           gcTGTGTAACAGTATAGAGATTCAACGGCACAAAGGCTTCGCTTTTTGTCATTTATTTAATTCTTCAAGCGATTCAGATGGCGCCAGCTTatt                                                                              >  2:7808120/2‑91 (MQ=255)

            cTGTGAAACAGTATAGAGATTCATCGGCCCGAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATc                                                                             <  1:3030082/93‑1 (MQ=255)

             tgtgAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCg                                                                            >  1:1018270/1‑93 (MQ=255)

                gAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGtt                                                                         <  2:6262201/93‑1 (MQ=255)

                 aaaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTc                                                                        <  2:440087/93‑1 (MQ=255)

                 aaaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTc                                                                        <  1:651386/93‑1 (MQ=255)

                 aaaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTCCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTc                                                                        <  1:3535541/93‑1 (MQ=255)

                  aaCAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCa                                                                       >  2:8452078/1‑93 (MQ=255)

                     aGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACa                                                                    <  2:4015015/93‑1 (MQ=255)

                      gTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAg                                                                   >  2:1517193/1‑93 (MQ=255)

                       tataGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGc                                                                  <  2:5067234/93‑1 (MQ=255)

                        ataGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCg                                                                 >  1:4930410/1‑93 (MQ=255)

                          agagATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGaa                                                               <  1:1344219/93‑1 (MQ=255)

                           gagaTTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAg                                                              >  1:2521166/1‑93 (MQ=255)

                            agaTTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAgg                                                             <  1:6400352/93‑1 (MQ=255)

                               ttCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCa                                                          <  2:1939010/93‑1 (MQ=255)

                                tCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAg                                                         <  1:5410578/93‑1 (MQ=255)

                                  aTCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGcc                                                       <  2:4305795/93‑1 (MQ=255)

                                   tCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGccc                                                      >  2:1288626/1‑93 (MQ=255)

                                     ggCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCt                                                    >  2:7313013/1‑93 (MQ=255)

                                      gCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCtt                                                   <  2:5590687/93‑1 (MQ=255)

                                       cacaAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTAAACAGCGAAGGTCAGCCCCttt                                                  >  1:7120900/1‑93 (MQ=255)

                                         caAAGGCTTTGCTTTTTGTCATTTATTCAAGCCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTc                                                <  2:3974724/93‑1 (MQ=255)

                                         caAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTc                                                >  1:7015391/1‑93 (MQ=255)

                                         caAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTc                                                >  2:6458604/1‑93 (MQ=255)

                                          aaaGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCg                                               >  1:1197288/1‑93 (MQ=255)

                                          aaaGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCg                                               >  2:5770717/1‑93 (MQ=255)

                                           aaGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGc                                              >  2:7412135/1‑93 (MQ=255)

                                           aaGGCGTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGc                                              <  2:8378134/93‑1 (MQ=255)

                                            aGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGcc                                             >  2:6082846/1‑93 (MQ=255)

                                             ggCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCg                                            >  2:8536434/1‑93 (MQ=255)

                                             ggCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCg                                            >  2:6145660/1‑93 (MQ=255)

                                              gctttgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGt                                           <  1:5291942/93‑1 (MQ=255)

                                               ctttgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGtt                                          <  2:3857979/93‑1 (MQ=255)

                                                tttgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTg                                         >  1:6038798/1‑93 (MQ=255)

                                                  tgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTc                                       <  2:4793344/93‑1 (MQ=255)

                                                  tgctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTc                                       >  1:5152983/1‑93 (MQ=255)

                                                    ctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcg                                     <  2:92863/93‑1 (MQ=255)

                                                    ctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcg                                     <  1:3418324/93‑1 (MQ=255)

                                                    ctttTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcg                                     <  1:4975260/93‑1 (MQ=255)

                                                     tttttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcgc                                    >  1:8460934/1‑93 (MQ=255)

                                                     tttttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcgc                                    <  1:7414635/93‑1 (MQ=255)

                                                      ttttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcgcg                                   >  2:3513153/1‑93 (MQ=255)

                                                      ttttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCcgcg                                   >  1:8140889/1‑93 (MQ=255)

                                                       tttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGa                                  >  1:7907831/1‑93 (MQ=255)

                                                       tttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGa                                  <  2:2526809/93‑1 (MQ=255)

                                                       tttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGa                                  >  2:3024959/1‑93 (MQ=255)

                                                        ttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGac                                 >  2:600803/1‑93 (MQ=255)

                                                        ttGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGac                                 >  2:4337772/1‑93 (MQ=255)

                                                        ttGTAATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCACCAGCGCAGGTCAGCCCCTTTTAGCCGTTGTCCGCGac                                 >  2:2390322/1‑93 (MQ=255)

                                                         tGTCATTTATTCAAACCTTAAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGaca                                >  1:6233765/1‑93 (MQ=255)

                                                          gTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGacaa                               <  2:6863848/93‑1 (MQ=255)

                                                           tCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGacaac                              <  1:795294/93‑1 (MQ=255)

                                                            cATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGacaaca                             <  2:7211138/93‑1 (MQ=255)

                                                            cATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGacaaca                             >  1:3839958/1‑93 (MQ=255)

                                                              tttATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATa                           >  1:6704226/1‑93 (MQ=255)

                                                                tATTCAATCCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAAc                         <  2:3712585/93‑1 (MQ=255)

                                                                tATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAAc                         >  1:7169501/1‑93 (MQ=255)

                                                                 aTTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACg                        >  1:185750/1‑93 (MQ=255)

                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACga                       >  1:7662552/1‑92 (MQ=255)

                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGc                       >  2:1171793/1‑93 (MQ=255)

                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGc                       >  1:5977832/1‑93 (MQ=255)

                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGc                       <  1:4878710/93‑1 (MQ=255)

                                                                  ttCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGc                       <  1:1512283/93‑1 (MQ=255)

                                                                   tCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCa                      <  2:8691058/93‑1 (MQ=255)

                                                                    cAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAg                     <  1:6145756/93‑1 (MQ=255)

                                                                       aCCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGc                  >  2:1250721/1‑93 (MQ=255)

                                                                        ccTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTTCa                 >  1:1277242/1‑93 (MQ=255)

                                                                        ccTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCa                 >  1:4344976/1‑93 (MQ=255)

                                                                          ttCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCAcc               >  1:2903907/1‑93 (MQ=255)

                                                                          ttCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCAcc               >  1:8766228/1‑93 (MQ=255)

                                                                          ttCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCAcc               <  2:7648110/93‑1 (MQ=255)

                                                                           tCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCt              <  1:1131853/93‑1 (MQ=255)

                                                                           tCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCt              >  1:3784713/1‑93 (MQ=255)

                                                                              aGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCt           >  2:1674441/1‑93 (MQ=255)

                                                                              aGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCt           >  2:8189901/1‑93 (MQ=255)

                                                                               gCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTg          >  1:3611420/1‑93 (MQ=255)

                                                                                cGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGt         <  1:4138379/93‑1 (MQ=255)

                                                                                cGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGt         >  1:6786646/1‑93 (MQ=255)

                                                                                cGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGt         >  2:1426595/1‑93 (MQ=255)

                                                                                cGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGt         <  2:2276255/93‑1 (MQ=255)

                                                                                 gATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGtc        >  1:5788183/1‑93 (MQ=255)

                                                                                 gATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGtc        <  1:3896730/93‑1 (MQ=255)

                                                                                 gATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGtc        >  2:8049232/1‑93 (MQ=255)

                                                                                      aGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGgt   <  2:1649928/93‑1 (MQ=255)

                                                                                       gATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGgtg  >  1:6851063/1‑93 (MQ=255)

AGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTG  >  NC_000913/4109136‑4109315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAAT  >  NC_000913/4109133‑4109319

CGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATG                                                                                               >  SRR4302541.3225761/1‑94 (MQ=60)

 GTAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGG                                                                                              <  SRR4302541.6446483/94‑1 (MQ=60)

 GCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGG                                                                                              <  SRR4302541.6622691/94‑1 (MQ=60)

 CCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGG                                                                                              <  SRR4302541.7006092/94‑1 (MQ=60)

  CAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGC                                                                                             <  SRR4302541.47552/94‑1 (MQ=60)

   AGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCG                                                                                            >  SRR4302541.2358603/1‑94 (MQ=60)

     GGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCC                                                                                          >  SRR4302541.2766358/1‑94 (MQ=60)

      GCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCA                                                                                         >  SRR4302541.1296088/1‑94 (MQ=60)

       CAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAG                                                                                        <  SRR4302541.3845519/94‑1 (MQ=60)

       CAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAG                                                                                        >  SRR4302541.4044449/1‑94 (MQ=60)

        AGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGC                                                                                       >  SRR4302541.295978/1‑94 (MQ=60)

        AGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGC                                                                                       >  SRR4302541.2804520/1‑94 (MQ=60)

          CAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTT                                                                                     >  SRR4302541.7528296/1‑94 (MQ=60)

          CAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTT                                                                                     <  SRR4302541.2664814/94‑1 (MQ=60)

          CAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTT                                                                                     >  SRR4302541.5740665/1‑94 (MQ=60)

          CAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTT                                                                                     >  SRR4302541.1202823/1‑94 (MQ=60)

          CAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTT                                                                                     <  SRR4302541.8414128/94‑1 (MQ=60)

          CAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTT                                                                                     >  SRR4302541.5740666/1‑94 (MQ=60)

           AGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTA                                                                                    <  SRR4302541.1370446/94‑1 (MQ=60)

           AGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTA                                                                                    <  SRR4302541.4308825/94‑1 (MQ=60)

           AGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTA                                                                                    >  SRR4302541.7788754/1‑94 (MQ=60)

           AGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTA                                                                                    <  SRR4302541.6217115/94‑1 (MQ=60)

             GTCTGTGGAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAAT                                                                                  >  SRR4302541.7582863/1‑94 (MQ=60)

             GTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAAT                                                                                  >  SRR4302541.1272466/1‑94 (MQ=60)

             GTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAAT                                                                                  <  SRR4302541.2532736/94‑1 (MQ=60)

              TCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATC                                                                                 >  SRR4302541.6136088/1‑94 (MQ=60)

              TCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATC                                                                                 >  SRR4302541.2825109/1‑94 (MQ=60)

               CTGTGAAACAGTATAGAGATTCATCGGCCCGAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCG                                                                                <  SRR4302541.3060671/94‑1 (MQ=60)

               CTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCG                                                                                >  SRR4302541.7611849/1‑94 (MQ=60)

               CTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCG                                                                                >  SRR4302541.1027681/1‑94 (MQ=60)

                TGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGG                                                                               <  SRR4302541.1147822/94‑1 (MQ=60)

                 GTGAAACATTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGT                                                                              >  SRR4302541.38315/1‑94 (MQ=60)

                  TGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTT                                                                             <  SRR4302541.531386/94‑1 (MQ=60)

                  TGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTT                                                                             <  SRR4302541.7369690/94‑1 (MQ=60)

                   GAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTC                                                                            <  SRR4302541.5434480/94‑1 (MQ=60)

                   GAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTC                                                                            <  SRR4302541.5912310/94‑1 (MQ=60)

                    AAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCA                                                                           <  SRR4302541.657535/94‑1 (MQ=60)

                    AAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTCCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCA                                                                           <  SRR4302541.3571189/94‑1 (MQ=60)

                     AACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAA                                                                          <  SRR4302541.5459741/94‑1 (MQ=60)

                     AACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAA                                                                          >  SRR4302541.4221538/1‑94 (MQ=60)

                        AGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAG                                                                       >  SRR4302541.8018873/1‑94 (MQ=60)

                        AGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAG                                                                       >  SRR4302541.2970610/1‑94 (MQ=60)

                          TATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCG                                                                     >  SRR4302541.1304686/1‑94 (MQ=60)

                          TATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCG                                                                     >  SRR4302541.4980723/1‑94 (MQ=60)

                           ATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGA                                                                    <  SRR4302541.8016509/94‑1 (MQ=60)

                            TAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAA                                                                   >  SRR4302541.6521731/1‑94 (MQ=60)

                            TAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAA                                                                   >  SRR4302541.6559733/1‑94 (MQ=60)

                            TAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAA                                                                   >  SRR4302541.1211636/1‑94 (MQ=60)

                             AGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAG                                                                  <  SRR4302541.1357468/94‑1 (MQ=60)

                             AGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAG                                                                  >  SRR4302541.2546536/1‑94 (MQ=60)

                              GAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGG                                                                 >  SRR4302541.5595822/1‑94 (MQ=60)

                               AGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTCATCGGTTCAACAGCGAAGGT                                                                >  SRR4302541.3380331/1‑94 (MQ=60)

                               AGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGT                                                                <  SRR4302541.394575/94‑1 (MQ=60)

                               AGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGT                                                                <  SRR4302541.6465668/94‑1 (MQ=60)

                                  TTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAG                                                             >  SRR4302541.2935964/1‑94 (MQ=60)

                                   TCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGC                                                            <  SRR4302541.5466073/94‑1 (MQ=60)

                                    CATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCC                                                           >  SRR4302541.4029937/1‑94 (MQ=60)

                                    CATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCC                                                           >  SRR4302541.7671052/1‑94 (MQ=60)

                                    CATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCC                                                           >  SRR4302541.1590592/1‑94 (MQ=60)

                                    CATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCC                                                           <  SRR4302541.6917987/94‑1 (MQ=60)

                                       CGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCT                                                        <  SRR4302541.1378720/94‑1 (MQ=60)

                                        GGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTT                                                       <  SRR4302541.1511151/94‑1 (MQ=60)

                                         GCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTAAACAGCGAAGGTCAGCCCCTTT                                                      >  SRR4302541.7196751/1‑94 (MQ=60)

                                          CACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTT                                                     >  SRR4302541.4076095/1‑94 (MQ=60)

                                          CACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTT                                                     <  SRR4302541.4954488/94‑1 (MQ=60)

                                           ACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGCTTCAGATGGCGCCAGCTTACTCGGTTCAACAGCGAAGGTCAACGCCTTTTC                                                    >  SRR4302541.6349605/1‑94 (MQ=60)

                                           ACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTC                                                    <  SRR4302541.4568055/94‑1 (MQ=60)

                                           ACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTC                                                    >  SRR4302541.7089996/1‑94 (MQ=60)

                                            CAAAGGCTTTGCTTTTTGTCATTTCTTCAAACCTTCCAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCACCTTTTCG                                                   >  SRR4302541.3568116/1‑94 (MQ=60)

                                            CAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCG                                                   >  SRR4302541.1208904/1‑94 (MQ=60)

                                              AAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCC                                                 <  SRR4302541.7223597/94‑1 (MQ=60)

                                               AGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCG                                                >  SRR4302541.5275687/1‑94 (MQ=60)

                                                GGCTTTGCTTGTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGT                                               <  SRR4302541.3523504/94‑1 (MQ=60)

                                                 GCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTT                                              <  SRR4302541.8392843/94‑1 (MQ=60)

                                                 GCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTT                                              <  SRR4302541.5346423/94‑1 (MQ=60)

                                                 GCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTT                                              >  SRR4302541.4648925/1‑94 (MQ=60)

                                                  CTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTG                                             >  SRR4302541.6100611/1‑94 (MQ=60)

                                                  CTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTG                                             >  SRR4302541.6100612/1‑94 (MQ=60)

                                                  CTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTG                                             >  SRR4302541.5257525/1‑94 (MQ=60)

                                                   TTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGT                                            >  SRR4302541.3705246/1‑94 (MQ=60)

                                                    TTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTC                                           >  SRR4302541.5205998/1‑94 (MQ=60)

                                                     TGCTTTTTGTCATTTATTCAAACCTTCAAGCGAGTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCC                                          <  SRR4302541.8564604/94‑1 (MQ=60)

                                                      TCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACGGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCG                                         <  SRR4302541.7966163/94‑1 (MQ=60)

                                                      GCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCG                                         <  SRR4302541.4996024/94‑1 (MQ=60)

                                                      GCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCG                                         <  SRR4302541.2941634/94‑1 (MQ=60)

                                                       CTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGC                                        <  SRR4302541.5026254/94‑1 (MQ=60)

                                                       CTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGC                                        <  SRR4302541.5026256/94‑1 (MQ=60)

                                                       CTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGC                                        >  SRR4302541.8552204/1‑94 (MQ=60)

                                                       CTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGC                                        <  SRR4302541.3884500/94‑1 (MQ=60)

                                                       CTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGC                                        <  SRR4302541.3452453/94‑1 (MQ=60)

                                                        TTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCG                                       >  SRR4302541.8229954/1‑94 (MQ=60)

                                                        TTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCG                                       <  SRR4302541.7493928/94‑1 (MQ=60)

                                                         TTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGA                                      >  SRR4302541.7994832/1‑94 (MQ=60)

                                                           TTGTCATTTATTCAAACCTTAAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACA                                    >  SRR4302541.6297463/1‑94 (MQ=60)

                                                            TGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAA                                   <  SRR4302541.1069541/94‑1 (MQ=60)

                                                            TGTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAA                                   >  SRR4302541.6380929/1‑94 (MQ=60)

                                                             GTCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAAC                                  >  SRR4302541.4294024/1‑94 (MQ=60)

                                                              TCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACA                                 <  SRR4302541.802634/94‑1 (MQ=60)

                                                              TCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACA                                 >  SRR4302541.389501/1‑94 (MQ=60)

                                                              TCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACA                                 >  SRR4302541.7935801/1‑94 (MQ=60)

                                                              TCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACA                                 >  SRR4302541.3878631/1‑94 (MQ=60)

                                                              TCATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGACAGCCCCTTTTCGGCGTTGTCCGCGACACCA                                 >  SRR4302541.6047936/1‑94 (MQ=60)

                                                               CATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGACGGGCAGCCCCTTTTCTCCGTTGTCCGCGACAACAT                                >  SRR4302541.6101088/1‑94 (MQ=60)

                                                               CATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACCT                                >  SRR4302541.3722513/1‑94 (MQ=60)

                                                               CATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACAT                                <  SRR4302541.4027920/94‑1 (MQ=60)

                                                               CATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACAT                                >  SRR4302541.3008767/1‑94 (MQ=60)

                                                                ATTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATA                               >  SRR4302541.6774731/1‑94 (MQ=60)

                                                                 TTTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAA                              <  SRR4302541.1647777/94‑1 (MQ=60)

                                                                  TTATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAAC                             >  SRR4302541.7245927/1‑94 (MQ=60)

                                                                   TATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACG                            >  SRR4302541.1219596/1‑94 (MQ=60)

                                                                   TATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACG                            <  SRR4302541.3609589/94‑1 (MQ=60)

                                                                   TATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACG                            <  SRR4302541.4936243/94‑1 (MQ=60)

                                                                   TATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACG                            <  SRR4302541.2554727/94‑1 (MQ=60)

                                                                   TATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACG                            >  SRR4302541.187141/1‑94 (MQ=60)

                                                                    ATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGC                           >  SRR4302541.6038919/1‑94 (MQ=60)

                                                                    ATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGC                           >  SRR4302541.2635121/1‑94 (MQ=60)

                                                                    ATTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGA                           >  SRR4302541.7744098/1‑94 (MQ=60)

                                                                     TTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCA                          <  SRR4302541.7194693/94‑1 (MQ=60)

                                                                     TTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCA                          <  SRR4302541.4928495/94‑1 (MQ=60)

                                                                     TTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCA                          <  SRR4302541.1527328/94‑1 (MQ=60)

                                                                     TTCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCA                          <  SRR4302541.7194692/94‑1 (MQ=60)

                                                                      TCAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAG                         <  SRR4302541.7049954/94‑1 (MQ=60)

                                                                       CAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGT                        <  SRR4302541.8122315/94‑1 (MQ=60)

                                                                       CAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGT                        <  SRR4302541.6208543/94‑1 (MQ=60)

                                                                       CAAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAAAATAACacaga                        >  SRR4302541.6777868/1‑89 (MQ=60)

                                                                        AAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTG                       >  SRR4302541.7987691/1‑94 (MQ=60)

                                                                        AAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTG                       <  SRR4302541.6863529/94‑1 (MQ=60)

                                                                        AAACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTG                       <  SRR4302541.4956517/94‑1 (MQ=60)

                                                                         AACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGC                      >  SRR4302541.7776669/1‑94 (MQ=60)

                                                                         AACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGC                      <  SRR4302541.6837300/94‑1 (MQ=60)

                                                                          ACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTTCA                     >  SRR4302541.6227217/1‑94 (MQ=60)

                                                                          ACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTTCA                     >  SRR4302541.1289923/1‑94 (MQ=60)

                                                                          ACCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCA                     >  SRR4302541.4388358/1‑94 (MQ=60)

                                                                           CCTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCAC                    <  SRR4302541.3275390/94‑1 (MQ=60)

                                                                            CTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACC                   >  SRR4302541.8859964/1‑94 (MQ=60)

                                                                            CTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACC                   >  SRR4302541.8314099/1‑94 (MQ=60)

                                                                            CTTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACC                   >  SRR4302541.2933090/1‑94 (MQ=60)

                                                                             TTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCT                  >  SRR4302541.3822734/1‑94 (MQ=60)

                                                                             TTCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCT                  <  SRR4302541.6758557/94‑1 (MQ=60)

                                                                              TCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTT                 >  SRR4302541.5105720/1‑94 (MQ=60)

                                                                              TCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTT                 <  SRR4302541.1142556/94‑1 (MQ=60)

                                                                              TCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTT                 <  SRR4302541.7518085/94‑1 (MQ=60)

                                                                              TCAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTT                 <  SRR4302541.7636604/94‑1 (MQ=60)

                                                                               CAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTC                >  SRR4302541.3460677/1‑94 (MQ=60)

                                                                               CAAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTC                >  SRR4302541.6174511/1‑94 (MQ=60)

                                                                                AAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCT               >  SRR4302541.3783244/1‑94 (MQ=60)

                                                                                AAGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCT               <  SRR4302541.6371761/94‑1 (MQ=60)

                                                                                 AGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTG              <  SRR4302541.7000482/94‑1 (MQ=60)

                                                                                 AGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTG              >  SRR4302541.3648033/1‑94 (MQ=60)

                                                                                 AGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTG              >  SRR4302541.8093206/1‑94 (MQ=60)

                                                                                 AGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTG              >  SRR4302541.3648032/1‑94 (MQ=60)

                                                                                 AGCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTG              <  SRR4302541.6768343/94‑1 (MQ=60)

                                                                                  GCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGT             <  SRR4302541.7342547/94‑1 (MQ=60)

                                                                                  GCGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGT             >  SRR4302541.6859221/1‑94 (MQ=60)

                                                                                   CGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTC            >  SRR4302541.5847000/1‑94 (MQ=60)

                                                                                   CGATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTC            <  SRR4302541.4179268/94‑1 (MQ=60)

                                                                                    GATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGGCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCT           >  SRR4302541.6802492/1‑94 (MQ=60)

                                                                                    GATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCT           <  SRR4302541.3935748/94‑1 (MQ=60)

                                                                                    GATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCT           >  SRR4302541.1056595/1‑94 (MQ=60)

                                                                                    GATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCT           >  SRR4302541.4143169/1‑94 (MQ=60)

                                                                                    GATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCT           >  SRR4302541.5943879/1‑94 (MQ=60)

                                                                                     ATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTC          <  SRR4302541.7223255/94‑1 (MQ=60)

                                                                                     ATTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTC          >  SRR4302541.6970990/1‑94 (MQ=60)

                                                                                      TTCAGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCG         <  SRR4302541.7775596/94‑1 (MQ=60)

                                                                                         AGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTG      >  SRR4302541.5147656/1‑94 (MQ=60)

                                                                                         AGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTG      >  SRR4302541.7262810/1‑94 (MQ=60)

                                                                                         AGATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTG      >  SRR4302541.6924292/1‑94 (MQ=60)

                                                                                          GATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGT     <  SRR4302541.8789843/94‑1 (MQ=60)

                                                                                           ATGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTA    >  SRR4302541.6318243/1‑94 (MQ=60)

                                                                                            TGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAA   <  SRR4302541.775285/94‑1 (MQ=60)

                                                                                            TGGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAA   >  SRR4302541.234311/1‑94 (MQ=60)

                                                                                             GGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAAT  >  SRR4302541.5898825/1‑94 (MQ=60)

                                                                                             GGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAAT  >  SRR4302541.1385435/1‑94 (MQ=60)

                                                                                             GGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAAT  >  SRR4302541.1224335/1‑94 (MQ=60)

CGCAGGGCAGCAGGTCTGTGAAACAGTATAGAGATTCATCGGCACAAAGGCTTTGCTTTTTGTCATTTATTCAAACCTTCAAGCGATTCAGATAGCGCCAGCTTAATCGGTTCAACAGCGAAGGTCAGCCCCTTTTCGCCGTTGTCCGCGACAACATAACGCAGTGCACCTTCTGTCTCGGTGTAAT  >  NC_000913/4109133‑4109319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`