Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,325,494	C→G	A261G (GCG→GGG)	yjdA →	putative vimentin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,325,494	0	C	G	99.6%	922.1 / ‑5.5	267	A261G (GCG→GGG)	yjdA	putative vimentin
Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (133/133); minor base T (0/1); total (133/134)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 290 total aligned reads displayed.

AGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGCGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGC  >  NC_000913/4325404‑4325583

aGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTcggggg                                                                                         >  1:448993/1‑93 (MQ=255)

 gTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGt                                                                                        >  2:6099829/1‑93 (MQ=255)

 gTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGt                                                                                        >  2:5926007/1‑93 (MQ=255)

   tGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTAc                                                                                      <  1:7412620/93‑1 (MQ=255)

   tGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTAc                                                                                      <  2:8257342/93‑1 (MQ=255)

   tGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTAc                                                                                      <  2:1655249/93‑1 (MQ=255)

    gACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACt                                                                                     >  2:4029350/1‑93 (MQ=255)

    gACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACt                                                                                     <  1:1004356/93‑1 (MQ=255)

     aCGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTg                                                                                    <  2:5112558/93‑1 (MQ=255)

     aCGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTg                                                                                    >  2:1544213/1‑93 (MQ=255)

     aCGTGACTGGATACCCCCGGGCCAAATGAAGCCGTGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTg                                                                                    <  1:8130579/93‑1 (MQ=255)

       gTTACTGGATACCCCCGGGCCAACTGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGc                                                                                  <  1:7523031/93‑1 (MQ=255)

        ttACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCg                                                                                 <  1:1277299/93‑1 (MQ=255)

        ttACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCg                                                                                 <  1:4271035/93‑1 (MQ=255)

         tACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCgg                                                                                <  1:3124087/93‑1 (MQ=255)

          aCTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGt                                                                               <  1:5679202/93‑1 (MQ=255)

          aCTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGt                                                                               <  2:8226305/93‑1 (MQ=255)

           cTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTg                                                                              <  2:2742294/93‑1 (MQ=255)

           cTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTg                                                                              <  1:1104878/93‑1 (MQ=255)

            tGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGc                                                                             >  1:1981280/1‑93 (MQ=255)

             ggATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCt                                                                            <  2:3619157/93‑1 (MQ=255)

              gATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTg                                                                           >  1:3658891/1‑93 (MQ=255)

                   ccccGAGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATta                                                                      <  1:789096/93‑1 (MQ=255)

                    cccGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATtat                                                                     >  1:842735/1‑93 (MQ=255)

                    cccGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATtat                                                                     >  1:3398017/1‑93 (MQ=255)

                     ccGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATtata                                                                    <  1:225491/93‑1 (MQ=255)

                      cGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATAc                                                                   >  1:5858072/1‑93 (MQ=255)

                        ggCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGc                                                                 <  1:2648173/93‑1 (MQ=255)

                         gCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCa                                                                >  1:8005553/1‑93 (MQ=255)

                          caaaaTGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCaa                                                               <  1:6406678/91‑1 (MQ=255)

                           cAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAAc                                                              <  2:6195252/93‑1 (MQ=255)

                            aaaTGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACt                                                             <  1:4794095/93‑1 (MQ=255)

                            aaaTGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACCCAACt                                                             >  1:6741984/1‑93 (MQ=255)

                               tGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATCCGCAACTGaa                                                          >  2:1438689/1‑93 (MQ=255)

                               tGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGaa                                                          <  1:6247871/93‑1 (MQ=255)

                                 aaGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAAt                                                        <  2:5383706/93‑1 (MQ=255)

                                  aGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATc                                                       <  2:7752685/93‑1 (MQ=255)

                                  aGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATc                                                       <  2:7384989/93‑1 (MQ=255)

                                   gCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCg                                                      >  2:6417162/1‑93 (MQ=255)

                                      gggCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGAtc                                                   <  1:6875678/93‑1 (MQ=255)

                                      gggCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGAtc                                                   >  2:6003724/1‑93 (MQ=255)

                                      gggCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGAtc                                                   <  1:973282/93‑1 (MQ=255)

                                      gggCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGAtc                                                   >  1:4021960/1‑93 (MQ=255)

                                       ggCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGAtct                                                  >  1:1845567/1‑93 (MQ=255)

                                       ggCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGAtct                                                  >  2:7210936/1‑93 (MQ=255)

                                       ggCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGAtct                                                  >  2:8106104/1‑93 (MQ=255)

                                        gCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGAtctc                                                 <  2:2077507/93‑1 (MQ=255)

                                         cAACCGCGTCTGCAAAAAATGCTGAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTcc                                                <  1:8629578/93‑1 (MQ=255)

                                         cAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTcc                                                >  2:4553120/1‑93 (MQ=255)

                                         cAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTcc                                                <  1:7194576/93‑1 (MQ=255)

                                         cAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTcc                                                <  2:2334343/93‑1 (MQ=255)

                                           aCCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGa                                              <  1:5332797/93‑1 (MQ=255)

                                             cGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATg                                            <  2:69082/93‑1 (MQ=255)

                                              gCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGa                                           >  2:3079138/1‑93 (MQ=255)

                                               cATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGCTGaa                                          >  1:2704936/1‑93 (MQ=255)

                                               cATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGaa                                          >  2:4363846/1‑93 (MQ=255)

                                               cATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGaa                                          <  1:8303115/93‑1 (MQ=255)

                                                aTCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAag                                         <  2:8752096/93‑1 (MQ=255)

                                                aTCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGAACTTGCGGTGCTCGATTATACGCAACTGAAATCGATGCCCGATAAag                                         >  2:7092738/1‑93 (MQ=255)

                                                 tCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAaga                                        <  1:5575400/93‑1 (MQ=255)

                                                 tCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAaga                                        >  1:1639180/1‑93 (MQ=255)

                                                 tCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAaga                                        <  2:5568889/93‑1 (MQ=255)

                                                   tGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGCAATCGATCTCAGATGAAGAgg                                      >  2:2147958/1‑93 (MQ=255)

                                                   tGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAgg                                      >  2:2808388/1‑93 (MQ=255)

                                                   tGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAgg                                      <  1:3482549/93‑1 (MQ=255)

                                                      aaaaaaTGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTcc                                   >  1:5058070/1‑93 (MQ=255)

                                                      aaaaaaTGCTTAACCAGCAGCTGGCACGAGGCTCGGGGGTACTGGCGGGGCTGGATTATACGCAACTGAAATCGCTCTCCGATGAAGAGGTcc                                   >  2:8459125/1‑93 (MQ=255)

                                                      aaaaaaTGCTTAACCAGCAGCGGGCACGCGCCTCGGGGGTACTGGCGGGGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTcc                                   <  1:376286/93‑1 (MQ=255)

                                                           aTGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAg                              >  2:1382640/1‑93 (MQ=255)

                                                             gCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGc                            >  2:5288264/1‑93 (MQ=255)

                                                              cTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCg                           <  2:4229267/93‑1 (MQ=255)

                                                                 aaCCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGAtt                        >  2:1782788/1‑93 (MQ=255)

                                                                    cagcagCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTg                     <  1:8726860/93‑1 (MQ=255)

                                                                    cagcagCCGGCACGCGCCTCGGGGGTACTGGCGGTGCTTGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTg                     <  1:6595539/93‑1 (MQ=255)

                                                                     agcagcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTgg                    <  1:7330799/93‑1 (MQ=255)

                                                                     agcagcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTgg                    <  1:4117282/93‑1 (MQ=255)

                                                                      gcagcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGc                   <  2:3867895/93‑1 (MQ=255)

                                                                       cagcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCg                  >  1:5355592/1‑93 (MQ=255)

                                                                        agcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCgg                 >  2:6734076/1‑93 (MQ=255)

                                                                        agcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCgg                 >  1:6787890/1‑93 (MQ=255)

                                                                        agcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCgg                 >  2:3435627/1‑93 (MQ=255)

                                                                         gcTGGCCCGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGGAATCGATCTCCGATTACGAGGTCCGTGAGGGGATTTTCGCggg                >  1:5826837/1‑92 (MQ=255)

                                                                         gcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCggg                >  1:780445/1‑92 (MQ=255)

                                                                         gcTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCggg                >  2:6774725/1‑92 (MQ=255)

                                                                          gtGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTg               <  1:7650204/92‑1 (MQ=255)

                                                                          cTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTg               <  1:1577871/93‑1 (MQ=255)

                                                                          cTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTACGTGAGGCGATTTTGGCGGTg               <  1:1516685/93‑1 (MQ=255)

                                                                          cTGGCACGAGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATTTACGATGAATAGGTCCGTGAGGCGATTTTGGCGGTg               >  2:5710179/1‑93 (MQ=255)

                                                                               aCGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCa          >  1:6856472/1‑93 (MQ=255)

                                                                                 gcgcCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAAt        <  1:5174667/93‑1 (MQ=255)

                                                                                 gcgcCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAAt        <  1:4701388/93‑1 (MQ=255)

                                                                                 gcgcCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAAt        <  2:7948015/93‑1 (MQ=255)

                                                                                  cgcCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATc       <  2:3181406/93‑1 (MQ=255)

                                                                                  cgcCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATc       <  1:2390940/93‑1 (MQ=255)

                                                                                    ccTCGGGGTTGCTGGCGGTGCTGGATTCTACGCAATTGAAATCCATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCgg     <  1:2991168/93‑1 (MQ=255)

                                                                                    ccTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCgg     <  1:7087826/93‑1 (MQ=255)

                                                                                     cTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGt    >  2:4904350/1‑93 (MQ=255)

                                                                                       cgggggTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGc  <  1:933196/93‑1 (MQ=255)

                                                                                       cgggggTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGc  <  2:575137/93‑1 (MQ=255)

                                                                                       cgggggTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGc  <  2:4967447/93‑1 (MQ=255)

AGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGCGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGC  >  NC_000913/4325404‑4325583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTCAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGCGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGCT  >  NC_000913/4325401‑4325587

GTCAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGG                                                                                               <  SRR4302541.5544087/94‑1 (MQ=60)

GTCAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGG                                                                                               <  SRR4302541.6580401/94‑1 (MQ=60)

 TCAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGG                                                                                              <  SRR4302541.6205965/94‑1 (MQ=60)

 TCAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGG                                                                                              <  SRR4302541.6218207/94‑1 (MQ=60)

 TCAGTTGACGTTACTGGATA‑CCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGG                                                                                             <  SRR4302541.3252119/94‑1 (MQ=60)

  CAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGG                                                                                             >  SRR4302541.453268/1‑94 (MQ=60)

  CAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGG                                                                                             <  SRR4302541.5397878/94‑1 (MQ=60)

  CAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGG                                                                                             <  SRR4302541.2296447/94‑1 (MQ=60)

  CAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGG                                                                                             <  SRR4302541.6555259/94‑1 (MQ=60)

  CAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGG                                                                                             <  SRR4302541.659910/94‑1 (MQ=60)

  CAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGG                                                                                             <  SRR4302541.7241425/94‑1 (MQ=60)

  CAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGG                                                                                             <  SRR4302541.778483/94‑1 (MQ=60)

      TGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACT                                                                                         <  SRR4302541.7491901/94‑1 (MQ=60)

      TGACGTGACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCGTAACCAGCAGCTGTCACTCGCCTCGGGGGTACT                                                                                         >  SRR4302541.7923623/1‑94 (MQ=60)

       GACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTG                                                                                        <  SRR4302541.1013682/94‑1 (MQ=60)

        ACGTTACTGGATCCCCCCAGGCCAAAGGAAGCCGGGCAACCGCATGTGCAAAAAATGATTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGG                                                                                       <  SRR4302541.2049991/94‑1 (MQ=60)

        ACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGG                                                                                       <  SRR4302541.4628608/94‑1 (MQ=60)

        ACGTGACTGGATACCCCCGGGCCAAATGAAGCCGTGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGG                                                                                       <  SRR4302541.8219580/94‑1 (MQ=60)

          GTTACTGGATACCCCCGGGCCAACTGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCG                                                                                     <  SRR4302541.7603421/94‑1 (MQ=60)

          GTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCG                                                                                     <  SRR4302541.4786196/94‑1 (MQ=60)

          GTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCG                                                                                     >  SRR4302541.8797199/1‑94 (MQ=60)

           TTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGG                                                                                    <  SRR4302541.3721577/94‑1 (MQ=60)

           TTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGG                                                                                    <  SRR4302541.4313706/94‑1 (MQ=60)

           TTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGG                                                                                    <  SRR4302541.1289980/94‑1 (MQ=60)

            TACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGT                                                                                   <  SRR4302541.3155682/94‑1 (MQ=60)

            TACTGGATACCCCCGGGACAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGT                                                                                   <  SRR4302541.4436606/94‑1 (MQ=60)

             ACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTG                                                                                  <  SRR4302541.3706081/94‑1 (MQ=60)

             ACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTG                                                                                  <  SRR4302541.5737146/94‑1 (MQ=60)

             ACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTG                                                                                  >  SRR4302541.3021866/1‑94 (MQ=60)

             ACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTG                                                                                  >  SRR4302541.3200777/1‑94 (MQ=60)

              CTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGC                                                                                 >  SRR4302541.2000422/1‑94 (MQ=60)

              CTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGC                                                                                 <  SRR4302541.1115235/94‑1 (MQ=60)

              CTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGC                                                                                 <  SRR4302541.6446631/94‑1 (MQ=60)

               TGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCT                                                                                <  SRR4302541.2913352/94‑1 (MQ=60)

               TGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCT                                                                                <  SRR4302541.913388/94‑1 (MQ=60)

                GGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTG                                                                               >  SRR4302541.3696014/1‑94 (MQ=60)

                 GATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGG                                                                              >  SRR4302541.5136993/1‑94 (MQ=60)

                  ATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGA                                                                             >  SRR4302541.8701694/1‑94 (MQ=60)

                    ACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGGGCTGGATT                                                                           >  SRR4302541.418776/1‑94 (MQ=60)

                      CCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTAT                                                                         >  SRR4302541.8393177/1‑94 (MQ=60)

                      CCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTAT                                                                         >  SRR4302541.850381/1‑94 (MQ=60)

                      CCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTAT                                                                         >  SRR4302541.3431918/1‑94 (MQ=60)

                      CCCCGAGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTAT                                                                         <  SRR4302541.796403/94‑1 (MQ=60)

                       CCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATA                                                                        <  SRR4302541.5690984/94‑1 (MQ=60)

                        CCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATAC                                                                       >  SRR4302541.5917647/1‑94 (MQ=60)

                        CCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATAC                                                                       <  SRR4302541.227231/94‑1 (MQ=60)

                          GGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGC                                                                     >  SRR4302541.978762/1‑94 (MQ=60)

                          GGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGC                                                                     <  SRR4302541.5394039/94‑1 (MQ=60)

                          GGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGC                                                                     <  SRR4302541.5394040/94‑1 (MQ=60)

                           GGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCA                                                                    <  SRR4302541.662296/94‑1 (MQ=60)

                           GGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCA                                                                    >  SRR4302541.8093617/1‑94 (MQ=60)

                           GGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCA                                                                    <  SRR4302541.2674540/94‑1 (MQ=60)

                            GCCAAATGAAGCCGGGCAACCGCCTCTGCAAAAAATGCTTAACCAGCAGCTGCCCCGCGCCTCGGGGGTACTGGCGGTGCTGGgttgaccgcac                                                                   >  SRR4302541.1963211/1‑83 (MQ=60)

                            GCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAA                                                                   >  SRR4302541.6702857/1‑94 (MQ=60)

                             CCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAAC                                                                  <  SRR4302541.8335520/94‑1 (MQ=60)

                             CAAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAAC                                                                  <  SRR4302541.6472030/94‑1 (MQ=60)

                              CAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACT                                                                 <  SRR4302541.486378/94‑1 (MQ=60)

                              CAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACCCAACT                                                                 >  SRR4302541.6814009/1‑94 (MQ=60)

                              CAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCAGGGGAACTGGCGGTGCTGGATTATACGCATCT                                                                 >  SRR4302541.1109160/1‑94 (MQ=60)

                               AAATGAAGCCGGTCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTG                                                                <  SRR4302541.7083225/94‑1 (MQ=60)

                               AAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTG                                                                <  SRR4302541.4843006/94‑1 (MQ=60)

                               AAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTG                                                                >  SRR4302541.1234824/1‑94 (MQ=60)

                               AAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTG                                                                <  SRR4302541.3609717/94‑1 (MQ=60)

                                AATGAAGCCGGGCAACCGCATCTGCAAAAAATCCTT‑ACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAA                                                              <  SRR4302541.3061753/94‑1 (MQ=60)

                                 ATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAA                                                              <  SRR4302541.7647559/94‑1 (MQ=60)

                                  TGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAA                                                             <  SRR4302541.6311698/94‑1 (MQ=60)

                                   GAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAAT                                                            >  SRR4302541.6815312/1‑94 (MQ=60)

                                   GAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAAT                                                            <  SRR4302541.6122281/94‑1 (MQ=60)

                                     AGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCG                                                          <  SRR4302541.8075799/94‑1 (MQ=60)

                                     AGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCG                                                          <  SRR4302541.7746688/94‑1 (MQ=60)

                                     AGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCG                                                          >  SRR4302541.7625169/1‑94 (MQ=60)

                                     AGCCAGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCG                                                          <  SRR4302541.1414202/94‑1 (MQ=60)

                                      GCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGA                                                         <  SRR4302541.5345564/94‑1 (MQ=60)

                                        CGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATC                                                       >  SRR4302541.4017684/1‑94 (MQ=60)

                                        CGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATC                                                       <  SRR4302541.4146187/94‑1 (MQ=60)

                                        CGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATC                                                       <  SRR4302541.4146186/94‑1 (MQ=60)

                                        CGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATC                                                       >  SRR4302541.4061706/1‑94 (MQ=60)

                                        CGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATC                                                       >  SRR4302541.1984340/1‑94 (MQ=60)

                                         GGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCT                                                      >  SRR4302541.2041707/1‑94 (MQ=60)

                                         GGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCT                                                      <  SRR4302541.1853892/94‑1 (MQ=60)

                                         GGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCT                                                      <  SRR4302541.6949101/94‑1 (MQ=60)

                                         GGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCT                                                      <  SRR4302541.7182560/94‑1 (MQ=60)

                                         GGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCT                                                      >  SRR4302541.1863422/1‑94 (MQ=60)

                                         GGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCT                                                      <  SRR4302541.136707/94‑1 (MQ=60)

                                         GGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCT                                                      <  SRR4302541.982416/94‑1 (MQ=60)

                                          gccacccgcttcgGCAAAAAATCCCTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTC                                                     <  SRR4302541.1790023/81‑1 (MQ=60)

                                           GCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCC                                                    >  SRR4302541.2722370/1‑94 (MQ=60)

                                            CAACCGCGTCTGCAAAAAATGCTGAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCG                                                   <  SRR4302541.8722059/94‑1 (MQ=60)

                                            CAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCG                                                   <  SRR4302541.7271325/94‑1 (MQ=60)

                                            CAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCG                                                   >  SRR4302541.8161591/1‑94 (MQ=60)

                                            CAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCG                                                   <  SRR4302541.6839792/94‑1 (MQ=60)

                                             AACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGA                                                  >  SRR4302541.8456018/1‑94 (MQ=60)

                                              ACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGTGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGAT                                                 <  SRR4302541.6164733/94‑1 (MQ=60)

                                              ACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCTATCTCCGAT                                                 >  SRR4302541.5523373/1‑94 (MQ=60)

                                              ACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGAT                                                 <  SRR4302541.5387655/94‑1 (MQ=60)

                                              ACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGAT                                                 <  SRR4302541.5387654/94‑1 (MQ=60)

                                              ACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGAT                                                 >  SRR4302541.3953594/1‑94 (MQ=60)

                                               CCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATG                                                >  SRR4302541.5054854/1‑94 (MQ=60)

                                               CCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATG                                                <  SRR4302541.5789112/94‑1 (MQ=60)

                                                 GCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGCTGAA                                              >  SRR4302541.2731836/1‑94 (MQ=60)

                                                 GCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAA                                              >  SRR4302541.3637964/1‑94 (MQ=60)

                                                  CATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAG                                             >  SRR4302541.5873979/1‑94 (MQ=60)

                                                  CATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAG                                             <  SRR4302541.6947061/94‑1 (MQ=60)

                                                  CATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAG                                             <  SRR4302541.8393388/94‑1 (MQ=60)

                                                   ATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGG                                            >  SRR4302541.1963459/1‑94 (MQ=60)

                                                   ATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGG                                            >  SRR4302541.7243604/1‑94 (MQ=60)

                                                   ATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGA                                            >  SRR4302541.6409894/1‑94 (MQ=60)

                                                   ATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGA                                            >  SRR4302541.1655395/1‑94 (MQ=60)

                                                    TCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAG                                           <  SRR4302541.5632474/94‑1 (MQ=60)

                                                      TGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGT                                         <  SRR4302541.3517401/94‑1 (MQ=60)

                                                      TGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGT                                         >  SRR4302541.2796489/1‑94 (MQ=60)

                                                       GCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTC                                        <  SRR4302541.6496893/94‑1 (MQ=60)

                                                        CAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCC                                       >  SRR4302541.5110094/1‑94 (MQ=60)

                                                        CAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGGGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGCGGTCC                                       >  SRR4302541.7959470/1‑94 (MQ=60)

                                                         AAAAAATGCTTAACCAGCAGCGGGCACGCGCCTCGGGGGTACTGGCGGGGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCG                                      <  SRR4302541.379756/94‑1 (MQ=60)

                                                           AAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTG                                    <  SRR4302541.1828766/94‑1 (MQ=60)

                                                            AAATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGG                                   >  SRR4302541.7460831/1‑94 (MQ=60)

                                                             AATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAG                                  >  SRR4302541.802492/1‑94 (MQ=60)

                                                             AATGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATAGATCTCCGATGAAGAGGTCCGTGAG                                  <  SRR4302541.1581918/94‑1 (MQ=60)

                                                               TGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGC                                <  SRR4302541.3511967/94‑1 (MQ=60)

                                                               AGCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGC                                <  SRR4302541.3506431/94‑1 (MQ=60)

                                                                GCTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCG                               <  SRR4302541.8836011/94‑1 (MQ=60)

                                                                GCTTAACCAGCAGCTGGCACGCGCCTCGGGCGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCG                               <  SRR4302541.7556830/94‑1 (MQ=60)

                                                                 gttatCCAGCAGGTGGCACGCGCGTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGA                              <  SRR4302541.563873/89‑1 (MQ=60)

                                                                 CTTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGACCCGTGGGGCGA                              >  SRR4302541.4672545/1‑94 (MQ=60)

                                                                  TTAACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAAACGATCTCCGATGAAGAGGTCCGTGAGGCGAT                             >  SRR4302541.75762/1‑94 (MQ=60)

                                                                    AACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTT                           <  SRR4302541.5582577/94‑1 (MQ=60)

                                                                    AACCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTT                           >  SRR4302541.1590332/1‑94 (MQ=60)

                                                                    AACCAGCACCTGGCACGCGCCTCGGGGGTACTGGGACTGCTGGATTATACGCTACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTT                           <  SRR4302541.1325607/94‑1 (MQ=60)

                                                                      CCAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTG                         <  SRR4302541.2359053/94‑1 (MQ=60)

                                                                       CAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGG                        <  SRR4302541.8820198/94‑1 (MQ=60)

                                                                       CAGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGG                        >  SRR4302541.8172555/1‑94 (MQ=60)

                                                                       CAGCAGCCGGCACGCGCCTCGGGGGTACTGGCGGTGCTTGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGG                        <  SRR4302541.6663079/94‑1 (MQ=60)

                                                                        AGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGC                       <  SRR4302541.2527327/94‑1 (MQ=60)

                                                                        AGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGC                       <  SRR4302541.4157953/94‑1 (MQ=60)

                                                                        AGCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGC                       <  SRR4302541.7409070/94‑1 (MQ=60)

                                                                        AGCAGCTGGCACGCGCATCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGC                       <  SRR4302541.7409071/94‑1 (MQ=60)

                                                                         GCAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCG                      >  SRR4302541.5410615/1‑94 (MQ=60)

                                                                          CAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGG                     >  SRR4302541.1623808/1‑94 (MQ=60)

                                                                          CAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGG                     >  SRR4302541.6860478/1‑94 (MQ=60)

                                                                          CAGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATATCCGATGAAGAGGTCCGTGAGGCGAGTTTGGGGG                     >  SRR4302541.6672181/1‑94 (MQ=60)

                                                                           AGCTGGCCCGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGGAATCGATCTCCGATTACGAGGTCCGTGAGGGGATTTTCGCGGG                    >  SRR4302541.5886090/1‑94 (MQ=60)

                                                                           AGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGG                    >  SRR4302541.3372381/1‑94 (MQ=60)

                                                                           AGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGG                    >  SRR4302541.2264204/1‑94 (MQ=60)

                                                                           AGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGG                    >  SRR4302541.5886091/1‑94 (MQ=60)

                                                                           AGCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGG                    >  SRR4302541.787710/1‑94 (MQ=60)

                                                                            GCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTG                   <  SRR4302541.7298399/94‑1 (MQ=60)

                                                                            GCTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTG                   >  SRR4302541.8472365/1‑94 (MQ=60)

                                                                             GTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGG                  <  SRR4302541.7731711/94‑1 (MQ=60)

                                                                             CTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGG                  <  SRR4302541.1593635/94‑1 (MQ=60)

                                                                             CTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGG                  <  SRR4302541.6940865/94‑1 (MQ=60)

                                                                             CTGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTACGTGAGGCGATTTTGGCGGTGG                  <  SRR4302541.1531816/94‑1 (MQ=60)

                                                                              TGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGG                 >  SRR4302541.4807317/1‑94 (MQ=60)

                                                                              TGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGG                 >  SRR4302541.4167160/1‑94 (MQ=60)

                                                                              TGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGG                 >  SRR4302541.260219/1‑94 (MQ=60)

                                                                              TGGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGG                 >  SRR4302541.5200782/1‑94 (MQ=60)

                                                                               GGCACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGG                <  SRR4302541.6870221/94‑1 (MQ=60)

                                                                                 CACGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCA              >  SRR4302541.6929747/1‑94 (MQ=60)

                                                                                   CGCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAAT            <  SRR4302541.2289868/94‑1 (MQ=60)

                                                                                    GCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATC           <  SRR4302541.4749316/94‑1 (MQ=60)

                                                                                    GCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATC           <  SRR4302541.5227921/94‑1 (MQ=60)

                                                                                    GCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATC           <  SRR4302541.6901923/94‑1 (MQ=60)

                                                                                    CCGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATC           <  SRR4302541.113961/94‑1 (MQ=60)

                                                                                     CGCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCG          <  SRR4302541.2414338/94‑1 (MQ=60)

                                                                                      GCCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGG         >  SRR4302541.880196/1‑94 (MQ=60)

                                                                                       CCTCGGGGTTGCTGGCGGTGCTGGATTCTACGCAATTGAAATCCATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGT        <  SRR4302541.3021362/94‑1 (MQ=60)

                                                                                       CCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGT        <  SRR4302541.948819/94‑1 (MQ=60)

                                                                                       CCTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGT        <  SRR4302541.7163228/94‑1 (MQ=60)

                                                                                        CTCGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTG       >  SRR4302541.7750531/1‑94 (MQ=60)

                                                                                          CGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAATAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCC     <  SRR4302541.159096/94‑1 (MQ=60)

                                                                                          CGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCC     <  SRR4302541.7052875/94‑1 (MQ=60)

                                                                                          CGGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCC     <  SRR4302541.942017/94‑1 (MQ=60)

                                                                                           GGGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCG    >  SRR4302541.7004681/1‑94 (MQ=60)

                                                                                            GGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGC   >  SRR4302541.4322916/1‑94 (MQ=60)

                                                                                            GGGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGC   >  SRR4302541.5030894/1‑94 (MQ=60)

                                                                                             GGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGCT  >  SRR4302541.2570167/1‑94 (MQ=60)

                                                                                             GGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGCT  >  SRR4302541.5271821/1‑94 (MQ=60)

                                                                                             GGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGCT  >  SRR4302541.6968303/1‑94 (MQ=60)

                                                                                             GGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGCT  <  SRR4302541.4132499/94‑1 (MQ=60)

GTCAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGCGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGCT  >  NC_000913/4325401‑4325587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`