Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,145,321 |
T→C |
A192A (GCA→GCG) |
yijO ← |
putative ARAC‑type regulatory protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,145,321 | 0 | T | C | 99.2%
| 862.5
/ NA
| 256 | A192A (GCA→GCG) | yijO | putative ARAC‑type regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (141/113); minor base A (2/0); total (143/113) |
| Fisher's exact test for biased strand distribution p-value = 5.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 263 total aligned reads displayed.
GCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGT > NC_000913/4145233‑4145410
|
cgTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAAc < 1:7440381/93‑1 (MQ=255)
gtgtGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACa < 2:3702698/93‑1 (MQ=255)
gtgtGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACa < 1:1550926/93‑1 (MQ=255)
gtgtGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACa > 2:6227525/1‑93 (MQ=255)
gtgtGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACa > 1:5439437/1‑93 (MQ=255)
tgtgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAg > 2:8707004/1‑93 (MQ=255)
tgtgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAg < 1:2031184/93‑1 (MQ=255)
tgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGAt < 2:6680371/93‑1 (MQ=255)
aTTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGCTTc > 1:5477593/1‑93 (MQ=255)
aTTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTc < 2:975125/93‑1 (MQ=255)
ttCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcg > 1:7620176/1‑93 (MQ=255)
ttCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcg > 1:7892988/1‑93 (MQ=255)
tCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcgc > 2:5213261/1‑93 (MQ=255)
tCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcgc < 2:4193824/93‑1 (MQ=255)
cAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcgcg > 1:2132960/1‑93 (MQ=255)
aGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCgg > 1:8186957/1‑93 (MQ=255)
ggTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCggg < 2:4586817/93‑1 (MQ=255)
gTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGt > 2:831712/1‑93 (MQ=255)
gTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGt < 2:4606477/93‑1 (MQ=255)
tATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTa > 1:6022588/1‑93 (MQ=255)
tATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTa > 1:1558230/1‑93 (MQ=255)
ttCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAg > 2:3944861/1‑93 (MQ=255)
ttCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAg > 2:3124600/1‑93 (MQ=255)
ttCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAg < 1:3232468/93‑1 (MQ=255)
ttCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAg < 1:2935513/93‑1 (MQ=255)
ttCGTTAAAACCAATGGCCCACGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAg > 1:1834735/1‑93 (MQ=255)
cGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAgcg > 2:1675634/1‑93 (MQ=255)
aaaaCCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGa > 1:3532646/1‑93 (MQ=255)
aaaCCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAg < 2:5284934/93‑1 (MQ=255)
aaaCCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAg < 2:7377695/93‑1 (MQ=255)
aCCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGc < 1:1304543/93‑1 (MQ=255)
ccAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCa < 2:7723548/93‑1 (MQ=255)
cAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCAt > 2:2476172/1‑93 (MQ=255)
aaTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATa > 2:886121/1‑93 (MQ=255)
aaTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATa < 1:7284722/93‑1 (MQ=255)
aTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAg > 1:6611190/1‑93 (MQ=255)
aTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAg < 1:6359401/93‑1 (MQ=255)
aTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAg < 1:6969094/93‑1 (MQ=255)
ggCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCg > 1:2650620/1‑93 (MQ=255)
gCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGt < 1:2961949/93‑1 (MQ=255)
cccccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGtt > 2:6615053/1‑93 (MQ=255)
ccccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtc > 1:4696842/1‑93 (MQ=255)
ccccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtc > 1:2798034/1‑93 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt < 1:2699986/93‑1 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt < 2:198465/93‑1 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt < 2:4977853/93‑1 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGGAAGCGCGGAGGCATAGCGTtcgt > 2:4681934/1‑93 (MQ=255)
cGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgtc < 1:8367364/93‑1 (MQ=255)
gTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgtcg > 1:6765031/1‑93 (MQ=255)
ttttttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGa > 1:7100107/1‑93 (MQ=255)
ttttttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGa < 2:5760755/93‑1 (MQ=255)
ttttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGata > 2:6000525/1‑93 (MQ=255)
tttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGatat < 1:262383/93‑1 (MQ=255)
tttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGatat > 2:4827813/1‑93 (MQ=255)
gAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAAt < 2:6510889/93‑1 (MQ=255)
gAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAAt < 1:350252/93‑1 (MQ=255)
aaaCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATc > 1:8716001/1‑93 (MQ=255)
aCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATcgc > 2:2230362/1‑93 (MQ=255)
aGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGa > 1:7381852/1‑93 (MQ=255)
gTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAAt < 1:4035305/93‑1 (MQ=255)
tGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATa < 1:3743516/93‑1 (MQ=255)
cGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGCTCGTCGATATAATCGCGAATAGc > 2:8457095/1‑93 (MQ=255)
cGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGATCGTCGATATAATCGCGAATAGc > 2:6271016/1‑93 (MQ=255)
gagaGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATCGCt > 2:4460886/1‑93 (MQ=255)
gagaGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCt > 1:1084977/1‑93 (MQ=255)
gagaGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCt < 2:8554796/93‑1 (MQ=255)
agagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCTTTCGTCGATATAATCGCGAATAGCtt < 1:2765167/93‑1 (MQ=255)
gagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTc > 2:8622023/1‑93 (MQ=255)
gagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTc > 2:3248041/1‑93 (MQ=255)
gagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTc > 2:5929018/1‑93 (MQ=255)
agGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCa < 2:4415085/93‑1 (MQ=255)
ggTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaa > 2:8256344/1‑93 (MQ=255)
ggTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaa > 2:7611003/1‑93 (MQ=255)
ggTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaa > 2:7089512/1‑93 (MQ=255)
tAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAAt > 1:4116197/1‑93 (MQ=255)
aaTTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATa > 2:2771255/1‑93 (MQ=255)
aTTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAg > 2:5121138/1‑93 (MQ=255)
aTTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAg < 2:6884598/93‑1 (MQ=255)
tttGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGt < 1:4237059/93‑1 (MQ=255)
ttGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTg < 1:8601195/93‑1 (MQ=255)
tGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGc > 1:4448301/1‑93 (MQ=255)
ggCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGcc > 2:2691631/1‑93 (MQ=255)
ggCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGcc > 2:6397214/1‑93 (MQ=255)
gCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCt < 2:5525741/93‑1 (MQ=255)
gCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCt < 2:2982108/93‑1 (MQ=255)
cGAAATCTAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCCCGAATAGCTTCAAAAAGGGCCTg > 2:5717347/1‑93 (MQ=255)
cGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTg < 1:4863220/93‑1 (MQ=255)
cGAAATAAAAAACGCCTGAGCAACAGATTCGCGGGGAAGCGCGGAGGCATGGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTg > 2:6091615/1‑93 (MQ=255)
gAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTgg > 2:7069659/1‑93 (MQ=255)
gAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTgg < 1:5163355/93‑1 (MQ=255)
gAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTgg > 2:3375596/1‑93 (MQ=255)
aaaTATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGc < 2:1514541/93‑1 (MQ=255)
aaaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGa > 1:4171476/1‑93 (MQ=255)
aaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAg > 2:5340733/1‑93 (MQ=255)
aaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAg > 1:7039320/1‑93 (MQ=255)
aaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAg < 1:7667965/93‑1 (MQ=255)
aCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAgg > 2:5428570/1‑93 (MQ=255)
aCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAgg > 1:192395/1‑93 (MQ=255)
cGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGc < 1:5808024/93‑1 (MQ=255)
cGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGc > 2:1069449/1‑93 (MQ=255)
|
GCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGT > NC_000913/4145233‑4145410
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > NC_000913/4145228‑4145414
|
cagttgttTGTGATTCAGGTATTCGTTAAAACCAATGGCCGCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGC < SRR4302541.5882602/86‑1 (MQ=60)
AGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCG > SRR4302541.3972275/1‑94 (MQ=60)
GCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAAC < SRR4302541.6866838/94‑1 (MQ=60)
GCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAAC > SRR4302541.7274485/1‑94 (MQ=60)
CGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACA > SRR4302541.5495507/1‑94 (MQ=60)
CGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACA > SRR4302541.5495252/1‑94 (MQ=60)
CGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACA < SRR4302541.7519890/94‑1 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAG < SRR4302541.1566478/94‑1 (MQ=60)
TGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGA < SRR4302541.2050802/94‑1 (MQ=60)
TGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATT < SRR4302541.312910/94‑1 (MQ=60)
GGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATT < SRR4302541.7675179/94‑1 (MQ=60)
GCTTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTC < SRR4302541.2095282/94‑1 (MQ=60)
GATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGCTTC > SRR4302541.5533760/1‑94 (MQ=60)
ATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCG > SRR4302541.7979770/1‑94 (MQ=60)
ATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCG > SRR4302541.7701545/1‑94 (MQ=60)
TTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGC > SRR4302541.7478914/1‑94 (MQ=60)
TCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCG > SRR4302541.2153585/1‑94 (MQ=60)
TCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCG > SRR4302541.3496996/1‑94 (MQ=60)
CAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGG > SRR4302541.8276326/1‑94 (MQ=60)
gggattcgttagatccaatgggcgcggttgTTTGAAACAGGTGCGAGAGGTAATTGGGCGAAATATAAAACGCCTGCGCAACAGTTTCGCGGGT < SRR4302541.1315834/64‑1 (MQ=60)
GGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGT < SRR4302541.219750/94‑1 (MQ=60)
GTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTA > SRR4302541.1573841/1‑94 (MQ=60)
GTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTA > SRR4302541.6084308/1‑94 (MQ=60)
ATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAG > SRR4302541.1885755/1‑94 (MQ=60)
ATTCGTTAAAACCAATGGCCCACGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAG > SRR4302541.1852522/1‑94 (MQ=60)
TTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGC < SRR4302541.3265108/94‑1 (MQ=60)
TTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGC < SRR4302541.6140574/94‑1 (MQ=60)
TTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGC < SRR4302541.2965033/94‑1 (MQ=60)
GTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCG > SRR4302541.7442317/1‑94 (MQ=60)
TAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGA > SRR4302541.3568246/1‑94 (MQ=60)
AAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAG < SRR4302541.7491628/94‑1 (MQ=60)
AACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGC < SRR4302541.1959602/94‑1 (MQ=60)
AACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGC > SRR4302541.2962133/1‑94 (MQ=60)
ACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCA < SRR4302541.1317399/94‑1 (MQ=60)
ACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCA > SRR4302541.4111239/1‑94 (MQ=60)
CCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCAT < SRR4302541.8016906/94‑1 (MQ=60)
CCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCAT < SRR4302541.1571047/94‑1 (MQ=60)
CCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCAT > SRR4302541.4047520/1‑94 (MQ=60)
CCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCAT < SRR4302541.2954078/94‑1 (MQ=60)
CAATGGCCCCCGTTTTTTGTAACGGGTGCGAGAGGTAATTTGGCGCAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGGGGCATA < SRR4302541.7918760/94‑1 (MQ=60)
CAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATA < SRR4302541.4482285/94‑1 (MQ=60)
CAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATA > SRR4302541.1884739/1‑94 (MQ=60)
CAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATA > SRR4302541.8718514/1‑94 (MQ=60)
AATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAG > SRR4302541.6678936/1‑94 (MQ=60)
AATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAG < SRR4302541.7362463/94‑1 (MQ=60)
AATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAG > SRR4302541.4205998/1‑94 (MQ=60)
AATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAG < SRR4302541.8013802/94‑1 (MQ=60)
ATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGC < SRR4302541.7043367/94‑1 (MQ=60)
ATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGC < SRR4302541.6424427/94‑1 (MQ=60)
TGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCG > SRR4302541.2677003/1‑94 (MQ=60)
GCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTT < SRR4302541.358317/94‑1 (MQ=60)
GCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTT > SRR4302541.4920889/1‑94 (MQ=60)
GCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTT < SRR4302541.2991753/94‑1 (MQ=60)
CCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTC > SRR4302541.2579339/1‑94 (MQ=60)
CCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTC > SRR4302541.2826314/1‑94 (MQ=60)
CCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTC > SRR4302541.8519750/1‑94 (MQ=60)
CCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTC > SRR4302541.4744710/1‑94 (MQ=60)
CCCCCGTTTTTTGAAACAGGTGCGAGAGGGAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTC > SRR4302541.2970554/1‑94 (MQ=60)
CCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCG < SRR4302541.6128932/94‑1 (MQ=60)
CCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCG > SRR4302541.2668130/1‑94 (MQ=60)
CCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTC < SRR4302541.2726801/94‑1 (MQ=60)
CGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCG > SRR4302541.6837374/1‑94 (MQ=60)
CGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCG < SRR4302541.8458082/94‑1 (MQ=60)
CGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCG > SRR4302541.1439189/1‑94 (MQ=60)
GTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAGACGCCTGCGCAACAGATTCGCGGGTAAGCTCGGAGGCATAGGGTTCGTCGA > SRR4302541.7817228/1‑94 (MQ=60)
GTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGA > SRR4302541.7175667/1‑94 (MQ=60)
GTTGTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGA < SRR4302541.7708827/94‑1 (MQ=60)
TTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATAT < SRR4302541.7156429/94‑1 (MQ=60)
TTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATA < SRR4302541.264522/94‑1 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC < SRR4302541.5985529/94‑1 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC > SRR4302541.8809225/1‑94 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC < SRR4302541.2714246/94‑1 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC < SRR4302541.353402/94‑1 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG > SRR4302541.5714490/1‑94 (MQ=60)
CAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGA > SRR4302541.7460760/1‑94 (MQ=60)
AGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAA < SRR4302541.8471472/94‑1 (MQ=60)
AGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAA < SRR4302541.8300722/94‑1 (MQ=60)
AGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAA > SRR4302541.7538792/1‑94 (MQ=60)
GTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATA < SRR4302541.493659/94‑1 (MQ=60)
GTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATA < SRR4302541.4075158/94‑1 (MQ=60)
TGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAG < SRR4302541.3781194/94‑1 (MQ=60)
CGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCT > SRR4302541.8882352/1‑94 (MQ=60)
CGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCT > SRR4302541.1095111/1‑94 (MQ=60)
CGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCT < SRR4302541.2802103/94‑1 (MQ=60)
CGAGAGGGAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCT < SRR4302541.2802102/94‑1 (MQ=60)
AGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCTTTCGTCGATATAATCGCGAATAGCTTC < SRR4302541.2792996/94‑1 (MQ=60)
AGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAA > SRR4302541.2685776/1‑94 (MQ=60)
GTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAACT > SRR4302541.4156851/1‑94 (MQ=60)
GTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAAT > SRR4302541.4156852/1‑94 (MQ=60)
TAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATA < SRR4302541.4168049/94‑1 (MQ=60)
AATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAG > SRR4302541.5475266/1‑94 (MQ=60)
ATTTGGCGAAATATAAAACGCCTGCGCAACATATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGT > SRR4302541.7055361/1‑94 (MQ=60)
TTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTG < SRR4302541.4279305/94‑1 (MQ=60)
TTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGC < SRR4302541.8693466/94‑1 (MQ=60)
TTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGC < SRR4302541.6663281/94‑1 (MQ=60)
TTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGC > SRR4302541.4493043/1‑94 (MQ=60)
TGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCC < SRR4302541.1804314/94‑1 (MQ=60)
TGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCC < SRR4302541.3155159/94‑1 (MQ=60)
GGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAACTAGTGCCT > SRR4302541.1825144/1‑94 (MQ=60)
GCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTG < SRR4302541.5757864/94‑1 (MQ=60)
GCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTG > SRR4302541.5232758/1‑94 (MQ=60)
CGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG < SRR4302541.4912825/94‑1 (MQ=60)
CGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG < SRR4302541.33381/94‑1 (MQ=60)
CGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG < SRR4302541.4520443/94‑1 (MQ=60)
CGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG > SRR4302541.6701932/1‑94 (MQ=60)
GAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGC < SRR4302541.5216480/94‑1 (MQ=60)
AAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCT > SRR4302541.2770931/1‑94 (MQ=60)
ATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGC > SRR4302541.4333505/1‑94 (MQ=60)
ATATAAAACGCCGGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGC < SRR4302541.6855451/94‑1 (MQ=60)
TATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCG < SRR4302541.1099135/94‑1 (MQ=60)
AAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGA < SRR4302541.3774599/94‑1 (MQ=60)
AAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGA > SRR4302541.4212831/1‑94 (MQ=60)
AAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAG < SRR4302541.2153164/94‑1 (MQ=60)
AAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAG > SRR4302541.7114154/1‑94 (MQ=60)
AACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGG > SRR4302541.4251993/1‑94 (MQ=60)
AACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGG > SRR4302541.193854/1‑94 (MQ=60)
AACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGG < SRR4302541.7749528/94‑1 (MQ=60)
AACGCCTGCGCAACAGATGCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGG < SRR4302541.3556534/94‑1 (MQ=60)
ACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGC < SRR4302541.4883845/94‑1 (MQ=60)
ACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATAT‑ATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCG < SRR4302541.4743189/94‑1 (MQ=60)
CGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCG < SRR4302541.7266346/94‑1 (MQ=60)
CGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCG < SRR4302541.5867038/94‑1 (MQ=60)
GCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGG > SRR4302541.7046977/1‑94 (MQ=60)
CCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGT > SRR4302541.6461578/1‑94 (MQ=60)
CCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGT > SRR4302541.1392771/1‑94 (MQ=60)
CCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGT > SRR4302541.8856470/1‑94 (MQ=60)
TGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCT < SRR4302541.8805090/94‑1 (MQ=60)
GCGCAACAGATTCGCGGGTAAGCGCGGATGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTG < SRR4302541.3034459/94‑1 (MQ=60)
GCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTG < SRR4302541.5117248/94‑1 (MQ=60)
GCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTG > SRR4302541.6644384/1‑94 (MQ=60)
GCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTG < SRR4302541.7297994/94‑1 (MQ=60)
GCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTG < SRR4302541.6204393/94‑1 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > SRR4302541.3387387/1‑94 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > SRR4302541.5200748/1‑94 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATAGAATCGCGAATAGCTTCAAATAGTGCCCGGCTGCGTGAGGCGGTCTGG > SRR4302541.5200749/1‑94 (MQ=60)
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CAGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > NC_000913/4145228‑4145414
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
