Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	744	338.8	17650688	97.8%	17262372	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,413,828	A→G	Y19H (TAT→CAT)	b4188 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,413,828	0	A	G	100.0%	1321.8 / NA	379	Y19H (TAT→CAT)	b4188	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (200/179); total (200/179)

Only 100 of 385 total aligned reads displayed.

TGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATC  >  NC_000913/4413738‑4413917

tGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCCGACTGTGCCGTGGCGCTCGCAGGATGAg                                                                                         <  2:1957078/93‑1 (MQ=255)

   tAATTGAGATCTGACCTTTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCa                                                                                      <  2:7614759/93‑1 (MQ=255)

      cTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTa                                                                                   >  1:6178655/1‑93 (MQ=255)

      cTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTa                                                                                   >  1:6524806/1‑93 (MQ=255)

       tGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTaa                                                                                  >  2:2892987/1‑93 (MQ=255)

        gagaTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAAt                                                                                 <  2:5426917/93‑1 (MQ=255)

         agaTCTGACCTATTTCATTCAGGCCCGTCCCGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAAtt                                                                                <  2:8166999/93‑1 (MQ=255)

           aTCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGc                                                                              >  2:4135971/1‑93 (MQ=255)

            tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             >  2:8312482/1‑93 (MQ=255)

            tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             <  1:1260188/93‑1 (MQ=255)

            tCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             >  2:4499623/1‑93 (MQ=255)

            tCTGACCGATTTCATTCAGGCCCGTCACGCATTCAGCACTGGCGAGTTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCa                                                                             <  1:4282101/93‑1 (MQ=255)

             cTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAg                                                                            <  2:2229207/93‑1 (MQ=255)

               gACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCg                                                                          >  2:1008862/1‑93 (MQ=255)

                aCCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGa                                                                         <  2:5919010/93‑1 (MQ=255)

                 ccTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAg                                                                        >  2:6829448/1‑93 (MQ=255)

                    aTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGt                                                                     >  1:2808395/1‑93 (MQ=255)

                    aTTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGCGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGt                                                                     <  1:1026199/93‑1 (MQ=255)

                       tcattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAg                                                                  <  2:677764/93‑1 (MQ=255)

                        tattcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAgg                                                                 <  2:7001610/92‑1 (MQ=255)

                         attcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGc                                                                <  2:5349785/93‑1 (MQ=255)

                         attcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGc                                                                >  2:5012455/1‑93 (MQ=255)

                          ttcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCa                                                               >  2:4278397/1‑93 (MQ=255)

                          ttcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCa                                                               <  1:5480446/93‑1 (MQ=255)

                           tcaGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCaa                                                              >  1:315464/1‑93 (MQ=255)

                            caGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAg                                                             >  1:7550284/1‑93 (MQ=255)

                              ggCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTa                                                           >  2:3880281/1‑93 (MQ=255)

                              ggCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTa                                                           >  1:8258452/1‑93 (MQ=255)

                                cccGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAAt                                                         <  1:8725172/93‑1 (MQ=255)

                                 ccGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCTAGGGTGAGGCAAGTAAtt                                                        >  1:3916303/1‑93 (MQ=255)

                                  cGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTg                                                       <  2:6599349/93‑1 (MQ=255)

                                   gTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGt                                                      <  1:8000949/93‑1 (MQ=255)

                                   gTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGt                                                      <  1:1558129/93‑1 (MQ=255)

                                   gTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGAGAGGCAAGTAATTGt                                                      >  2:8736367/1‑93 (MQ=255)

                                    tCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGtt                                                     <  2:3163438/93‑1 (MQ=255)

                                    tCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGtt                                                     >  2:6455042/1‑93 (MQ=255)

                                     cACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGttt                                                    <  1:6573897/93‑1 (MQ=255)

                                     cACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGttt                                                    >  2:517753/1‑93 (MQ=255)

                                      aCGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGTAGCGAGGGTGAGGCAAGTAATTGTTTc                                                   <  1:6950639/93‑1 (MQ=255)

                                       cGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCa                                                  >  2:2954943/1‑93 (MQ=255)

                                         cAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATc                                                <  1:4613702/93‑1 (MQ=255)

                                          aGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCg                                               >  2:3321114/1‑93 (MQ=255)

                                           gTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGt                                              >  1:8322598/1‑93 (MQ=255)

                                           gTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGt                                              <  1:1148461/93‑1 (MQ=255)

                                             cAGCACTTGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTATTTGTTTCATCGTCa                                            <  2:7143891/93‑1 (MQ=255)

                                             cAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCa                                            >  1:7199255/1‑93 (MQ=255)

                                              aGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAg                                           >  1:5273118/1‑93 (MQ=255)

                                              aGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAg                                           >  2:1348477/1‑93 (MQ=255)

                                                 aCTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTc                                        <  1:8630842/93‑1 (MQ=255)

                                                  cTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTcc                                       >  2:6229772/1‑93 (MQ=255)

                                                   tGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTCATTGTTTCATCGTCAGCTCCa                                      >  2:3631183/1‑93 (MQ=255)

                                                   tGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCa                                      >  2:7917669/1‑93 (MQ=255)

                                                    ggCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAt                                     <  1:5075957/93‑1 (MQ=255)

                                                     gCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGGAATTGTTTCATCGTCAGCTCCAtt                                    >  1:2923117/1‑93 (MQ=255)

                                                        aaTTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAttttt                                 <  1:2703870/93‑1 (MQ=255)

                                                          ttCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCg                               >  2:2656024/1‑93 (MQ=255)

                                                           tCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTACAGCGAGGGTGAGGCAAGTAATTGTTTCATCAACAGCTCCATTTTTCGt                              <  2:7818334/93‑1 (MQ=255)

                                                            cTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGtt                             <  2:4643654/93‑1 (MQ=255)

                                                            cTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGtt                             <  1:8095336/93‑1 (MQ=255)

                                                             tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGttt                            <  2:6722562/93‑1 (MQ=255)

                                                             tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGttt                            <  1:5560097/93‑1 (MQ=255)

                                                             tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGttt                            <  1:1357242/93‑1 (MQ=255)

                                                             tGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATGGTTTCATCGTCAGCTCCCTTTTTCGttt                            >  1:4119604/1‑93 (MQ=255)

                                                              gCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTTGTTTc                           >  1:7469467/1‑93 (MQ=255)

                                                                aGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTccc                         >  2:572906/1‑93 (MQ=255)

                                                                 gACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCCGCTCCCTTTTTCGTTTcccc                        >  1:2372088/1‑93 (MQ=255)

                                                                 gACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTcccc                        >  1:924411/1‑93 (MQ=255)

                                                                 gACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTcccc                        <  1:3569253/93‑1 (MQ=255)

                                                                 gACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTcccc                        >  2:1588666/1‑93 (MQ=255)

                                                                  aCTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCca                       >  2:3777182/1‑93 (MQ=255)

                                                                   cTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCTGCTCCATTTTTCGTTTCCCcac                      >  1:608924/1‑93 (MQ=255)

                                                                     gtgCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAt                    <  1:7587695/93‑1 (MQ=255)

                                                                     gtgCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAt                    <  2:7253620/93‑1 (MQ=255)

                                                                     gtgCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAt                    >  1:3437985/1‑93 (MQ=255)

                                                                     gtgCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAt                    >  2:1816010/1‑93 (MQ=255)

                                                                      gcgcGTGGCGGTCGCAGGATGAGTTACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGGTAGCTCCATTTTTCGTTTCCCCACATg                   <  2:2533725/90‑1 (MQ=255)

                                                                       gCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGt                  <  2:1905603/93‑1 (MQ=255)

                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 <  1:2159968/93‑1 (MQ=255)

                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 <  2:1115634/93‑1 (MQ=255)

                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 <  2:143913/93‑1 (MQ=255)

                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 >  2:2066625/1‑93 (MQ=255)

                                                                        ccGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGtt                 >  1:7124949/1‑93 (MQ=255)

                                                                         cGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTg                >  1:6276881/1‑93 (MQ=255)

                                                                          gTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGc               >  1:2593869/1‑93 (MQ=255)

                                                                          gTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGc               >  2:8602372/1‑93 (MQ=255)

                                                                           tGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCa              >  1:3303179/1‑93 (MQ=255)

                                                                             gcgcTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAgg            <  1:3102455/93‑1 (MQ=255)

                                                                             gcgcTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAgg            >  1:739887/1‑93 (MQ=255)

                                                                                cTCGCAGGATGAGTCACTAATTGCAGCGGGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCa         <  1:5715274/93‑1 (MQ=255)

                                                                                  cGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAtt       <  1:1791611/93‑1 (MQ=255)

                                                                                  cGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAtt       <  2:1153269/93‑1 (MQ=255)

                                                                                  cGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAtt       >  2:4714147/1‑93 (MQ=255)

                                                                                  cGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAtt       >  2:339831/1‑93 (MQ=255)

                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTcc     <  1:7819824/93‑1 (MQ=255)

                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTcc     <  1:3773207/93‑1 (MQ=255)

                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTcc     >  2:357085/1‑93 (MQ=255)

                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTcc     <  1:5919420/93‑1 (MQ=255)

                                                                                    cAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTca     >  1:6704945/1‑92 (MQ=255)

                                                                                      ggATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAt   >  1:2243753/1‑93 (MQ=255)

                                                                                       gATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTACCCACATGTTGCAGGGCATTCCATc  >  1:4861722/1‑93 (MQ=255)

TGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATC  >  NC_000913/4413738‑4413917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 208 total aligned reads displayed.

TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCGG  >  NC_000913/4413735‑4413921

TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATG                                                                                               <  SRR4302541.5010097/94‑1 (MQ=60)

TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATG                                                                                               <  SRR4302541.923325/94‑1 (MQ=60)

TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATG                                                                                               >  SRR4302541.7065297/1‑94 (MQ=60)

TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATG                                                                                               <  SRR4302541.6135193/94‑1 (MQ=60)

TATTGCTAACTGAGATCTGACCTATTTCAGTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATG                                                                                               <  SRR4302541.7043841/94‑1 (MQ=60)

 ATTGCTAACTGAGATCTAACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGA                                                                                              <  SRR4302541.6980880/94‑1 (MQ=60)

  TTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAG                                                                                             <  SRR4302541.3086895/94‑1 (MQ=60)

   TGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGT                                                                                            >  SRR4302541.7811785/1‑94 (MQ=60)

    GCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTC                                                                                           <  SRR4302541.634996/94‑1 (MQ=60)

     CTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCA                                                                                          >  SRR4302541.723827/1‑94 (MQ=60)

      TAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCAC                                                                                         >  SRR4302541.8306944/1‑94 (MQ=60)

       AACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACT                                                                                        <  SRR4302541.6852424/94‑1 (MQ=60)

        ACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTA                                                                                       >  SRR4302541.6241782/1‑94 (MQ=60)

        ACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTA                                                                                       >  SRR4302541.8359031/1‑94 (MQ=60)

        ACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTA                                                                                       <  SRR4302541.5140922/94‑1 (MQ=60)

        ACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTA                                                                                       >  SRR4302541.6591398/1‑94 (MQ=60)

         CTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGCTGAGCCACTAA                                                                                      >  SRR4302541.1151644/1‑94 (MQ=60)

         CTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAA                                                                                      >  SRR4302541.1312651/1‑94 (MQ=60)

         CTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAA                                                                                      >  SRR4302541.3822629/1‑94 (MQ=60)

          TGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAAT                                                                                     <  SRR4302541.6106338/94‑1 (MQ=60)

           GAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATT                                                                                    >  SRR4302541.6491095/1‑94 (MQ=60)

            AGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCGCTAATTG                                                                                   >  SRR4302541.2879567/1‑94 (MQ=60)

            AGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTG                                                                                   <  SRR4302541.8812597/94‑1 (MQ=60)

             GATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGC                                                                                  <  SRR4302541.4883327/94‑1 (MQ=60)

              ATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCA                                                                                 <  SRR4302541.7528502/94‑1 (MQ=60)

               TCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAG                                                                                <  SRR4302541.1272719/94‑1 (MQ=60)

               TCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAG                                                                                <  SRR4302541.1272720/94‑1 (MQ=60)

               TCTGACCGATTTCATTCAGGCCCGTCACGCATTCAGCACTGGCGAGTTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAG                                                                                <  SRR4302541.4324867/94‑1 (MQ=60)

                CTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGC                                                                               >  SRR4302541.4391366/1‑94 (MQ=60)

                CTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGCCACTAATTGCAGC                                                                               >  SRR4302541.3282939/1‑94 (MQ=60)

                 TGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCG                                                                              >  SRR4302541.170106/1‑94 (MQ=60)

                  GACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGA                                                                             >  SRR4302541.4943994/1‑94 (MQ=60)

                  GACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGA                                                                             >  SRR4302541.6144171/1‑94 (MQ=60)

                  GACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGA                                                                             <  SRR4302541.1459409/94‑1 (MQ=60)

                  GACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGA                                                                             <  SRR4302541.5267422/94‑1 (MQ=60)

                   ACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAG                                                                            <  SRR4302541.8472694/94‑1 (MQ=60)

                   ACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAG                                                                            <  SRR4302541.8134400/94‑1 (MQ=60)

                    CCTATTTCATTCAGGCCCGTCACGCGGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGG                                                                           <  SRR4302541.4181590/94‑1 (MQ=60)

                    CCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGG                                                                           <  SRR4302541.4877826/94‑1 (MQ=60)

                    CCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGG                                                                           <  SRR4302541.62686/94‑1 (MQ=60)

                    CCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGG                                                                           <  SRR4302541.8855099/94‑1 (MQ=60)

                     CTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGG                                                                          <  SRR4302541.8792349/94‑1 (MQ=60)

                      TATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGT                                                                         >  SRR4302541.3877949/1‑94 (MQ=60)

                      TATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGT                                                                         <  SRR4302541.6701341/94‑1 (MQ=60)

                      TATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGT                                                                         >  SRR4302541.2836792/1‑94 (MQ=60)

                      TATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGT                                                                         <  SRR4302541.1222132/94‑1 (MQ=60)

                      TATTGCATTCAGGCCCGTCACGCAGTCAGCACTTGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGT                                                                         <  SRR4302541.6701342/94‑1 (MQ=60)

                       ATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGCGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTG                                                                        <  SRR4302541.1035681/94‑1 (MQ=60)

                        TTTCATTCAGGCCCGTCACGCAGTCAGCAGTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGA                                                                       <  SRR4302541.6365098/94‑1 (MQ=60)

                         TTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAG                                                                      <  SRR4302541.7661144/94‑1 (MQ=60)

                         TTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAG                                                                      <  SRR4302541.5873524/94‑1 (MQ=60)

                          TCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGG                                                                     >  SRR4302541.7139653/1‑94 (MQ=60)

                           CATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGC                                                                    >  SRR4302541.2794085/1‑94 (MQ=60)

                           CATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGC                                                                    <  SRR4302541.7515892/94‑1 (MQ=60)

                           CATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGC                                                                    <  SRR4302541.2638817/94‑1 (MQ=60)

                            ATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCA                                                                   >  SRR4302541.5950348/1‑94 (MQ=60)

                            ATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCA                                                                   >  SRR4302541.7683942/1‑94 (MQ=60)

                            ATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCA                                                                   >  SRR4302541.7180666/1‑94 (MQ=60)

                            ATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCA                                                                   >  SRR4302541.2727681/1‑94 (MQ=60)

                             TTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGCGTCACTAATTGCAGCGAGGGTGAGGCAA                                                                  >  SRR4302541.318261/1‑94 (MQ=60)

                             TTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAA                                                                  >  SRR4302541.3016753/1‑94 (MQ=60)

                             TTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAA                                                                  >  SRR4302541.318263/1‑94 (MQ=60)

                             TTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAA                                                                  >  SRR4302541.2387447/1‑94 (MQ=60)

                             TTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAA                                                                  <  SRR4302541.5536637/94‑1 (MQ=60)

                              TCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAG                                                                 >  SRR4302541.3324844/1‑94 (MQ=60)

                              TCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAG                                                                 >  SRR4302541.7630968/1‑94 (MQ=60)

                              TCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAG                                                                 <  SRR4302541.3221628/94‑1 (MQ=60)

                               CAGGCCCGTCACGCAGTCAGCACTGGCTAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGT                                                                <  SRR4302541.5635264/94‑1 (MQ=60)

                               CAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGT                                                                >  SRR4302541.8506724/1‑94 (MQ=60)

                               CAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGT                                                                <  SRR4302541.939938/94‑1 (MQ=60)

                                AGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTA                                                               >  SRR4302541.8348376/1‑94 (MQ=60)

                                AGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTA                                                               >  SRR4302541.2489292/1‑94 (MQ=60)

                                 GGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTTACTAATTGCAGCGAGGGGGAGGCAAGTAA                                                              >  SRR4302541.2894277/1‑94 (MQ=60)

                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCTAGGGTGAGGCAAGTAATT                                                            >  SRR4302541.3955384/1‑94 (MQ=60)

                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            <  SRR4302541.355386/94‑1 (MQ=60)

                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            <  SRR4302541.2881521/94‑1 (MQ=60)

                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            >  SRR4302541.2151466/1‑94 (MQ=60)

                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            >  SRR4302541.3944250/1‑94 (MQ=60)

                                   CCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATT                                                            <  SRR4302541.8818461/94‑1 (MQ=60)

                                     CGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGT                                                          >  SRR4302541.103702/1‑94 (MQ=60)

                                     CGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGT                                                          >  SRR4302541.3417973/1‑94 (MQ=60)

                                      GTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTT                                                         <  SRR4302541.8088983/94‑1 (MQ=60)

                                      GTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTT                                                         >  SRR4302541.6190463/1‑94 (MQ=60)

                                      GTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTT                                                         <  SRR4302541.1573738/94‑1 (MQ=60)

                                       TCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTT                                                        <  SRR4302541.6906950/94‑1 (MQ=60)

                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGCGGGTGAGGCAAGTAATTGTTTA                                                       >  SRR4302541.3550543/1‑94 (MQ=60)

                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTC                                                       <  SRR4302541.6641153/94‑1 (MQ=60)

                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTC                                                       <  SRR4302541.6641154/94‑1 (MQ=60)

                                        CACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTC                                                       <  SRR4302541.2334442/94‑1 (MQ=60)

                                         ACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGTAGCGAGGGTGAGGCAAGTAATTGTTTCA                                                      <  SRR4302541.7024770/94‑1 (MQ=60)

                                          CGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCAT                                                     >  SRR4302541.2996889/1‑94 (MQ=60)

                                          CGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCAT                                                     <  SRR4302541.879358/94‑1 (MQ=60)

                                            CAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCG                                                   <  SRR4302541.4660577/94‑1 (MQ=60)

                                             AGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGT                                                  >  SRR4302541.8413007/1‑94 (MQ=60)

                                              GTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTC                                                 >  SRR4302541.3647567/1‑94 (MQ=60)

                                              GTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTC                                                 <  SRR4302541.1159407/94‑1 (MQ=60)

                                               TCAGCACTTGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCA                                                <  SRR4302541.7502457/94‑1 (MQ=60)

                                               TCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCA                                                >  SRR4302541.7276058/1‑94 (MQ=60)

                                                CAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAG                                               >  SRR4302541.6313382/1‑94 (MQ=60)

                                                CAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAG                                               >  SRR4302541.1415755/1‑94 (MQ=60)

                                                CAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAG                                               >  SRR4302541.5327437/1‑94 (MQ=60)

                                                CAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAAATGTTTCATCGTCAG                                               <  SRR4302541.4949203/94‑1 (MQ=60)

                                                 TGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGC                                              <  SRR4302541.1778239/94‑1 (MQ=60)

                                                  GCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCT                                             >  SRR4302541.79984/1‑94 (MQ=60)

                                                  GCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCT                                             >  SRR4302541.7090840/1‑94 (MQ=60)

                                                  GCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCT                                             >  SRR4302541.4818250/1‑94 (MQ=60)

                                                   CACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTC                                            <  SRR4302541.5679173/94‑1 (MQ=60)

                                                    ACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCC                                           <  SRR4302541.8723329/94‑1 (MQ=60)

                                                    ACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCC                                           >  SRR4302541.6081674/1‑94 (MQ=60)

                                                    ACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCC                                           >  SRR4302541.7317241/1‑94 (MQ=60)

                                                     CTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCA                                          <  SRR4302541.3797079/94‑1 (MQ=60)

                                                     CTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCA                                          <  SRR4302541.7564707/94‑1 (MQ=60)

                                                     CTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCA                                          >  SRR4302541.7455122/1‑94 (MQ=60)

                                                     CTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGGGAGGCAGGTAATTGTTTCATCGTCAGCTCCA                                          >  SRR4302541.7638051/1‑94 (MQ=60)

                                                      TGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAT                                         <  SRR4302541.1713645/94‑1 (MQ=60)

                                                      TGGCGAATTCTGCAGACTGTGCCGTGGCGCTAGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCAT                                         >  SRR4302541.566994/1‑94 (MQ=60)

                                                       GGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATT                                        <  SRR4302541.4267704/94‑1 (MQ=60)

                                                       GGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATT                                        <  SRR4302541.5128117/94‑1 (MQ=60)

                                                       GGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGGAATTGTTTCATCGTCAGCTCCATT                                        >  SRR4302541.2952514/1‑94 (MQ=60)

                                                        GCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTT                                       <  SRR4302541.7711475/94‑1 (MQ=60)

                                                        GCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTT                                       <  SRR4302541.4437520/94‑1 (MQ=60)

                                                         CGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTT                                      >  SRR4302541.756883/1‑94 (MQ=60)

                                                          GAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTT                                     >  SRR4302541.995687/1‑94 (MQ=60)

                                                           AATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTC                                    <  SRR4302541.526077/94‑1 (MQ=60)

                                                           AATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTC                                    <  SRR4302541.2730756/94‑1 (MQ=60)

                                                           AATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTC                                    >  SRR4302541.8828480/1‑94 (MQ=60)

                                                           AATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTC                                    <  SRR4302541.6820924/94‑1 (MQ=60)

                                                            ATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCG                                   <  SRR4302541.623447/94‑1 (MQ=60)

                                                               CTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTT                                <  SRR4302541.8184083/94‑1 (MQ=60)

                                                               CTGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATGGTTTCATCGTCAGCTCCCTTTTTCGTTT                                >  SRR4302541.4160291/1‑94 (MQ=60)

                                                                TGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGTGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTC                               <  SRR4302541.1265705/94‑1 (MQ=60)

                                                                TGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTTGTTTC                               >  SRR4302541.7549341/1‑94 (MQ=60)

                                                                TGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTC                               <  SRR4302541.1370644/94‑1 (MQ=60)

                                                                TGCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTC                               <  SRR4302541.5617021/94‑1 (MQ=60)

                                                                 GCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCC                              >  SRR4302541.812939/1‑94 (MQ=60)

                                                                 GCAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCC                              <  SRR4302541.2785731/94‑1 (MQ=60)

                                                                  CAGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCC                             <  SRR4302541.3160112/94‑1 (MQ=60)

                                                                   AGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCCGCTCCCTTTTTCGTTTCCCC                            >  SRR4302541.2395246/1‑94 (MQ=60)

                                                                   AGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCC                            >  SRR4302541.933095/1‑94 (MQ=60)

                                                                   AGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCC                            >  SRR4302541.2395245/1‑94 (MQ=60)

                                                                   AGACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCC                            <  SRR4302541.3433461/94‑1 (MQ=60)

                                                                    GACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCA                           <  SRR4302541.3605401/94‑1 (MQ=60)

                                                                     ACTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCTGCTCCATTTTTCGTTTCCCCAC                          >  SRR4302541.614650/1‑94 (MQ=60)

                                                                      CTGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACA                         >  SRR4302541.590200/1‑94 (MQ=60)

                                                                       TGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAT                        <  SRR4302541.674541/94‑1 (MQ=60)

                                                                       TGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAT                        >  SRR4302541.7268471/1‑94 (MQ=60)

                                                                       TGTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACAT                        >  SRR4302541.3472335/1‑94 (MQ=60)

                                                                        GTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATG                       <  SRR4302541.7668760/94‑1 (MQ=60)

                                                                        GTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATG                       <  SRR4302541.5330959/94‑1 (MQ=60)

                                                                        GTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATG                       <  SRR4302541.4081808/94‑1 (MQ=60)

                                                                        GTGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATG                       <  SRR4302541.5615369/94‑1 (MQ=60)

                                                                        GTGCCGGGGCGCTCGCAGGAGGAGGCACTAATTGCAGCGAGGGTGAGGCAAGGAATTGTGGCATCGTCAGCgccaattgtcggtgccccacaag                       >  SRR4302541.7925560/1‑71 (MQ=33)

                                                                         TGCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGT                      >  SRR4302541.6164120/1‑94 (MQ=60)

                                                                          GCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTT                     >  SRR4302541.3448665/1‑94 (MQ=60)

                                                                          GCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTT                     <  SRR4302541.5020263/94‑1 (MQ=60)

                                                                          GCCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTT                     >  SRR4302541.7200843/1‑94 (MQ=60)

                                                                           CCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTG                    >  SRR4302541.6340978/1‑94 (MQ=60)

                                                                           CCGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTG                    <  SRR4302541.2180860/94‑1 (MQ=60)

                                                                            CGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGC                   >  SRR4302541.7391543/1‑94 (MQ=60)

                                                                            CGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGC                   >  SRR4302541.3478454/1‑94 (MQ=60)

                                                                            CGTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGC                   >  SRR4302541.2619859/1‑94 (MQ=60)

                                                                             GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCA                  >  SRR4302541.3336379/1‑94 (MQ=60)

                                                                             GTGGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCA                  <  SRR4302541.1370481/94‑1 (MQ=60)

                                                                               GGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGG                >  SRR4302541.746917/1‑94 (MQ=60)

                                                                               GGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGG                >  SRR4302541.8475390/1‑94 (MQ=60)

                                                                               GGCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGG                <  SRR4302541.2074019/94‑1 (MQ=60)

                                                                                GCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGG               <  SRR4302541.3133890/94‑1 (MQ=60)

                                                                                GCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGG               <  SRR4302541.7956915/94‑1 (MQ=60)

                                                                                GCGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGG               <  SRR4302541.3810110/94‑1 (MQ=60)

                                                                                 CGCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGAGC              >  SRR4302541.8272475/1‑94 (MQ=60)

                                                                                  GCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCA             >  SRR4302541.8282638/1‑94 (MQ=60)

                                                                                  GCTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCA             <  SRR4302541.1401389/94‑1 (MQ=60)

                                                                                   CTCGCAGGATGAGTCACTAATTGCAGCGGGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAT            <  SRR4302541.5773549/94‑1 (MQ=60)

                                                                                   CTCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCAT            <  SRR4302541.2211956/94‑1 (MQ=60)

                                                                                    TCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATT           >  SRR4302541.1188515/1‑94 (MQ=60)

                                                                                    TCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATT           >  SRR4302541.2720058/1‑94 (MQ=60)

                                                                                    TCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATC           >  SRR4302541.2464379/1‑94 (MQ=60)

                                                                                    TCGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGCCAGCTCCATTTTTCGTTTCCCCACATTTTGCAGGtcatc           >  SRR4302541.2464380/1‑89 (MQ=60)

                                                                                     CGCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTC          <  SRR4302541.1809014/94‑1 (MQ=60)

                                                                                      GCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCC         >  SRR4302541.560178/1‑94 (MQ=60)

                                                                                      GCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCC         >  SRR4302541.8369961/1‑94 (MQ=60)

                                                                                      GCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCA         >  SRR4302541.2740371/1‑94 (MQ=60)

                                                                                      GCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCA         >  SRR4302541.6775519/1‑94 (MQ=60)

                                                                                      CCAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCC         <  SRR4302541.7649844/94‑1 (MQ=60)

                                                                                       CAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCA        <  SRR4302541.7904601/94‑1 (MQ=60)

                                                                                       CAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCA        >  SRR4302541.4571345/1‑94 (MQ=60)

                                                                                       CAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCA        <  SRR4302541.3811108/94‑1 (MQ=60)

                                                                                       CAGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCA        <  SRR4302541.5979687/94‑1 (MQ=60)

                                                                                        AGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       >  SRR4302541.5348172/1‑94 (MQ=60)

                                                                                        AGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       >  SRR4302541.2265468/1‑94 (MQ=60)

                                                                                        AGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       <  SRR4302541.898578/94‑1 (MQ=60)

                                                                                        AGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       >  SRR4302541.4115788/1‑94 (MQ=60)

                                                                                        AGGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCAT       <  SRR4302541.1855557/94‑1 (MQ=60)

                                                                                         GGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTGGTTTCCCAACACGTTGCAGGGCTTTCCATC      >  SRR4302541.6605375/1‑94 (MQ=60)

                                                                                         GGATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTACCCACATGTTGCAGGGCATTCCATC      >  SRR4302541.4911312/1‑94 (MQ=60)

                                                                                           ATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGC    <  SRR4302541.7160937/94‑1 (MQ=60)

                                                                                           ATGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGC    >  SRR4302541.5573554/1‑94 (MQ=60)

                                                                                            TGAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCG   <  SRR4302541.2400707/94‑1 (MQ=60)

                                                                                             GAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCGG  >  SRR4302541.592774/1‑94 (MQ=60)

                                                                                             GAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCGG  >  SRR4302541.3267526/1‑94 (MQ=60)

TATTGCTAACTGAGATCTGACCTATTTCATTCAGGCCCGTCACGCAGTCAGCACTGGCGAATTCTGCAGACTGTGCCGTGGCGCTCGCAGGATAAGTCACTAATTGCAGCGAGGGTGAGGCAAGTAATTGTTTCATCGTCAGCTCCATTTTTCGTTTCCCCACATGTTGCAGGGCATTCCATCGCGG  >  NC_000913/4413735‑4413921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`