Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,478,527 Δ1 bp intergenic (+36/+23) yjgN → / ← valS hypothetical protein/valine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,478,5270G.99.7% 1372.7 / ‑2.5 295intergenic (+36/+23)yjgN/valShypothetical protein/valine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base . (162/132);  minor base T (0/1);  total (162/133)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01

Only 100 of 313 total aligned reads displayed.

AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA  >  NC_000913/4478437‑4478614
                                                                                          |                                                                                       
aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGttt                                                                                    >  2:5270453/1‑93 (MQ=255)
 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGtttt                                                                                   >  1:6044901/1‑93 (MQ=255)
 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGtttt                                                                                   >  2:2451531/1‑93 (MQ=255)
  gCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtc                                                                                  <  1:4848770/93‑1 (MQ=255)
   cttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                                                 <  1:1343130/93‑1 (MQ=255)
   cttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                                                 <  1:7085069/93‑1 (MQ=255)
   cttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                                                 >  2:8632028/1‑93 (MQ=255)
    ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtcat                                                                                <  2:8052881/93‑1 (MQ=255)
     tcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtcatc                                                                               <  2:7241531/93‑1 (MQ=255)
      cttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtcatca                                                                              <  1:3261918/93‑1 (MQ=255)
       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAc                                                                             >  1:5580181/1‑93 (MQ=255)
       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAc                                                                             >  1:2671653/1‑93 (MQ=255)
       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAc                                                                             <  1:5139028/93‑1 (MQ=255)
       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCAGGCCTTCGTTTTCATCAc                                                                             >  1:7376654/1‑93 (MQ=255)
         aGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtg                                                                           >  2:3888117/1‑93 (MQ=255)
          gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtgt                                                                          >  1:6390537/1‑93 (MQ=255)
          gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtgt                                                                          >  2:5446834/1‑93 (MQ=255)
          gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtgt                                                                          <  2:2903089/93‑1 (MQ=255)
               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGtttt                                                                     >  1:7645320/1‑93 (MQ=255)
                aTTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTg                                                                    >  2:4402431/1‑93 (MQ=255)
                 tttCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGa                                                                   <  1:2255978/93‑1 (MQ=255)
                 tttCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGACGGAGAATTGTCCGGGCTTCGTTTTTATCACTGTGtttttt                                                                   >  2:7742580/1‑91 (MQ=255)
                    cACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTa                                                                >  1:1229473/1‑93 (MQ=255)
                     aCGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTAc                                                               >  1:8306044/1‑93 (MQ=255)
                     aCGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTAc                                                               >  1:3744082/1‑93 (MQ=255)
                       ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAg                                                             <  1:5746555/93‑1 (MQ=255)
                       ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAg                                                             >  1:7957162/1‑93 (MQ=255)
                       ggggAGTTATGCCTTCTTTACCATTTCTATAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAg                                                             <  2:3847205/93‑1 (MQ=255)
                        gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgc                                                            >  2:2677867/1‑93 (MQ=255)
                        gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgc                                                            <  2:192692/93‑1 (MQ=255)
                        gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgc                                                            >  2:6050718/1‑93 (MQ=255)
                        gggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTGCATCACTGTGTTTTGATTACAgc                                                            >  2:6012756/1‑93 (MQ=255)
                          gAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgcgc                                                          >  1:3865394/1‑93 (MQ=255)
                          gAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCATTCGTTTTCATCACTGTGTTTTGATTACAgcgc                                                          <  1:6159980/93‑1 (MQ=255)
                           aGTTATGCCTTCTTTACAATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGcgcg                                                         <  1:4016422/93‑1 (MQ=255)
                            gTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcgg                                                        >  2:908057/1‑93 (MQ=255)
                             ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggc                                                       >  1:6485009/1‑93 (MQ=255)
                             ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggc                                                       <  2:4630977/93‑1 (MQ=255)
                             ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggc                                                       >  2:1238297/1‑93 (MQ=255)
                               aTGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa                                                     <  1:973169/93‑1 (MQ=255)
                                 tccTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                                   <  2:8132428/92‑1 (MQ=255)
                                 gCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                                   <  1:7153479/93‑1 (MQ=255)
                                 gCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                                   >  1:8806750/1‑93 (MQ=255)
                                    ttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCCCTGTGTTTTGATTTACGCGCGGCGCTaaac                                                >  1:1649751/1‑91 (MQ=255)
                                    ttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa                                                >  2:5330589/1‑93 (MQ=255)
                                     tcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAg                                               <  1:8699807/93‑1 (MQ=255)
                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                                             <  2:4399643/93‑1 (MQ=255)
                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                                             <  2:5414668/93‑1 (MQ=255)
                                        ttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct                                            >  1:5348653/1‑93 (MQ=255)
                                           ccATTTCTGTAGGAGATAAAAAGGGTCGGAGCGTGCTTCTGCCTTCGTTTTCATCATTTTGTTTTGATTACAGCGCGGCGATAACAGCctggt                                         <  2:3568039/93‑3 (MQ=255)
                                             aTTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGt                                       >  1:8487450/1‑93 (MQ=255)
                                             aTTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGt                                       <  1:4227837/93‑1 (MQ=255)
                                              tttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt                                      <  1:3492588/93‑1 (MQ=255)
                                              tttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt                                      >  2:1093790/1‑93 (MQ=255)
                                               ttCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTc                                     <  2:5537399/93‑1 (MQ=255)
                                                 cTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCaa                                   <  2:6523354/93‑1 (MQ=255)
                                                 cTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCaa                                   >  1:541062/1‑93 (MQ=255)
                                                  tGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt                                  <  2:3309620/93‑1 (MQ=255)
                                                  tGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt                                  >  2:8412209/1‑93 (MQ=255)
                                                  tGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt                                  >  2:1365282/1‑93 (MQ=255)
                                                    tAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa                                >  1:4548146/1‑93 (MQ=255)
                                                     aaGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg                               <  2:7684257/93‑1 (MQ=255)
                                                     aaGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg                               >  2:3806436/1‑93 (MQ=255)
                                                      agagATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt                              <  2:7542633/93‑1 (MQ=255)
                                                      agagATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTACTGTTCAATCAGt                              >  2:4950023/1‑93 (MQ=255)
                                                       gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt                             <  2:3447886/93‑1 (MQ=255)
                                                       gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt                             >  1:3654674/1‑93 (MQ=255)
                                                       gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt                             <  1:3023001/93‑1 (MQ=255)
                                                         agataaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt                            >  2:7380576/5‑93 (MQ=255)
                                                         agataaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt                            >  2:8673282/5‑93 (MQ=255)
                                                         agataaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt                            >  1:5511414/5‑93 (MQ=255)
                                                          gataaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttc                           >  1:2550292/4‑93 (MQ=255)
                                                             aaaaaaGGCCGGAGCATGCCCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct                        <  1:1554351/93‑1 (MQ=255)
                                                              aaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctt                       >  1:8132699/1‑93 (MQ=255)
                                                              aaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctt                       >  1:2471545/1‑93 (MQ=255)
                                                               aaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt                      >  1:1887381/1‑93 (MQ=255)
                                                               aaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt                      <  2:6219561/93‑1 (MQ=255)
                                                                aaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc                     >  2:3102857/1‑93 (MQ=255)
                                                                  aGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttcgt                   >  1:5856256/1‑92 (MQ=255)
                                                                  aGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttcgc                   <  1:35933/93‑1 (MQ=255)
                                                                  aGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttcgc                   <  2:1493075/93‑1 (MQ=255)
                                                                  aGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttcgc                   >  2:6809919/1‑93 (MQ=255)
                                                                    gCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTtcgctttcgctt                 >  2:5670570/1‑93 (MQ=255)
                                                                       cggagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTcc               <  1:6943610/89‑1 (MQ=255)
                                                                       cggagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTcc               >  1:752265/5‑93 (MQ=255)
                                                                       cggagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTcc               >  1:3354179/5‑93 (MQ=255)
                                                                        ggagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACATCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg              <  1:4790046/90‑1 (MQ=255)
                                                                        ggagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg              >  2:8278961/4‑93 (MQ=255)
                                                                         gagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGc             >  2:8751851/3‑93 (MQ=255)
                                                                         gagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGc             >  2:3194648/3‑93 (MQ=255)
                                                                            catgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATa          <  2:8516407/93‑1 (MQ=255)
                                                                            catgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATa          <  1:5703942/93‑1 (MQ=255)
                                                                             atgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAg         >  1:7744890/1‑93 (MQ=255)
                                                                                  ccGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTc    >  2:4055770/1‑93 (MQ=255)
                                                                                  ccGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTc    >  2:6725703/1‑93 (MQ=255)
                                                                                  ccGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTc    <  2:6672170/93‑1 (MQ=255)
                                                                                    ggCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCa  <  2:6330699/93‑1 (MQ=255)
                                                                                    ggCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCa  >  1:2880639/1‑93 (MQ=255)
                                                                                    ggCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCa  >  1:786433/1‑93 (MQ=255)
                                                                                    ggCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCCGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTccc  >  2:4306741/1‑92 (MQ=255)
                                                                                          |                                                                                       
AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA  >  NC_000913/4478437‑4478614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCT  >  NC_000913/4478432‑4478620
                                                                                                |                                                                                             
GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTC                                                                                               <  SRR4302541.5915168/94‑1 (MQ=60)
GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTC                                                                                               <  SRR4302541.910288/94‑1 (MQ=60)
GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTC                                                                                               >  SRR4302541.5293334/1‑94 (MQ=60)
GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTC                                                                                               <  SRR4302541.4971833/94‑1 (MQ=60)
  TAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGT                                                                                            >  SRR4302541.2037852/1‑94 (MQ=60)
   AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                                           >  SRR4302541.1286680/1‑94 (MQ=60)
   AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                                           <  SRR4302541.251773/94‑1 (MQ=60)
   AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                                           <  SRR4302541.8509493/94‑1 (MQ=60)
    AAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTT                                                                                          <  SRR4302541.5401785/94‑1 (MQ=60)
     ATGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                                         <  SRR4302541.8021577/94‑1 (MQ=60)
     AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                                         >  SRR4302541.6106740/1‑94 (MQ=60)
     AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                                         >  SRR4302541.713383/1‑94 (MQ=60)
     AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                                         >  SRR4302541.8037081/1‑94 (MQ=60)
     AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                                         >  SRR4302541.935468/1‑94 (MQ=60)
     AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTT                                                                                         >  SRR4302541.160112/1‑94 (MQ=60)
      GGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTC                                                                                        <  SRR4302541.1773787/94‑1 (MQ=60)
       GCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCA                                                                                       <  SRR4302541.4898208/94‑1 (MQ=60)
        CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      <  SRR4302541.7160431/94‑1 (MQ=60)
        CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      >  SRR4302541.8744654/1‑94 (MQ=60)
        CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      <  SRR4302541.1356366/94‑1 (MQ=60)
        CTTCTTAGCCAGTATTTCACGGGGAGGTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      >  SRR4302541.6477770/1‑94 (MQ=60)
        CTTCTTAGCCAGTATATCACGGAAAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      <  SRR4302541.7924621/94‑1 (MQ=60)
           CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                                                   >  SRR4302541.7455787/1‑94 (MQ=60)
           CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                                                   >  SRR4302541.5637302/1‑94 (MQ=60)
           CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                                                   >  SRR4302541.5637301/1‑94 (MQ=60)
           CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                                                   >  SRR4302541.2698197/1‑94 (MQ=60)
           CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                                                   <  SRR4302541.3294839/94‑1 (MQ=60)
           CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAC                                                                                   >  SRR4302541.8519127/1‑94 (MQ=60)
           CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCAGGCCTTCGTTTTCATCAC                                                                                   >  SRR4302541.7455505/1‑94 (MQ=60)
           CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGCGCATGCTCCGGCCTTCGTTTTCATCAC                                                                                   >  SRR4302541.2200080/1‑94 (MQ=60)
            TTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACT                                                                                  <  SRR4302541.5191874/94‑1 (MQ=60)
              AGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGT                                                                                >  SRR4302541.6455778/1‑94 (MQ=60)
               GCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTG                                                                               <  SRR4302541.3689169/94‑1 (MQ=60)
               GCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTG                                                                               >  SRR4302541.3558995/1‑94 (MQ=60)
                CCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTGTTCATCACTGTGT                                                                              >  SRR4302541.7906486/1‑94 (MQ=60)
                 CAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTT                                                                             <  SRR4302541.700308/94‑1 (MQ=60)
                   GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCCTGCTCCCGCCCTT‑‑GTTTTTATCACTGTGTTTT                                                                           >  SRR4302541.3232195/1‑94 (MQ=58)
                   GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTTGTTTTCATCACTGTGTTTT                                                                           >  SRR4302541.5118123/1‑94 (MQ=60)
                   GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTT                                                                           >  SRR4302541.7726810/1‑94 (MQ=60)
                   GTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTT                                                                           >  SRR4302541.2639309/1‑94 (MQ=60)
                    TATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCCTGCTCCGGCCTTCGTTTTCATCACTGTGTTTTG                                                                          >  SRR4302541.8598290/1‑94 (MQ=60)
                      TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                                        >  SRR4302541.577236/1‑94 (MQ=60)
                      TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                                        <  SRR4302541.5458694/94‑1 (MQ=60)
                      TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                                        <  SRR4302541.2277764/94‑1 (MQ=60)
                      TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                                        <  SRR4302541.4880871/94‑1 (MQ=60)
                       TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                                       <  SRR4302541.2833707/94‑1 (MQ=60)
                       TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                                       <  SRR4302541.5694021/94‑1 (MQ=60)
                       TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                                       <  SRR4302541.5844764/94‑1 (MQ=60)
                        TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                                      >  SRR4302541.1241560/1‑94 (MQ=60)
                         CACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTAC                                                                     >  SRR4302541.8396346/1‑94 (MQ=60)
                         CACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTAC                                                                     >  SRR4302541.3781767/1‑94 (MQ=60)
                           CGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAG                                                                   >  SRR4302541.8044845/1‑94 (MQ=60)
                            GGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGC                                                                  <  SRR4302541.5805078/94‑1 (MQ=60)
                             GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCG                                                                 >  SRR4302541.2448490/1‑94 (MQ=60)
                             GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCG                                                                 >  SRR4302541.2567036/1‑94 (MQ=60)
                             GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTGTTCATCACTGTGTTTTGATTACAGCG                                                                 >  SRR4302541.3325429/1‑94 (MQ=60)
                              GGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGC                                                                >  SRR4302541.3904274/1‑94 (MQ=60)
                              GGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGC                                                                >  SRR4302541.6594009/1‑94 (MQ=60)
                               GAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCG                                                               <  SRR4302541.5697453/94‑1 (MQ=60)
                               GAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCG                                                               <  SRR4302541.6222934/94‑1 (MQ=60)
                               GAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCATTCGTTTTCATCACTGTGTTTTGATTACAGCGCG                                                               <  SRR4302541.6222935/94‑1 (MQ=60)
                                AGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGG                                                              >  SRR4302541.7770000/1‑94 (MQ=60)
                                AGTTATGCCTTCTTTACAATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGG                                                              <  SRR4302541.4056130/94‑1 (MQ=60)
                                 GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGC                                                             >  SRR4302541.7695813/1‑94 (MQ=60)
                                 GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGC                                                             >  SRR4302541.5570771/1‑94 (MQ=60)
                                 GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGC                                                             >  SRR4302541.6551113/1‑94 (MQ=60)
                                   TATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGA                                                           >  SRR4302541.7220216/1‑94 (MQ=60)
                                    ATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAT                                                          <  SRR4302541.982303/94‑1 (MQ=60)
                                    ATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAT                                                          >  SRR4302541.2277449/1‑94 (MQ=60)
                                    ATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAT                                                          <  SRR4302541.3903030/94‑1 (MQ=60)
                                     TGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATA                                                         >  SRR4302541.8900796/1‑94 (MQ=60)
                                      GCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAA                                                        <  SRR4302541.7229738/94‑1 (MQ=60)
                                       CCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAC                                                       <  SRR4302541.3702652/94‑1 (MQ=60)
                                       CCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAC                                                       >  SRR4302541.3763983/1‑94 (MQ=60)
                                        CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCTGTTTCATCACTGTGTTTTCATTACATCGCGGCGATAACA                                                      >  SRR4302541.304202/1‑94 (MQ=60)
                                        CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCCCTGTGTTTTGATTtacgcgcggcgctaaac                                                      >  SRR4302541.1666047/1‑77 (MQ=60)
                                        CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACA                                                      >  SRR4302541.5977177/1‑94 (MQ=60)
                                          TCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGC                                                    <  SRR4302541.8792911/94‑1 (MQ=60)
                                          TCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGC                                                    >  SRR4302541.590486/1‑94 (MQ=60)
                                            TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                                                  <  SRR4302541.4896867/94‑1 (MQ=60)
                                            TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                                                  >  SRR4302541.3998450/1‑94 (MQ=60)
                                            TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                                                  >  SRR4302541.5403626/1‑94 (MQ=60)
                                            TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                                                  <  SRR4302541.5153022/94‑1 (MQ=60)
                                            TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                                                  <  SRR4302541.7214798/94‑1 (MQ=60)
                                            TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                                                  >  SRR4302541.2322955/1‑94 (MQ=60)
                                             TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                                                 <  SRR4302541.5764331/94‑1 (MQ=60)
                                             TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                                                 <  SRR4302541.3786355/94‑1 (MQ=60)
                                             TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCCGCCTTCGTTTTTATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                                                 >  SRR4302541.1569739/1‑94 (MQ=60)
                                              TACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGC                                                >  SRR4302541.348775/1‑94 (MQ=60)
                                               ACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                                               >  SRR4302541.3657988/1‑94 (MQ=60)
                                               ACCATTTCTGTAAGAAATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                                               <  SRR4302541.1575893/94‑1 (MQ=60)
                                                CCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTTCTGCCTTCGTTTTCATCACTGTGTTTTGATTATAGCGCGGCGATGACAGCCTGCGG                                              >  SRR4302541.352292/1‑94 (MQ=56)
                                                CCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTG                                              >  SRR4302541.3300115/1‑94 (MQ=60)
                                                 CATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGT                                             <  SRR4302541.6436009/94‑1 (MQ=60)
                                                 CATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGT                                             >  SRR4302541.8578918/1‑94 (MQ=60)
                                                  ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                                            >  SRR4302541.8135702/1‑94 (MQ=60)
                                                  ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                                            >  SRR4302541.7420766/1‑94 (MQ=60)
                                                  ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                                            <  SRR4302541.4269942/94‑1 (MQ=60)
                                                  ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                                            <  SRR4302541.7341410/94‑1 (MQ=60)
                                                   TTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTC                                           <  SRR4302541.7551362/94‑1 (MQ=60)
                                                   TTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTC                                           <  SRR4302541.3527588/94‑1 (MQ=60)
                                                     TCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAA                                         <  SRR4302541.1258008/94‑1 (MQ=60)
                                                     TCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAA                                         >  SRR4302541.546153/1‑94 (MQ=60)
                                                     TCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGAATTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAA                                         <  SRR4302541.5937962/94‑1 (MQ=60)
                                                      CTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAT                                        <  SRR4302541.555491/94‑1 (MQ=60)
                                                       TGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGTCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCCATC                                       >  SRR4302541.2600561/1‑94 (MQ=60)
                                                        GTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCA                                      >  SRR4302541.6184362/1‑94 (MQ=60)
                                                        GTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCA                                      >  SRR4302541.4594155/1‑94 (MQ=60)
                                                         TAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAG                                     >  SRR4302541.4048402/1‑94 (MQ=60)
                                                          AAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT                                    <  SRR4302541.863751/94‑1 (MQ=60)
                                                           AGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT                                   >  SRR4302541.3691748/1‑94 (MQ=60)
                                                           AGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT                                   >  SRR4302541.8079886/1‑94 (MQ=60)
                                                            GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT                                  >  SRR4302541.5567850/1‑94 (MQ=60)
                                                            GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT                                  <  SRR4302541.3053526/94‑1 (MQ=60)
                                                            GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT                                  >  SRR4302541.6535182/1‑94 (MQ=60)
                                                            GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT                                  >  SRR4302541.3031407/1‑94 (MQ=60)
                                                            GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT                                  <  SRR4302541.2775186/94‑1 (MQ=60)
                                                            GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT                                  >  SRR4302541.8335656/1‑94 (MQ=60)
                                                            GAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTT                                  >  SRR4302541.8244465/1‑94 (MQ=60)
                                                             AGATAAAAAAGGCCGGAGCCTGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGAGCGGCGATAACAGCCTGCTGTTCAATCTGTTTC                                 >  SRR4302541.6652671/1‑94 (MQ=60)
                                                             AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 >  SRR4302541.2575868/1‑94 (MQ=60)
                                                             AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 >  SRR4302541.2575867/1‑94 (MQ=60)
                                                             AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 <  SRR4302541.8836662/94‑1 (MQ=60)
                                                             AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 >  SRR4302541.7760863/1‑94 (MQ=60)
                                                             AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 >  SRR4302541.4161177/1‑94 (MQ=60)
                                                             AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 >  SRR4302541.5369492/1‑94 (MQ=60)
                                                             AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 >  SRR4302541.4161176/1‑94 (MQ=60)
                                                              GATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCG                                <  SRR4302541.7470465/94‑1 (MQ=60)
                                                                  AAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT                             >  SRR4302541.8221716/1‑94 (MQ=60)
                                                                  AAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT                             >  SRR4302541.2496277/1‑94 (MQ=60)
                                                                  AAAAAAGGCCGGAGCATGCCCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT                             <  SRR4302541.1569930/94‑1 (MQ=60)
                                                                   AACAAGGCCGGAGCATGCTCCGGCCTTCGTTTTAATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTT                            <  SRR4302541.4753934/94‑1 (MQ=60)
                                                                   AAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTT                            <  SRR4302541.5286399/94‑1 (MQ=60)
                                                                   AAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTT                            >  SRR4302541.1905508/1‑94 (MQ=60)
                                                                     AAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG                          >  SRR4302541.8833971/1‑94 (MQ=60)
                                                                     AAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG                          >  SRR4302541.3595710/1‑94 (MQ=60)
                                                                      AAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGT                         >  SRR4302541.5915804/1‑94 (MQ=60)
                                                                      AAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGC                         >  SRR4302541.4781910/1‑94 (MQ=60)
                                                                      AAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGC                         >  SRR4302541.5922685/1‑94 (MQ=60)
                                                                       AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT                        <  SRR4302541.36212/94‑1 (MQ=60)
                                                                       AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT                        <  SRR4302541.7690673/94‑1 (MQ=60)
                                                                       AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACACACTGCTGTTCAATCAGTTTCGCTTTCGCT                        >  SRR4302541.3171718/1‑94 (MQ=60)
                                                                         GCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTC                      >  SRR4302541.1069973/1‑94 (MQ=60)
                                                                         GCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTC                      >  SRR4302541.6000350/1‑94 (MQ=60)
                                                                          CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     >  SRR4302541.759365/1‑94 (MQ=60)
                                                                          CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     >  SRR4302541.445906/1‑94 (MQ=60)
                                                                          CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     >  SRR4302541.3387666/1‑94 (MQ=60)
                                                                          CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     <  SRR4302541.8492780/94‑1 (MQ=60)
                                                                          CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     <  SRR4302541.8204120/94‑1 (MQ=60)
                                                                           CGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCG                    >  SRR4302541.4553773/1‑94 (MQ=60)
                                                                           CGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCG                    <  SRR4302541.7017670/94‑1 (MQ=60)
                                                                           CGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCC                    >  SRR4302541.2616249/1‑94 (MQ=60)
                                                                            GGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACATCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGC                   <  SRR4302541.4838920/94‑1 (MQ=60)
                                                                               AGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACCGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAT                 >  SRR4302541.6229931/1‑94 (MQ=60)
                                                                                GCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATA                <  SRR4302541.1775256/94‑1 (MQ=60)
                                                                                 CATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAG               <  SRR4302541.5762101/94‑1 (MQ=60)
                                                                                 CATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAG               >  SRR4302541.973262/1‑94 (MQ=60)
                                                                                 CATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAG               >  SRR4302541.371372/1‑94 (MQ=60)
                                                                                 CATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAG               >  SRR4302541.7827300/1‑94 (MQ=60)
                                                                                 CATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAG               >  SRR4302541.140065/1‑94 (MQ=60)
                                                                                   TGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCCCATAGCT             >  SRR4302541.3429378/1‑94 (MQ=60)
                                                                                   TGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTACGCATAGCC             >  SRR4302541.7114434/1‑94 (MQ=60)
                                                                                    GCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCT            <  SRR4302541.8396764/94‑1 (MQ=60)
                                                                                    GCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCT            >  SRR4302541.5466606/1‑94 (MQ=60)
                                                                                     CTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAGAGCCGGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTT           >  SRR4302541.5381893/1‑94 (MQ=60)
                                                                                      TCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTC          <  SRR4302541.1249861/94‑1 (MQ=60)
                                                                                         CGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA        >  SRR4302541.5450641/1‑94 (MQ=60)
                                                                                         CGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA        >  SRR4302541.2909550/1‑94 (MQ=60)
                                                                                         CGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA        <  SRR4302541.5817613/94‑1 (MQ=60)
                                                                                         CGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA        >  SRR4302541.793731/1‑94 (MQ=60)
                                                                                          GGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTACGCTTTCGCTTCCGCATAGCCTTCCAG       >  SRR4302541.2094808/1‑94 (MQ=60)
                                                                                           GCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGC      >  SRR4302541.3371406/1‑94 (MQ=60)
                                                                                            CCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCT     >  SRR4302541.8536394/1‑94 (MQ=60)
                                                                                            CCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCT     >  SRR4302541.1599800/1‑94 (MQ=60)
                                                                                            CCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCT     >  SRR4302541.2632859/1‑94 (MQ=60)
                                                                                            CCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCT     >  SRR4302541.902702/1‑94 (MQ=60)
                                                                                            CCTTCGTTTTCATCACTGTGATTTGATTACAGCGCGGCGATAACAGACTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAGAGCCTTCCAGCT     >  SRR4302541.5038744/1‑94 (MQ=60)
                                                                                             CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    >  SRR4302541.7452651/1‑94 (MQ=60)
                                                                                             CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    >  SRR4302541.4750514/1‑94 (MQ=60)
                                                                                             CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    >  SRR4302541.3213784/1‑94 (MQ=60)
                                                                                             CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    <  SRR4302541.1636915/94‑1 (MQ=60)
                                                                                                TCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCT  <  SRR4302541.6125844/94‑1 (MQ=60)
                                                                                                |                                                                                             
GATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCT  >  NC_000913/4478432‑4478620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: