Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,334,019 A→G L197L (CTT→CTC)  yjdE ← putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,334,0190AG99.1% 1119.8 / ‑1.4 331L197L (CTT→CTC) yjdEputative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base A (2/1);  new base G (180/148);  total (182/149)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01

Only 100 of 344 total aligned reads displayed.

GGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTAAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAA  >  NC_000913/4333929‑4334108
                                                                                          |                                                                                         
 gCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAgg                                                                                        <  2:3123533/93‑1 (MQ=255)
  cGATAGGGACATTGCGTTTCGGGTTTTTCACCACGCCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAggt                                                                                       <  2:307805/93‑2 (MQ=255)
   gATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGt                                                                                      >  1:1857309/1‑93 (MQ=255)
   gATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGAACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGt                                                                                      >  1:4654197/1‑93 (MQ=255)
    aTAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTa                                                                                     >  2:7857844/1‑93 (MQ=255)
       gggACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACtt                                                                                  >  2:2363224/1‑93 (MQ=255)
        ggACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACttt                                                                                 <  2:1985687/93‑1 (MQ=255)
        ggACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACttt                                                                                 >  1:2985480/1‑93 (MQ=255)
           cATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGaa                                                                              >  2:2806365/1‑93 (MQ=255)
           cATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGaa                                                                              >  2:5643371/1‑93 (MQ=255)
             ttGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCTTAACGTTGAGGGTACTTTGAAtt                                                                            >  2:4777628/1‑93 (MQ=255)
             ttGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAAtt                                                                            <  1:1613178/93‑1 (MQ=255)
             ttGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAAtt                                                                            >  1:7755051/1‑93 (MQ=255)
              tGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTg                                                                           <  1:2609419/93‑1 (MQ=255)
                cGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCa                                                                         <  2:353813/93‑1 (MQ=255)
                 gTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCAc                                                                        <  1:4114649/93‑1 (MQ=255)
                 gTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCAc                                                                        >  2:2207228/1‑93 (MQ=255)
                  tttCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCAcc                                                                       <  1:4520379/93‑1 (MQ=255)
                    tCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGa                                                                     <  2:4973137/93‑1 (MQ=255)
                    tCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGGACTTTGAATTGCACCGa                                                                     >  2:5693881/1‑93 (MQ=255)
                     cGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGaa                                                                    <  1:3672430/93‑1 (MQ=255)
                      gggTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAg                                                                   <  1:6573451/93‑1 (MQ=255)
                       ggTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAgg                                                                  <  1:8633989/93‑1 (MQ=255)
                       ggTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAgg                                                                  <  1:7834264/93‑1 (MQ=255)
                       ggTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAgg                                                                  >  1:7672783/1‑93 (MQ=255)
                       ggTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAgg                                                                  <  1:4317296/93‑1 (MQ=255)
                         tttttCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTg                                                                <  2:6433344/93‑1 (MQ=255)
                         tttttCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTg                                                                <  2:8125617/93‑1 (MQ=255)
                         tttttCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGGACTTTGAATTGCACCGAAGGTg                                                                >  2:6656420/1‑93 (MQ=255)
                           tttCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGcc                                                              <  2:5128511/93‑1 (MQ=255)
                             tCACCACCCCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCa                                                            <  2:1048199/93‑1 (MQ=255)
                              ccccacACCTGGTGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAg                                                           <  2:6975913/91‑1 (MQ=255)
                              caccacACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAg                                                           <  2:4620479/93‑1 (MQ=255)
                               accacACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAgg                                                          >  1:122452/1‑93 (MQ=255)
                               accacACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAgg                                                          >  2:1423252/1‑93 (MQ=255)
                               accacACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAgg                                                          >  2:8575428/1‑93 (MQ=255)
                               accacACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAgg                                                          >  1:2768691/1‑93 (MQ=255)
                               accacACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGCTGCCCAgc                                                          >  2:7518684/1‑92 (MQ=255)
                                ccacACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGc                                                         <  1:6834610/93‑1 (MQ=255)
                                ccacACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGc                                                         >  2:3722058/1‑93 (MQ=255)
                                 cacaCCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGcc                                                        <  2:5431372/93‑1 (MQ=255)
                                 cacaCCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGcc                                                        <  1:3995574/93‑1 (MQ=255)
                                   catcTGCGGCAACGGAGGCCCTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTGTGAAGTGCACCGAAGGTGCCCAGGCCGc                                                      <  2:2848521/90‑1 (MQ=255)
                                   cacCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGc                                                      <  1:519467/93‑1 (MQ=255)
                                   cacCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGc                                                      <  1:4248178/93‑1 (MQ=255)
                                    acCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCt                                                     >  1:8350587/1‑93 (MQ=255)
                                     ccTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTg                                                    >  2:6499925/1‑93 (MQ=255)
                                      cTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGa                                                   <  1:8149424/93‑1 (MQ=255)
                                      cTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGa                                                   <  2:4718833/93‑1 (MQ=255)
                                      cTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGa                                                   >  1:131885/1‑93 (MQ=255)
                                        gCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACg                                                 >  2:7562030/1‑93 (MQ=255)
                                           gCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTc                                              >  2:4429428/1‑93 (MQ=255)
                                           gCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTc                                              >  2:6282274/1‑93 (MQ=255)
                                           gCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTc                                              >  1:3214280/1‑93 (MQ=255)
                                           gCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTc                                              >  2:7726956/1‑93 (MQ=255)
                                           gCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTAAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTc                                              >  1:6165115/1‑93 (MQ=255)
                                            cAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTcc                                             <  1:7378769/93‑1 (MQ=255)
                                             aaCGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCa                                            <  2:869657/93‑1 (MQ=255)
                                              aCGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCAt                                           >  1:5617314/1‑93 (MQ=255)
                                              aCGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCAt                                           >  2:7225212/1‑93 (MQ=255)
                                                 gAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATgcc                                        <  2:5200916/93‑1 (MQ=255)
                                                  aGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATgccg                                       >  2:4134374/1‑93 (MQ=255)
                                                  aGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATgccg                                       >  2:7458752/1‑93 (MQ=255)
                                                     cACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCa                                    >  1:969666/1‑93 (MQ=255)
                                                        tttCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCatat                                 <  1:6365753/93‑1 (MQ=255)
                                                        tttCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCatat                                 <  1:5030316/93‑1 (MQ=255)
                                                        tttCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCAGCTGACGTTCCATGCCGCCatat                                 >  1:3624935/1‑93 (MQ=255)
                                                           ccACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCCCCCTATAgg                              >  1:2090155/1‑93 (MQ=255)
                                                             acacCGATGAACGACCACAGCGTAACGTTGAGGGGACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTGCCATGCCGCCATATAGGtt                            >  1:2468195/1‑93 (MQ=255)
                                                              cacCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGttt                           >  1:8046047/1‑93 (MQ=255)
                                                              cacCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGttt                           >  2:6872260/1‑93 (MQ=255)
                                                               acCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCGTATAGGTTTc                          >  1:5880687/1‑93 (MQ=255)
                                                               acCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTc                          <  2:4851517/93‑1 (MQ=255)
                                                               acCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTc                          <  2:6476543/93‑1 (MQ=255)
                                                                 cGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTcac                        >  1:55169/1‑93 (MQ=255)
                                                                   aTGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTcacca                      >  1:1063113/1‑93 (MQ=255)
                                                                    tGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTcaccac                     >  2:2509398/1‑93 (MQ=255)
                                                                    tGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTcaccac                     >  2:8297014/1‑93 (MQ=255)
                                                                     gAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACg                    <  1:57582/93‑1 (MQ=255)
                                                                         gACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaac                <  2:6699449/93‑1 (MQ=255)
                                                                          gccACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaacc               <  1:7892147/92‑1 (MQ=255)
                                                                          aCCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaacc               >  1:6666042/1‑93 (MQ=255)
                                                                           ccACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaacca              <  1:5231057/93‑1 (MQ=255)
                                                                           ccACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGGTCCATGCCGCCATATAGGTTTCACCACGgaacca              >  1:7154981/1‑93 (MQ=255)
                                                                            cacaGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaaccag             >  2:1271493/1‑93 (MQ=255)
                                                                            cacaGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaaccag             >  2:3889443/1‑93 (MQ=255)
                                                                             acaGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaaccaga            >  2:2728616/1‑93 (MQ=255)
                                                                              gagggTAACTTTGGGGGTACTTTGAATGGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaaccagaa           <  2:1558220/89‑1 (MQ=255)
                                                                              caGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaaccagaa           >  2:2457135/1‑93 (MQ=255)
                                                                               aGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaaccagaac          <  2:2067540/93‑1 (MQ=255)
                                                                                gCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaaccagaacc         >  2:1469740/1‑93 (MQ=255)
                                                                                 cGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGgaaccagaacca        <  1:3014578/93‑1 (MQ=255)
                                                                                  gTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGaaccagaaccag       <  2:5823382/93‑1 (MQ=255)
                                                                                   tAACGTTAAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGc      >  1:8218031/1‑93 (MQ=255)
                                                                                     aCGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCa    >  2:7639299/1‑93 (MQ=255)
                                                                                     aCGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCa    >  1:1652277/1‑93 (MQ=255)
                                                                                      cGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCTCCATATAGGTTTCACCACGGAACCAGAACCAGCCaa   <  2:1203011/93‑1 (MQ=255)
                                                                                      cGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCaa   >  1:5135345/1‑93 (MQ=255)
                                                                                       gTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCaaa  >  1:6971368/1‑93 (MQ=255)
                                                                                       gTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCaaa  <  2:4077468/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTAAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAA  >  NC_000913/4333929‑4334108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGTGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTAAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAATAC  >  NC_000913/4333926‑4334111
                                                                                             |                                                                                            
GGTGGCGATAGGGACATTGCGTTTCGGTTTTTTCACCACCCCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTG                                                                                              <  SRR4302541.8279645/94‑1 (MQ=60)
GGTGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTG                                                                                              >  SRR4302541.7031893/1‑94 (MQ=60)
 GTGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGA                                                                                             <  SRR4302541.2484794/94‑1 (MQ=60)
  GGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAG                                                                                            <  SRR4302541.1750282/94‑1 (MQ=60)
     CGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGT                                                                                         >  SRR4302541.947272/1‑94 (MQ=60)
     CGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGT                                                                                         >  SRR4302541.1875233/1‑94 (MQ=60)
     CGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGT                                                                                         <  SRR4302541.7845059/94‑1 (MQ=60)
     CGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGACGAACGACCACAGCGTAACGTTGAGGGT                                                                                         <  SRR4302541.1844316/94‑1 (MQ=60)
     CGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGAACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGT                                                                                         >  SRR4302541.4701586/1‑94 (MQ=60)
      GATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTA                                                                                        <  SRR4302541.6729530/94‑1 (MQ=60)
      GATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTA                                                                                        >  SRR4302541.6940664/1‑94 (MQ=60)
       ATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTAT                                                                                       >  SRR4302541.2965741/1‑94 (MQ=60)
       ATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTAC                                                                                       >  SRR4302541.3673805/1‑94 (MQ=60)
       ATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTAC                                                                                       <  SRR4302541.6345526/94‑1 (MQ=60)
       ATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTAC                                                                                       >  SRR4302541.6950776/1‑94 (MQ=60)
        TAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACT                                                                                      <  SRR4302541.8616852/94‑1 (MQ=60)
          GGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTT                                                                                    <  SRR4302541.8261250/94‑1 (MQ=60)
          GGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTT                                                                                    >  SRR4302541.3015607/1‑94 (MQ=60)
           GGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTG                                                                                   >  SRR4302541.1745699/1‑94 (MQ=60)
           GGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTG                                                                                   <  SRR4302541.5268655/94‑1 (MQ=60)
              CATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACCCCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAAT                                                                                <  SRR4302541.810025/94‑1 (MQ=60)
              CATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAAT                                                                                >  SRR4302541.8213795/1‑94 (MQ=60)
               ATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATT                                                                               <  SRR4302541.7769264/94‑1 (MQ=60)
               ATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATT                                                                               >  SRR4302541.4559704/1‑94 (MQ=60)
               ATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATT                                                                               >  SRR4302541.7837552/1‑94 (MQ=60)
                TTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTG                                                                              <  SRR4302541.2353294/94‑1 (MQ=60)
                TTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTG                                                                              <  SRR4302541.1629205/94‑1 (MQ=60)
                 TGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGC                                                                             <  SRR4302541.2635513/94‑1 (MQ=60)
                  GCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCA                                                                            >  SRR4302541.5052729/1‑94 (MQ=60)
                   CGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGAAC                                                                           >  SRR4302541.1547442/1‑94 (MQ=60)
                    GTTTCGGGTTTTTCGCCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACC                                                                          >  SRR4302541.3247031/1‑94 (MQ=60)
                    GTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACC                                                                          >  SRR4302541.5233371/1‑94 (MQ=60)
                    GTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACC                                                                          >  SRR4302541.5233372/1‑94 (MQ=60)
                    GTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACC                                                                          >  SRR4302541.7113269/1‑94 (MQ=60)
                    GTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACC                                                                          <  SRR4302541.4155291/94‑1 (MQ=60)
                    GTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACC                                                                          <  SRR4302541.4155290/94‑1 (MQ=60)
                     TTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTTAATTGCACCG                                                                         >  SRR4302541.6715282/1‑94 (MQ=60)
                     TTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCG                                                                         <  SRR4302541.4566000/94‑1 (MQ=60)
                     TTTCGGGCTTTTCACCACACCTGCGGCAACGGAAGCACTTTCCACACTGATGAACGACCACAGCGTAACGATGACGATACTTTGAATTGCAaca                                                                         >  SRR4302541.8822387/1‑91 (MQ=60)
                      TTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGA                                                                        >  SRR4302541.3676350/1‑94 (MQ=60)
                      TTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGA                                                                        <  SRR4302541.6394704/94‑1 (MQ=60)
                      TTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGA                                                                        >  SRR4302541.991200/1‑94 (MQ=60)
                        CGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAG                                                                      <  SRR4302541.7845732/94‑1 (MQ=60)
                        CGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAG                                                                      <  SRR4302541.3709659/94‑1 (MQ=60)
                         GGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCTAAGG                                                                     >  SRR4302541.4581754/1‑94 (MQ=60)
                         GGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGG                                                                     >  SRR4302541.6846521/1‑94 (MQ=60)
                         GGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGG                                                                     >  SRR4302541.7754373/1‑94 (MQ=60)
                         GGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGG                                                                     <  SRR4302541.6640706/94‑1 (MQ=60)
                         GGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGG                                                                     <  SRR4302541.4316435/94‑1 (MQ=60)
                          GGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGT                                                                    >  SRR4302541.3038284/1‑94 (MQ=60)
                          GGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGT                                                                    <  SRR4302541.8726495/94‑1 (MQ=60)
                          GGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGT                                                                    <  SRR4302541.4360404/94‑1 (MQ=60)
                          GGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGT                                                                    <  SRR4302541.7919650/94‑1 (MQ=60)
                           GTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTG                                                                   <  SRR4302541.6036307/94‑1 (MQ=60)
                           GTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTG                                                                   >  SRR4302541.8131351/1‑94 (MQ=60)
                            TTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGC                                                                  <  SRR4302541.8372314/94‑1 (MQ=60)
                            TTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGC                                                                  <  SRR4302541.4142659/94‑1 (MQ=60)
                              TTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCC                                                                >  SRR4302541.588820/1‑94 (MQ=60)
                               TTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCG                                                               >  SRR4302541.5369612/1‑94 (MQ=60)
                                TCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAG                                                              <  SRR4302541.8816930/94‑1 (MQ=60)
                                 CACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGG                                                             >  SRR4302541.2796562/1‑94 (MQ=60)
                                 CACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGG                                                             >  SRR4302541.123426/1‑94 (MQ=60)
                                 CACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGG                                                             >  SRR4302541.3462993/1‑94 (MQ=60)
                                  ACCACACCCGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGC                                                            >  SRR4302541.2561883/1‑94 (MQ=60)
                                   CCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCC                                                           <  SRR4302541.6907736/94‑1 (MQ=60)
                                    CACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCG                                                          <  SRR4302541.2503154/94‑1 (MQ=60)
                                    CACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCG                                                          >  SRR4302541.7672752/1‑94 (MQ=60)
                                    CACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCG                                                          <  SRR4302541.5296399/94‑1 (MQ=60)
                                    CACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCG                                                          <  SRR4302541.5739277/94‑1 (MQ=60)
                                    CACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCG                                                          >  SRR4302541.3690949/1‑94 (MQ=60)
                                    CACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCG                                                          <  SRR4302541.4035138/94‑1 (MQ=60)
                                     ACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGC                                                         >  SRR4302541.1636679/1‑94 (MQ=60)
                                     ACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGC                                                         >  SRR4302541.1099627/1‑94 (MQ=60)
                                     ACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGC                                                         >  SRR4302541.7143024/1‑94 (MQ=60)
                                      CACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCT                                                        <  SRR4302541.4290617/94‑1 (MQ=60)
                                      CACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCT                                                        >  SRR4302541.8441215/1‑94 (MQ=60)
                                      CACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCT                                                        >  SRR4302541.5799635/1‑94 (MQ=60)
                                      CACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCT                                                        <  SRR4302541.524321/94‑1 (MQ=60)
                                       ACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTG                                                       >  SRR4302541.4132989/1‑94 (MQ=60)
                                        CCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGA                                                      >  SRR4302541.132921/1‑94 (MQ=60)
                                         CTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGAC                                                     <  SRR4302541.6462035/94‑1 (MQ=60)
                                         CTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGAC                                                     <  SRR4302541.4039750/94‑1 (MQ=60)
                                         CTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGAC                                                     <  SRR4302541.8238523/94‑1 (MQ=60)
                                         CTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTCGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGAC                                                     <  SRR4302541.2789679/94‑1 (MQ=60)
                                           GCGGCAACGGAGACACTGTCCACACCGATGAACGCCCACAGGTTAACGTGGAGGGTACTTTAAATTGCACCGAAGGTGCCCAGGCCGCTGACGT                                                   <  SRR4302541.6270058/94‑1 (MQ=60)
                                            CGGCAACGGAGGCACTTTCCACACCGATGAACTACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTT                                                  <  SRR4302541.1290309/94‑1 (MQ=60)
                                            CGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTT                                                  <  SRR4302541.6804475/94‑1 (MQ=60)
                                            CGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTC                                                  >  SRR4302541.851433/1‑94 (MQ=60)
                                             GGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTC                                                 >  SRR4302541.7295793/1‑94 (MQ=60)
                                             GGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTC                                                 >  SRR4302541.3246753/1‑94 (MQ=60)
                                             GGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTAAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTC                                                 >  SRR4302541.6228112/1‑94 (MQ=60)
                                               CAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCA                                               <  SRR4302541.7457638/94‑1 (MQ=60)
                                                AACGGATGCACTTTCCACACCGATGAACGCCCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCAT                                              <  SRR4302541.31415/94‑1 (MQ=60)
                                                AACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCAT                                              >  SRR4302541.5674801/1‑94 (MQ=60)
                                                AACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCAT                                              <  SRR4302541.8268206/94‑1 (MQ=60)
                                                AACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCAT                                              <  SRR4302541.2158013/94‑1 (MQ=60)
                                                 ACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATG                                             >  SRR4302541.5456137/1‑94 (MQ=60)
                                                 ACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATG                                             <  SRR4302541.1705317/94‑1 (MQ=60)
                                                 ACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATG                                             <  SRR4302541.4697112/94‑1 (MQ=60)
                                                  CGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGC                                            <  SRR4302541.515566/94‑1 (MQ=60)
                                                   GGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCC                                           >  SRR4302541.238624/1‑94 (MQ=60)
                                                    GAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCG                                          <  SRR4302541.436419/94‑1 (MQ=60)
                                                    GAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCG                                          >  SRR4302541.1361678/1‑94 (MQ=60)
                                                     AGGCACTTTCCACACCGATGAAAGACCACAGCGTAACGTTGCGGGTACTTTGAATTGCACCGAAGGCGCCAAGGCCGCTGACGTTCCATGACGC                                         >  SRR4302541.371235/1‑94 (MQ=60)
                                                      GGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCC                                        >  SRR4302541.1369332/1‑94 (MQ=60)
                                                       GCACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCA                                       >  SRR4302541.978774/1‑94 (MQ=60)
                                                         CCTTTCCACACCGATTAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATA                                     <  SRR4302541.2955361/94‑1 (MQ=60)
                                                         ACTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATA                                     >  SRR4302541.8029860/1‑94 (MQ=60)
                                                          CTTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCAGCTGACGTTCCATGCCGCCATAT                                    >  SRR4302541.3661685/1‑94 (MQ=60)
                                                           TTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATA                                   <  SRR4302541.5082049/94‑1 (MQ=60)
                                                           TTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATA                                   <  SRR4302541.6430841/94‑1 (MQ=60)
                                                           TTTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATA                                   >  SRR4302541.5187614/1‑94 (MQ=60)
                                                            TTCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAG                                  <  SRR4302541.4862313/94‑1 (MQ=60)
                                                             TCCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCCCCCTATAGG                                 >  SRR4302541.2110404/1‑94 (MQ=60)
                                                              CCACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGT                                >  SRR4302541.1325080/1‑94 (MQ=60)
                                                               CACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTT                               <  SRR4302541.4851420/94‑1 (MQ=60)
                                                               CACACCGATGAACGACCACAGCGTAACGTTGAGGGGACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTGCCATGCCGCCATATAGGTT                               >  SRR4302541.2492870/1‑94 (MQ=60)
                                                                ACACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTT                              >  SRR4302541.8134525/1‑94 (MQ=60)
                                                                 CACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCGTATAGGTTTC                             >  SRR4302541.5940531/1‑94 (MQ=60)
                                                                  ACCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCA                            >  SRR4302541.1075238/1‑94 (MQ=60)
                                                                   CCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCGTGCCGCCATATAGGTTTCAC                           <  SRR4302541.5930030/94‑1 (MQ=60)
                                                                   CCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCAC                           <  SRR4302541.1895975/94‑1 (MQ=60)
                                                                   CCGATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCAC                           >  SRR4302541.55604/1‑94 (MQ=60)
                                                                     GATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCA                         >  SRR4302541.1072995/1‑94 (MQ=60)
                                                                     GATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCA                         >  SRR4302541.420258/1‑94 (MQ=60)
                                                                      ATGAACGACCACAGCGTAACGTTGCGGGTACTTTGAATTGCACCGAAGCTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCAG                        >  SRR4302541.2969889/1‑94 (MQ=60)
                                                                      ATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCAC                        >  SRR4302541.7758292/1‑94 (MQ=60)
                                                                      ATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCAC                        <  SRR4302541.5240559/94‑1 (MQ=60)
                                                                      ATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCAC                        >  SRR4302541.4471676/1‑94 (MQ=60)
                                                                      ATGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCAC                        <  SRR4302541.3224757/94‑1 (MQ=60)
                                                                       TGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACG                       >  SRR4302541.3836593/1‑94 (MQ=60)
                                                                       TGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACG                       >  SRR4302541.3080460/1‑94 (MQ=60)
                                                                       TGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACG                       >  SRR4302541.3036253/1‑94 (MQ=60)
                                                                       TGAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACG                       <  SRR4302541.2014108/94‑1 (MQ=60)
                                                                        GAACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGG                      <  SRR4302541.58041/94‑1 (MQ=60)
                                                                          ACGACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCAAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAA                    <  SRR4302541.7392051/94‑1 (MQ=60)
                                                                            GACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACC                  >  SRR4302541.8137985/1‑94 (MQ=60)
                                                                            GACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACC                  >  SRR4302541.6734456/1‑94 (MQ=60)
                                                                            GACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACC                  >  SRR4302541.6715137/1‑94 (MQ=60)
                                                                             GCCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCA                 <  SRR4302541.7978919/94‑1 (MQ=60)
                                                                             ACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCA                 >  SRR4302541.7231262/1‑94 (MQ=60)
                                                                             ACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCA                 <  SRR4302541.7978918/94‑1 (MQ=60)
                                                                             ACCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGGTCCATGCCGCCATATAGGTTTCACCACGGAACCA                 >  SRR4302541.7231263/1‑94 (MQ=60)
                                                                              CCACAGTGTGACGTTGAGGGGACTTTGAATGGCACCCAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAG                <  SRR4302541.5284953/94‑1 (MQ=60)
                                                                              CCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAG                <  SRR4302541.5284958/94‑1 (MQ=60)
                                                                              CCACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAG                >  SRR4302541.5842214/1‑94 (MQ=60)
                                                                              CCACAGCGCAACATTGGGGGCACTTTGAATTGCACCGAAGGTGACCAGCCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAG                <  SRR4302541.6555921/94‑1 (MQ=60)
                                                                               CACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGA               <  SRR4302541.6288762/94‑1 (MQ=60)
                                                                                ACAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAA              <  SRR4302541.8390334/94‑1 (MQ=60)
                                                                                 CAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAAC             >  SRR4302541.7528566/1‑94 (MQ=60)
                                                                                 CAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAAC             >  SRR4302541.5603974/1‑94 (MQ=60)
                                                                                 CAGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAAC             >  SRR4302541.5603975/1‑94 (MQ=60)
                                                                                  AGCGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACC            >  SRR4302541.6192341/1‑94 (MQ=60)
                                                                                    CGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAG          >  SRR4302541.7858618/1‑94 (MQ=60)
                                                                                    CGTAACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAG          <  SRR4302541.3045003/94‑1 (MQ=60)
                                                                                     GTAACGTTAAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGC         >  SRR4302541.8307674/1‑94 (MQ=60)
                                                                                       AACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCA       >  SRR4302541.2645733/1‑94 (MQ=60)
                                                                                       AACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCA       >  SRR4302541.1668596/1‑94 (MQ=60)
                                                                                       AACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCA       <  SRR4302541.7676513/94‑1 (MQ=60)
                                                                                        ACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAA      >  SRR4302541.5188145/1‑94 (MQ=60)
                                                                                        ACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAA      >  SRR4302541.8440648/1‑94 (MQ=60)
                                                                                        ACGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAA      >  SRR4302541.429232/1‑94 (MQ=60)
                                                                                         CGTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAA     >  SRR4302541.7045657/1‑94 (MQ=60)
                                                                                         CGTTGAGGGTACTTTGAATTGCACCGAAGGGGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAA     >  SRR4302541.7928615/1‑94 (MQ=60)
                                                                                          GTTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAAT    <  SRR4302541.2975945/94‑1 (MQ=60)
                                                                                           TTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGACCCAGCCAAATA   <  SRR4302541.5328406/94‑1 (MQ=60)
                                                                                           TTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAATA   <  SRR4302541.2921101/94‑1 (MQ=60)
                                                                                           TTGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAATA   <  SRR4302541.2034804/94‑1 (MQ=60)
                                                                                            TGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAATAC  <  SRR4302541.6891328/94‑1 (MQ=60)
                                                                                            TGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAATAC  <  SRR4302541.7111329/94‑1 (MQ=60)
                                                                                            TGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAATAC  >  SRR4302541.8251874/1‑94 (MQ=60)
                                                                                            TGAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAATAC  <  SRR4302541.4339462/94‑1 (MQ=60)
                                                                                             |                                                                                            
GGTGGCGATAGGGACATTGCGTTTCGGGTTTTTCACCACACCTGCGGCAACGGAGGCACTTTCCACACCGATGAACGACCACAGCGTAACGTTAAGGGTACTTTGAATTGCACCGAAGGTGCCCAGGCCGCTGACGTTCCATGCCGCCATATAGGTTTCACCACGGAACCAGAACCAGCCAAATAC  >  NC_000913/4333926‑4334111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑