Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,145,321 |
T→C |
A192A (GCA→GCG) |
yijO ← |
putative ARAC‑type regulatory protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,145,321 | 0 | T | C | 100.0%
| 627.7
/ NA
| 182 | A192A (GCA→GCG) | yijO | putative ARAC‑type regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/84); total (98/84) |
Only 100 of 187 total aligned reads displayed.
CGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGT > NC_000913/4145232‑4145410
|
gcgTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCaa > 2:5516615/1‑93 (MQ=255)
gcgTGAGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCaa > 1:2443656/1‑93 (MQ=255)
gtgtGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACa < 1:2843810/93‑1 (MQ=255)
gtgtGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACa < 1:1711675/93‑1 (MQ=255)
gtgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGa < 2:6404978/93‑1 (MQ=255)
tgATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGAt < 2:3930952/93‑1 (MQ=255)
aTTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTc < 2:1696434/93‑1 (MQ=255)
ttCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTcg > 1:3771264/1‑93 (MQ=255)
aGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCgg > 1:1394517/1‑93 (MQ=255)
aGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCgg > 1:5351738/1‑93 (MQ=255)
aGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCgg > 1:4150041/1‑93 (MQ=255)
ggTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCggg > 2:957462/1‑93 (MQ=255)
ggTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCggg < 1:2536747/93‑1 (MQ=255)
ggTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCggg < 2:4766238/93‑1 (MQ=255)
ggTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCggg > 1:2011730/1‑93 (MQ=255)
ggTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCggg > 1:1713509/1‑93 (MQ=255)
gTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGt > 1:4795807/1‑93 (MQ=255)
tATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTa > 2:6200731/1‑93 (MQ=255)
aTTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTaa > 1:2070390/1‑93 (MQ=255)
aTTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTaa > 1:1346397/1‑93 (MQ=255)
ttCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAg > 2:1777915/1‑93 (MQ=255)
tCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAgc > 2:3410797/1‑93 (MQ=255)
tCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAgc < 1:1553915/93‑1 (MQ=255)
ttAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGcgcg > 1:4231827/1‑93 (MQ=255)
tAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCgg < 1:4359721/93‑1 (MQ=255)
aaaaCCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGTTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGa < 2:2980534/93‑1 (MQ=255)
aaCCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAgg > 1:5065112/1‑93 (MQ=255)
aaCCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAgg < 2:445157/93‑1 (MQ=255)
aaTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATa > 1:2712844/1‑93 (MQ=255)
aaTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATa > 2:3705900/1‑93 (MQ=255)
aTGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAg < 1:6233222/93‑1 (MQ=255)
tGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGc > 2:6433884/1‑93 (MQ=255)
gCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGt < 2:4616837/93‑1 (MQ=255)
cccccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGtt < 2:5633130/93‑1 (MQ=255)
cccccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGtt < 2:1039715/93‑1 (MQ=255)
ccccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtc > 2:3933526/1‑93 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt > 1:4493416/1‑93 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt > 1:2250974/1‑93 (MQ=255)
ccGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgt < 2:3498839/93‑1 (MQ=255)
cGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgtc < 1:2659372/93‑1 (MQ=255)
cGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgtc > 2:4999096/1‑93 (MQ=255)
gTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTtcgtcg > 1:2518522/1‑93 (MQ=255)
ttttttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGa > 2:2072500/1‑93 (MQ=255)
tttttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGat > 2:2690020/1‑93 (MQ=255)
tttttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGat > 2:4270268/1‑93 (MQ=255)
tttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGatat < 2:1155018/93‑1 (MQ=255)
ttGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGAtata < 1:1664857/93‑1 (MQ=255)
gAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAAt > 2:1257513/1‑93 (MQ=255)
gAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAAt > 2:559326/1‑93 (MQ=255)
aaaCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATc > 1:5568571/1‑93 (MQ=255)
aaaCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATc > 1:3840568/1‑93 (MQ=255)
aaCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATcg < 2:2287428/93‑1 (MQ=255)
aCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATcgc > 1:200147/1‑93 (MQ=255)
aCAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATcgc < 1:4413816/93‑1 (MQ=255)
cAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATcgcg < 1:5756482/93‑1 (MQ=255)
gTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTGCGTCGATATAATCGCGAAt < 1:6301625/93‑1 (MQ=255)
tGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATa < 1:5952319/93‑1 (MQ=255)
gagaGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCt > 2:5170557/1‑93 (MQ=255)
gagaGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCt > 1:1121453/1‑93 (MQ=255)
agagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCtt > 2:1980945/1‑93 (MQ=255)
agagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCtt > 2:6395724/1‑93 (MQ=255)
agagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCtt < 2:1845524/93‑1 (MQ=255)
agagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCtt > 1:6248578/1‑93 (MQ=255)
gagGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTc > 2:2748075/1‑93 (MQ=255)
agGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCa > 2:4307968/1‑93 (MQ=255)
agGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCa < 1:2372478/93‑1 (MQ=255)
ggTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaa > 2:1294350/1‑93 (MQ=255)
ggTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaa > 2:3796520/1‑93 (MQ=255)
gTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCaaa > 1:5303614/1‑93 (MQ=255)
tAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAAt < 2:1388687/93‑1 (MQ=255)
aaTTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATa < 1:3563119/93‑1 (MQ=255)
aTTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAg < 2:1462742/93‑1 (MQ=255)
tttGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGt < 1:992408/93‑1 (MQ=255)
ttGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTg > 1:4348721/1‑93 (MQ=255)
ttGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTg < 1:5271019/93‑1 (MQ=255)
ggCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGcc > 2:5551652/1‑93 (MQ=255)
ggCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGcc < 2:671492/93‑1 (MQ=255)
ggCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGcc < 1:1024229/93‑1 (MQ=255)
cGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTg < 1:4671564/93‑1 (MQ=255)
gAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTgg > 2:5720359/1‑93 (MQ=255)
aaaTATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGc < 1:4805707/93‑1 (MQ=255)
aaTATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCt < 2:3574188/93‑1 (MQ=255)
aaTATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCt < 1:3739595/93‑1 (MQ=255)
atatAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTg > 2:2433558/1‑93 (MQ=255)
atatAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTg > 1:3015358/1‑93 (MQ=255)
tataAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGc < 1:5444699/93‑1 (MQ=255)
tataAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGc < 1:2954213/93‑1 (MQ=255)
tataAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGc < 1:3143933/93‑1 (MQ=255)
taAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGt > 2:4712829/1‑93 (MQ=255)
taAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGt > 2:2522978/1‑93 (MQ=255)
aaaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGa > 1:775737/1‑93 (MQ=255)
aaaCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGa < 1:1309796/93‑1 (MQ=255)
aCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAgg > 2:5129231/1‑93 (MQ=255)
aCGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAgg < 2:5727906/93‑1 (MQ=255)
cGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAgtc > 2:3099880/1‑91 (MQ=255)
gCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCg > 1:5669537/1‑93 (MQ=255)
ccTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCgg > 1:3550677/1‑93 (MQ=255)
cTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAggtcgt > 2:263055/1‑89 (MQ=255)
cTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGt > 2:4326964/1‑93 (MQ=255)
cTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGt > 2:3047233/1‑93 (MQ=255)
|
CGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGT > NC_000913/4145232‑4145410
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > NC_000913/4145228‑4145414
|
CAGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGC < SRR4302534.870570/94‑1 (MQ=60)
CAGTCGCGTGTGATTCAGCTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGC < SRR4302534.1710273/94‑1 (MQ=60)
AGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCG > SRR4302534.6364732/1‑94 (MQ=60)
AGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCG > SRR4302534.6364731/1‑94 (MQ=60)
AGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCG > SRR4302534.1576246/1‑94 (MQ=60)
CGCGTGAGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAA > SRR4302534.2508600/1‑94 (MQ=60)
CGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACA > SRR4302534.6030589/1‑94 (MQ=60)
CGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACA > SRR4302534.2905303/1‑94 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCGCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGCAATATAAAACGCCTGCGCAACAG > SRR4302534.2390590/1‑94 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAG < SRR4302534.2918527/94‑1 (MQ=60)
GTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAG < SRR4302534.1756148/94‑1 (MQ=60)
TGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATT < SRR4302534.159818/94‑1 (MQ=60)
GATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTC < SRR4302534.4451774/94‑1 (MQ=60)
ATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCG > SRR4302534.3872533/1‑94 (MQ=60)
TTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGC < SRR4302534.3732637/94‑1 (MQ=60)
CAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGG > SRR4302534.4262066/1‑94 (MQ=60)
CAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGG > SRR4302534.1431211/1‑94 (MQ=60)
CAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGG > SRR4302534.4666247/1‑94 (MQ=60)
CAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGG > SRR4302534.5496033/1‑94 (MQ=60)
AGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGG > SRR4302534.1758022/1‑94 (MQ=60)
AGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGG > SRR4302534.2064360/1‑94 (MQ=60)
AGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGG < SRR4302534.5466914/94‑1 (MQ=60)
GGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGT < SRR4302534.2604059/94‑1 (MQ=60)
GGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGT > SRR4302534.4926027/1‑94 (MQ=60)
TATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAA > SRR4302534.1381889/1‑94 (MQ=60)
TATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAA > SRR4302534.2124544/1‑94 (MQ=60)
TCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCG < SRR4302534.1594612/94‑1 (MQ=60)
TCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCG > SRR4302534.5408704/1‑94 (MQ=60)
GTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCG > SRR4302534.4345893/1‑94 (MQ=60)
TTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGG > SRR4302534.2543613/1‑94 (MQ=60)
TTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGG > SRR4302534.2781908/1‑94 (MQ=60)
TAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGA < SRR4302534.4477333/94‑1 (MQ=60)
AAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGG > SRR4302534.5201866/1‑94 (MQ=60)
AACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGA > SRR4302534.5061207/1‑94 (MQ=60)
ACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCA < SRR4302534.4279390/94‑1 (MQ=60)
CCAATGGCCCCCGTTTTTTGAAACAGGGGCGAGAGCTAATTTGGCGAAATATAAAACGGCTGCGCAACAGAATCGCGGGTAAGCGCGGAGGCAT > SRR4302534.5572906/1‑94 (MQ=60)
CAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATA > SRR4302534.2784468/1‑94 (MQ=60)
AATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAG < SRR4302534.4478763/94‑1 (MQ=60)
ATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGC < SRR4302534.6402406/94‑1 (MQ=60)
CCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCG < SRR4302534.2062416/94‑1 (MQ=60)
CCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGT > SRR4302534.4615011/1‑94 (MQ=60)
CCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGT > SRR4302534.2310647/1‑94 (MQ=60)
CGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCG < SRR4302534.2729680/94‑1 (MQ=60)
CGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCG > SRR4302534.2585390/1‑94 (MQ=60)
TATTGAAACAGGTGCGAGAGGTAATTTGCCGAAATATAAAACGCCTGCGCACCAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATAT < SRR4302534.4816184/94‑1 (MQ=60)
TTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATA > SRR4302534.3209896/1‑94 (MQ=60)
TTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATA < SRR4302534.6324596/94‑1 (MQ=60)
TTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAA < SRR4302534.4565102/94‑1 (MQ=60)
TTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAA < SRR4302534.1708192/94‑1 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC > SRR4302534.1376992/1‑94 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC > SRR4302534.3943728/1‑94 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC > SRR4302534.5718951/1‑94 (MQ=60)
GAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATC > SRR4302534.3877622/1‑94 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG > SRR4302534.3012152/1‑94 (MQ=60)
AAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCG < SRR4302534.1322689/94‑1 (MQ=60)
AACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGC < SRR4302534.140623/94‑1 (MQ=60)
AACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGC < SRR4302534.644527/94‑1 (MQ=60)
AACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGC > SRR4302534.4004327/1‑94 (MQ=60)
AACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGC > SRR4302534.205402/1‑94 (MQ=60)
ACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCG < SRR4302534.4532962/94‑1 (MQ=60)
CAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGA < SRR4302534.5912619/94‑1 (MQ=60)
CAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGA < SRR4302534.5879083/94‑1 (MQ=60)
GTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTGCGTCGATATAATCGCGAATA < SRR4302534.6472043/94‑1 (MQ=60)
GTGCGAGAGCTAATGTGGCGAGCTATAAAACGCCTGCGCAACAAATTCGCGGCTACGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATA < SRR4302534.5898566/94‑1 (MQ=60)
TGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAG < SRR4302534.6113940/94‑1 (MQ=60)
CGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCT < SRR4302534.1498871/94‑1 (MQ=60)
CGAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCT > SRR4302534.1150757/1‑94 (MQ=60)
GAGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTT > SRR4302534.6418033/1‑94 (MQ=60)
AGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTC > SRR4302534.70529/1‑94 (MQ=60)
AGAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTC > SRR4302534.2091423/1‑94 (MQ=60)
GAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCA > SRR4302534.3336331/1‑94 (MQ=60)
GAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCA > SRR4302534.4934090/1‑94 (MQ=60)
GAGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCA > SRR4302534.1747056/1‑94 (MQ=60)
AGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAA < SRR4302534.2723222/94‑1 (MQ=60)
AGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAA < SRR4302534.2435477/94‑1 (MQ=60)
AGGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAA > SRR4302534.5507104/1‑94 (MQ=60)
GGTAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAA > SRR4302534.5446713/1‑94 (MQ=60)
TAATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGACATAATCGCGAATAGCTTCAAATA < SRR4302534.2171293/94‑1 (MQ=60)
AATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAG < SRR4302534.3867633/94‑1 (MQ=60)
AATTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAG < SRR4302534.3658977/94‑1 (MQ=60)
TTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTG > SRR4302534.4466134/1‑94 (MQ=60)
TTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTG < SRR4302534.1017808/94‑1 (MQ=60)
TTTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTG < SRR4302534.2462811/94‑1 (MQ=60)
TTGGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGC < SRR4302534.5413397/94‑1 (MQ=60)
GGCGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCT < SRR4302534.1050606/94‑1 (MQ=60)
CGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG > SRR4302534.3064151/1‑94 (MQ=60)
CGAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGG < SRR4302534.4798370/94‑1 (MQ=60)
GAAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGC < SRR4302534.1922487/94‑1 (MQ=60)
AAATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCT < SRR4302534.4936182/94‑1 (MQ=60)
AATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTG < SRR4302534.3840071/94‑1 (MQ=60)
AATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTG > SRR4302534.5662062/1‑94 (MQ=60)
AATATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTG > SRR4302534.3094293/1‑94 (MQ=60)
TATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCG < SRR4302534.5591390/94‑1 (MQ=60)
TATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCG < SRR4302534.3226616/94‑1 (MQ=60)
TATAAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCG < SRR4302534.3031663/94‑1 (MQ=60)
AAAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGA > SRR4302534.795065/1‑94 (MQ=60)
AAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAG < SRR4302534.1344336/94‑1 (MQ=60)
AAACGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAG > SRR4302534.835062/1‑94 (MQ=60)
CGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCG > SRR4302534.5823037/1‑94 (MQ=60)
CGCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCG < SRR4302534.5777376/94‑1 (MQ=60)
GCCTGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGG > SRR4302534.3646153/1‑94 (MQ=60)
CCTGCACAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGT < SRR4302534.3689309/94‑1 (MQ=60)
TGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCT < SRR4302534.2622925/94‑1 (MQ=60)
TGCGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCT < SRR4302534.4313954/94‑1 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > SRR4302534.2725030/1‑94 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > SRR4302534.3233483/1‑94 (MQ=60)
CGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > SRR4302534.2371186/1‑94 (MQ=60)
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CAGTCGCGTGTGATTCAGGTATTCGTTAAAACCAATGGCCCCCGTTTTTTGAAACAGGTGCGAGAGGTAATTTGGCGAAATATAAAACGCCTGTGCAACAGATTCGCGGGTAAGCGCGGAGGCATAGCGTTCGTCGATATAATCGCGAATAGCTTCAAATAGTGCCTGGCTGCGTGAGGCGGTCTGG > NC_000913/4145228‑4145414
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
