Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,162,448 |
A→G |
T411A (ACA→GCA) |
btuB → |
BtuB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,162,448 | 0 | A | G | 99.5%
| 729.6
/ ‑4.5
| 211 | T411A (ACA→GCA) | btuB | BtuB |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (109/101); total (109/102) |
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.94e-01 |
Only 100 of 216 total aligned reads displayed.
GATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGC > NC_000913/4162358‑4162537
|
tAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATc > 2:450496/1‑93 (MQ=255)
aaCTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCt < 2:856940/93‑1 (MQ=255)
aaCTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCt < 1:176786/93‑1 (MQ=255)
aaCTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCt < 2:166327/93‑1 (MQ=255)
aaCTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCt > 1:6159330/1‑93 (MQ=255)
aCTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCtt < 2:2968373/93‑1 (MQ=255)
tCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTtat < 1:5616025/93‑1 (MQ=255)
cacaGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTtata < 1:6198072/93‑1 (MQ=255)
acaGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATaa < 1:4152662/93‑1 (MQ=255)
aGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAgg > 2:5658471/1‑93 (MQ=255)
gTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGc > 2:5748003/1‑93 (MQ=255)
tttGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCa > 1:1022631/1‑93 (MQ=255)
ggTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTCCCTACGGGGCATCTTATAAGGCACCa > 2:1230570/1‑93 (MQ=255)
gtcgtcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCaa > 2:4301833/1‑93 (MQ=255)
gtcgtcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCaa > 2:3316593/1‑93 (MQ=255)
tcgtcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCaaa > 1:5170719/1‑93 (MQ=255)
gtcATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATc < 1:4980215/93‑1 (MQ=255)
cATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTg > 1:5622709/1‑93 (MQ=255)
aTGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTgg < 1:2851746/93‑1 (MQ=255)
aTGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTgg < 2:6459141/93‑1 (MQ=255)
tGGAACCTGGCAAACCAGCGCCGGGTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTggg > 2:1686512/1‑93 (MQ=255)
ggAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTgggg < 1:3888926/93‑1 (MQ=255)
ggAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTgggg < 2:256377/93‑1 (MQ=255)
ggAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTgggg > 1:6277861/1‑93 (MQ=255)
gacccTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGc < 1:3086900/90‑1 (MQ=255)
gAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGc < 2:2935267/93‑1 (MQ=255)
aaCCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCa < 1:3539352/93‑1 (MQ=255)
aCCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCaa > 1:5037306/1‑93 (MQ=255)
ccTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAAc > 2:4898656/1‑93 (MQ=255)
cTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACt < 2:6424187/93‑1 (MQ=255)
tGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTg < 1:1217652/93‑1 (MQ=255)
gCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTa < 1:6028635/93‑1 (MQ=255)
cAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTAt < 1:2300405/93‑1 (MQ=255)
cAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTAt > 1:700928/1‑93 (MQ=255)
aaaCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATg < 1:4265631/93‑1 (MQ=255)
aaaCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATg < 1:5976980/93‑1 (MQ=255)
aaaCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATg > 2:1086007/1‑93 (MQ=255)
aCCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGc > 2:1780437/1‑93 (MQ=255)
ccAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCt < 2:2089275/93‑1 (MQ=255)
cAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCtt > 2:1088093/1‑93 (MQ=255)
aGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTc < 1:4868207/93‑1 (MQ=255)
aGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTc > 2:4428245/1‑93 (MQ=255)
aGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTc > 2:900532/1‑93 (MQ=255)
gcgcCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCt > 2:3212695/1‑93 (MQ=255)
cgcCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTa < 2:1340127/93‑1 (MQ=255)
cgcCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTa < 2:3045471/93‑1 (MQ=255)
gcCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTAc < 2:5219511/93‑1 (MQ=255)
gcCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTAc < 2:6403315/93‑1 (MQ=255)
ccGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACg > 1:2238457/1‑93 (MQ=255)
cGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACgg > 2:5582472/1‑93 (MQ=255)
ggTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGa < 2:497683/93‑1 (MQ=255)
ggTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGa < 2:2477082/93‑1 (MQ=255)
gTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGaa > 2:1109141/1‑93 (MQ=255)
tGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAAt < 1:5305287/93‑1 (MQ=255)
gggAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATc > 1:3607003/1‑93 (MQ=255)
ggAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATcc < 1:4559670/93‑1 (MQ=255)
gAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCg > 2:4493202/1‑93 (MQ=255)
gAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCg < 2:4598801/93‑1 (MQ=255)
aaTTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGa < 1:5530975/93‑1 (MQ=255)
aTTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGaa > 1:1990791/1‑93 (MQ=255)
aTTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGaa < 1:2693521/93‑1 (MQ=255)
aTTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTCCTACGGAAATCCGaa < 2:3109326/93‑1 (MQ=255)
cATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCt < 1:2490095/93‑1 (MQ=255)
cATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCt > 2:2716667/1‑93 (MQ=255)
cATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCt > 2:4582536/1‑93 (MQ=255)
cATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCt < 1:3836765/93‑1 (MQ=255)
aTCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTg < 2:3572711/93‑1 (MQ=255)
aTCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTg > 1:1518755/1‑93 (MQ=255)
aTCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAAGCACCAAATCTGGGGCAGCTGTATGGCTTCTACGGAAATCCAGATCTg > 1:3443389/1‑93 (MQ=255)
gAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAc > 1:5803118/1‑93 (MQ=255)
aaGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAcc < 2:2552824/93‑1 (MQ=255)
aaGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAcc > 2:2348016/1‑93 (MQ=255)
aGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAccc > 1:4708360/1‑93 (MQ=255)
ggTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCg < 1:548399/93‑1 (MQ=255)
ttATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCggg > 2:479898/1‑92 (MQ=255)
tATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGgag > 1:6430723/1‑93 (MQ=255)
aTCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGgaga > 2:3641183/1‑93 (MQ=255)
aTCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGgaga < 2:1175757/93‑1 (MQ=255)
cGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGaaa > 2:5518256/1‑93 (MQ=255)
cTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAg > 2:46489/1‑93 (MQ=255)
ttCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGc > 2:185787/1‑93 (MQ=255)
tCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCa > 2:3795211/1‑93 (MQ=255)
aTTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCaaa > 2:124235/1‑93 (MQ=255)
aTTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCaaa > 1:2048642/1‑93 (MQ=255)
ttGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAc > 1:349040/1‑93 (MQ=255)
ttGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAc < 1:4005814/93‑1 (MQ=255)
ttGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAc > 1:5419143/1‑93 (MQ=255)
ttGCTTCCTACGGGGCATCTTATAAGACTCCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAc < 2:5265418/93‑1 (MQ=255)
gCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAg > 2:5058091/1‑93 (MQ=255)
gCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAg > 2:1466632/1‑93 (MQ=255)
cTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGt > 2:5814158/1‑93 (MQ=255)
ttCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTg > 2:2510534/1‑93 (MQ=255)
ttCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTg > 1:5773172/1‑93 (MQ=255)
ccTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTggg < 2:3896862/93‑1 (MQ=255)
ccTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTggg < 1:1448347/93‑1 (MQ=255)
tACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGaa < 2:922670/93‑1 (MQ=255)
tACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGaa < 2:5378464/93‑1 (MQ=255)
aCGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAg < 2:3667364/93‑1 (MQ=255)
aCGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAg > 2:4089054/1‑93 (MQ=255)
ggggCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGgc < 1:823721/93‑1 (MQ=255)
|
GATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGC > NC_000913/4162358‑4162537
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGCG > NC_000913/4162355‑4162540
|
GACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGG > SRR4302534.3991750/1‑94 (MQ=60)
CGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCA < SRR4302534.4908571/94‑1 (MQ=60)
GATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCAT < SRR4302534.2817506/94‑1 (MQ=60)
ATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATC > SRR4302534.2284691/1‑94 (MQ=60)
TAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCT > SRR4302534.6326857/1‑94 (MQ=60)
TAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCT < SRR4302534.2084633/94‑1 (MQ=60)
AACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTT < SRR4302534.181439/94‑1 (MQ=60)
TCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATA < SRR4302534.5767987/94‑1 (MQ=60)
CACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAA > SRR4302534.6404865/1‑94 (MQ=60)
CACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAA < SRR4302534.6366675/94‑1 (MQ=60)
ACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAG < SRR4302534.4264761/94‑1 (MQ=60)
ACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAG < SRR4302534.4048325/94‑1 (MQ=60)
CAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGG < SRR4302534.6240939/94‑1 (MQ=60)
GTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCA < SRR4302534.527035/94‑1 (MQ=60)
GTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCA > SRR4302534.1048961/1‑94 (MQ=60)
TGGTCGTCATGGAGCCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCA < SRR4302534.5982767/94‑1 (MQ=60)
GTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAA > SRR4302534.5310091/1‑94 (MQ=60)
GTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCT < SRR4302534.5115008/94‑1 (MQ=60)
TCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTG > SRR4302534.2719773/1‑94 (MQ=60)
TCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTG > SRR4302534.5774859/1‑94 (MQ=60)
CATGGAACCTGGCAAACCTGCGCCGGCTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGG > SRR4302534.3974413/1‑94 (MQ=60)
CATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGG > SRR4302534.1897050/1‑94 (MQ=60)
ATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGG < SRR4302534.2354636/94‑1 (MQ=60)
ATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGG < SRR4302534.2926666/94‑1 (MQ=60)
ATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGG > SRR4302534.3090170/1‑94 (MQ=60)
TGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGG > SRR4302534.25197/1‑94 (MQ=60)
TGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGG > SRR4302534.6447778/1‑94 (MQ=60)
GGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGC > SRR4302534.5080713/1‑94 (MQ=60)
GGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGC < SRR4302534.3993326/94‑1 (MQ=60)
GACCCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCA < SRR4302534.3168019/94‑1 (MQ=60)
AACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAA < SRR4302534.3634569/94‑1 (MQ=60)
AACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAA > SRR4302534.5173360/1‑94 (MQ=60)
AACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAA > SRR4302534.113418/1‑94 (MQ=60)
AACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAA > SRR4302534.4352513/1‑94 (MQ=60)
ACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGTTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAAC < SRR4302534.5747255/94‑1 (MQ=60)
ACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAAC > SRR4302534.6160036/1‑94 (MQ=60)
TGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGT < SRR4302534.1249698/94‑1 (MQ=60)
GCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTAT > SRR4302534.718105/1‑94 (MQ=60)
GCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTAT > SRR4302534.4900184/1‑94 (MQ=60)
GCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTAT < SRR4302534.6192454/94‑1 (MQ=60)
CAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATG < SRR4302534.2361470/94‑1 (MQ=60)
AAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGG < SRR4302534.6139312/94‑1 (MQ=60)
AAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGG < SRR4302534.4380858/94‑1 (MQ=60)
AACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGC > SRR4302534.5774686/1‑94 (MQ=60)
ACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATTGCT < SRR4302534.854321/94‑1 (MQ=60)
ACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCT > SRR4302534.3235962/1‑94 (MQ=60)
CAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTC > SRR4302534.784959/1‑94 (MQ=60)
CAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTC > SRR4302534.3589474/1‑94 (MQ=60)
AGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCT < SRR4302534.5000265/94‑1 (MQ=60)
AGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCA < SRR4302534.4099553/94‑1 (MQ=60)
GCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACG > SRR4302534.2297773/1‑94 (MQ=60)
GCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACG < SRR4302534.1506133/94‑1 (MQ=60)
CGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGA < SRR4302534.5945934/94‑1 (MQ=60)
GGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAA > SRR4302534.6645786/1‑94 (MQ=60)
TGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATC < SRR4302534.5448426/94‑1 (MQ=60)
TGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATC > SRR4302534.3704005/1‑94 (MQ=60)
GGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCG < SRR4302534.4683291/94‑1 (MQ=60)
GGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCG < SRR4302534.5902632/94‑1 (MQ=60)
GAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGA > SRR4302534.3524406/1‑94 (MQ=60)
GAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGA < SRR4302534.2292080/94‑1 (MQ=60)
AATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAA > SRR4302534.2042921/1‑94 (MQ=60)
AATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAA < SRR4302534.5680267/94‑1 (MQ=60)
ATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAAT < SRR4302534.2764687/94‑1 (MQ=60)
CATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTG < SRR4302534.3939818/94‑1 (MQ=60)
CATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTG > SRR4302534.1558643/1‑94 (MQ=60)
CATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTG < SRR4302534.2556238/94‑1 (MQ=60)
CATCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAAGCACCAAATCTGGGGCAGCTGTATGGCTTCTACGGAAATCCAGATCTG > SRR4302534.3535933/1‑94 (MQ=60)
TCGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGA < SRR4302534.5549400/94‑1 (MQ=60)
CGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAC > SRR4302534.3926629/1‑94 (MQ=60)
CGAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGAC > SRR4302534.5960604/1‑94 (MQ=60)
GAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACC > SRR4302534.5718405/1‑94 (MQ=60)
GAAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACC < SRR4302534.6238233/94‑1 (MQ=60)
AAGGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCC > SRR4302534.4836190/1‑94 (MQ=60)
GGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGG < SRR4302534.561929/94‑1 (MQ=60)
GGTTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGG < SRR4302534.5073025/94‑1 (MQ=60)
TTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAG > SRR4302534.6604097/1‑94 (MQ=60)
TTATCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTCGACCCGGAG < SRR4302534.6452013/94‑1 (MQ=60)
TCGCTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAA > SRR4302534.5645590/1‑94 (MQ=60)
CTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGC > SRR4302534.1440980/1‑94 (MQ=60)
CTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGC > SRR4302534.3558026/1‑94 (MQ=60)
CTTCATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGC > SRR4302534.5313084/1‑94 (MQ=60)
CATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAA > SRR4302534.2102185/1‑94 (MQ=60)
ATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAC < SRR4302534.1680673/94‑1 (MQ=60)
ATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAC > SRR4302534.357983/1‑94 (MQ=60)
ATTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAAC > SRR4302534.5564954/1‑94 (MQ=60)
TTGCTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACA < SRR4302534.4113069/94‑1 (MQ=60)
CTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTG > SRR4302534.3637834/1‑94 (MQ=60)
CTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTG > SRR4302534.5929787/1‑94 (MQ=60)
CTTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTG > SRR4302534.4713933/1‑94 (MQ=60)
TTCCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGG < SRR4302534.4509524/94‑1 (MQ=60)
CCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGA < SRR4302534.5602691/94‑1 (MQ=60)
CCTACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGA < SRR4302534.1486466/94‑1 (MQ=60)
ACGGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGG < SRR4302534.4220319/94‑1 (MQ=60)
GGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCG < SRR4302534.6366232/94‑1 (MQ=60)
GGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCG < SRR4302534.5157166/94‑1 (MQ=60)
GGGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCG < SRR4302534.844444/94‑1 (MQ=60)
GGGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGC < SRR4302534.4463178/94‑1 (MQ=60)
GGCATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGCG > SRR4302534.4873371/1‑94 (MQ=60)
|
GACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGCG > NC_000913/4162355‑4162540
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
