Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,311,496	+C	coding (301/408 nt)	phnQ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,311,495	1	.	C	99.5%	1281.8 / ‑1.9	370	coding (302/408 nt)	phnQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/2); new base C (193/175); total (193/177)
Fisher's exact test for biased strand distribution p-value = 2.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 405 total aligned reads displayed.

GAGTAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑C‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCG  >  NC_000913/4311403‑4311582

   tAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑ccg                                                                                       >  1:636675/1‑91 (MQ=255)

     aTGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑ccgtt                                                                                     >  2:6454515/1‑89 (MQ=255)

     aTGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑ccgtt                                                                                     >  2:7427377/1‑89 (MQ=255)

     aTGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑ccgtt                                                                                     >  2:8098702/1‑89 (MQ=255)

       gATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTcc                                                                                   >  2:8444768/1‑93 (MQ=255)

        aTTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCg                                                                                  >  1:946573/1‑93 (MQ=255)

         ttAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTACTGAAACGCTTTCCGCTATTTCTTTTATTAACCCTGCTAACGCTGCCCACC‑GTTCCgc                                                                                 >  1:1656156/1‑92 (MQ=255)

         ttAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCgg                                                                                 <  2:2099050/93‑1 (MQ=255)

           aaTGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGcc                                                                               >  1:5359097/1‑93 (MQ=255)

            aTGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGccc                                                                              <  1:5212620/93‑1 (MQ=255)

             tgtgGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCa                                                                             <  2:7707022/93‑1 (MQ=255)

              gtgGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAg                                                                            >  1:4404354/1‑93 (MQ=255)

              gtgGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAg                                                                            <  2:1036308/93‑1 (MQ=255)

                 gATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGcc                                                                         >  2:82726/1‑93 (MQ=255)

                  aTAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCg                                                                        <  2:1599813/93‑1 (MQ=255)

                  aTAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCg                                                                        <  1:2042198/93‑1 (MQ=255)

                   tAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGa                                                                       <  1:7684885/93‑1 (MQ=255)

                     gagTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGata                                                                     <  2:351615/93‑1 (MQ=255)

                      agTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGatat                                                                    <  2:4982549/93‑1 (MQ=255)

                      agTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGatat                                                                    >  1:7552908/1‑93 (MQ=255)

                      agTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGatat                                                                    <  2:4893058/93‑1 (MQ=255)

                       gTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGAtatt                                                                   >  1:6775724/1‑93 (MQ=255)

                        tttCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGAtatta                                                                  <  2:6888659/93‑1 (MQ=255)

                          tCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATc                                                                >  1:3820459/1‑93 (MQ=255)

                          tCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATc                                                                >  2:5198500/1‑93 (MQ=255)

                          tCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATc                                                                >  2:4274789/1‑93 (MQ=255)

                            tttttGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCTAGGCCGATATTATcga                                                              <  2:7253235/93‑1 (MQ=255)

                            tttttGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATcga                                                              >  1:7767129/1‑93 (MQ=255)

                               ttGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATcgacga                                                           >  2:3013772/1‑93 (MQ=255)

                                tGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCgacgac                                                          >  1:3539823/1‑93 (MQ=255)

                                tGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTACCgacgac                                                          <  2:5323467/93‑1 (MQ=255)

                                  aGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGacac                                                        <  2:3459797/93‑1 (MQ=255)

                                    gTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGACCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCa                                                      >  2:2877821/1‑93 (MQ=255)

                                    gTTGACTATAGATACGATTTCCGCTAATTCTTTTATACACCATGCTCACGCTGTCCACC‑GTTCCGGCACAGACCGGAATTATCGACGaaacat                                                      <  2:7844641/93‑3 (MQ=255)

                                     ttGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCAt                                                     <  2:5446266/93‑1 (MQ=255)

                                      tGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCAtt                                                    >  2:1787798/1‑93 (MQ=255)

                                      tGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCAtt                                                    <  1:802369/93‑1 (MQ=255)

                                       ggCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTACCGACGACACCATTg                                                   <  2:8665352/93‑1 (MQ=255)

                                        gCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTgg                                                  >  2:7554066/1‑93 (MQ=255)

                                         cTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGc                                                 >  2:3674452/1‑93 (MQ=255)

                                          tAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCa                                                >  1:3316290/1‑93 (MQ=255)

                                          tAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCa                                                >  2:1988869/1‑93 (MQ=255)

                                           aaTGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCaa                                               >  1:6151972/1‑93 (MQ=255)

                                           aaTGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCaa                                               <  2:3579298/93‑1 (MQ=255)

                                              gAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAatat                                            <  2:8534644/93‑1 (MQ=255)

                                              gAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAatat                                            <  1:5592304/93‑1 (MQ=255)

                                              gAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGAAatat                                            <  2:1250683/93‑1 (MQ=255)

                                                aaCGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTc                                          <  1:7071322/93‑1 (MQ=255)

                                                 aCGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTca                                         <  1:3928417/93‑1 (MQ=255)

                                                 aCGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTca                                         <  1:4244963/93‑1 (MQ=255)

                                                  cGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTcag                                        <  2:4448356/93‑1 (MQ=255)

                                                   gCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTcagc                                       <  1:624595/93‑1 (MQ=255)

                                                   gCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTcagc                                       >  1:8149158/1‑93 (MQ=255)

                                                    cTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTcagca                                      <  1:1609871/93‑1 (MQ=255)

                                                     tttCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTcagcag                                     >  1:4607516/1‑93 (MQ=255)

                                                     tttCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTcagcag                                     <  2:5863535/93‑1 (MQ=255)

                                                     tttCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTcagcag                                     >  2:7099457/1‑93 (MQ=255)

                                                       tCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCAATGGCAATATTcagcagcc                                   >  1:4855395/1‑91 (MQ=255)

                                                         cGCTATTTCTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGa                                 <  1:226979/93‑1 (MQ=255)

                                                         cGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGa                                 <  2:2638226/93‑1 (MQ=255)

                                                         cGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTAAGCAGGCGa                                 >  1:2666065/1‑93 (MQ=255)

                                                          gCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAt                                >  1:1905069/1‑93 (MQ=255)

                                                           ttATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAtt                               <  2:2522975/92‑1 (MQ=255)

                                                           cTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAtt                               >  1:1010414/1‑93 (MQ=255)

                                                           cTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAtt                               <  2:6670411/93‑1 (MQ=255)

                                                            tATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTa                              >  2:6779568/1‑93 (MQ=255)

                                                             aTTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTaa                             >  2:6534178/1‑93 (MQ=255)

                                                             aTTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTaa                             >  1:4465377/1‑93 (MQ=255)

                                                              tttCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAAt                            <  2:3899210/93‑1 (MQ=255)

                                                               ttCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGCTTAATg                           >  1:4085231/1‑93 (MQ=255)

                                                                tCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGa                          >  2:7977649/1‑93 (MQ=255)

                                                                 cTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGAc                         <  1:6615244/93‑1 (MQ=255)

                                                                  ttttATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACg                        >  2:1360113/1‑93 (MQ=255)

                                                                   tttATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGc                       <  2:2347013/93‑1 (MQ=255)

                                                                    ttATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCt                      <  1:7944795/93‑1 (MQ=255)

                                                                    ttATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCt                      <  1:8600762/93‑1 (MQ=255)

                                                                     tATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCtt                     >  2:1658977/1‑93 (MQ=255)

                                                                      tttCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTta                    <  1:7392275/92‑1 (MQ=255)

                                                                       ttCTCCCTGCTCCCGCTGTCCA‑CTGTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACTCTtat                   <  2:3818942/93‑1 (MQ=255)

                                                                       ttCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTtat                   >  1:5016447/1‑93 (MQ=255)

                                                                         cACCCTGCTCACGCTGTCGACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCCGCAGGCGATTAATGACGCTTATaa                 >  1:146774/1‑93 (MQ=255)

                                                                         cACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATaa                 <  1:2772832/93‑1 (MQ=255)

                                                                          aCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAc                <  1:5985843/93‑1 (MQ=255)

                                                                          aCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGAAGGCGATTAATGACGCTTATAAc                >  1:1787837/1‑93 (MQ=255)

                                                                           cccTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAcc               >  1:1198444/1‑93 (MQ=255)

                                                                           cccTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAcc               >  1:241942/1‑93 (MQ=255)

                                                                            ccTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAccc              <  2:6160539/93‑1 (MQ=255)

                                                                            ccTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAccc              >  1:4729499/1‑93 (MQ=255)

                                                                            ccTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAccc              >  1:683290/1‑93 (MQ=255)

                                                                              tGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTg            <  1:5689788/93‑1 (MQ=255)

                                                                                cTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGAc          <  2:3136976/93‑1 (MQ=255)

                                                                                 tCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGAcc         >  1:2522936/1‑93 (MQ=255)

                                                                                  cACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCg        >  2:3285661/1‑93 (MQ=255)

                                                                                  cACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCg        <  2:6217693/93‑1 (MQ=255)

                                                                                   aCGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGt       >  2:5648571/1‑93 (MQ=255)

                                                                                   aCGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGt       >  1:4945068/1‑93 (MQ=255)

                                                                                   aCGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGt       <  2:4520542/93‑1 (MQ=255)

                                                                                    cGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAGTAATGACGCTTATAACCCTGACCGTg      <  2:1528469/93‑1 (MQ=255)

                                                                                     gCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTgg     <  1:3070705/93‑1 (MQ=255)

                                                                                      cTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTggg    <  2:2246481/93‑1 (MQ=255)

GAGTAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑C‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCG  >  NC_000913/4311403‑4311582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 204 total aligned reads displayed.

AGTAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑C‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACTAT  >  NC_000913/4311404‑4311589

AGTAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑C‑C                                                                                              <  SRR4302541.7521122/94‑1 (MQ=60)

 GTAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑Ccg                                                                                              >  SRR4302541.642657/1‑92 (MQ=60)

 GTAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑Ccg                                                                                              >  SRR4302541.1987287/1‑92 (MQ=60)

  TAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑Ccgt                                                                                             >  SRR4302541.4495047/1‑91 (MQ=60)

    ATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTC                                                                                           >  SRR4302541.866681/1‑94 (MQ=60)

     TGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCC                                                                                          <  SRR4302541.1238692/94‑1 (MQ=60)

     TGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCC                                                                                          <  SRR4302541.4073319/94‑1 (MQ=60)

     TGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCC                                                                                          >  SRR4302541.7754915/1‑94 (MQ=60)

     TGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCC                                                                                          <  SRR4302541.2081115/94‑1 (MQ=60)

      GATTAATGTGGATAGTGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCG                                                                                         <  SRR4302541.1838204/94‑1 (MQ=60)

      GATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCG                                                                                         >  SRR4302541.955574/1‑94 (MQ=60)

      GATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCG                                                                                         >  SRR4302541.5820712/1‑94 (MQ=60)

      GATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCG                                                                                         >  SRR4302541.7117555/1‑94 (MQ=60)

       ATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGG                                                                                        >  SRR4302541.5008411/1‑94 (MQ=60)

         TAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCC                                                                                      <  SRR4302541.4165386/94‑1 (MQ=60)

         TAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCC                                                                                      >  SRR4302541.5414142/1‑94 (MQ=60)

          AATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCC                                                                                     <  SRR4302541.7790749/94‑1 (MQ=60)

          AATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCC                                                                                     >  SRR4302541.809004/1‑94 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCA                                                                                    <  SRR4302541.5266327/94‑1 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCG                                                                                    >  SRR4302541.6299916/1‑94 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCA                                                                                    <  SRR4302541.6641072/94‑1 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCA                                                                                    >  SRR4302541.4305829/1‑94 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCA                                                                                    <  SRR4302541.2398620/94‑1 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCA                                                                                    >  SRR4302541.6695064/1‑94 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCA                                                                                    <  SRR4302541.6641073/94‑1 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCA                                                                                    <  SRR4302541.6293020/94‑1 (MQ=60)

           ATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCA                                                                                    <  SRR4302541.5266326/94‑1 (MQ=60)

            TGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAG                                                                                   <  SRR4302541.2607128/94‑1 (MQ=60)

            TGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAG                                                                                   <  SRR4302541.2177162/94‑1 (MQ=60)

            TGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAG                                                                                   >  SRR4302541.4448416/1‑94 (MQ=60)

              TGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGC                                                                                 >  SRR4302541.7716496/1‑94 (MQ=60)

              TGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGC                                                                                 >  SRR4302541.364888/1‑94 (MQ=60)

               GGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCC                                                                                <  SRR4302541.1390723/94‑1 (MQ=60)

               GGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCC                                                                                >  SRR4302541.1608318/1‑94 (MQ=60)

               GGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCC                                                                                >  SRR4302541.299498/1‑94 (MQ=60)

                GATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCG                                                                               >  SRR4302541.4462981/1‑94 (MQ=60)

                 ATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGA                                                                              >  SRR4302541.3971656/1‑94 (MQ=60)

                 ATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGA                                                                              <  SRR4302541.7577770/94‑1 (MQ=60)

                 ATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGA                                                                              <  SRR4302541.2061905/94‑1 (MQ=60)

                  TAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGAT                                                                             <  SRR4302541.7766593/94‑1 (MQ=60)

                   AGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATA                                                                            >  SRR4302541.4725829/1‑94 (MQ=60)

                    GAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCTGGCACAGGCAGATAT                                                                           >  SRR4302541.7633615/1‑94 (MQ=60)

                    GAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATAT                                                                           <  SRR4302541.4966097/94‑1 (MQ=60)

                    GAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATAT                                                                           >  SRR4302541.7633616/1‑94 (MQ=60)

                     AGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATT                                                                          >  SRR4302541.6848193/1‑94 (MQ=60)

                     AGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATT                                                                          <  SRR4302541.4807871/94‑1 (MQ=60)

                     AGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATT                                                                          >  SRR4302541.1618990/1‑94 (MQ=60)

                      GTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTA                                                                         <  SRR4302541.548229/94‑1 (MQ=60)

                      GTTTCTTTTTGAGGTTGGCTAATGAAACGCTTGCCTCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTA                                                                         <  SRR4302541.548228/94‑1 (MQ=60)

                       TTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTAT                                                                        <  SRR4302541.2398249/94‑1 (MQ=60)

                        TTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATC                                                                       >  SRR4302541.5896123/1‑94 (MQ=60)

                        TTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATC                                                                       >  SRR4302541.3858943/1‑94 (MQ=60)

                        TTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATC                                                                       >  SRR4302541.3320212/1‑94 (MQ=60)

                         TCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCG                                                                      <  SRR4302541.3135348/94‑1 (MQ=60)

                          CTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGA                                                                     >  SRR4302541.2180878/1‑94 (MQ=60)

                          CTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGA                                                                     >  SRR4302541.7849754/1‑94 (MQ=60)

                           TTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGAC                                                                    <  SRR4302541.3308438/94‑1 (MQ=60)

                           TTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGAC                                                                    <  SRR4302541.8869233/94‑1 (MQ=60)

                           TTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGAC                                                                    >  SRR4302541.5683280/1‑94 (MQ=60)

                              TTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGAC                                                                 >  SRR4302541.3575523/1‑94 (MQ=60)

                               TGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACA                                                                <  SRR4302541.6392198/94‑1 (MQ=60)

                               TGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACA                                                                >  SRR4302541.2472062/1‑94 (MQ=60)

                                GAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACAC                                                               >  SRR4302541.4845700/1‑94 (MQ=60)

                                 AGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACC                                                              >  SRR4302541.1119961/1‑94 (MQ=60)

                                  GGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCA                                                             <  SRR4302541.3350960/94‑1 (MQ=60)

                                   GTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCAT                                                            >  SRR4302541.5275765/1‑94 (MQ=60)

                                    TTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATT                                                           <  SRR4302541.1587627/94‑1 (MQ=60)

                                     TGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTG                                                          <  SRR4302541.809743/94‑1 (MQ=60)

                                     TGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTG                                                          >  SRR4302541.8829800/1‑94 (MQ=60)

                                     TGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTG                                                          <  SRR4302541.4365318/94‑1 (MQ=60)

                                     TGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTG                                                          >  SRR4302541.3968257/1‑94 (MQ=60)

                                      GGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGG                                                         <  SRR4302541.1430799/94‑1 (MQ=60)

                                      GGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGG                                                         <  SRR4302541.2472587/94‑1 (MQ=60)

                                      GGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGG                                                         >  SRR4302541.5292336/1‑94 (MQ=60)

                                      GGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGG                                                         <  SRR4302541.6934587/94‑1 (MQ=60)

                                       GCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGC                                                        <  SRR4302541.5033155/94‑1 (MQ=60)

                                        CTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCA                                                       >  SRR4302541.3349566/1‑94 (MQ=60)

                                        CTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCA                                                       >  SRR4302541.3899131/1‑94 (MQ=60)

                                         TAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAA                                                      >  SRR4302541.8822327/1‑94 (MQ=60)

                                         TAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAA                                                      <  SRR4302541.6852016/94‑1 (MQ=60)

                                         TAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAA                                                      >  SRR4302541.6214829/1‑94 (MQ=60)

                                          AATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAAT                                                     <  SRR4302541.8071021/94‑1 (MQ=60)

                                          AATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAAT                                                     >  SRR4302541.7997686/1‑94 (MQ=60)

                                             GAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATT                                                  <  SRR4302541.5649549/94‑1 (MQ=60)

                                               AACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCA                                                <  SRR4302541.7146523/94‑1 (MQ=60)

                                               AACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCA                                                <  SRR4302541.1107377/94‑1 (MQ=60)

                                               AACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCA                                                <  SRR4302541.8402225/94‑1 (MQ=60)

                                                ACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAG                                               <  SRR4302541.4287344/94‑1 (MQ=60)

                                                ACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAG                                               <  SRR4302541.3967560/94‑1 (MQ=60)

                                                ACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAG                                               <  SRR4302541.2350188/94‑1 (MQ=60)

                                                 CGCTTTCCGCTATTTCTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGC                                              <  SRR4302541.6246868/94‑1 (MQ=60)

                                                 CGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGC                                              >  SRR4302541.5236450/1‑94 (MQ=60)

                                                 CGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGC                                              >  SRR4302541.8043159/1‑94 (MQ=60)

                                                 CGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGC                                              >  SRR4302541.8238255/1‑94 (MQ=60)

                                                  GCTTTCCTCTATTTCTTTTATTCACCCTGCTCACGTTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCA                                             <  SRR4302541.277508/94‑1 (MQ=60)

                                                  GCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCG                                             >  SRR4302541.2259341/1‑94 (MQ=60)

                                                  GCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCA                                             <  SRR4302541.5365456/94‑1 (MQ=60)

                                                  GCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCA                                             <  SRR4302541.630461/94‑1 (MQ=60)

                                                   CTTTCCTCTATTTCTTTTATTCACCCTGCTCGCGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAG                                            <  SRR4302541.7691801/94‑1 (MQ=60)

                                                   CTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAG                                            <  SRR4302541.1625871/94‑1 (MQ=60)

                                                   CTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAG                                            <  SRR4302541.4496677/94‑1 (MQ=60)

                                                   CTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAG                                            >  SRR4302541.4654298/1‑94 (MQ=60)

                                                   CTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAG                                            <  SRR4302541.6850895/94‑1 (MQ=60)

                                                   CTTTCCGCTATTTCTTCTATTCGCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGCCGACACCATTGGCAATATTCAGCAG                                            <  SRR4302541.6969191/94‑1 (MQ=60)

                                                    TTTCCGCTATTTCTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGG                                           <  SRR4302541.399574/94‑1 (MQ=60)

                                                     TTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGC                                          >  SRR4302541.4904901/1‑94 (MQ=60)

                                                     TTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCAATGGCAATATTCAGCAGCC                                          >  SRR4302541.4904900/1‑94 (MQ=60)

                                                      TCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCG                                         >  SRR4302541.6334239/1‑94 (MQ=60)

                                                       CCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTAAGCAGGCGA                                        >  SRR4302541.2692567/1‑94 (MQ=60)

                                                        CGCTATTTCTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAT                                       <  SRR4302541.228735/94‑1 (MQ=60)

                                                        CGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAT                                       <  SRR4302541.1935205/94‑1 (MQ=60)

                                                        CGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAT                                       <  SRR4302541.7828865/94‑1 (MQ=60)

                                                        CGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAT                                       <  SRR4302541.6593404/94‑1 (MQ=60)

                                                        CGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAT                                       >  SRR4302541.1923371/1‑94 (MQ=60)

                                                        CGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGAT                                       >  SRR4302541.1658476/1‑94 (MQ=60)

                                                         GCTATTTCTTTTATTCACCCTGCTCTCGCTGGCCACC‑GTTCCGTCCCAGGCCGATATAATCGACGACACCATTGGCAATATTCAGCAGGCGATT                                      <  SRR4302541.4705769/94‑1 (MQ=60)

                                                         GCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATT                                      >  SRR4302541.1019769/1‑94 (MQ=60)

                                                         GCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATT                                      >  SRR4302541.3530596/1‑94 (MQ=60)

                                                         GCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATT                                      <  SRR4302541.4705770/94‑1 (MQ=60)

                                                          CTATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTA                                     >  SRR4302541.8230345/1‑94 (MQ=60)

                                                           TATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAA                                    <  SRR4302541.8230576/94‑1 (MQ=60)

                                                           TATTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAA                                    >  SRR4302541.4510344/1‑94 (MQ=60)

                                                            ATTTCTTTTAGTCACCCTGCTCACGCTGTCCACC‑GTCCCGTCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAAT                                   <  SRR4302541.1053146/94‑1 (MQ=60)

                                                             TTTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGCTTAATG                                  >  SRR4302541.4125550/1‑94 (MQ=60)

                                                              TTCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGA                                 >  SRR4302541.3942454/1‑94 (MQ=60)

                                                               TCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGAC                                <  SRR4302541.8314816/94‑1 (MQ=60)

                                                               TCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGAC                                >  SRR4302541.4239855/1‑94 (MQ=60)

                                                               TCTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGAC                                >  SRR4302541.3936535/1‑94 (MQ=60)

                                                                CTTTTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACG                               <  SRR4302541.6683046/94‑1 (MQ=60)

                                                                CTTTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACG                               <  SRR4302541.499121/94‑1 (MQ=60)

                                                                  TTTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCT                             >  SRR4302541.6076503/1‑94 (MQ=60)

                                                                   TTATTCCCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTT                            <  SRR4302541.8032307/94‑1 (MQ=60)

                                                                   TTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTT                            <  SRR4302541.7296878/94‑1 (MQ=60)

                                                                   TTATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTT                            <  SRR4302541.8693031/94‑1 (MQ=60)

                                                                     TTTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTAT                          <  SRR4302541.7471326/94‑1 (MQ=60)

                                                                     ATTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTAT                          >  SRR4302541.5068013/1‑94 (MQ=60)

                                                                      TTCGCCCTGCTCACGCTGTCCA‑CAGTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATA                         <  SRR4302541.5067267/94‑1 (MQ=60)

                                                                      TTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATA                         >  SRR4302541.1627313/1‑94 (MQ=60)

                                                                      TTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATA                         <  SRR4302541.8258265/94‑1 (MQ=60)

                                                                      TTCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATA                         >  SRR4302541.4254291/1‑94 (MQ=60)

                                                                       TCACCCTGCTCACGCTGTCGACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCCGCAGGCGATTAATGACGCTTATAA                        >  SRR4302541.147888/1‑94 (MQ=60)

                                                                       TCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAA                        >  SRR4302541.267960/1‑94 (MQ=60)

                                                                       TCACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAA                        >  SRR4302541.2601197/1‑94 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAC                       <  SRR4302541.1962156/94‑1 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAC                       >  SRR4302541.171440/1‑94 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAC                       >  SRR4302541.342682/1‑94 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAC                       >  SRR4302541.5453275/1‑94 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAC                       <  SRR4302541.2800758/94‑1 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAC                       >  SRR4302541.4628496/1‑94 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAAC                       >  SRR4302541.7887927/1‑94 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATCACGCTTATAAC                       >  SRR4302541.5866108/1‑94 (MQ=60)

                                                                        CACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGAAGGCGATTAATGACGCTTATAAC                       >  SRR4302541.1805205/1‑94 (MQ=60)

                                                                         CCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACC                      <  SRR4302541.4524915/94‑1 (MQ=60)

                                                                         CCCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACC                      <  SRR4302541.4524916/94‑1 (MQ=60)

                                                                         ACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACC                      >  SRR4302541.1210067/1‑94 (MQ=60)

                                                                         ACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACC                      >  SRR4302541.243868/1‑94 (MQ=60)

                                                                         ACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACC                      <  SRR4302541.6047131/94‑1 (MQ=60)

                                                                         ACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACC                      >  SRR4302541.7628353/1‑94 (MQ=60)

                                                                         ACCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACC                      >  SRR4302541.4446701/1‑94 (MQ=60)

                                                                          CCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCC                     >  SRR4302541.8019996/1‑94 (MQ=60)

                                                                          CCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCC                     >  SRR4302541.170267/1‑94 (MQ=60)

                                                                          CCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCC                     >  SRR4302541.3032753/1‑94 (MQ=60)

                                                                          CCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCC                     >  SRR4302541.1317184/1‑94 (MQ=60)

                                                                          CCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCC                     >  SRR4302541.689737/1‑94 (MQ=60)

                                                                          CCCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCC                     >  SRR4302541.4777760/1‑94 (MQ=60)

                                                                           CCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATGTTCAGCAGGCGATTAATGACGCTTATAACCCT                    <  SRR4302541.1686319/94‑1 (MQ=60)

                                                                           CCTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCT                    >  SRR4302541.3749243/1‑94 (MQ=60)

                                                                            CTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGAGACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTG                   >  SRR4302541.4439652/1‑94 (MQ=60)

                                                                            CTGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTG                   <  SRR4302541.1837159/94‑1 (MQ=60)

                                                                            CTGCTCACGCTGTAAACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATCTTGAGAAGGTGATTAATGACGCTTATACACCTG                   >  SRR4302541.1143185/1‑94 (MQ=57)

                                                                             TGCTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGA                  <  SRR4302541.5747833/94‑1 (MQ=60)

                                                                               CTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTTACC                <  SRR4302541.567421/94‑1 (MQ=60)

                                                                               CTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACC                <  SRR4302541.8158781/94‑1 (MQ=60)

                                                                               CTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACC                >  SRR4302541.6379106/1‑94 (MQ=60)

                                                                               CTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACC                >  SRR4302541.2548315/1‑94 (MQ=60)

                                                                               CTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACC                <  SRR4302541.6188886/94‑1 (MQ=60)

                                                                               CTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACC                >  SRR4302541.2500381/1‑94 (MQ=60)

                                                                               CTCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACC                >  SRR4302541.731399/1‑94 (MQ=60)

                                                                                TCACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCG               <  SRR4302541.6099354/94‑1 (MQ=60)

                                                                                 CACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGT              >  SRR4302541.4995582/1‑94 (MQ=60)

                                                                                 CACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGT              <  SRR4302541.378887/94‑1 (MQ=60)

                                                                                  ACGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTG             <  SRR4302541.671963/94‑1 (MQ=60)

                                                                                   CGCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGG            >  SRR4302541.5194077/1‑94 (MQ=60)

                                                                                    GCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGG           >  SRR4302541.978066/1‑94 (MQ=60)

                                                                                    GCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGG           <  SRR4302541.7834024/94‑1 (MQ=60)

                                                                                    GCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGG           <  SRR4302541.3101849/94‑1 (MQ=60)

                                                                                    GCTGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGG           >  SRR4302541.7420155/1‑94 (MQ=60)

                                                                                      TGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCG         >  SRR4302541.2750141/1‑94 (MQ=60)

                                                                                      TGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCG         >  SRR4302541.1666954/1‑94 (MQ=60)

                                                                                      TGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCG         >  SRR4302541.6869272/1‑94 (MQ=60)

                                                                                      TGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCG         >  SRR4302541.565305/1‑94 (MQ=60)

                                                                                      TGTCCACC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTAAGCAGGGGATTAATGACGCTTATAACCCTGACCGTGGGCG         >  SRR4302541.2750139/1‑94 (MQ=60)

                                                                                          cacC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGAC     >  SRR4302541.3279808/4‑94 (MQ=60)

                                                                                          CC‑C‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACT    <  SRR4302541.7556999/94‑1 (MQ=60)

                                                                                           acC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACT    >  SRR4302541.3643491/3‑94 (MQ=60)

                                                                                           acC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACT    >  SRR4302541.3807965/3‑94 (MQ=60)

                                                                                           acC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACT    >  SRR4302541.3807966/3‑94 (MQ=60)

                                                                                           acC‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACT    <  SRR4302541.640096/92‑1 (MQ=60)

                                                                                             C‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACTAT  >  SRR4302541.7011086/1‑94 (MQ=60)

                                                                                             C‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACTAT  >  SRR4302541.6596330/1‑94 (MQ=60)

AGTAATGATTAATGTGGATAGAGTTTCTTTTTGAGGTTGGCTAATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCA‑C‑GTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACTAT  >  NC_000913/4311404‑4311589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`