Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,162,448 |
A→G |
T411A (ACA→GCA) |
btuB → |
BtuB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,162,448 | 0 | A | G | 99.6%
| 846.4
/ ‑5.0
| 246 | T411A (ACA→GCA) | btuB | BtuB |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (127/118); total (128/118) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 |
Only 100 of 257 total aligned reads displayed.
GATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGC > NC_000913/4162358‑4162537
|
gATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCa > 1:2218636/1‑93 (MQ=255)
gATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCa > 1:4660436/1‑93 (MQ=255)
aaCTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCt < 2:8101611/93‑1 (MQ=255)
cTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTta > 1:1771414/1‑93 (MQ=255)
cTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTta < 1:1039546/93‑1 (MQ=255)
cTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTta > 2:375168/1‑93 (MQ=255)
tCACAGTTTGGTCGTCATGGAACATGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGCGCATCTtat > 2:4134433/1‑93 (MQ=255)
cacaGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCCTCTtata > 1:4204791/1‑93 (MQ=255)
cacaGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTtata > 1:4139242/1‑93 (MQ=255)
acaGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATaa > 1:2037191/1‑93 (MQ=255)
acaGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATaa > 2:8552990/1‑93 (MQ=255)
aGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAgg > 2:4412501/1‑93 (MQ=255)
aGTTTGGTCCTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAgg < 2:1873844/93‑1 (MQ=255)
gTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGc > 1:5416644/1‑93 (MQ=255)
ttGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCAc > 1:3337523/1‑93 (MQ=255)
ttGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCAc > 1:7571331/1‑93 (MQ=255)
tgtcgtcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCa < 2:5697002/92‑1 (MQ=255)
tcgtcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCagt < 2:7694255/93‑3 (MQ=255)
tcgtcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCaaa > 2:8343589/1‑93 (MQ=255)
gtcATTGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATc < 1:6689487/93‑1 (MQ=255)
gtcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATc > 2:4929840/1‑93 (MQ=255)
tcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCt < 2:2122057/93‑1 (MQ=255)
cATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTg > 1:324949/1‑93 (MQ=255)
tGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTggg < 1:360308/93‑1 (MQ=255)
ggAACCTGGCAAACCAGCGCCGGTTTTGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTgggg < 2:8806887/93‑1 (MQ=255)
ggAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTgggg < 1:7788472/93‑1 (MQ=255)
aaCCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCa > 1:6409849/1‑93 (MQ=255)
aCCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCaa > 1:6568050/1‑93 (MQ=255)
aCCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCaa < 1:5122076/93‑1 (MQ=255)
ccTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAAc < 2:3457330/93‑1 (MQ=255)
cTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACt > 1:5930162/1‑93 (MQ=255)
tGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTg < 1:791676/93‑1 (MQ=255)
ggCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGt < 2:7189315/93‑1 (MQ=255)
gCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTa < 1:6731964/93‑1 (MQ=255)
gCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTa < 2:3088624/93‑1 (MQ=255)
aaaCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATg > 1:240484/1‑93 (MQ=255)
aaaCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATg > 2:6206788/1‑93 (MQ=255)
aaaCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATg < 2:5164313/93‑1 (MQ=255)
aaaCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATg > 2:8259495/1‑93 (MQ=255)
aaaCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATg > 2:5840693/1‑93 (MQ=255)
aCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGc < 2:2515366/93‑1 (MQ=255)
aCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGc > 2:3884221/1‑93 (MQ=255)
ccAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCt > 2:8523958/1‑93 (MQ=255)
ccAGCGCCGGTTGGGAATTCATCGAAGGTCATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCt < 2:1618020/93‑1 (MQ=255)
aGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTc < 1:7507672/93‑1 (MQ=255)
aGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGAAACTGTATGGCttt > 1:6258059/1‑92 (MQ=255)
gcgcCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCt < 1:7079271/93‑1 (MQ=255)
gggAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATc < 2:488340/93‑1 (MQ=255)
gggAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATc < 1:5591591/93‑1 (MQ=255)
gggAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATc > 1:5274709/1‑93 (MQ=255)
aaTTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGa > 1:3953440/1‑93 (MQ=255)
aTTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGaa < 1:8426542/93‑1 (MQ=255)
aTTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGaa < 1:1663236/93‑1 (MQ=255)
ttCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAAt > 2:2378874/1‑93 (MQ=255)
ttCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAAt < 2:1249609/93‑1 (MQ=255)
ttCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAAt < 1:4874420/93‑1 (MQ=255)
tCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATc < 2:3947348/93‑1 (MQ=255)
tCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATc < 1:8283141/93‑1 (MQ=255)
tCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATc < 2:3711011/93‑1 (MQ=255)
tCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATc > 1:4750185/1‑93 (MQ=255)
cATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCt > 2:1147189/1‑93 (MQ=255)
cATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCt < 1:8351059/93‑1 (MQ=255)
aTCGAAGGTTATCGCTTCATTGCTTTCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTAAGGAAATCACAATCTg > 2:2043013/1‑93 (MQ=255)
aTCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTg > 2:465796/1‑93 (MQ=255)
aTCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTg > 2:5305181/1‑93 (MQ=255)
aTCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTg > 1:7813855/1‑93 (MQ=255)
tCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTgg > 2:1641874/1‑93 (MQ=255)
acGAAGGGTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTgg < 1:2913014/92‑1 (MQ=255)
cGAAGGTTATCGCTTCATTGCTTCCTACGGGGGATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGa > 1:8138494/1‑93 (MQ=255)
cGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGa < 1:8117899/93‑1 (MQ=255)
gAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAAGCCGAATCTGGAc > 2:7039700/1‑93 (MQ=255)
aGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAccc < 1:4452751/93‑1 (MQ=255)
gTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCgg < 2:7018420/93‑1 (MQ=255)
gTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCgg > 1:8120604/1‑93 (MQ=255)
ttATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGga > 2:5472308/1‑93 (MQ=255)
tATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGgag > 1:7339893/1‑93 (MQ=255)
aTCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGgaga < 1:5452329/93‑1 (MQ=255)
aTCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGgaga > 2:8199950/1‑93 (MQ=255)
cGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGaaa < 1:5079355/93‑1 (MQ=255)
gCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGaaaa > 1:8574676/1‑93 (MQ=255)
cTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAg < 2:7983802/93‑1 (MQ=255)
cTTCATTGCTTCCTACGGAGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAg < 1:1454040/93‑1 (MQ=255)
tCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCa > 1:3853437/1‑93 (MQ=255)
tCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCa > 2:7809890/1‑93 (MQ=255)
aTTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCaaa < 2:6111092/93‑1 (MQ=255)
aTTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCaaa > 1:6879139/1‑93 (MQ=255)
ttGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAc < 1:957255/93‑1 (MQ=255)
ttGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAc > 1:2719244/1‑93 (MQ=255)
ttGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACACGGAGAACAGAAAAc > 2:2507210/1‑93 (MQ=255)
gCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAg < 2:5764211/93‑1 (MQ=255)
cTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGt < 1:7800874/93‑1 (MQ=255)
ttCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTg > 2:4856003/1‑93 (MQ=255)
tCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTgg < 2:3162400/93‑1 (MQ=255)
tCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTgg > 2:5988805/1‑93 (MQ=255)
ccTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTggg < 2:1891722/93‑1 (MQ=255)
tACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGaa < 2:3318720/93‑1 (MQ=255)
aCGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGaat > 2:364065/1‑92 (MQ=255)
aCGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAg < 2:461559/93‑1 (MQ=255)
cGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAgg > 2:678241/1‑93 (MQ=255)
ggggCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGgc < 2:6658363/93‑1 (MQ=255)
|
GATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGC > NC_000913/4162358‑4162537
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGC > NC_000913/4162355‑4162539
|
GACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGG < SRR4302541.989625/94‑1 (MQ=60)
GACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGG > SRR4302541.2717061/1‑94 (MQ=60)
ACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGC < SRR4302541.1966177/94‑1 (MQ=60)
ACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGC > SRR4302541.266391/1‑94 (MQ=60)
agatagctaACAGTTTGGTCGTAGTTGAACCTGGGAAACCAGCGACGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCA < SRR4302541.2773423/85‑1 (MQ=60)
CGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCA > SRR4302541.4707891/1‑94 (MQ=60)
CGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCA > SRR4302541.2240149/1‑94 (MQ=60)
CGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCA < SRR4302541.330174/94‑1 (MQ=60)
AACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTT > SRR4302541.4788763/1‑94 (MQ=60)
ACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTA > SRR4302541.1788630/1‑94 (MQ=60)
CTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTAT < SRR4302541.1049179/94‑1 (MQ=60)
TCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGGGCCGGTTGGGAATTCCTCGAAGGCTATCGCTTCATTGGTTGCTACGGGGCATCTTATA > SRR4302541.4246597/1‑94 (MQ=60)
TCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGCATTCATCGAAGGCTATCGCTTCATTGCTTCCTACGGGGCATCTTATA > SRR4302541.5602858/1‑94 (MQ=60)
TCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCCTCTTATA > SRR4302541.4246596/1‑94 (MQ=60)
TCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATA < SRR4302541.5338311/94‑1 (MQ=60)
TCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATA > SRR4302541.4180142/1‑94 (MQ=60)
TCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATA < SRR4302541.2487935/94‑1 (MQ=60)
CACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAA > SRR4302541.2056865/1‑94 (MQ=60)
CAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCGTCTTATAAGG > SRR4302541.5848634/1‑94 (MQ=60)
AGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGC > SRR4302541.5472206/1‑94 (MQ=60)
GTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCA > SRR4302541.4204330/1‑94 (MQ=60)
GTTTGGTCGTCATGGAACCTGGCAAACAAGCGCCGGTTGGGAATTCATCGAAGGTTATCGTTTCATTGCTTCCTACGGGGCATCTTATAAGGCA > SRR4302541.4204331/1‑94 (MQ=60)
TTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCAC > SRR4302541.8501282/1‑94 (MQ=60)
TTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCAC < SRR4302541.8204443/94‑1 (MQ=60)
TTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCAC > SRR4302541.7652239/1‑94 (MQ=60)
TTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCAC > SRR4302541.3370919/1‑94 (MQ=60)
TGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCA < SRR4302541.7837674/94‑1 (MQ=60)
GGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAA > SRR4302541.3907457/1‑94 (MQ=60)
TCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAAT > SRR4302541.4837251/1‑94 (MQ=60)
TCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAAT < SRR4302541.6707533/94‑1 (MQ=60)
GTCATTGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCT < SRR4302541.6758961/94‑1 (MQ=60)
TCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTG > SRR4302541.327850/1‑94 (MQ=60)
TCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTG < SRR4302541.8222737/94‑1 (MQ=60)
CATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGG > SRR4302541.160207/1‑94 (MQ=60)
ATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGG < SRR4302541.8354203/94‑1 (MQ=60)
TGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGG > SRR4302541.1760084/1‑94 (MQ=60)
TGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGG < SRR4302541.363569/94‑1 (MQ=60)
TGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGG > SRR4302541.2061953/1‑94 (MQ=60)
TGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGG < SRR4302541.6294595/94‑1 (MQ=60)
GGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGC < SRR4302541.7871743/94‑1 (MQ=60)
GAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCA > SRR4302541.6475227/1‑94 (MQ=60)
AACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAA > SRR4302541.6635243/1‑94 (MQ=60)
ACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAAC < SRR4302541.7102226/94‑1 (MQ=60)
ACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAAC < SRR4302541.5174713/94‑1 (MQ=60)
CCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACT > SRR4302541.5990564/1‑94 (MQ=60)
CTGGCGAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTG < SRR4302541.4111729/94‑1 (MQ=60)
CGGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTG > SRR4302541.7885758/1‑94 (MQ=60)
TGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGT > SRR4302541.6184875/1‑94 (MQ=60)
TGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGT < SRR4302541.798996/94‑1 (MQ=60)
TGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGT < SRR4302541.6871215/94‑1 (MQ=60)
GCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTAT < SRR4302541.3402885/94‑1 (MQ=60)
GCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTAT < SRR4302541.6803815/94‑1 (MQ=60)
CAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATG > SRR4302541.242398/1‑94 (MQ=60)
CAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATG > SRR4302541.2008076/1‑94 (MQ=60)
CAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATG < SRR4302541.7628116/94‑1 (MQ=60)
CAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATG > SRR4302541.8196744/1‑94 (MQ=60)
AAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGG > SRR4302541.6821749/1‑94 (MQ=60)
AAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGG > SRR4302541.4283439/1‑94 (MQ=60)
AAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGG > SRR4302541.7624725/1‑94 (MQ=60)
AAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGG > SRR4302541.7886249/1‑94 (MQ=60)
AAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGG > SRR4302541.3135361/1‑94 (MQ=60)
AACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGC < SRR4302541.6648864/94‑1 (MQ=60)
CAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGAAACTGTATGGCTTT > SRR4302541.6321982/1‑94 (MQ=60)
AGCGCCGGTTGGGAATTCATTGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCT > SRR4302541.8628606/1‑94 (MQ=60)
AGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCT > SRR4302541.5337200/1‑94 (MQ=60)
AGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCT < SRR4302541.722124/94‑1 (MQ=60)
AGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCT < SRR4302541.7587918/94‑1 (MQ=60)
GCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTA < SRR4302541.7154570/94‑1 (MQ=60)
CGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTAC > SRR4302541.795914/1‑94 (MQ=60)
GCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACG > SRR4302541.8746988/1‑94 (MQ=60)
GCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACG < SRR4302541.4767448/94‑1 (MQ=60)
CGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGA < SRR4302541.376985/94‑1 (MQ=60)
TGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATC > SRR4302541.5329037/1‑94 (MQ=60)
GGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGTCACTGTATGGCTTCTACGGAAATCC > SRR4302541.8271392/1‑94 (MQ=60)
GGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCC < SRR4302541.5648831/94‑1 (MQ=60)
GAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGA < SRR4302541.3982641/94‑1 (MQ=60)
GAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGA > SRR4302541.3992741/1‑94 (MQ=60)
AATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAA > SRR4302541.497691/1‑94 (MQ=60)
ATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAAT > SRR4302541.305465/1‑94 (MQ=60)
ATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAAT < SRR4302541.1679646/94‑1 (MQ=60)
ATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAAT < SRR4302541.8517613/94‑1 (MQ=60)
TTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATC < SRR4302541.4924151/94‑1 (MQ=60)
TTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATC > SRR4302541.4798716/1‑94 (MQ=60)
TCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCT < SRR4302541.8373240/94‑1 (MQ=60)
CATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTG > SRR4302541.7898388/1‑94 (MQ=60)
CATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTG < SRR4302541.8441688/94‑1 (MQ=60)
ATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGG > SRR4302541.1926101/1‑94 (MQ=60)
TCGAAGGTTATCGCTTCATTGCTTCCTACGGGGGATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGA > SRR4302541.8227550/1‑94 (MQ=60)
ACGAAGGGTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGA < SRR4302541.2942307/94‑1 (MQ=60)
CGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAC < SRR4302541.8206816/94‑1 (MQ=60)
CGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAC < SRR4302541.8206817/94‑1 (MQ=60)
CGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAC > SRR4302541.8213278/1‑94 (MQ=60)
GAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACC < SRR4302541.7257847/94‑1 (MQ=60)
AAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCC > SRR4302541.2405929/1‑94 (MQ=60)
AGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTTCGGAATTCCGAATCTGGACCCG > SRR4302541.7881666/1‑94 (MQ=60)
AGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCG < SRR4302541.5472727/94‑1 (MQ=60)
AGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCG < SRR4302541.2841040/94‑1 (MQ=60)
AGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCG < SRR4302541.4497551/94‑1 (MQ=60)
GGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGG > SRR4302541.776248/1‑94 (MQ=60)
GGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGG > SRR4302541.8209539/1‑94 (MQ=60)
GTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGA < SRR4302541.6345825/94‑1 (MQ=60)
TTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAG > SRR4302541.7418279/1‑94 (MQ=60)
TTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAG > SRR4302541.5637624/1‑94 (MQ=60)
TTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAG > SRR4302541.150483/1‑94 (MQ=60)
TTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAG > SRR4302541.7418280/1‑94 (MQ=60)
ATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAA < SRR4302541.5508270/94‑1 (MQ=60)
CGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAA < SRR4302541.5131546/94‑1 (MQ=60)
CGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAA > SRR4302541.8666752/1‑94 (MQ=60)
GCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAG > SRR4302541.6774315/1‑94 (MQ=60)
CTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCGTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGC > SRR4302541.3533117/1‑94 (MQ=60)
CTTCATTGCTTCCTACGGAGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGC < SRR4302541.1468229/94‑1 (MQ=60)
TTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCA > SRR4302541.4555899/1‑94 (MQ=60)
TTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCA > SRR4302541.5176811/1‑94 (MQ=60)
TTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCA > SRR4302541.3892217/1‑94 (MQ=60)
CTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCA < SRR4302541.2328580/94‑1 (MQ=60)
CATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAA > SRR4302541.899522/1‑94 (MQ=60)
CATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAA > SRR4302541.6952592/1‑94 (MQ=60)
CATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAA > SRR4302541.8419392/1‑94 (MQ=60)
ATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAC > SRR4302541.2746381/1‑94 (MQ=60)
TTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACA < SRR4302541.966295/94‑1 (MQ=60)
TTGCTTCCTACGGGACAGCGTATAAGGCACCAAATCTGGAGCAACTTTATGGCTTCGACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACA < SRR4302541.8455613/94‑1 (MQ=60)
TGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAG < SRR4302541.520172/94‑1 (MQ=60)
TGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAG < SRR4302541.5141504/94‑1 (MQ=60)
GTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTG < SRR4302541.6539050/94‑1 (MQ=60)
CTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTG < SRR4302541.7884848/94‑1 (MQ=60)
TTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGG < SRR4302541.2920294/94‑1 (MQ=60)
TTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGG < SRR4302541.127468/94‑1 (MQ=60)
TACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAG < SRR4302541.6553323/94‑1 (MQ=60)
CGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGC < SRR4302541.3304852/94‑1 (MQ=60)
GGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCG < SRR4302541.5063506/94‑1 (MQ=60)
GGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGC > SRR4302541.3267724/1‑94 (MQ=60)
|
GACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGC > NC_000913/4162355‑4162539
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
